pycom02g09530

Thiosulfate sulfurtransferase 16

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
6596448 .. 6598374
1927 bp
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UTR
Exon/CDS
Intron
pycom02g09530.2

Sequence Viewer

Length: 546 bp
ATGGTGGCGATTTCGTTTGTGTATTCTTCTTGCTTTACTGGCTCCGCTGCAATTCAACCCCCTTCGCTTTTTTCTGCTCAAAATCTCAACCACAAATCTTCGCTTTCTCTAAACGGGAAGAGACTCGGCACTGGACTCCATAACAAGAACTTCAACTTCTGTGTGAAAGCTGCTCAGGAGAGAAATTTGGAGGCTGTGGGAGTCCCAACTTCGGTGCCGGTTCGTGTGGCACATGAGCTTCTTCAAGCTGGACACAAATATTTGGATGTCAGGACTCCTGAGGAGTTCAGTGCAGGACATGCCCCTGGGGCTGTCAACATTCCCTACTTGTACAAAGTTGGATCAGGGATGTCAAAGAACCAAGAATTTCTAGAACAAGTGTCATCACATTTCAGAAAGCATGATGAGATTATAGTTGGATGCCAGCTTGGGAAAAGATCGATGATGGCTGCAACTGATCTTGTAGCTGCTGGTTTCACTGGCATTACAGATATAGCTGGTGGGTATGCTGCTTGGACACAGACTGGACTTCCAACAGAGATATGA

Protein Analysis

182

Amino Acids

19.4

Weight (kDa)

8.46

Isoelectric Point (pI)

