BEACH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G45540 AT2G45540 AT2G45540 AT2G45540 AT2G45540 AT2G45540 |
| fragaria_vesca | FvH4_7g12350 FvH4_7g12350 FvH4_7g12350 FvH4_7g12350 |
| malus_domestica | MD02G1199600.v1.1 |
| prunus_persica | Prupe.2G149000_v2.0.a1 Prupe.2G149000_v2.0.a1 Prupe.2G149000_v2.0.a1 |
| pyrus_communis | pycom02g16360 |
| rosa_chinensis | RchiOBHm_Chr1g0351141 |
| rosa_laevigata | RLG00000028428 |
| rosa_multiflora | Rmu_sc0001619.1_g000013 |
| rosa_roxburghii | Rroxscaffold_4G00304030 |
| rosa_rugosa | Rorug01G0216800 Rorug01G0216900 |
| rosa_samantha | Rh1AG231200 Rh1CG215100 |
| rosa_wichuraiana | Rw1G020100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 5792, 6792 |
| AarI | CACCTGC | 1 cut(s) | 5278 |
| AatII | GACGTC | 2 cut(s) | 2686, 8667 |
| Acc16I | TGCGCA | 1 cut(s) | 7335 |
| Acc36I | ACCTGC | 5 cut(s) | 211, 476, 538, 2056, 5278 |
| Acc65I | GGTACC | 1 cut(s) | 3416 |
| AccB1I | GGYRCC | 3 cut(s) | 3416, 5303, 6286 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 4783 |
| AccBSI | CCGCTC | 2 cut(s) | 1992, 5593 |
| AccI | GTMKAC | 3 cut(s) | 1744, 5673, 5702 |
| AccII | CGCG | 2 cut(s) | 6372, 7380 |
| AccIII | TCCGGA | 2 cut(s) | 550, 7587 |
| AcoI | YGGCCR | 4 cut(s) | 1229, 5117, 5553, 7750 |
| AcuI | CTGAAG | 4 cut(s) | 2754, 4025, 5637, 8633 |
| AcyI | GRCGYC | 6 cut(s) | 1747, 2683, 3527, 6287, 8230, 8664 |
| AdeI | CACNNNGTG | 2 cut(s) | 1049, 2360 |
| AfeI | AGCGCT | 2 cut(s) | 3660, 8760 |
| AflII | CTTAAG | 1 cut(s) | 6698 |
| AflIII | ACRYGT | 3 cut(s) | 7925, 8251, 8577 |
| AgeI | ACCGGT | 1 cut(s) | 8173 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2682 |
| AjiI | CACGTC | 2 cut(s) | 3965, 8580 |
| Alw21I | GWGCWC | 9 cut(s) | 2887, 3325, 3400, 4035, 6550, 7635, 8029, 8300, 8503 |
| Alw44I | GTGCAC | 1 cut(s) | 3396 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 1370, 4067, 4448 |
| Ama87I | CYCGRG | 5 cut(s) | 768, 3026, 5369, 6686, 8082 |
| Aor13HI | TCCGGA | 2 cut(s) | 550, 7587 |
| Aor51HI | AGCGCT | 2 cut(s) | 3660, 8760 |
| ApaLI | GTGCAC | 1 cut(s) | 3396 |
| AseI | ATTAAT | 1 cut(s) | 120 |
| AsiGI | ACCGGT | 1 cut(s) | 8173 |
| Asp700I | GAANNNNTTC | 8 cut(s) | 3060, 3184, 3467, 3741, 6581, 6930, 7099, 7161 |
| Asp718I | GGTACC | 1 cut(s) | 3416 |
| AspLEI | GCGC | 9 cut(s) | 3481, 3661, 3867, 5832, 6289, 7336, 7380, 7876, 8761 |
| AsuC2I | CCSGG | 1 cut(s) | 7184 |
| AsuII | TTCGAA | 2 cut(s) | 6575, 6750 |
| AsuNHI | GCTAGC | 2 cut(s) | 1888, 7876 |
