Belongs to the UPP synthase family
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g10500 |
| malus_domestica | MD02G1118100.v1.1 MD02G1118400.v1.1 |
| prunus_persica | Prupe.7G181300_v2.0.a1 |
| pyrus_communis | pycom02g09170 pycom02g09180 pycom15g20710 |
| rosa_chinensis | RchiOBHm_Chr2g0097361 |
| rosa_laevigata | RLG00000016720 |
| rosa_multiflora | Rmu_sc0001060.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00144740 |
| rosa_rugosa | Rorug02G0066000 |
| rosa_samantha | Rh2AG112800 Rh2BG115600 Rh2CG117800 Rh2DG116800 |
| rosa_wichuraiana | Rw2G008830 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 3 cut(s) | 604, 1049, 1268 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 61 |
| AccI | GTMKAC | 2 cut(s) | 333, 1341 |
| AciI | CCGC | 4 cut(s) | 235, 727, 873, 894 |
| AclWI | GGATC | 4 cut(s) | 352, 605, 1064, 1077 |
| AcoI | YGGCCR | 1 cut(s) | 710 |
| AcsI | RAATTY | 2 cut(s) | 423, 530 |
| AcuI | CTGAAG | 3 cut(s) | 196, 618, 1139 |
| AfaI | GTAC | 4 cut(s) | 170, 364, 593, 692 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 61, 125, 719, 1262 |
| AflII | CTTAAG | 1 cut(s) | 649 |
| AflIII | ACRYGT | 2 cut(s) | 508, 594 |
| AgsI | TTSAA | 5 cut(s) | 229, 395, 965, 1192, 1292 |
| AjnI | CCWGG | 3 cut(s) | 124, 1018, 1065 |
| AluBI | AGCT | 3 cut(s) | 553, 1118, 1143 |
| AluI | AGCT | 3 cut(s) | 553, 1118, 1143 |
| Alw21I | GWGCWC | 1 cut(s) | 433 |
| Alw26I | GTCTC | 4 cut(s) | 153, 635, 909, 1218 |
| AlwI | GGATC | 4 cut(s) | 352, 605, 1064, 1077 |
| AoxI | GGCC | 6 cut(s) | 127, 236, 454, 710, 1327, 1367 |
| ApeKI | GCWGC | 2 cut(s) | 550, 701 |
| ApoI | RAATTY | 2 cut(s) | 423, 530 |
| AspLEI | GCGC | 1 cut(s) | 1188 |
| AspS9I | GGNCC | 5 cut(s) | 116, 237, 455, 1016, 1327 |
| AsuHPI | GGTGA | 4 cut(s) | 259, 650, 917, 1349 |
| AsuII | TTCGAA | 2 cut(s) | 628, 1100 |
| AvaII | GGWCC | 2 cut(s) | 116, 1016 |
| BamHI | GGATCC | 1 cut(s) | 1069 |
| BanI | GGYRCC | 3 cut(s) | 604, 1049, 1268 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 575, 607 |
| Bbv12I | GWGCWC | 1 cut(s) | 433 |
| BbvI | GCAGC | 2 cut(s) | 562, 688 |
| BccI | CCATC | 3 cut(s) | 253, 939, 1142 |
| BciT130I | CCWGG | 3 cut(s) | 126, 1020, 1067 |
| BcoDI | GTCTC | 4 cut(s) | 153, 635, 909, 1218 |
| BfaI | CTAG | 2 cut(s) | 536, 813 |
| BfmI | CTRYAG | 1 cut(s) | 1215 |
| BfrI | CTTAAG | 1 cut(s) | 649 |
