Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G66930 AT5G66930 AT5G66930 |
| fragaria_vesca | FvH4_1g14960 FvH4_1g14960 FvH4_1g14960 |
| malus_domestica | MD02G1163200.v1.1 MD15G1276200.v1.1 |
| prunus_persica | Prupe.7G140800_v2.0.a1 Prupe.7G140800_v2.0.a1 |
| pyrus_communis | pycom02g12940 pycom15g23930 |
| rosa_chinensis | RchiOBHm_Chr2g0104011 |
| rosa_laevigata | RLG00000017277 |
| rosa_multiflora | Rmu_sc0001720.1_g000010 |
| rosa_roxburghii | Rroxscaffold_2G00139210 |
| rosa_rugosa | Rorug02G0118400 Rorug02G0118500 Rorug02G0118600 |
| rosa_samantha | Rh2AG167900 Rh2BG174900 Rh2CG173700 Rh2DG173400 |
| rosa_wichuraiana | Rw2G013130 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 115, 165 |
| AclWI | GGATC | 1 cut(s) | 404 |
| AcsI | RAATTY | 1 cut(s) | 343 |
| AgsI | TTSAA | 3 cut(s) | 176, 272, 349 |
| AjnI | CCWGG | 1 cut(s) | 412 |
| AleI | CACNNNNGTG | 1 cut(s) | 86 |
| AluBI | AGCT | 1 cut(s) | 22 |
| AluI | AGCT | 1 cut(s) | 22 |
| Alw21I | GWGCWC | 1 cut(s) | 45 |
| AlwI | GGATC | 1 cut(s) | 404 |
| AoxI | GGCC | 1 cut(s) | 116 |
| ApeKI | GCWGC | 1 cut(s) | 69 |
| ApoI | RAATTY | 1 cut(s) | 343 |
| AspLEI | GCGC | 1 cut(s) | 69 |
| AspS9I | GGNCC | 1 cut(s) | 117 |
| AsuII | TTCGAA | 1 cut(s) | 144 |
| Bbv12I | GWGCWC | 1 cut(s) | 45 |
| BbvI | GCAGC | 1 cut(s) | 56 |
| BciT130I | CCWGG | 1 cut(s) | 414 |
| BisI | GCNGC | 2 cut(s) | 70, 116 |
| BlsI | GCNGC | 2 cut(s) | 71, 117 |
| Bme1390I | CCNGG | 1 cut(s) | 414 |
| BmgT120I | GGNCC | 1 cut(s) | 117 |
| BmrFI | CCNGG | 1 cut(s) | 414 |
| BmrI | ACTGGG | 1 cut(s) | 334 |
| BmuI | ACTGGG | 1 cut(s) | 334 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 427, 459 |
| Bpu14I | TTCGAA | 1 cut(s) | 144 |
| BpuEI | CTTGAG | 1 cut(s) | 200 |
| Bsa29I | ATCGAT | 1 cut(s) | 452 |
| Bse1I | ACTGG | 1 cut(s) | 329 |
| Bse3DI | GCAATG | 1 cut(s) | 167 |
| BseBI | CCWGG | 1 cut(s) | 414 |
| BseCI | ATCGAT | 1 cut(s) | 452 |
| BseMI | GCAATG | 1 cut(s) | 167 |
| BseNI | ACTGG | 1 cut(s) | 329 |
| BseXI | GCAGC | 1 cut(s) | 56 |
| BshFI | GGCC | 1 cut(s) | 118 |
| BshVI | ATCGAT | 1 cut(s) | 452 |
| BsiHKAI | GWGCWC | 1 cut(s) | 45 |
| BsnI | GGCC | 1 cut(s) | 118 |
| Bsp119I | TTCGAA | 1 cut(s) | 144 |
| Bsp1286I | GDGCHC | 1 cut(s) | 45 |
| Bsp143I | GATC | 3 cut(s) | 409, 449, 453 |
| BspACI | CCGC | 2 cut(s) | 115, 165 |
| BspANI | GGCC | 1 cut(s) | 118 |
| BspDI | ATCGAT | 1 cut(s) | 452 |
| BspPI | GGATC | 1 cut(s) | 404 |
| BspT104I | TTCGAA | 1 cut(s) | 144 |
| BsrDI | GCAATG | 1 cut(s) | 167 |
| BsrI | ACTGG | 1 cut(s) | 329 |
| BssMI | GATC | 3 cut(s) | 409, 449, 453 |
| Bst2UI | CCWGG | 1 cut(s) | 414 |
| Bst4CI | ACNGT | 1 cut(s) | 8 |
| BstBI | TTCGAA | 1 cut(s) | 144 |
| BstC8I | GCNNGC | 2 cut(s) | 20, 445 |
| BstHHI | GCGC | 1 cut(s) | 69 |
| BstKTI | GATC | 3 cut(s) | 412, 452, 456 |
| BstMBI | GATC | 3 cut(s) | 409, 449, 453 |
| BstNI | CCWGG | 1 cut(s) | 414 |
| BstSCI | CCNGG | 1 cut(s) | 412 |