| AvaI | CYCGRG | 5 cut(s) | 768, 3026, 5369, 6686, 8082 |
| AvaII | GGWCC | 8 cut(s) | 1211, 2126, 2479, 3023, 3820, 7486, 7832, 8243 |
| BaeGI | GKGCMC | 2 cut(s) | 1387, 3400 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 8160, 8193 |
| BalI | TGGCCA | 3 cut(s) | 1231, 5555, 7752 |
| BamHI | GGATCC | 4 cut(s) | 4460, 6825, 6958, 8078 |
| BanI | GGYRCC | 3 cut(s) | 3416, 5303, 6286 |
| BanII | GRGCYC | 7 cut(s) | 410, 3315, 4035, 8049, 8300, 8503, 8894 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1501, 1533, 8232, 8264 |
| BauI | CACGAG | 2 cut(s) | 3357, 5493 |
| BbsI | GAAGAC | 5 cut(s) | 390, 1520, 2343, 4863, 6492 |
| Bbv12I | GWGCWC | 9 cut(s) | 2887, 3325, 3400, 4035, 6550, 7635, 8029, 8300, 8503 |
| BbvCI | CCTCAGC | 2 cut(s) | 2052, 8652 |
| BceAI | ACGGC | 5 cut(s) | 1209, 1419, 6074, 6659, 8611 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2232, 2266 |
| BciVI | GTATCC | 2 cut(s) | 4492, 6819 |
| BclI | TGATCA | 3 cut(s) | 391, 5983, 8373 |
| BcnI | CCSGG | 1 cut(s) | 7184 |
| BfoI | RGCGCY | 5 cut(s) | 3482, 3662, 6290, 7877, 8762 |
| BfrI | CTTAAG | 1 cut(s) | 6698 |
| BfuAI | ACCTGC | 5 cut(s) | 211, 476, 538, 2056, 5278 |
| BfuI | GTATCC | 2 cut(s) | 4492, 6819 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3487 |
| BglII | AGATCT | 3 cut(s) | 6883, 7452, 8302 |
| BlpI | GCTNAGC | 5 cut(s) | 1988, 4131, 4449, 4921, 7906 |
| BmcAI | AGTACT | 2 cut(s) | 1028, 6601 |
| Bme18I | GGWCC | 8 cut(s) | 1211, 2126, 2479, 3023, 3820, 7486, 7832, 8243 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2682 |
| BmeT110I | CYCGRG | 5 cut(s) | 768, 3026, 5369, 6686, 8082 |
| BmgBI | CACGTC | 2 cut(s) | 3965, 8580 |
| BmrI | ACTGGG | 4 cut(s) | 404, 1974, 2801, 7457 |
| BmtI | GCTAGC | 2 cut(s) | 1892, 7880 |
| BmuI | ACTGGG | 4 cut(s) | 404, 1974, 2801, 7457 |
| BpiI | GAAGAC | 5 cut(s) | 390, 1520, 2343, 4863, 6492 |
| Bpu10I | CCTNAGC | 5 cut(s) | 2052, 3805, 4107, 7629, 8652 |
| Bpu1102I | GCTNAGC | 5 cut(s) | 1988, 4131, 4449, 4921, 7906 |
| Bpu14I | TTCGAA | 2 cut(s) | 6575, 6750 |
| BpuEI | CTTGAG | 7 cut(s) | 3767, 3922, 4032, 5093, 5763, 6350, 8846 |
| BpuMI | CCSGG | 1 cut(s) | 7184 |
| Bsa29I | ATCGAT | 2 cut(s) | 6344, 7212 |
| BsaBI | GATNNNNATC | 2 cut(s) | 207, 741 |
| BsaHI | GRCGYC | 6 cut(s) | 1747, 2683, 3527, 6287, 8230, 8664 |
| BsaI | GGTCTC | 4 cut(s) | 2669, 3942, 5540, 6676 |
| BsaWI | WCCGGW | 3 cut(s) | 550, 7587, 8173 |
| Bse118I | RCCGGY | 4 cut(s) | 1749, 5440, 6895, 8173 |