| BisI | GCNGC | 5 cut(s) | 236, 551, 702, 728, 894 |
| BlsI | GCNGC | 5 cut(s) | 237, 552, 703, 729, 895 |
| Bme1390I | CCNGG | 3 cut(s) | 126, 1020, 1067 |
| Bme18I | GGWCC | 2 cut(s) | 116, 1016 |
| BmgT120I | GGNCC | 5 cut(s) | 116, 237, 455, 1016, 1327 |
| BmiI | GGNNCC | 7 cut(s) | 117, 118, 606, 1051, 1071, 1270, 1328 |
| BmrFI | CCNGG | 3 cut(s) | 126, 1020, 1067 |
| BmsI | GCATC | 1 cut(s) | 799 |
| Bpu14I | TTCGAA | 2 cut(s) | 628, 1100 |
| BpuEI | CTTGAG | 3 cut(s) | 314, 923, 1104 |
| Bsa29I | ATCGAT | 2 cut(s) | 347, 1093 |
| BsaAI | YACGTR | 1 cut(s) | 1300 |
| BsaJI | CCNNGG | 1 cut(s) | 822 |
| BsaWI | WCCGGW | 2 cut(s) | 165, 986 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 61, 125, 719, 1262 |
| Bse118I | RCCGGY | 1 cut(s) | 1271 |
| Bse1I | ACTGG | 2 cut(s) | 316, 1370 |
| Bse3DI | GCAATG | 1 cut(s) | 469 |
| BseBI | CCWGG | 3 cut(s) | 126, 1020, 1067 |
| BseCI | ATCGAT | 2 cut(s) | 347, 1093 |
| BseDI | CCNNGG | 1 cut(s) | 822 |
| BseGI | GGATG | 3 cut(s) | 580, 1136, 1252 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 61, 125, 719, 1262 |
| BseMI | GCAATG | 1 cut(s) | 469 |
| BseMII | CTCAG | 2 cut(s) | 74, 1336 |
| BseNI | ACTGG | 2 cut(s) | 316, 1370 |
| BseRI | GAGGAG | 2 cut(s) | 497, 869 |
| BseXI | GCAGC | 2 cut(s) | 562, 688 |
| BsgI | GTGCAG | 1 cut(s) | 687 |
| BshFI | GGCC | 6 cut(s) | 129, 238, 456, 712, 1329, 1369 |
| BshNI | GGYRCC | 3 cut(s) | 604, 1049, 1268 |
| BshVI | ATCGAT | 2 cut(s) | 347, 1093 |
| BsiHKAI | GWGCWC | 1 cut(s) | 433 |
| BsiSI | CCGG | 5 cut(s) | 138, 166, 713, 987, 1272 |
| BslFI | GGGAC | 3 cut(s) | 102, 928, 1294 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 61, 125, 719, 1262 |
| BsmAI | GTCTC | 4 cut(s) | 153, 635, 909, 1218 |
| BsmFI | GGGAC | 3 cut(s) | 102, 928, 1294 |
| BsmI | GAATGC | 1 cut(s) | 324 |
| BsnI | GGCC | 6 cut(s) | 129, 238, 456, 712, 1329, 1369 |
| Bsp119I | TTCGAA | 2 cut(s) | 628, 1100 |
| Bsp1286I | GDGCHC | 1 cut(s) | 433 |
| Bsp1407I | TGTACA | 1 cut(s) | 591 |
| Bsp143I | GATC | 8 cut(s) | 344, 348, 610, 1069, 1094, 1176, 1249, 1318 |
| Bsp19I | CCATGG | 1 cut(s) | 822 |
| BspACI | CCGC | 4 cut(s) | 235, 727, 873, 894 |
| BspANI | GGCC | 6 cut(s) | 129, 238, 456, 712, 1329, 1369 |
| BspCNI | CTCAG | 2 cut(s) | 75, 1335 |
| BspDI | ATCGAT | 2 cut(s) | 347, 1093 |
| BspLI | GGNNCC | 7 cut(s) | 117, 118, 606, 1051, 1071, 1270, 1328 |
