Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0005260

Physical Location & Seq

Genomic Coordinates Forward (+)

251716 .. 254645

Gene Structure 2930 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g00280.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGAAACGTATTCACTTTGTCCAAGAGTTTGTTGAGTTGGAGGACCCTGTTGAGAATATTGGAGCTAAGTTAGTGAGACAGGCAGCTGCCAAGACTAATGACCTAGCTGGTGACGGTACAACCACTTCTGTTGTTCTTGCACAAGGTCTTATTGCTGAAGGTGTCAAGGTGGTTGCAGCTGGGGCAAACCCTGTTTTAATCACACGTGGCATTGAAAAGACCACCAGAGCTCTAGTAAATGAGCTTAAGGAAAACGATCGATCTCCAAAGAGCCTAGTTGAAGACAGTGAGCTGGCAGATGTTGCAGCTGTTAGTGCAGGAAACAATTATGAAGTAGGAAACATGATCGCTGAAGCTTTGAGCAAGGTGGGTAGGAAGGGTGTGGTGACCCTTGAAGAGGGAAAGAGCGCTGAGAACAGCCTGTATGTTGTTGAGGGAATGCAATTTGATCGTGGTTATATCTCACCTTACTTTGTCACTGACAGTGAGAAAATGGCTGTTGAATATGAGAACTGCAAGTTGCTTCTTGTTGATAAAAAAATTACAAATGCAAGGGACCTTATTAACATTTTGGAGGATGCTATTAGAGGAGGATACCCAGTTGTAATTGTTGCAGAAGACATTGAACAAGAAGCTCTTGCAACTCTTGTTCTCCTGGGTTTGGTCGATCGCAAGAGCCAGTACCTTGATGACATTGCTATTCTAACTGGAGGAACTGTCATCAGAGAGGAAGTAGGACTCACATTAGAGAATGTTGGAAAGGAGGTCCTAGGCCATGCTTCGAAAGTGGTTCTTACAAAGGACACCTCCACAATTGTTGGTGATGGAAGTACTCAGGAAGCAGTTAACAAGCGAGTTGCCCAAATTAAGAACCTCATTGAGGCGGCCGAGCAGGACTATGAAAGAGAAAAGCTTAATGAAAGGATTGCAAAACTATCTGGTGGTGTTGCTGTTATACAGGTTGGAGCACAAACAGAGACAGAGCTGAAAGAAAAGAAACTGAGAGTTGAAGATGCTCTGAATGCAACAAAGGCAGCTGTTGAGGAAGGTATTGTTGTCGGAGGTGGATGCACACTTCTGAGGTTAGCATCAAAGGTTGACGCAATCAAAGATACTCTTGATAATGATGAAGAAAAGGTTGGAGCAGATATCGTTAAAAGAGCTCTTAGTTACCCTCTGAAATTAATCGCCAAGAATGCTGGTGTAAATGGAAGTGTTGTCAGTGAGAAGGTGCTTTCAAGTGACAATCCGAAGTATGGATACAATGCTGCCACTGGAAACTATGAAGATTTAATGGCTGCTGGAATCATTGATCCAACCAAGGTGGTGAGATGTTGCCTAGAGCATGCATCCTCTGTTGCGAAAACTTTCTTAATGTCAGATTGTGTAGTTGTTGAGATTAAAGAGCCAGAGCCTGCAGTGCCTGCCGGCAACCCCATGGACAACTCAGGCTACGGTTACGTTGAATTCCTGTTCAGTGTAGCAATCACTGCAAGTATAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005829 GO:0005840 GO:0006457 GO:0006458 GO:0006996 GO:0007005 GO:0008150 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0022626 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044183 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0051082 GO:0061077 GO:0070013 GO:0071840 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko04940 ko05134 ko05152 map03018 map04212 map04940 map05134 map05152

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

502

Amino Acids

53.6

Weight (kDa)

4.8

Isoelectric Point (pI)

