Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0011728

Physical Location & Seq

Genomic Coordinates Forward (+)

10962449 .. 10962901

Gene Structure 453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g14370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 453 bp

ATGGCATCAACCATGTCTCTCGCCATGTTCACCATCCTCTTCCTCTCCTTCACCCTCTCACAGGCCTCCCCGATTGTCGGCTCTCGGAGCGAGGCCGACGTCAGAGCCATCTACCAAGAGTGGCTCGTGAAGCACCAGAAAACATACAACGGCATCGGGGAGGAGGAGAGGAGGTTCGAGATCTTCAAGGACAACTTGAAGTTCATCGACGAGCATAACGCACTGGACCGTCCGTACAAGGTCGGTCTGAATGCTTTCGCTGACCTGACCAACCAGGAGTACCGTGCCAAGTTTTTGGGCACCAGGAGTGACCCTAAGCGCAGGGTCATGAAGGCCAAGAAGCCGAGCCTGAGGTACGCTTTTCGCGCCGGCGAGACGTTGCCGGAATCTGTGGATTGGAGAGTCAAGGGTGCCGTCAATCCCATCAAAAATCAAGGAAGTTGCGGTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0003674 GO:0003824 GO:0004175 GO:0004197 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005773 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008234 GO:0009056 GO:0009057 GO:0009987 GO:0016787 GO:0019538 GO:0030163 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044421 GO:0044424 GO:0044444 GO:0044464 GO:0051603 GO:0070011 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04140 ko04142 ko04145 ko04210 ko04612 ko05205 ko05323 ko05418 map04140 map04142 map04145 map04210 map04612 map05205 map05323 map05418

Pfam Domains

Protein Families

Inhibitor_I29 Peptidase_C1

Protein Analysis

151

Amino Acids

17.14

Weight (kDa)

9.52

Isoelectric Point (pI)

41.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I29	PF08246	38 - 94	1e-19	Cathepsin propeptide inhibitor domain (I29)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0011728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19400 AT3G19400
fragaria_vesca	FvH4_1g16530
malus_domestica	MD02G1177700.v1.1 MD15G1287500.v1.1
prunus_persica	Prupe.6G230400_v2.0.a1 Prupe.6G230400_v2.0.a1
pyrus_communis	pycom02g14370 pycom15g25110
rosa_chinensis	RchiOBHm_Chr2g0106431
rosa_laevigata	RLG00000017497
rosa_multiflora	Rmu_sc0004015.1_g000003
rosa_roxburghii	Rroxscaffold_2G00137190
rosa_rugosa	Rorug02G0135300
rosa_samantha	Rh2AG186600 Rh2BG196900 Rh2CG191600 Rh2DG192700
rosa_wichuraiana	Rw2G014540

