RH2AG186600

Belongs to the peptidase C1 family

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG186600.1

Sequence Viewer

Length: 1146 bp
ATGTACACCATCACTTGGGAGAAAAACACCAACAAACCCCAAACCTGTCTCTCAAGACTCACCCACACTTTCTCCTCAACCATGTCAACCACCATGACCCTAACCCTCTTCAGCCTCCTCTTCCTCTCCTTCACCCTCTCCCACGCCTCCAGCCTCCGCACCGAGGCTGAGGTCCGGGAGCTCTACCAGCACTGGCTGGTCAAGCACCAGAAAGTCTACAACGGCATCGGAGAGGAGGAGACCAGGTTCCAGATCTTCAAGGACAACTTGAAGTTCGTTGATGAGCACAACGCTGAGAACAGGTCCTACAAGGTTGGCTTGAATGCCTTTGCCGACTTGACCAACCAGGAGTACCGGGCCAAGTTTCTCGGCACCCGCTCCGACCCCAAGAGGAGGATCATGAAGGCCAAGAAACCTAGCCTCAGGTACGCTGTGCGCCCCGATGACAAGTTGCCGGAATCCGTGGACTGGAGAGCCTTGGGGGCTGTTAATCCGATCAAAAACCAAGGCAGCTGCGGAAGTTGCTGGGCATTTTCAACAGTGGCTGCAGTGGAAGGCATAAACATGATAACCACAGGAGAACTAGTCTCTCTCTCAGAGCAAGAGCTTGTTGACTGCGACAGGACTTACAACGCTGGCTGCAATGGAGGCCTTATGGACTACGCCTTTGAGTTCATCATCAAAAACGGTGGCATGGACACTGAATCAGACTACCCTTACAAAGCAGTTGACCAACAGTGTGACGTTTCTTTGGAGAGCAACAAGGTTGTTACCATTGATGGGTATGAAGATGTTCCAGCATTCAATGAGGAAGCTTTGAAGAAAGCTGTGGCACATCAACCTGTAAGTGTTGCCATTGAAGCTGGTGGCATGGCTCTTCAGCTTTATGATTCGGGTGTGTTTACCGGTGAATGTGGATCAGCACTGGATCATGGTGTGGTTGCTGTTGGGTATGGCACAGAGAATGGTGTGGACTACTGGCTCGTGAGGAACTCATGGGGAACCAACTGGGGTGAGAGTGGATATTTCAAGATGGAGCGCAATGTGAAGAGCATATATACTGGCAAGTGTGGTATTGCCATGGAGGCTTCTTACCCAACCAAGGATAGTGCACAAAACCCAATCCAGATGGTCACCAGCATGTGA

Protein Analysis

381

Amino Acids

42.49

Weight (kDa)

5.41

Isoelectric Point (pI)