| BstV1I | GCAGC | 1 cut(s) | 56 |
| Bsu15I | ATCGAT | 1 cut(s) | 452 |
| BsuRI | GGCC | 1 cut(s) | 118 |
| BsuTUI | ATCGAT | 1 cut(s) | 452 |
| Cac8I | GCNNGC | 2 cut(s) | 20, 445 |
| CfoI | GCGC | 1 cut(s) | 69 |
| Cfr13I | GGNCC | 1 cut(s) | 117 |
| ClaI | ATCGAT | 1 cut(s) | 452 |
| CviJI | RGCY | 5 cut(s) | 22, 101, 118, 289, 443 |
| CviKI_1 | RGCY | 5 cut(s) | 22, 101, 118, 289, 443 |
| DpnI | GATC | 3 cut(s) | 411, 451, 455 |
| DpnII | GATC | 3 cut(s) | 409, 449, 453 |
| EcoRII | CCWGG | 1 cut(s) | 412 |
| FaiI | YATR | 7 cut(s) | 74, 154, 156, 322, 339, 341, 390 |
| FauNDI | CATATG | 1 cut(s) | 154 |
| Fnu4HI | GCNGC | 2 cut(s) | 70, 116 |
| Fsp4HI | GCNGC | 2 cut(s) | 70, 116 |
| GlaI | GCGC | 1 cut(s) | 68 |
| GluI | GCNGC | 2 cut(s) | 70, 116 |
| HaeIII | GGCC | 1 cut(s) | 118 |
| HhaI | GCGC | 1 cut(s) | 69 |
| Hin6I | GCGC | 1 cut(s) | 67 |
| HinP1I | GCGC | 1 cut(s) | 67 |
| Hpy166II | GTNNAC | 1 cut(s) | 300 |
| Hpy8I | GTNNAC | 1 cut(s) | 300 |
| HpyCH4III | ACNGT | 1 cut(s) | 8 |
| HpyCH4V | TGCA | 3 cut(s) | 72, 160, 425 |
| HspAI | GCGC | 1 cut(s) | 67 |
| Kzo9I | GATC | 3 cut(s) | 409, 449, 453 |
| LpnPI | CCDG | 5 cut(s) | 32, 236, 310, 399, 426 |
| Lsp1109I | GCAGC | 1 cut(s) | 56 |
| MaeIII | GTNAC | 1 cut(s) | 352 |
| MalI | GATC | 3 cut(s) | 411, 451, 455 |
| MboI | GATC | 3 cut(s) | 409, 449, 453 |
| MboII | GAAGA | 1 cut(s) | 211 |
| MfeI | CAATTG | 1 cut(s) | 84 |
| MhlI | GDGCHC | 1 cut(s) | 45 |
| MluCI | AATT | 7 cut(s) | 29, 84, 147, 209, 292, 343, 391 |
| MslI | CAYNNNNRTG | 1 cut(s) | 86 |
| MspR9I | CCNGG | 1 cut(s) | 414 |
| MunI | CAATTG | 1 cut(s) | 84 |
| MvaI | CCWGG | 1 cut(s) | 414 |
| NdeI | CATATG | 1 cut(s) | 154 |
| NdeII | GATC | 3 cut(s) | 409, 449, 453 |
| NmuCI | GTSAC | 1 cut(s) | 352 |
| NspV | TTCGAA | 1 cut(s) | 144 |
| OliI | CACNNNNGTG | 1 cut(s) | 86 |
| PfoI | TCCNGGA | 1 cut(s) | 412 |
| PkrI | GCNGC | 2 cut(s) | 71, 117 |
| Psp6I | CCWGG | 1 cut(s) | 412 |
| PspGI | CCWGG | 1 cut(s) | 412 |
| PspPI | GGNCC | 1 cut(s) | 117 |
| RseI | CAYNNNNRTG | 1 cut(s) | 86 |
| SatI | GCNGC | 2 cut(s) | 70, 116 |
| Sau3AI | GATC | 3 cut(s) | 409, 449, 453 |
| Sau96I | GGNCC | 1 cut(s) | 117 |
| ScrFI | CCNGG | 1 cut(s) | 414 |
| SduI | GDGCHC | 1 cut(s) | 45 |
| SetI | ASST | 3 cut(s) | 24, 255, 320 |
| SfuI | TTCGAA | 1 cut(s) | 144 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 86 |
| SmlI | CTYRAG | 1 cut(s) | 179 |
| SmoI | CTYRAG | 1 cut(s) | 179 |
| Sse9I | AATT | 7 cut(s) | 29, 84, 147, 209, 292, 343, 391 |
| SsiI | CCGC | 2 cut(s) | 115, 165 |
| StyD4I | CCNGG | 1 cut(s) | 412 |
| TaaI | ACNGT | 1 cut(s) | 8 |
| TaqI | TCGA | 3 cut(s) | 39, 144, 452 |
| TasI | AATT | 7 cut(s) | 29, 84, 147, 209, 292, 343, 391 |
| TauI | GCSGC | 1 cut(s) | 118 |
| TseFI | GTSAC | 1 cut(s) | 352 |
| TseI | GCWGC | 1 cut(s) | 69 |
| Tsp45I | GTSAC | 1 cut(s) | 352 |
| TspDTI | ATGAA | 3 cut(s) | 17, 83, 202 |
| XapI | RAATTY | 1 cut(s) | 343 |