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	102
AccB1I	GGYRCC	2 cut(s)	299, 410
AccII	CGCG	1 cut(s)	366
AciI	CCGC	1 cut(s)	444
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	3 cut(s)	236, 281, 356
AfiI	CCNNNNNNNGG	2 cut(s)	61, 77
AgsI	TTSAA	2 cut(s)	187, 199
AjnI	CCWGG	2 cut(s)	273, 302
AloI	GAACNNNNNNTCC	2 cut(s)	158, 190
Alw26I	GTCTC	2 cut(s)	21, 368
AoxI	GGCC	3 cut(s)	63, 93, 333
Asp700I	GAANNNNTTC	1 cut(s)	254
AspLEI	GCGC	2 cut(s)	321, 368
AspS9I	GGNCC	1 cut(s)	226
AsuHPI	GGTGA	2 cut(s)	22, 43
AvaII	GGWCC	1 cut(s)	226
AxyI	CCTNAGG	1 cut(s)	350
BaeGI	GKGCMC	1 cut(s)	302
BanI	GGYRCC	2 cut(s)	299, 410
BauI	CACGAG	1 cut(s)	125
BccI	CCATC	3 cut(s)	41, 116, 431
BceAI	ACGGC	2 cut(s)	166, 398
BciT130I	CCWGG	2 cut(s)	275, 304
BcoDI	GTCTC	2 cut(s)	21, 368
BglII	AGATCT	1 cut(s)	180
Bme1390I	CCNGG	2 cut(s)	275, 304
Bme18I	GGWCC	1 cut(s)	226
BmgT120I	GGNCC	1 cut(s)	226
BmiI	GGNNCC	2 cut(s)	301, 412
BmrFI	CCNGG	2 cut(s)	275, 304
BmsI	GCATC	2 cut(s)	14, 162
Bpu10I	CCTNAGC	1 cut(s)	315
BsaHI	GRCGYC	1 cut(s)	99
BsaXI	ACNNNNNCTCC	2 cut(s)	158, 188
Bsc4I	CCNNNNNNNGG	2 cut(s)	61, 77
Bse118I	RCCGGY	1 cut(s)	368
Bse1I	ACTGG	1 cut(s)	228
Bse21I	CCTNAGG	1 cut(s)	350
BseBI	CCWGG	2 cut(s)	275, 304
BseGI	GGATG	1 cut(s)	33
BseLI	CCNNNNNNNGG	2 cut(s)	61, 77
BseMII	CTCAG	1 cut(s)	341
BseNI	ACTGG	1 cut(s)	228
BseRI	GAGGAG	3 cut(s)	176, 179, 184
BseSI	GKGCMC	1 cut(s)	302
Bsh1236I	CGCG	1 cut(s)	366
BshFI	GGCC	3 cut(s)	65, 95, 335
BshNI	GGYRCC	2 cut(s)	299, 410
BsiSI	CCGG	2 cut(s)	369, 383
BslI	CCNNNNNNNGG	2 cut(s)	61, 77
BsmAI	GTCTC	2 cut(s)	21, 368
BsmBI	CGTCTC	1 cut(s)	368
BsmI	GAATGC	1 cut(s)	256
BsnI	GGCC	3 cut(s)	65, 95, 335
Bsp1286I	GDGCHC	1 cut(s)	302
Bsp143I	GATC	1 cut(s)	180
BspACI	CCGC	1 cut(s)	444
BspANI	GGCC	3 cut(s)	65, 95, 335
BspCNI	CTCAG	1 cut(s)	342
BspFNI	CGCG	1 cut(s)	366
BspHI	TCATGA	1 cut(s)	327
BspLI	GGNNCC	2 cut(s)	301, 412
BspT107I	GGYRCC	2 cut(s)	299, 410
BsrFI	RCCGGY	1 cut(s)	368
BsrI	ACTGG	1 cut(s)	228
BssAI	RCCGGY	1 cut(s)	368
BssMI	GATC	1 cut(s)	180
BssNI	GRCGYC	1 cut(s)	99
BssSI	CACGAG	1 cut(s)	125
Bst2BI	CACGAG	1 cut(s)	125
Bst2UI	CCWGG	2 cut(s)	275, 304
Bst4CI	ACNGT	2 cut(s)	230, 284