29.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 62 - 118 2.7e-19 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 151 - 367 1.2e-86 Papain family cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011728)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 371
AccB7I CCANNNNNTGG 1 cut(s) 15
AccBSI CCGCTC 1 cut(s) 378
AccI GTMKAC 1 cut(s) 216
AciI CCGC 3 cut(s) 157, 376, 516
AclWI GGATC 3 cut(s) 404, 925, 936
AcuI CTGAAG 2 cut(s) 94, 863
AfaI GTAC 3 cut(s) 5, 353, 428
AfiI CCNNNNNNNGG 6 cut(s) 15, 163, 393, 468, 780, 1102
AgeI ACCGGT 1 cut(s) 905
AgsI TTSAA 8 cut(s) 259, 271, 322, 537, 805, 820, 860, 1030
AhlI ACTAGT 1 cut(s) 583
AjnI CCWGG 2 cut(s) 242, 345
AloI GAACNNNNNNTCC 2 cut(s) 230, 262
AluBI AGCT 7 cut(s) 181, 513, 607, 815, 827, 863, 883
AluI AGCT 7 cut(s) 181, 513, 607, 815, 827, 863, 883
Alw21I GWGCWC 3 cut(s) 183, 288, 1114
Alw26I GTCTC 3 cut(s) 53, 233, 592
Alw44I GTGCAC 1 cut(s) 1110
AlwI GGATC 3 cut(s) 404, 925, 936
AlwNI CAGNNNCTG 1 cut(s) 545
AoxI GGCC 3 cut(s) 357, 405, 649
ApaLI GTGCAC 1 cut(s) 1110
ApeKI GCWGC 4 cut(s) 510, 513, 545, 639
ArsI GACNNNNNNTTYG 2 cut(s) 650, 682
AsiGI ACCGGT 1 cut(s) 905
Asp700I GAANNNNTTC 1 cut(s) 792
AspLEI GCGC 2 cut(s) 438, 1041
AspS9I GGNCC 3 cut(s) 172, 303, 357
AsuC2I CCSGG 2 cut(s) 176, 356
AsuHPI GGTGA 5 cut(s) 52, 124, 920, 1025, 1126
AvaII GGWCC 2 cut(s) 172, 303
AxyI CCTNAGG 1 cut(s) 422
BaeGI GKGCMC 1 cut(s) 1114
BanI GGYRCC 1 cut(s) 371
BanII GRGCYC 1 cut(s) 183
BauI CACGAG 1 cut(s) 983
Bbv12I GWGCWC 3 cut(s) 183, 288, 1114
BbvCI CCTCAGC 1 cut(s) 168
BbvI GCAGC 4 cut(s) 500, 522, 532, 626
BccI CCATC 4 cut(s) 17, 773, 1027, 1123
BceAI ACGGC 1 cut(s) 238
BciT130I CCWGG 2 cut(s) 244, 347
BcnI CCSGG 2 cut(s) 176, 356
BcoDI GTCTC 3 cut(s) 53, 233, 592
BcuI ACTAGT 1 cut(s) 583
BfaI CTAG 2 cut(s) 417, 584
BfmI CTRYAG 1 cut(s) 546
BglI GCCNNNNNGGC 2 cut(s) 482, 1085
BglII AGATCT 1 cut(s) 252
BisI GCNGC 4 cut(s) 511, 514, 546, 640
BlsI GCNGC 4 cut(s) 512, 515, 547, 641
Bme1390I CCNGG 4 cut(s) 176, 244, 347, 356
Bme18I GGWCC 2 cut(s) 172, 303
BmgT120I GGNCC 3 cut(s) 172, 303, 357
BmiI GGNNCC 3 cut(s) 248, 373, 1003
BmrFI CCNGG 4 cut(s) 176, 244, 347, 356
BmrI ACTGGG 1 cut(s) 1018
BmsI GCATC 1 cut(s) 234