| Bse8I | GATNNNNATC | 2 cut(s) | 207, 741 |
| BseAI | TCCGGA | 2 cut(s) | 550, 7587 |
| BseCI | ATCGAT | 2 cut(s) | 6344, 7212 |
| BseJI | GATNNNNATC | 2 cut(s) | 207, 741 |
| BseRI | GAGGAG | 6 cut(s) | 29, 1707, 1857, 5122, 5350, 6639 |
| BseSI | GKGCMC | 2 cut(s) | 1387, 3400 |
| BseYI | CCCAGC | 4 cut(s) | 1165, 6779, 7518, 8598 |
| BsgI | GTGCAG | 6 cut(s) | 2046, 2474, 4599, 5547, 5886, 6456 |
| Bsh1236I | CGCG | 2 cut(s) | 6372, 7380 |
| Bsh1285I | CGRYCG | 1 cut(s) | 6900 |
| BshNI | GGYRCC | 3 cut(s) | 3416, 5303, 6286 |
| BshTI | ACCGGT | 1 cut(s) | 8173 |
| BshVI | ATCGAT | 2 cut(s) | 6344, 7212 |
| BsiEI | CGRYCG | 1 cut(s) | 6900 |
| BsiHKAI | GWGCWC | 9 cut(s) | 2887, 3325, 3400, 4035, 6550, 7635, 8029, 8300, 8503 |
| BsiHKCI | CYCGRG | 5 cut(s) | 768, 3026, 5369, 6686, 8082 |
| BsiSI | CCGG | 8 cut(s) | 551, 1750, 5441, 6896, 7184, 7588, 8174, 8828 |
| BsmBI | CGTCTC | 1 cut(s) | 4267 |
| Bso31I | GGTCTC | 4 cut(s) | 2669, 3942, 5540, 6676 |
| BsoBI | CYCGRG | 5 cut(s) | 768, 3026, 5369, 6686, 8082 |
| Bsp119I | TTCGAA | 2 cut(s) | 6575, 6750 |
| Bsp13I | TCCGGA | 2 cut(s) | 550, 7587 |
| Bsp1407I | TGTACA | 2 cut(s) | 82, 887 |
| Bsp1720I | GCTNAGC | 5 cut(s) | 1988, 4131, 4449, 4921, 7906 |
| Bsp19I | CCATGG | 1 cut(s) | 1883 |
| BspDI | ATCGAT | 2 cut(s) | 6344, 7212 |
| BspEI | TCCGGA | 2 cut(s) | 550, 7587 |
| BspFNI | CGCG | 2 cut(s) | 6372, 7380 |
| BspHI | TCATGA | 2 cut(s) | 64, 6934 |
| BspMAI | CTGCAG | 8 cut(s) | 1315, 3196, 4063, 4414, 4441, 5491, 6216, 7651 |
| BspMI | ACCTGC | 5 cut(s) | 211, 476, 538, 2056, 5278 |
| BspOI | GCTAGC | 2 cut(s) | 1892, 7880 |
| BspQI | GCTCTTC | 1 cut(s) | 4830 |
| BspT104I | TTCGAA | 2 cut(s) | 6575, 6750 |
| BspT107I | GGYRCC | 3 cut(s) | 3416, 5303, 6286 |
| BspTI | CTTAAG | 1 cut(s) | 6698 |
| BspTNI | GGTCTC | 4 cut(s) | 2669, 3942, 5540, 6676 |
| BsrBI | CCGCTC | 2 cut(s) | 1992, 5593 |
| BsrFI | RCCGGY | 4 cut(s) | 1749, 5440, 6895, 8173 |
| BsrGI | TGTACA | 2 cut(s) | 82, 887 |
| BssAI | RCCGGY | 4 cut(s) | 1749, 5440, 6895, 8173 |
| BssNAI | GTATAC | 1 cut(s) | 5703 |
| BssNI | GRCGYC | 6 cut(s) | 1747, 2683, 3527, 6287, 8230, 8664 |
| BssSI | CACGAG | 2 cut(s) | 3357, 5493 |
| Bst1107I | GTATAC | 1 cut(s) | 5703 |
| Bst2BI | CACGAG | 2 cut(s) | 3357, 5493 |
| Bst6I | CTCTTC | 9 cut(s) | 6, 2277, 2937, 3390, 3547, 4830, 5594, 7538, 8356 |
| BstACI | GRCGYC | 6 cut(s) | 1747, 2683, 3527, 6287, 8230, 8664 |
| BstAFI | CTTAAG | 1 cut(s) | 6698 |