| BspPI | GGATC | 4 cut(s) | 352, 605, 1064, 1077 |
| BspT104I | TTCGAA | 2 cut(s) | 628, 1100 |
| BspT107I | GGYRCC | 3 cut(s) | 604, 1049, 1268 |
| BspTI | CTTAAG | 1 cut(s) | 649 |
| BsrDI | GCAATG | 1 cut(s) | 469 |
| BsrFI | RCCGGY | 1 cut(s) | 1271 |
| BsrGI | TGTACA | 1 cut(s) | 591 |
| BsrI | ACTGG | 2 cut(s) | 316, 1370 |
| BssAI | RCCGGY | 1 cut(s) | 1271 |
| BssECI | CCNNGG | 1 cut(s) | 822 |
| BssMI | GATC | 8 cut(s) | 344, 348, 610, 1069, 1094, 1176, 1249, 1318 |
| BssNAI | GTATAC | 1 cut(s) | 334 |
| BssT1I | CCWWGG | 1 cut(s) | 822 |
| Bst1107I | GTATAC | 1 cut(s) | 334 |
| Bst2UI | CCWGG | 3 cut(s) | 126, 1020, 1067 |
| Bst4CI | ACNGT | 8 cut(s) | 17, 202, 708, 923, 1054, 1081, 1132, 1336 |
| BstAFI | CTTAAG | 1 cut(s) | 649 |
| BstAUI | TGTACA | 1 cut(s) | 591 |
| BstBAI | YACGTR | 1 cut(s) | 1300 |
| BstBI | TTCGAA | 2 cut(s) | 628, 1100 |
| BstC8I | GCNNGC | 1 cut(s) | 52 |
| BstDEI | CTNAG | 5 cut(s) | 83, 900, 1144, 1173, 1322 |
| BstDSI | CCRYGG | 1 cut(s) | 822 |
| BstF5I | GGATG | 3 cut(s) | 580, 1136, 1252 |
| BstHHI | GCGC | 1 cut(s) | 1188 |
| BstKTI | GATC | 8 cut(s) | 347, 351, 613, 1072, 1097, 1179, 1252, 1321 |
| BstMAI | GTCTC | 4 cut(s) | 153, 635, 909, 1218 |
| BstMBI | GATC | 8 cut(s) | 344, 348, 610, 1069, 1094, 1176, 1249, 1318 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 818 |
| BstNI | CCWGG | 3 cut(s) | 126, 1020, 1067 |
| BstNSI | RCATGY | 3 cut(s) | 512, 598, 1231 |
| BstSCI | CCNGG | 3 cut(s) | 124, 1018, 1065 |
| BstSFI | CTRYAG | 1 cut(s) | 1215 |
| BstV1I | GCAGC | 2 cut(s) | 562, 688 |
| BstX2I | RGATCY | 1 cut(s) | 1069 |
| BstYI | RGATCY | 1 cut(s) | 1069 |
| BstZ17I | GTATAC | 1 cut(s) | 334 |
| Bsu15I | ATCGAT | 2 cut(s) | 347, 1093 |
| BsuRI | GGCC | 6 cut(s) | 129, 238, 456, 712, 1329, 1369 |
| BsuTUI | ATCGAT | 2 cut(s) | 347, 1093 |
| BtgI | CCRYGG | 1 cut(s) | 822 |
| BtsCI | GGATG | 3 cut(s) | 580, 1136, 1252 |
| BtsIMutI | CAGTG | 5 cut(s) | 22, 106, 606, 704, 1173 |
| Cac8I | GCNNGC | 1 cut(s) | 52 |
| CfoI | GCGC | 1 cut(s) | 1188 |
| Cfr10I | RCCGGY | 1 cut(s) | 1271 |
| Cfr13I | GGNCC | 5 cut(s) | 116, 237, 455, 1016, 1327 |
| ClaI | ATCGAT | 2 cut(s) | 347, 1093 |
| Csp6I | GTAC | 4 cut(s) | 169, 363, 592, 691 |
| CviAII | CATG | 7 cut(s) | 154, 386, 509, 595, 823, 917, 1228 |
| CviQI | GTAC | 4 cut(s) | 169, 363, 592, 691 |
| DdeI | CTNAG | 5 cut(s) | 83, 900, 1144, 1173, 1322 |