BmuI ACTGGG 1 cut(s) 1018
BpmI CTGGAG 2 cut(s) 133, 490
Bpu10I CCTNAGC 1 cut(s) 168
BpuEI CTTGAG 1 cut(s) 37
BpuMI CCSGG 2 cut(s) 176, 356
BsaI GGTCTC 1 cut(s) 233
BsaJI CCNNGG 6 cut(s) 162, 462, 477, 505, 1080, 1101
BsaWI WCCGGW 1 cut(s) 905
BsaXI ACNNNNNCTCC 6 cut(s) 56, 86, 230, 260, 570, 600
Bsc4I CCNNNNNNNGG 6 cut(s) 15, 163, 393, 468, 780, 1102
Bse118I RCCGGY 1 cut(s) 905
Bse1I ACTGG 6 cut(s) 197, 473, 930, 983, 1013, 1066
Bse21I CCTNAGG 1 cut(s) 422
Bse3DI GCAATG 2 cut(s) 649, 1048
BseBI CCWGG 2 cut(s) 244, 347
BseDI CCNNGG 6 cut(s) 162, 462, 477, 505, 1080, 1101
BseLI CCNNNNNNNGG 6 cut(s) 15, 163, 393, 468, 780, 1102
BseMI GCAATG 2 cut(s) 649, 1048
BseMII CTCAG 4 cut(s) 159, 285, 436, 609
BseNI ACTGG 6 cut(s) 197, 473, 930, 983, 1013, 1066
BseRI GAGGAG 5 cut(s) 64, 107, 248, 251, 406
BseSI GKGCMC 1 cut(s) 1114
BseXI GCAGC 4 cut(s) 500, 522, 532, 626
BseYI CCCAGC 1 cut(s) 525
BshFI GGCC 3 cut(s) 359, 407, 651
BshNI GGYRCC 1 cut(s) 371
BshTI ACCGGT 1 cut(s) 905
BsiHKAI GWGCWC 3 cut(s) 183, 288, 1114
BsiSI CCGG 4 cut(s) 175, 355, 455, 906
BslI CCNNNNNNNGG 6 cut(s) 15, 163, 393, 468, 780, 1102
BsmAI GTCTC 3 cut(s) 53, 233, 592
BsmI GAATGC 2 cut(s) 328, 800
BsnI GGCC 3 cut(s) 359, 407, 651
Bso31I GGTCTC 1 cut(s) 233
Bsp1286I GDGCHC 3 cut(s) 183, 288, 1114
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 5 cut(s) 252, 396, 495, 917, 928
Bsp19I CCATGG 1 cut(s) 1080
BspACI CCGC 3 cut(s) 157, 376, 516
BspANI GGCC 3 cut(s) 359, 407, 651
BspCNI CTCAG 4 cut(s) 160, 286, 435, 608
BspHI TCATGA 1 cut(s) 399
BspLI GGNNCC 3 cut(s) 248, 373, 1003
BspMAI CTGCAG 1 cut(s) 550
BspPI GGATC 3 cut(s) 404, 925, 936
BspQI GCTCTTC 2 cut(s) 882, 1043
BspT107I GGYRCC 1 cut(s) 371
BspTNI GGTCTC 1 cut(s) 233
BsrBI CCGCTC 1 cut(s) 378
BsrDI GCAATG 2 cut(s) 649, 1048
BsrFI RCCGGY 1 cut(s) 905
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 6 cut(s) 197, 473, 930, 983, 1013, 1066
BssAI RCCGGY 1 cut(s) 905
BssECI CCNNGG 6 cut(s) 162, 462, 477, 505, 1080, 1101
BssMI GATC 5 cut(s) 252, 396, 495, 917, 928
BssSI CACGAG 1 cut(s) 983
BssT1I CCWWGG 4 cut(s) 477, 505, 1080, 1101
Bst2BI CACGAG 1 cut(s) 983
Bst2UI CCWGG 2 cut(s) 244, 347
Bst4CI ACNGT 3 cut(s) 541, 689, 738