| BstAUI | TGTACA | 2 cut(s) | 82, 887 |
| BstBI | TTCGAA | 2 cut(s) | 6575, 6750 |
| BstDSI | CCRYGG | 2 cut(s) | 1883, 6090 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3132 |
| BstFNI | CGCG | 2 cut(s) | 6372, 7380 |
| BstH2I | RGCGCY | 5 cut(s) | 3482, 3662, 6290, 7877, 8762 |
| BstHHI | GCGC | 9 cut(s) | 3481, 3661, 3867, 5832, 6289, 7336, 7380, 7876, 8761 |
| BstMCI | CGRYCG | 1 cut(s) | 6900 |
| BstSLI | GKGCMC | 2 cut(s) | 1387, 3400 |
| BstUI | CGCG | 2 cut(s) | 6372, 7380 |
| BstV2I | GAAGAC | 5 cut(s) | 390, 1520, 2343, 4863, 6492 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3875, 8785 |
| BstZ17I | GTATAC | 1 cut(s) | 5703 |
| Bsu15I | ATCGAT | 2 cut(s) | 6344, 7212 |
| BsuI | GTATCC | 2 cut(s) | 4492, 6819 |
| BsuTUI | ATCGAT | 2 cut(s) | 6344, 7212 |
| BtgI | CCRYGG | 2 cut(s) | 1883, 6090 |
| BtgZI | GCGATG | 4 cut(s) | 4116, 5303, 6249, 8895 |
| BtrI | CACGTC | 2 cut(s) | 3965, 8580 |
| BtsI | GCAGTG | 5 cut(s) | 1556, 4597, 6288, 6444, 7633 |
| BveI | ACCTGC | 5 cut(s) | 211, 476, 538, 2056, 5278 |
| CaiI | CAGNNNCTG | 3 cut(s) | 1370, 4067, 4448 |
| CciI | TCATGA | 2 cut(s) | 64, 6934 |
| CfoI | GCGC | 9 cut(s) | 3481, 3661, 3867, 5832, 6289, 7336, 7380, 7876, 8761 |
| Cfr10I | RCCGGY | 4 cut(s) | 1749, 5440, 6895, 8173 |
| ClaI | ATCGAT | 2 cut(s) | 6344, 7212 |
| CseI | GACGC | 6 cut(s) | 1755, 3516, 4368, 5781, 8219, 8458 |
| CsiI | ACCWGGT | 1 cut(s) | 675 |
| CspAI | ACCGGT | 1 cut(s) | 8173 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 6072, 6107 |
| DinI | GGCGCC | 1 cut(s) | 6288 |
| DraI | TTTAAA | 1 cut(s) | 3988 |
| DraIII | CACNNNGTG | 2 cut(s) | 1049, 2360 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2682 |
| EaeI | YGGCCR | 4 cut(s) | 1229, 5117, 5553, 7750 |
| Eam1104I | CTCTTC | 9 cut(s) | 6, 2277, 2937, 3390, 3547, 4830, 5594, 7538, 8356 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2682 |
| EarI | CTCTTC | 9 cut(s) | 6, 2277, 2937, 3390, 3547, 4830, 5594, 7538, 8356 |
| EciI | GGCGGA | 1 cut(s) | 7086 |
| Ecl136II | GAGCTC | 3 cut(s) | 4033, 8298, 8501 |
| Eco24I | GRGCYC | 7 cut(s) | 410, 3315, 4035, 8049, 8300, 8503, 8894 |
| Eco31I | GGTCTC | 4 cut(s) | 2669, 3942, 5540, 6676 |
| Eco32I | GATATC | 2 cut(s) | 6530, 8746 |
| Eco47I | GGWCC | 8 cut(s) | 1211, 2126, 2479, 3023, 3820, 7486, 7832, 8243 |
| Eco47III | AGCGCT | 2 cut(s) | 3660, 8760 |
| Eco53kI | GAGCTC | 3 cut(s) | 4033, 8298, 8501 |
| Eco57I | CTGAAG | 4 cut(s) | 2754, 4025, 5637, 8633 |