Bst6I	CTCTTC	1 cut(s)	44
BstACI	GRCGYC	1 cut(s)	99
BstC8I	GCNNGC	1 cut(s)	370
BstDEI	CTNAG	2 cut(s)	315, 350
BstENI	CCTNNNNNAGG	1 cut(s)	59
BstF5I	GGATG	1 cut(s)	33
BstFNI	CGCG	1 cut(s)	366
BstHHI	GCGC	2 cut(s)	321, 368
BstKTI	GATC	1 cut(s)	183
BstMAI	GTCTC	2 cut(s)	21, 368
BstMBI	GATC	1 cut(s)	180
BstMWI	GCNNNNNNNGC	3 cut(s)	87, 130, 365
BstNI	CCWGG	2 cut(s)	275, 304
BstSCI	CCNGG	2 cut(s)	273, 302
BstSLI	GKGCMC	1 cut(s)	302
BstUI	CGCG	1 cut(s)	366
BstX2I	RGATCY	1 cut(s)	180
BstXI	CCANNNNNNTGG	1 cut(s)	295
BstYI	RGATCY	1 cut(s)	180
Bsu36I	CCTNAGG	1 cut(s)	350
BsuRI	GGCC	3 cut(s)	65, 95, 335
BtsCI	GGATG	1 cut(s)	33
BtsIMutI	CAGTG	1 cut(s)	221
Cac8I	GCNNGC	1 cut(s)	370
CciI	TCATGA	1 cut(s)	327
CfoI	GCGC	2 cut(s)	321, 368
Cfr10I	RCCGGY	1 cut(s)	368
Cfr13I	GGNCC	1 cut(s)	226
Csp6I	GTAC	3 cut(s)	235, 280, 355
CviAII	CATG	3 cut(s)	13, 25, 328
CviJI	RGCY	8 cut(s)	65, 81, 95, 107, 124, 335, 343, 348
CviKI_1	RGCY	8 cut(s)	65, 81, 95, 107, 124, 335, 343, 348
CviQI	GTAC	3 cut(s)	235, 280, 355
DdeI	CTNAG	2 cut(s)	315, 350
DpnI	GATC	1 cut(s)	182
DpnII	GATC	1 cut(s)	180
Eam1104I	CTCTTC	1 cut(s)	44
EarI	CTCTTC	1 cut(s)	44
Eco147I	AGGCCT	1 cut(s)	65
Eco47I	GGWCC	1 cut(s)	226
Eco81I	CCTNAGG	1 cut(s)	350
EcoNI	CCTNNNNNAGG	1 cut(s)	59
EcoRII	CCWGG	2 cut(s)	273, 302
Esp3I	CGTCTC	1 cut(s)	368
FaeI	CATG	3 cut(s)	16, 28, 331
FaiI	YATR	5 cut(s)	14, 26, 145, 216, 329
FalI	AAGNNNNNCTT	2 cut(s)	179, 211
FatI	CATG	3 cut(s)	12, 24, 327
FokI	GGATG	1 cut(s)	20
GlaI	GCGC	2 cut(s)	320, 367
HaeIII	GGCC	3 cut(s)	65, 95, 335
HapII	CCGG	2 cut(s)	369, 383
HhaI	GCGC	2 cut(s)	321, 368
Hin1I	GRCGYC	1 cut(s)	99
Hin1II	CATG	3 cut(s)	16, 28, 331
Hin6I	GCGC	2 cut(s)	319, 366
HinP1I	GCGC	2 cut(s)	319, 366
HinfI	GANTC	2 cut(s)	386, 402
HpaII	CCGG	2 cut(s)	369, 383
HphI	GGTGA	2 cut(s)	22, 43
Hpy166II	GTNNAC	1 cut(s)	30
Hpy188I	TCNGA	3 cut(s)	87, 104, 249
Hpy188III	TCNNGA	3 cut(s)	127, 178, 328
Hpy8I	GTNNAC	1 cut(s)	30
Hpy99I	CGWCG	2 cut(s)	101, 212
HpyAV	CCTTC	2 cut(s)	58, 325
HpyCH4III	ACNGT	2 cut(s)	230, 284
HpyCH4IV	ACGT	2 cut(s)	99, 377
HpyF10VI	GCNNNNNNNGC	3 cut(s)	87, 130, 365
HpyF3I	CTNAG	2 cut(s)	315, 350