Bst6I CTCTTC 4 cut(s) 113, 125, 882, 1043
BstAUI TGTACA 1 cut(s) 3
BstC8I GCNNGC 1 cut(s) 637
BstDEI CTNAG 4 cut(s) 168, 294, 422, 595
BstDSI CCRYGG 2 cut(s) 462, 1080
BstEII GGTNACC 1 cut(s) 1132
BstHHI GCGC 2 cut(s) 438, 1041
BstKTI GATC 5 cut(s) 255, 399, 498, 920, 931
BstMAI GTCTC 3 cut(s) 53, 233, 592
BstMBI GATC 5 cut(s) 252, 396, 495, 917, 928
BstMWI GCNNNNNNNGC 7 cut(s) 187, 202, 482, 522, 648, 860, 1085
BstNI CCWGG 2 cut(s) 244, 347
BstNSI RCATGY 1 cut(s) 1144
BstPI GGTNACC 1 cut(s) 1132
BstSCI CCNGG 4 cut(s) 174, 242, 345, 354
BstSFI CTRYAG 1 cut(s) 546
BstSLI GKGCMC 1 cut(s) 1114
BstV1I GCAGC 4 cut(s) 500, 522, 532, 626
BstX2I RGATCY 1 cut(s) 252
BstYI RGATCY 1 cut(s) 252
Bsu36I CCTNAGG 1 cut(s) 422
BsuRI GGCC 3 cut(s) 359, 407, 651
BtgI CCRYGG 2 cut(s) 462, 1080
BtsI GCAGTG 1 cut(s) 555
BtsIMutI CAGTG 6 cut(s) 190, 546, 555, 699, 743, 923
Cac8I GCNNGC 1 cut(s) 637
CaiI CAGNNNCTG 1 cut(s) 545
CciI TCATGA 1 cut(s) 399
CfoI GCGC 2 cut(s) 438, 1041
Cfr10I RCCGGY 1 cut(s) 905
Cfr13I GGNCC 3 cut(s) 172, 303, 357
CsiI ACCWGGT 1 cut(s) 242
Csp6I GTAC 3 cut(s) 4, 352, 427
CspAI ACCGGT 1 cut(s) 905
CspCI CAANNNNNGTGG 2 cut(s) 670, 705
CviQI GTAC 3 cut(s) 4, 352, 427
DdeI CTNAG 4 cut(s) 168, 294, 422, 595
DpnI GATC 5 cut(s) 254, 398, 497, 919, 930
DpnII GATC 5 cut(s) 252, 396, 495, 917, 928
Eam1104I CTCTTC 4 cut(s) 113, 125, 882, 1043
EarI CTCTTC 4 cut(s) 113, 125, 882, 1043
Ecl136II GAGCTC 1 cut(s) 181
Eco130I CCWWGG 4 cut(s) 477, 505, 1080, 1101
Eco147I AGGCCT 1 cut(s) 651
Eco24I GRGCYC 1 cut(s) 183
Eco31I GGTCTC 1 cut(s) 233
Eco47I GGWCC 2 cut(s) 172, 303
Eco53kI GAGCTC 1 cut(s) 181
Eco57I CTGAAG 2 cut(s) 94, 863
Eco81I CCTNAGG 1 cut(s) 422
Eco91I GGTNACC 1 cut(s) 1132
EcoICRI GAGCTC 1 cut(s) 181
EcoO109I RGGNCCY 1 cut(s) 303
EcoO65I GGTNACC 1 cut(s) 1132
EcoRII CCWGG 2 cut(s) 242, 345
EcoT14I CCWWGG 4 cut(s) 477, 505, 1080, 1101
EcoT38I GRGCYC 1 cut(s) 183
ErhI CCWWGG 4 cut(s) 477, 505, 1080, 1101
FalI AAGNNNNNCTT 4 cut(s) 251, 283, 302, 334
FauI CCCGC 1 cut(s) 383
FblI GTMKAC 1 cut(s) 216
Fnu4HI GCNGC 4 cut(s) 511, 514, 546, 640
FriOI GRGCYC 1 cut(s) 183
Fsp4HI GCNGC 4 cut(s) 511, 514, 546, 640
FspBI CTAG 2 cut(s) 417, 584
GlaI GCGC 2 cut(s) 437, 1040