| Eco88I | CYCGRG | 5 cut(s) | 768, 3026, 5369, 6686, 8082 |
| EcoICRI | GAGCTC | 3 cut(s) | 4033, 8298, 8501 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3132 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1778, 2126, 3023, 3820, 8243 |
| EcoRI | GAATTC | 2 cut(s) | 361, 8638 |
| EcoRV | GATATC | 2 cut(s) | 6530, 8746 |
| EcoT22I | ATGCAT | 5 cut(s) | 1540, 1961, 3637, 4811, 6622 |
| EcoT38I | GRGCYC | 7 cut(s) | 410, 3315, 4035, 8049, 8300, 8503, 8894 |
| EgeI | GGCGCC | 1 cut(s) | 6288 |
| EheI | GGCGCC | 1 cut(s) | 6288 |
| Esp3I | CGTCTC | 1 cut(s) | 4267 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 3169, 3201, 5719, 5751, 5772, 5804 |
| FauI | CCCGC | 4 cut(s) | 1384, 1985, 5586, 8265 |
| FauNDI | CATATG | 3 cut(s) | 3594, 3631, 7612 |
| FbaI | TGATCA | 3 cut(s) | 391, 5983, 8373 |
| FblI | GTMKAC | 3 cut(s) | 1744, 5673, 5702 |
| FriOI | GRGCYC | 7 cut(s) | 410, 3315, 4035, 8049, 8300, 8503, 8894 |
| FspI | TGCGCA | 1 cut(s) | 7335 |
| GlaI | GCGC | 9 cut(s) | 3480, 3660, 3866, 5831, 6288, 7335, 7379, 7875, 8760 |
| GsaI | CCCAGC | 4 cut(s) | 1169, 6783, 7522, 8602 |
| HaeII | RGCGCY | 5 cut(s) | 3482, 3662, 6290, 7877, 8762 |
| HapII | CCGG | 8 cut(s) | 551, 1750, 5441, 6896, 7184, 7588, 8174, 8828 |
| HgaI | GACGC | 6 cut(s) | 1755, 3516, 4368, 5781, 8219, 8458 |
| HhaI | GCGC | 9 cut(s) | 3481, 3661, 3867, 5832, 6289, 7336, 7380, 7876, 8761 |
| Hin1I | GRCGYC | 6 cut(s) | 1747, 2683, 3527, 6287, 8230, 8664 |
| Hin6I | GCGC | 9 cut(s) | 3479, 3659, 3865, 5830, 6287, 7334, 7378, 7874, 8759 |
| HinP1I | GCGC | 9 cut(s) | 3479, 3659, 3865, 5830, 6287, 7334, 7378, 7874, 8759 |
| HincII | GTYRAC | 7 cut(s) | 1745, 2806, 5767, 6219, 6568, 7194, 8793 |
| HindII | GTYRAC | 7 cut(s) | 1745, 2806, 5767, 6219, 6568, 7194, 8793 |
| HindIII | AAGCTT | 2 cut(s) | 2522, 5387 |
| HpaI | GTTAAC | 1 cut(s) | 7194 |
| HpaII | CCGG | 8 cut(s) | 551, 1750, 5441, 6896, 7184, 7588, 8174, 8828 |
| Hpy99I | CGWCG | 7 cut(s) | 1746, 1749, 2046, 3370, 3532, 4384, 8235 |
| Hsp92I | GRCGYC | 6 cut(s) | 1747, 2683, 3527, 6287, 8230, 8664 |
| HspAI | GCGC | 9 cut(s) | 3479, 3659, 3865, 5830, 6287, 7334, 7378, 7874, 8759 |
| KasI | GGCGCC | 1 cut(s) | 6286 |
| KflI | GGGWCCC | 1 cut(s) | 3023 |
| Kpn2I | TCCGGA | 2 cut(s) | 550, 7587 |
| KpnI | GGTACC | 1 cut(s) | 3420 |
| KroI | GCCGGC | 1 cut(s) | 1749 |
| KroNI | GCCGGC | 1 cut(s) | 1751 |
| Ksp22I | TGATCA | 3 cut(s) | 391, 5983, 8373 |
| KspAI | GTTAAC | 1 cut(s) | 7194 |