| DpnI | GATC | 8 cut(s) | 346, 350, 612, 1071, 1096, 1178, 1251, 1320 |
| DpnII | GATC | 8 cut(s) | 344, 348, 610, 1069, 1094, 1176, 1249, 1318 |
| EaeI | YGGCCR | 1 cut(s) | 710 |
| EciI | GGCGGA | 1 cut(s) | 862 |
| Eco130I | CCWWGG | 1 cut(s) | 822 |
| Eco47I | GGWCC | 2 cut(s) | 116, 1016 |
| Eco57I | CTGAAG | 3 cut(s) | 196, 618, 1139 |
| EcoO109I | RGGNCCY | 2 cut(s) | 116, 1327 |
| EcoRII | CCWGG | 3 cut(s) | 124, 1018, 1065 |
| EcoT14I | CCWWGG | 1 cut(s) | 822 |
| EcoT22I | ATGCAT | 1 cut(s) | 1233 |
| ErhI | CCWWGG | 1 cut(s) | 822 |
| FaeI | CATG | 7 cut(s) | 157, 389, 512, 598, 826, 920, 1231 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 276, 308 |
| FaqI | GGGAC | 3 cut(s) | 102, 928, 1294 |
| FatI | CATG | 7 cut(s) | 153, 385, 508, 594, 822, 916, 1227 |
| FauNDI | CATATG | 1 cut(s) | 1375 |
| FblI | GTMKAC | 2 cut(s) | 333, 1341 |
| Fnu4HI | GCNGC | 5 cut(s) | 236, 551, 702, 728, 894 |
| FokI | GGATG | 3 cut(s) | 587, 1123, 1239 |
| Fsp4HI | GCNGC | 5 cut(s) | 236, 551, 702, 728, 894 |
| FspBI | CTAG | 2 cut(s) | 536, 813 |
| GlaI | GCGC | 1 cut(s) | 1187 |
| GluI | GCNGC | 5 cut(s) | 236, 551, 702, 728, 894 |
| HaeIII | GGCC | 6 cut(s) | 129, 238, 456, 712, 1329, 1369 |
| HapII | CCGG | 5 cut(s) | 138, 166, 713, 987, 1272 |
| HhaI | GCGC | 1 cut(s) | 1188 |
| Hin1II | CATG | 7 cut(s) | 157, 389, 512, 598, 826, 920, 1231 |
| Hin6I | GCGC | 1 cut(s) | 1186 |
| HinP1I | GCGC | 1 cut(s) | 1186 |
| HinfI | GANTC | 3 cut(s) | 160, 398, 625 |
| HpaII | CCGG | 5 cut(s) | 138, 166, 713, 987, 1272 |
| HphI | GGTGA | 4 cut(s) | 259, 650, 917, 1349 |
| Hpy166II | GTNNAC | 3 cut(s) | 313, 334, 1342 |
| Hpy188I | TCNGA | 7 cut(s) | 84, 258, 344, 750, 1074, 1158, 1223 |
| Hpy188III | TCNNGA | 5 cut(s) | 229, 536, 614, 757, 806 |
| Hpy8I | GTNNAC | 3 cut(s) | 313, 334, 1342 |
| Hpy99I | CGWCG | 2 cut(s) | 245, 912 |
| HpyAV | CCTTC | 3 cut(s) | 220, 481, 518 |
| HpyCH4III | ACNGT | 8 cut(s) | 17, 202, 708, 923, 1054, 1081, 1132, 1336 |
| HpyCH4IV | ACGT | 2 cut(s) | 408, 1299 |
| HpyCH4V | TGCA | 7 cut(s) | 50, 271, 405, 462, 704, 1231, 1352 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 818 |
| HpyF3I | CTNAG | 5 cut(s) | 83, 900, 1144, 1173, 1322 |
| HpySE526I | ACGT | 2 cut(s) | 408, 1299 |
| Hsp92II | CATG | 7 cut(s) | 157, 389, 512, 598, 826, 920, 1231 |
| HspAI | GCGC | 1 cut(s) | 1186 |
| KflI | GGGWCCC | 1 cut(s) | 116 |