39.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 214
AciI CCGC 1 cut(s) 45
AclWI GGATC 1 cut(s) 349
AcsI RAATTY 2 cut(s) 184, 365
AfaI GTAC 1 cut(s) 332
AfiI CCNNNNNNNGG 1 cut(s) 211
AgsI TTSAA 3 cut(s) 56, 154, 245
AjnI CCWGG 1 cut(s) 304
AluBI AGCT 6 cut(s) 170, 238, 248, 427, 467, 497
AluI AGCT 6 cut(s) 170, 238, 248, 427, 467, 497
Alw26I GTCTC 1 cut(s) 115
AlwI GGATC 1 cut(s) 349
ApeKI GCWGC 5 cut(s) 47, 170, 449, 467, 509
ApoI RAATTY 2 cut(s) 184, 365
AxyI CCTNAGG 1 cut(s) 279
BanI GGYRCC 1 cut(s) 214
BbvI GCAGC 5 cut(s) 34, 157, 436, 454, 496
BccI CCATC 1 cut(s) 439
BciT130I CCWGG 1 cut(s) 306
BcoDI GTCTC 1 cut(s) 115
BfaI CTAG 1 cut(s) 371
BglI GCCNNNNNGGC 1 cut(s) 308
BisI GCNGC 5 cut(s) 48, 171, 450, 468, 510
BlsI GCNGC 5 cut(s) 49, 172, 451, 469, 511
Bme1390I CCNGG 1 cut(s) 306
BmiI GGNNCC 2 cut(s) 43, 216
BmrFI CCNGG 1 cut(s) 306
BmsI GCATC 1 cut(s) 410
Bpu10I CCTNAGC 1 cut(s) 174
Bsa29I ATCGAT 1 cut(s) 440
BsaJI CCNNGG 2 cut(s) 304, 305
Bsc4I CCNNNNNNNGG 1 cut(s) 211
Bse118I RCCGGY 1 cut(s) 217
Bse1I ACTGG 4 cut(s) 43, 136, 484, 529
Bse21I CCTNAGG 1 cut(s) 279
BseBI CCWGG 1 cut(s) 306
BseCI ATCGAT 1 cut(s) 440
BseDI CCNNGG 2 cut(s) 304, 305
BseGI GGATG 3 cut(s) 271, 354, 425
BseLI CCNNNNNNNGG 1 cut(s) 211
BseMII CTCAG 2 cut(s) 188, 270
BseNI ACTGG 4 cut(s) 43, 136, 484, 529
BseRI GAGGAG 1 cut(s) 296
BseXI GCAGC 5 cut(s) 34, 157, 436, 454, 496
BsgI GTGCAG 1 cut(s) 312
BshNI GGYRCC 1 cut(s) 214
BshVI ATCGAT 1 cut(s) 440
BsiSI CCGG 1 cut(s) 218
BslFI GGGAC 1 cut(s) 188
BslI CCNNNNNNNGG 1 cut(s) 211
BsmAI GTCTC 1 cut(s) 115
BsmFI GGGAC 1 cut(s) 188
Bsp1407I TGTACA 1 cut(s) 330
Bsp143I GATC 3 cut(s) 341, 437, 457
BspACI CCGC 1 cut(s) 45
BspCNI CTCAG 2 cut(s) 187, 271
BspDI ATCGAT 1 cut(s) 440
BspLI GGNNCC 2 cut(s) 43, 216
BspPI GGATC 1 cut(s) 349
BspT107I GGYRCC 1 cut(s) 214
BsrFI RCCGGY 1 cut(s) 217
BsrGI TGTACA 1 cut(s) 330
BsrI ACTGG 4 cut(s) 43, 136, 484, 529
BssAI RCCGGY 1 cut(s) 217
BssECI CCNNGG 2 cut(s) 304, 305
BssMI GATC 3 cut(s) 341, 437, 457
Bst2UI CCWGG 1 cut(s) 306
Bst6I CTCTTC 1 cut(s) 113
BstAPI GCANNNNNTGC 1 cut(s) 299
BstAUI TGTACA 1 cut(s) 330
BstC8I GCNNGC 1 cut(s) 425
BstDEI CTNAG 2 cut(s) 174, 279
BstF5I GGATG 3 cut(s) 271, 354, 425
BstKTI GATC 3 cut(s) 344, 440, 460
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 3 cut(s) 341, 437, 457
BstMWI GCNNNNNNNGC 3 cut(s) 39, 299, 308
BstNI CCWGG 1 cut(s) 306
BstNSI RCATGY 1 cut(s) 302
BstSCI CCNGG 1 cut(s) 304
BstV1I GCAGC 5 cut(s) 34, 157, 436, 454, 496
Bsu15I ATCGAT 1 cut(s) 440
Bsu36I CCTNAGG 1 cut(s) 279
BsuTUI ATCGAT 1 cut(s) 440
BtsCI GGATG 3 cut(s) 271, 354, 425
BtsIMutI CAGTG 3 cut(s) 129, 295, 477
Cac8I GCNNGC 1 cut(s) 425
Cfr10I RCCGGY 1 cut(s) 217
ClaI ATCGAT 1 cut(s) 440