| LguI | GCTCTTC | 1 cut(s) | 4830 |
| MabI | ACCWGGT | 1 cut(s) | 675 |
| MbiI | CCGCTC | 2 cut(s) | 1992, 5593 |
| MfeI | CAATTG | 4 cut(s) | 1317, 4161, 7281, 8490 |
| MlsI | TGGCCA | 3 cut(s) | 1231, 5555, 7752 |
| MluNI | TGGCCA | 3 cut(s) | 1231, 5555, 7752 |
| Mly113I | GGCGCC | 1 cut(s) | 6287 |
| MlyI | GAGTC | 8 cut(s) | 269, 1163, 2567, 2923, 4039, 5351, 7137, 8727 |
| MmeI | TCCRAC | 5 cut(s) | 2287, 3348, 3993, 5776, 6470 |
| Mox20I | TGGCCA | 3 cut(s) | 1231, 5555, 7752 |
| Mph1103I | ATGCAT | 5 cut(s) | 1540, 1961, 3637, 4811, 6622 |
| MroI | TCCGGA | 2 cut(s) | 550, 7587 |
| MroNI | GCCGGC | 1 cut(s) | 1749 |
| MroXI | GAANNNNTTC | 8 cut(s) | 3060, 3184, 3467, 3741, 6581, 6930, 7099, 7161 |
| MscI | TGGCCA | 3 cut(s) | 1231, 5555, 7752 |
| MslI | CAYNNNNRTG | 6 cut(s) | 2591, 4804, 4930, 5991, 6461, 7341 |
| Msp20I | TGGCCA | 3 cut(s) | 1231, 5555, 7752 |
| MspCI | CTTAAG | 1 cut(s) | 6698 |
| MspI | CCGG | 8 cut(s) | 551, 1750, 5441, 6896, 7184, 7588, 8174, 8828 |
| MunI | CAATTG | 4 cut(s) | 1317, 4161, 7281, 8490 |
| MvnI | CGCG | 2 cut(s) | 6372, 7380 |
| NaeI | GCCGGC | 1 cut(s) | 1751 |
| NarI | GGCGCC | 1 cut(s) | 6287 |
| NciI | CCSGG | 1 cut(s) | 7184 |
| NcoI | CCATGG | 1 cut(s) | 1883 |
| NdeI | CATATG | 3 cut(s) | 3594, 3631, 7612 |
| NgoMIV | GCCGGC | 1 cut(s) | 1749 |
| NheI | GCTAGC | 2 cut(s) | 1888, 7876 |
| NmeAIII | GCCGAG | 2 cut(s) | 3680, 6226 |
| NsbI | TGCGCA | 1 cut(s) | 7335 |
| NsiI | ATGCAT | 5 cut(s) | 1540, 1961, 3637, 4811, 6622 |
| NspV | TTCGAA | 2 cut(s) | 6575, 6750 |
| PaeI | GCATGC | 2 cut(s) | 2038, 4813 |
| PaeR7I | CTCGAG | 1 cut(s) | 5369 |
| PagI | TCATGA | 2 cut(s) | 64, 6934 |
| PaqCI | CACCTGC | 1 cut(s) | 5278 |
| PciI | ACATGT | 1 cut(s) | 8251 |
| PciSI | GCTCTTC | 1 cut(s) | 4830 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1349, 3961 |
| PdiI | GCCGGC | 1 cut(s) | 1751 |
| PdmI | GAANNNNTTC | 8 cut(s) | 3060, 3184, 3467, 3741, 6581, 6930, 7099, 7161 |
| PflFI | GACNNNGTC | 1 cut(s) | 6496 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 4783 |
| PfoI | TCCNGGA | 3 cut(s) | 401, 7182, 8688 |
| PinAI | ACCGGT | 1 cut(s) | 8173 |
| PleI | GAGTC | 8 cut(s) | 269, 1162, 2566, 2923, 4039, 5351, 7136, 8727 |
| PluTI | GGCGCC | 1 cut(s) | 6290 |
| PpsI | GAGTC | 8 cut(s) | 269, 1162, 2566, 2923, 4039, 5351, 7136, 8727 |
| PpuMI | RGGWCCY | 4 cut(s) | 2126, 3023, 3820, 8243 |
| PscI | ACATGT | 1 cut(s) | 8251 |
| PshBI | ATTAAT | 1 cut(s) | 120 |
| PsiI | TTATAA | 2 cut(s) | 5792, 6792 |