GluI GCNGC 4 cut(s) 511, 514, 546, 640
GsaI CCCAGC 1 cut(s) 529
GsuI CTGGAG 2 cut(s) 133, 490
HaeIII GGCC 3 cut(s) 359, 407, 651
HapII CCGG 4 cut(s) 175, 355, 455, 906
HhaI GCGC 2 cut(s) 438, 1041
Hin6I GCGC 2 cut(s) 436, 1039
HinP1I GCGC 2 cut(s) 436, 1039
HincII GTYRAC 3 cut(s) 87, 613, 730
HindII GTYRAC 3 cut(s) 87, 613, 730
HindIII AAGCTT 1 cut(s) 813
HinfI GANTC 4 cut(s) 57, 458, 704, 890
HpaII CCGG 4 cut(s) 175, 355, 455, 906
HphI GGTGA 5 cut(s) 52, 124, 920, 1025, 1126
Hpy166II GTNNAC 9 cut(s) 6, 87, 217, 466, 613, 730, 903, 973, 1112
Hpy188I TCNGA 5 cut(s) 230, 382, 495, 598, 709
Hpy188III TCNNGA 6 cut(s) 54, 250, 400, 985, 1030, 1126
Hpy8I GTNNAC 9 cut(s) 6, 87, 217, 466, 613, 730, 903, 973, 1112
HpyAV CCTTC 3 cut(s) 139, 397, 548
HpyCH4III ACNGT 3 cut(s) 541, 689, 738
HpyCH4IV ACGT 1 cut(s) 744
HpyCH4V TGCA 3 cut(s) 548, 642, 1112
HpyF10VI GCNNNNNNNGC 7 cut(s) 187, 202, 482, 522, 648, 860, 1085
HpyF3I CTNAG 4 cut(s) 168, 294, 422, 595
HpySE526I ACGT 1 cut(s) 744
HspAI GCGC 2 cut(s) 436, 1039
Kzo9I GATC 5 cut(s) 252, 396, 495, 917, 928
LguI GCTCTTC 2 cut(s) 882, 1043
LmnI GCTCC 3 cut(s) 178, 383, 1036
Lsp1109I GCAGC 4 cut(s) 500, 522, 532, 626
LweI GCATC 1 cut(s) 234
MabI ACCWGGT 1 cut(s) 242
MaeI CTAG 2 cut(s) 417, 584
MaeII ACGT 1 cut(s) 744
MaeIII GTNAC 3 cut(s) 740, 769, 1132
MalI GATC 5 cut(s) 254, 398, 497, 919, 930
MbiI CCGCTC 1 cut(s) 378
MboI GATC 5 cut(s) 252, 396, 495, 917, 928
MboII GAAGA 7 cut(s) 100, 112, 247, 800, 832, 869, 1060
MflI RGATCY 1 cut(s) 252
MhlI GDGCHC 3 cut(s) 183, 288, 1114
MlyI GAGTC 1 cut(s) 51
MmeI TCCRAC 1 cut(s) 405
MroXI GAANNNNTTC 1 cut(s) 792
MseI TTAA 1 cut(s) 489
MslI CAYNNNNRTG 2 cut(s) 563, 1139
MspA1I CMGCKG 1 cut(s) 513
MspI CCGG 4 cut(s) 175, 355, 455, 906
MspR9I CCNGG 4 cut(s) 176, 244, 347, 356
Mva1269I GAATGC 2 cut(s) 328, 800
MvaI CCWGG 2 cut(s) 244, 347
MwoI GCNNNNNNNGC 7 cut(s) 187, 202, 482, 522, 648, 860, 1085
NciI CCSGG 2 cut(s) 176, 356
NcoI CCATGG 1 cut(s) 1080
NdeII GATC 5 cut(s) 252, 396, 495, 917, 928
NlaIV GGNNCC 3 cut(s) 248, 373, 1003
NmeAIII GCCGAG 1 cut(s) 348
NmuCI GTSAC 2 cut(s) 740, 1132
NspI RCATGY 1 cut(s) 1144
PagI TCATGA 1 cut(s) 399
PceI AGGCCT 1 cut(s) 651
PciSI GCTCTTC 2 cut(s) 882, 1043