| Kzo9I | GATC | 8 cut(s) | 344, 348, 610, 1069, 1094, 1176, 1249, 1318 |
| Lsp1109I | GCAGC | 2 cut(s) | 562, 688 |
| LweI | GCATC | 1 cut(s) | 799 |
| MaeI | CTAG | 2 cut(s) | 536, 813 |
| MaeII | ACGT | 2 cut(s) | 408, 1299 |
| MaeIII | GTNAC | 6 cut(s) | 196, 923, 1081, 1132, 1300, 1378 |
| MalI | GATC | 8 cut(s) | 346, 350, 612, 1071, 1096, 1178, 1251, 1320 |
| MboI | GATC | 8 cut(s) | 344, 348, 610, 1069, 1094, 1176, 1249, 1318 |
| MboII | GAAGA | 7 cut(s) | 289, 407, 793, 845, 1089, 1204, 1380 |
| MfeI | CAATTG | 1 cut(s) | 45 |
| MflI | RGATCY | 1 cut(s) | 1069 |
| MhlI | GDGCHC | 1 cut(s) | 433 |
| MluCI | AATT | 7 cut(s) | 45, 223, 423, 530, 655, 744, 1276 |
| MmeI | TCCRAC | 1 cut(s) | 1201 |
| Mph1103I | ATGCAT | 1 cut(s) | 1233 |
| MseI | TTAA | 6 cut(s) | 282, 438, 504, 650, 1010, 1393 |
| MslI | CAYNNNNRTG | 3 cut(s) | 110, 599, 1166 |
| MspCI | CTTAAG | 1 cut(s) | 649 |
| MspI | CCGG | 5 cut(s) | 138, 166, 713, 987, 1272 |
| MspR9I | CCNGG | 3 cut(s) | 126, 1020, 1067 |
| MunI | CAATTG | 1 cut(s) | 45 |
| Mva1269I | GAATGC | 1 cut(s) | 324 |
| MvaI | CCWGG | 3 cut(s) | 126, 1020, 1067 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 818 |
| NcoI | CCATGG | 1 cut(s) | 822 |
| NdeI | CATATG | 1 cut(s) | 1375 |
| NdeII | GATC | 8 cut(s) | 344, 348, 610, 1069, 1094, 1176, 1249, 1318 |
| NlaIII | CATG | 7 cut(s) | 157, 389, 512, 598, 826, 920, 1231 |
| NlaIV | GGNNCC | 7 cut(s) | 117, 118, 606, 1051, 1071, 1270, 1328 |
| NmuCI | GTSAC | 5 cut(s) | 196, 923, 1081, 1132, 1300 |
| NsiI | ATGCAT | 1 cut(s) | 1233 |
| NspI | RCATGY | 3 cut(s) | 512, 598, 1231 |
| NspV | TTCGAA | 2 cut(s) | 628, 1100 |
| PciI | ACATGT | 2 cut(s) | 508, 594 |
| PctI | GAATGC | 1 cut(s) | 324 |
| PfeI | GAWTC | 3 cut(s) | 160, 398, 625 |
| PflFI | GACNNNGTC | 1 cut(s) | 1306 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 61 |
| PfoI | TCCNGGA | 1 cut(s) | 1065 |
| PkrI | GCNGC | 5 cut(s) | 237, 552, 703, 729, 895 |
| Ppu21I | YACGTR | 1 cut(s) | 1300 |
| PpuMI | RGGWCCY | 1 cut(s) | 116 |
| PscI | ACATGT | 2 cut(s) | 508, 594 |
| Psp5II | RGGWCCY | 1 cut(s) | 116 |
| Psp6I | CCWGG | 3 cut(s) | 124, 1018, 1065 |
| PspGI | CCWGG | 3 cut(s) | 124, 1018, 1065 |
| PspN4I | GGNNCC | 7 cut(s) | 117, 118, 606, 1051, 1071, 1270, 1328 |
| PspPI | GGNCC | 5 cut(s) | 116, 237, 455, 1016, 1327 |
| PspPPI | RGGWCCY | 1 cut(s) | 116 |