HpySE526I	ACGT	2 cut(s)	99, 377
Hsp92I	GRCGYC	1 cut(s)	99
Hsp92II	CATG	3 cut(s)	16, 28, 331
HspAI	GCGC	2 cut(s)	319, 366
KroI	GCCGGC	1 cut(s)	368
KroNI	GCCGGC	1 cut(s)	370
Kzo9I	GATC	1 cut(s)	180
LmnI	GCTCC	1 cut(s)	87
LweI	GCATC	2 cut(s)	14, 162
MaeII	ACGT	2 cut(s)	99, 377
MaeIII	GTNAC	1 cut(s)	308
MalI	GATC	1 cut(s)	182
MboI	GATC	1 cut(s)	180
MboII	GAAGA	2 cut(s)	31, 175
MflI	RGATCY	1 cut(s)	180
MhlI	GDGCHC	1 cut(s)	302
MlyI	GAGTC	1 cut(s)	411
MreI	CGCCGGCG	1 cut(s)	368
MroNI	GCCGGC	1 cut(s)	368
MroXI	GAANNNNTTC	1 cut(s)	254
MspI	CCGG	2 cut(s)	369, 383
MspR9I	CCNGG	2 cut(s)	275, 304
Mva1269I	GAATGC	1 cut(s)	256
MvaI	CCWGG	2 cut(s)	275, 304
MvnI	CGCG	1 cut(s)	366
MwoI	GCNNNNNNNGC	3 cut(s)	87, 130, 365
NaeI	GCCGGC	1 cut(s)	370
NdeII	GATC	1 cut(s)	180
NgoMIV	GCCGGC	1 cut(s)	368
NlaIII	CATG	3 cut(s)	16, 28, 331
NlaIV	GGNNCC	2 cut(s)	301, 412
NmeAIII	GCCGAG	1 cut(s)	369
NmuCI	GTSAC	1 cut(s)	308
PagI	TCATGA	1 cut(s)	327
PceI	AGGCCT	1 cut(s)	65
PctI	GAATGC	1 cut(s)	256
PdiI	GCCGGC	1 cut(s)	370
PdmI	GAANNNNTTC	1 cut(s)	254
PfeI	GAWTC	1 cut(s)	386
PleI	GAGTC	1 cut(s)	410
PpsI	GAGTC	1 cut(s)	410
Psp6I	CCWGG	2 cut(s)	273, 302
PspGI	CCWGG	2 cut(s)	273, 302
PspN4I	GGNNCC	2 cut(s)	301, 412
PspPI	GGNCC	1 cut(s)	226
PsuI	RGATCY	1 cut(s)	180
RsaI	GTAC	3 cut(s)	236, 281, 356
RsaNI	GTAC	3 cut(s)	235, 280, 355
Sau3AI	GATC	1 cut(s)	180
Sau96I	GGNCC	1 cut(s)	226
SchI	GAGTC	1 cut(s)	411
ScrFI	CCNGG	2 cut(s)	275, 304
SduI	GDGCHC	1 cut(s)	302
SetI	ASST	6 cut(s)	102, 176, 243, 267, 356, 380
SfaNI	GCATC	2 cut(s)	14, 162
SgrAI	CRCCGGYG	1 cut(s)	368
SinI	GGWCC	1 cut(s)	226
SseBI	AGGCCT	1 cut(s)	65
SsiI	CCGC	1 cut(s)	444
StuI	AGGCCT	1 cut(s)	65
StyD4I	CCNGG	2 cut(s)	273, 302
TaaI	ACNGT	2 cut(s)	230, 284
TaiI	ACGT	2 cut(s)	102, 380
TaqI	TCGA	2 cut(s)	177, 207
TaqII	GACCGA	1 cut(s)	233
TfiI	GAWTC	1 cut(s)	386
TscAI	CASTG	1 cut(s)	228
TseFI	GTSAC	1 cut(s)	308
Tsp45I	GTSAC	1 cut(s)	308
TspDTI	ATGAA	2 cut(s)	193, 344
TspGWI	ACGGA	1 cut(s)	222
TspRI	CASTG	1 cut(s)	228
VpaK11BI	GGWCC	1 cut(s)	226
XagI	CCTNNNNNAGG	1 cut(s)	59
XmnI	GAANNNNTTC	1 cut(s)	254
ZraI	GACGTC	1 cut(s)	100

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.