PctI GAATGC 2 cut(s) 328, 800
PdmI GAANNNNTTC 1 cut(s) 792
PfeI GAWTC 3 cut(s) 458, 704, 890
PflMI CCANNNNNTGG 1 cut(s) 15
PfoI TCCNGGA 1 cut(s) 174
PinAI ACCGGT 1 cut(s) 905
PkrI GCNGC 4 cut(s) 512, 515, 547, 641
PleI GAGTC 1 cut(s) 51
PpsI GAGTC 1 cut(s) 51
PpuMI RGGWCCY 1 cut(s) 303
Psp124BI GAGCTC 1 cut(s) 183
Psp5II RGGWCCY 1 cut(s) 303
Psp6I CCWGG 2 cut(s) 242, 345
PspEI GGTNACC 1 cut(s) 1132
PspFI CCCAGC 1 cut(s) 525
PspGI CCWGG 2 cut(s) 242, 345
PspN4I GGNNCC 3 cut(s) 248, 373, 1003
PspPI GGNCC 3 cut(s) 172, 303, 357
PspPPI RGGWCCY 1 cut(s) 303
PsrI GAACNNNNNNTAC 2 cut(s) 290, 322
PstI CTGCAG 1 cut(s) 550
PstNI CAGNNNCTG 1 cut(s) 545
PsuI RGATCY 1 cut(s) 252
PvuII CAGCTG 1 cut(s) 513
RsaI GTAC 3 cut(s) 5, 353, 428
RsaNI GTAC 3 cut(s) 4, 352, 427
RseI CAYNNNNRTG 2 cut(s) 563, 1139
SacI GAGCTC 1 cut(s) 183
SapI GCTCTTC 2 cut(s) 882, 1043
SaqAI TTAA 1 cut(s) 489
SatI GCNGC 4 cut(s) 511, 514, 546, 640
Sau3AI GATC 5 cut(s) 252, 396, 495, 917, 928
Sau96I GGNCC 3 cut(s) 172, 303, 357
SchI GAGTC 1 cut(s) 51
ScrFI CCNGG 4 cut(s) 176, 244, 347, 356
SduI GDGCHC 3 cut(s) 183, 288, 1114
SexAI ACCWGGT 1 cut(s) 242
SfaNI GCATC 1 cut(s) 234
SfcI CTRYAG 1 cut(s) 546
SinI GGWCC 2 cut(s) 172, 303
SmiMI CAYNNNNRTG 2 cut(s) 563, 1139
SmlI CTYRAG 1 cut(s) 52
SmoI CTYRAG 1 cut(s) 52
SpeI ACTAGT 1 cut(s) 583
SseBI AGGCCT 1 cut(s) 651
SsiI CCGC 3 cut(s) 157, 376, 516
SspMI CTAG 2 cut(s) 417, 584
SstI GAGCTC 1 cut(s) 183
StuI AGGCCT 1 cut(s) 651
StyD4I CCNGG 4 cut(s) 174, 242, 345, 354
StyI CCWWGG 4 cut(s) 477, 505, 1080, 1101
TaaI ACNGT 3 cut(s) 541, 689, 738
TaiI ACGT 1 cut(s) 747
TatI WGTACW 1 cut(s) 3
TfiI GAWTC 3 cut(s) 458, 704, 890
Tru1I TTAA 1 cut(s) 489
Tru9I TTAA 1 cut(s) 489
TscAI CASTG 6 cut(s) 197, 546, 555, 706, 743, 930
TseFI GTSAC 2 cut(s) 740, 1132
TseI GCWGC 4 cut(s) 510, 513, 545, 639
Tsp45I GTSAC 2 cut(s) 740, 1132
TspDTI ATGAA 3 cut(s) 416, 664, 801
TspGWI ACGGA 1 cut(s) 451
TspRI CASTG 6 cut(s) 197, 546, 555, 706, 743, 930
Van91I CCANNNNNTGG 1 cut(s) 15
VneI GTGCAC 1 cut(s) 1110
VpaK11BI GGWCC 2 cut(s) 172, 303
XceI RCATGY 1 cut(s) 1144
XmiI GTMKAC 1 cut(s) 216
XmnI GAANNNNTTC 1 cut(s) 792
XspI CTAG 2 cut(s) 417, 584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.