Csp6I GTAC 1 cut(s) 331
CviAII CATG 3 cut(s) 233, 299, 401
CviQI GTAC 1 cut(s) 331
DdeI CTNAG 2 cut(s) 174, 279
DpnI GATC 3 cut(s) 343, 439, 459
DpnII GATC 3 cut(s) 341, 437, 457
Eam1104I CTCTTC 1 cut(s) 113
EarI CTCTTC 1 cut(s) 113
Eco81I CCTNAGG 1 cut(s) 279
EcoRII CCWGG 1 cut(s) 304
FaeI CATG 3 cut(s) 236, 302, 404
FaiI YATR 8 cut(s) 141, 234, 300, 402, 413, 494, 507, 544
FaqI GGGAC 1 cut(s) 188
FatI CATG 3 cut(s) 232, 298, 400
Fnu4HI GCNGC 5 cut(s) 48, 171, 450, 468, 510
FokI GGATG 3 cut(s) 278, 361, 432
Fsp4HI GCNGC 5 cut(s) 48, 171, 450, 468, 510
FspBI CTAG 1 cut(s) 371
GluI GCNGC 5 cut(s) 48, 171, 450, 468, 510
HapII CCGG 1 cut(s) 218
Hin1II CATG 3 cut(s) 236, 302, 404
HincII GTYRAC 1 cut(s) 316
HindII GTYRAC 1 cut(s) 316
HinfI GANTC 4 cut(s) 123, 135, 201, 274
HpaII CCGG 1 cut(s) 218
Hpy166II GTNNAC 1 cut(s) 316
Hpy188I TCNGA 1 cut(s) 395
Hpy188III TCNNGA 4 cut(s) 176, 271, 278, 371
Hpy8I GTNNAC 1 cut(s) 316
HpyAV CCTTC 1 cut(s) 72
HpyCH4V TGCA 3 cut(s) 50, 293, 452
HpyF10VI GCNNNNNNNGC 3 cut(s) 39, 299, 308
HpyF3I CTNAG 2 cut(s) 174, 279
Hsp92II CATG 3 cut(s) 236, 302, 404
Kzo9I GATC 3 cut(s) 341, 437, 457
LmnI GCTCC 1 cut(s) 47
Lsp1109I GCAGC 5 cut(s) 34, 157, 436, 454, 496
LweI GCATC 1 cut(s) 410
MaeI CTAG 1 cut(s) 371
MalI GATC 3 cut(s) 343, 439, 459
MboI GATC 3 cut(s) 341, 437, 457
MboII GAAGA 4 cut(s) 18, 90, 130, 233
MluCI AATT 3 cut(s) 51, 184, 365
MlyI GAGTC 4 cut(s) 117, 129, 210, 268
MmeI TCCRAC 2 cut(s) 319, 397
MnlI CCTC 2 cut(s) 184, 274
MspA1I CMGCKG 1 cut(s) 47
MspI CCGG 1 cut(s) 218
MspR9I CCNGG 1 cut(s) 306
MvaI CCWGG 1 cut(s) 306
MwoI GCNNNNNNNGC 3 cut(s) 39, 299, 308
NdeII GATC 3 cut(s) 341, 437, 457
NlaIII CATG 3 cut(s) 236, 302, 404
NlaIV GGNNCC 2 cut(s) 43, 216
NmeAIII GCCGAG 1 cut(s) 105
NspI RCATGY 1 cut(s) 302
PasI CCCWGGG 1 cut(s) 305
PkrI GCNGC 5 cut(s) 49, 172, 451, 469, 511
PleI GAGTC 4 cut(s) 117, 129, 209, 268
PpsI GAGTC 4 cut(s) 117, 129, 209, 268
Psp6I CCWGG 1 cut(s) 304
PspGI CCWGG 1 cut(s) 304
PspN4I GGNNCC 2 cut(s) 43, 216
RsaI GTAC 1 cut(s) 332
RsaNI GTAC 1 cut(s) 331
SatI GCNGC 5 cut(s) 48, 171, 450, 468, 510
Sau3AI GATC 3 cut(s) 341, 437, 457
SchI GAGTC 4 cut(s) 117, 129, 210, 268
ScrFI CCNGG 1 cut(s) 306
SetI ASST 6 cut(s) 172, 240, 250, 429, 469, 499
SfaNI GCATC 1 cut(s) 410
Sse9I AATT 3 cut(s) 51, 184, 365
SsiI CCGC 1 cut(s) 45
SspI AATATT 1 cut(s) 260
SspMI CTAG 1 cut(s) 371
StyD4I CCNGG 1 cut(s) 304
TaqI TCGA 1 cut(s) 440
TasI AATT 3 cut(s) 51, 184, 365
TatI WGTACW 1 cut(s) 330
TscAI CASTG 3 cut(s) 136, 295, 484
TseI GCWGC 5 cut(s) 47, 170, 449, 467, 509
TspRI CASTG 3 cut(s) 136, 295, 484
XapI RAATTY 2 cut(s) 184, 365
XbaI TCTAGA 1 cut(s) 370
XceI RCATGY 1 cut(s) 302
XspI CTAG 1 cut(s) 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.