| Psp124BI | GAGCTC | 3 cut(s) | 4035, 8300, 8503 |
| Psp5II | RGGWCCY | 4 cut(s) | 2126, 3023, 3820, 8243 |
| PspFI | CCCAGC | 4 cut(s) | 1165, 6779, 7518, 8598 |
| PspPPI | RGGWCCY | 4 cut(s) | 2126, 3023, 3820, 8243 |
| PstI | CTGCAG | 8 cut(s) | 1315, 3196, 4063, 4414, 4441, 5491, 6216, 7651 |
| PstNI | CAGNNNCTG | 3 cut(s) | 1370, 4067, 4448 |
| PsyI | GACNNNGTC | 1 cut(s) | 6496 |
| PvuII | CAGCTG | 5 cut(s) | 1367, 2051, 4448, 7522, 7838 |
| RseI | CAYNNNNRTG | 6 cut(s) | 2591, 4804, 4930, 5991, 6461, 7341 |
| SacI | GAGCTC | 3 cut(s) | 4035, 8300, 8503 |
| SalI | GTCGAC | 1 cut(s) | 1743 |
| SapI | GCTCTTC | 1 cut(s) | 4830 |
| ScaI | AGTACT | 2 cut(s) | 1028, 6601 |
| SchI | GAGTC | 8 cut(s) | 269, 1163, 2567, 2923, 4039, 5351, 7137, 8727 |
| SexAI | ACCWGGT | 1 cut(s) | 675 |
| SfoI | GGCGCC | 1 cut(s) | 6288 |
| Sfr274I | CTCGAG | 1 cut(s) | 5369 |
| SfuI | TTCGAA | 2 cut(s) | 6575, 6750 |
| SgrDI | CGTCGACG | 1 cut(s) | 1743 |
| SinI | GGWCC | 8 cut(s) | 1211, 2126, 2479, 3023, 3820, 7486, 7832, 8243 |
| SlaI | CTCGAG | 1 cut(s) | 5369 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 2591, 4804, 4930, 5991, 6461, 7341 |
| SmlI | CTYRAG | 9 cut(s) | 3746, 3937, 4047, 5072, 5369, 5778, 6329, 6698, 8861 |
| SmoI | CTYRAG | 9 cut(s) | 3746, 3937, 4047, 5072, 5369, 5778, 6329, 6698, 8861 |
| SphI | GCATGC | 2 cut(s) | 2038, 4813 |
| SspDI | GGCGCC | 1 cut(s) | 6286 |
| SspI | AATATT | 2 cut(s) | 619, 2238 |
| SstI | GAGCTC | 3 cut(s) | 4035, 8300, 8503 |
| TatI | WGTACW | 9 cut(s) | 82, 887, 1026, 1172, 2465, 4295, 5716, 6599, 7465 |
| TauI | GCSGC | 5 cut(s) | 1549, 2102, 5119, 7383, 7655 |
| TspGWI | ACGGA | 6 cut(s) | 865, 4453, 5048, 5691, 7808, 8783 |
| Tth111I | GACNNNGTC | 1 cut(s) | 6496 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 4783 |
| Vha464I | CTTAAG | 1 cut(s) | 6698 |
| VneI | GTGCAC | 1 cut(s) | 3396 |
| VpaK11BI | GGWCC | 8 cut(s) | 1211, 2126, 2479, 3023, 3820, 7486, 7832, 8243 |
| VspI | ATTAAT | 1 cut(s) | 120 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3132 |
| XbaI | TCTAGA | 1 cut(s) | 7312 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 910, 2686, 6436 |
| XhoI | CTCGAG | 1 cut(s) | 5369 |
| XmiI | GTMKAC | 3 cut(s) | 1744, 5673, 5702 |
| XmnI | GAANNNNTTC | 8 cut(s) | 3060, 3184, 3467, 3741, 6581, 6930, 7099, 7161 |
| ZraI | GACGTC | 2 cut(s) | 2684, 8665 |
| ZrmI | AGTACT | 2 cut(s) | 1028, 6601 |
| Zsp2I | ATGCAT | 5 cut(s) | 1540, 1961, 3637, 4811, 6622 |