| PsuI | RGATCY | 1 cut(s) | 1069 |
| PsyI | GACNNNGTC | 1 cut(s) | 1306 |
| RsaI | GTAC | 4 cut(s) | 170, 364, 593, 692 |
| RsaNI | GTAC | 4 cut(s) | 169, 363, 592, 691 |
| RseI | CAYNNNNRTG | 3 cut(s) | 110, 599, 1166 |
| SaqAI | TTAA | 6 cut(s) | 282, 438, 504, 650, 1010, 1393 |
| SatI | GCNGC | 5 cut(s) | 236, 551, 702, 728, 894 |
| Sau3AI | GATC | 8 cut(s) | 344, 348, 610, 1069, 1094, 1176, 1249, 1318 |
| Sau96I | GGNCC | 5 cut(s) | 116, 237, 455, 1016, 1327 |
| ScrFI | CCNGG | 3 cut(s) | 126, 1020, 1067 |
| SduI | GDGCHC | 1 cut(s) | 433 |
| SfaNI | GCATC | 1 cut(s) | 799 |
| SfcI | CTRYAG | 1 cut(s) | 1215 |
| SfuI | TTCGAA | 2 cut(s) | 628, 1100 |
| SinI | GGWCC | 2 cut(s) | 116, 1016 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 110, 599, 1166 |
| SmlI | CTYRAG | 4 cut(s) | 293, 649, 938, 1119 |
| SmoI | CTYRAG | 4 cut(s) | 293, 649, 938, 1119 |
| Sse9I | AATT | 7 cut(s) | 45, 223, 423, 530, 655, 744, 1276 |
| SsiI | CCGC | 4 cut(s) | 235, 727, 873, 894 |
| SspMI | CTAG | 2 cut(s) | 536, 813 |
| StyD4I | CCNGG | 3 cut(s) | 124, 1018, 1065 |
| StyI | CCWWGG | 1 cut(s) | 822 |
| TaaI | ACNGT | 8 cut(s) | 17, 202, 708, 923, 1054, 1081, 1132, 1336 |
| TaiI | ACGT | 2 cut(s) | 411, 1302 |
| TaqI | TCGA | 7 cut(s) | 158, 347, 427, 628, 1093, 1100, 1317 |
| TasI | AATT | 7 cut(s) | 45, 223, 423, 530, 655, 744, 1276 |
| TatI | WGTACW | 3 cut(s) | 362, 591, 690 |
| TauI | GCSGC | 3 cut(s) | 238, 730, 896 |
| TfiI | GAWTC | 3 cut(s) | 160, 398, 625 |
| Tru1I | TTAA | 6 cut(s) | 282, 438, 504, 650, 1010, 1393 |
| Tru9I | TTAA | 6 cut(s) | 282, 438, 504, 650, 1010, 1393 |
| TscAI | CASTG | 5 cut(s) | 22, 106, 606, 711, 1173 |
| TseFI | GTSAC | 5 cut(s) | 196, 923, 1081, 1132, 1300 |
| TseI | GCWGC | 2 cut(s) | 550, 701 |
| Tsp45I | GTSAC | 5 cut(s) | 196, 923, 1081, 1132, 1300 |
| TspDTI | ATGAA | 1 cut(s) | 537 |
| TspGWI | ACGGA | 1 cut(s) | 456 |
| TspRI | CASTG | 5 cut(s) | 22, 106, 606, 711, 1173 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1306 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 61 |
| Vha464I | CTTAAG | 1 cut(s) | 649 |
| VpaK11BI | GGWCC | 2 cut(s) | 116, 1016 |
| XapI | RAATTY | 2 cut(s) | 423, 530 |
| XbaI | TCTAGA | 1 cut(s) | 535 |
| XceI | RCATGY | 3 cut(s) | 512, 598, 1231 |
| XmiI | GTMKAC | 2 cut(s) | 333, 1341 |
| XspI | CTAG | 2 cut(s) | 536, 813 |
| Zsp2I | ATGCAT | 1 cut(s) | 1233 |