25.5

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55490 AT1G55490 AT1G55490 AT1G55490 AT1G55490 AT3G13470 AT5G56500 AT5G56500
fragaria_vesca	FvH4_3g45800 FvH4_3g45800 FvH4_3g45800 FvH4_3g45800
malus_domestica	MD03G1002900.v1.1 MD11G1002700.v1.1
prunus_persica	Prupe.6G002500_v2.0.a1 Prupe.6G002500_v2.0.a1
pyrus_communis	pycom03g00280 pycom11g00250
rosa_chinensis	RchiOBHm_Chr5g0083881
rosa_laevigata	RLG00000037061
rosa_multiflora	Rmu_sc0001287.1_g000043
rosa_roxburghii	Rroxscaffold_1G00000710
rosa_rugosa	Rorug05G0487100 Rorug05G0487200
rosa_samantha	Rh5AG540000 Rh5BG565200 Rh5CG587000 Rh5DG573600
rosa_wichuraiana	Rw5G050210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	884
AclWI	GGATC	1 cut(s)	1307
AcoI	YGGCCR	1 cut(s)	885
AcsI	RAATTY	1 cut(s)	1466
AcuI	CTGAAG	2 cut(s)	177, 372
AcvI	CACGTG	1 cut(s)	206
AfaI	GTAC	3 cut(s)	118, 683, 832
AfeI	AGCGCT	1 cut(s)	409
AfiI	CCNNNNNNNGG	4 cut(s)	397, 661, 880, 1256
AflII	CTTAAG	1 cut(s)	245
AflIII	ACRYGT	1 cut(s)	203
AgsI	TTSAA	8 cut(s)	215, 281, 395, 503, 626, 1010, 1239, 1466
AjnI	CCWGG	1 cut(s)	654
AjuI	GAANNNNNNNTTGG	2 cut(s)	1122, 1154
Alw21I	GWGCWC	3 cut(s)	232, 970, 1165
Alw26I	GTCTC	2 cut(s)	70, 971
AlwI	GGATC	1 cut(s)	1307
AlwNI	CAGNNNCTG	2 cut(s)	1415, 1424
Aor51HI	AGCGCT	1 cut(s)	409
AoxI	GGCC	2 cut(s)	772, 885
ApeKI	GCWGC	7 cut(s)	83, 86, 176, 305, 1034, 1268, 1298
ApoI	RAATTY	1 cut(s)	1466
AseI	ATTAAT	1 cut(s)	1184
Asp700I	GAANNNNTTC	1 cut(s)	1367
AspA2I	CCTAGG	1 cut(s)	769
AspLEI	GCGC	1 cut(s)	410
AspS9I	GGNCC	3 cut(s)	43, 556, 766
AsuHPI	GGTGA	5 cut(s)	122, 397, 456, 833, 1339
AsuII	TTCGAA	1 cut(s)	782
AvaII	GGWCC	3 cut(s)	43, 556, 766
AvrII	CCTAGG	1 cut(s)	769
BanII	GRGCYC	2 cut(s)	232, 1165
BarI	GAAGNNNNNNTAC	4 cut(s)	109, 141, 1244, 1276
BbrPI	CACGTG	1 cut(s)	206
BbsI	GAAGAC	2 cut(s)	288, 624
Bbv12I	GWGCWC	3 cut(s)	232, 970, 1165
BbvI	GCAGC	7 cut(s)	73, 95, 188, 317, 1046, 1255, 1285
BccI	CCATC	1 cut(s)	818
BcgI	CGANNNNNNTGC	2 cut(s)	431, 465
BciT130I	CCWGG	1 cut(s)	656
BciVI	GTATCC	2 cut(s)	587, 1253
BcoDI	GTCTC	2 cut(s)	70, 971
BfaI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
BfmI	CTRYAG	1 cut(s)	1416
BfoI	RGCGCY	1 cut(s)	411
BfrI	CTTAAG	1 cut(s)	245
BfuI	GTATCC	2 cut(s)	587, 1253
BisI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
BlnI	CCTAGG	1 cut(s)	769
BlsI	GCNGC	8 cut(s)	85, 88, 178, 307, 886, 1036, 1270, 1300
BmcAI	AGTACT	1 cut(s)	832
Bme1390I	CCNGG	1 cut(s)	656
Bme18I	GGWCC	3 cut(s)	43, 556, 766
BmgT120I	GGNCC	3 cut(s)	43, 556, 766
BmiI	GGNNCC	2 cut(s)	45, 557
BmrFI	CCNGG	1 cut(s)	656
BmrI	ACTGGG	1 cut(s)	593
BmsI	GCATC	5 cut(s)	568, 1003, 1058, 1097, 1358
BmuI	ACTGGG	1 cut(s)	593
BpiI	GAAGAC	2 cut(s)	288, 624
BpmI	CTGGAG	1 cut(s)	729
Bpu14I	TTCGAA	1 cut(s)	782
Bsa29I	ATCGAT	1 cut(s)	259
BsaAI	YACGTR	1 cut(s)	206
BsaJI	CCNNGG	4 cut(s)	655, 769, 1320, 1437
BsaXI	ACNNNNNCTCC	2 cut(s)	702, 732
Bsc4I	CCNNNNNNNGG	4 cut(s)	397, 661, 880, 1256
Bse118I	RCCGGY	1 cut(s)	1427
Bse1I	ACTGG	4 cut(s)	599, 679, 712, 1279
Bse3DI	GCAATG	1 cut(s)	693
BseBI	CCWGG	1 cut(s)	656
BseCI	ATCGAT	1 cut(s)	259
BseDI	CCNNGG	4 cut(s)	655, 769, 1320, 1437
BseGI	GGATG	3 cut(s)	583, 1073, 1349
BseLI	CCNNNNNNNGG	4 cut(s)	397, 661, 880, 1256
BseMI	GCAATG	1 cut(s)	693
BseMII	CTCAG	5 cut(s)	402, 848, 992, 1070, 1461
BseNI	ACTGG	4 cut(s)	599, 679, 712, 1279
BseRI	GAGGAG	1 cut(s)	603
BseX3I	CGGCCG	1 cut(s)	885
BseXI	GCAGC	7 cut(s)	73, 95, 188, 317, 1046, 1255, 1285
BseYI	CCCAGC	1 cut(s)	179
BsgI	GTGCAG	1 cut(s)	336
Bsh1285I	CGRYCG	3 cut(s)	259, 670, 888
BshFI	GGCC	2 cut(s)	774, 887
BshVI	ATCGAT	1 cut(s)	259
BsiEI	CGRYCG	3 cut(s)	259, 670, 888
BsiHKAI	GWGCWC	3 cut(s)	232, 970, 1165
BsiSI	CCGG	1 cut(s)	1428
BslFI	GGGAC	1 cut(s)	569
BslI	CCNNNNNNNGG	4 cut(s)	397, 661, 880, 1256
BsmAI	GTCTC	2 cut(s)	70, 971
BsmFI	GGGAC	1 cut(s)	569
BsmI	GAATGC	3 cut(s)	444, 1027, 1201
BsnI	GGCC	2 cut(s)	774, 887
Bsp119I	TTCGAA	1 cut(s)	782
Bsp1286I	GDGCHC	3 cut(s)	232, 970, 1165
Bsp143I	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
Bsp19I	CCATGG	1 cut(s)	1437
BspACI	CCGC	1 cut(s)	884
BspANI	GGCC	2 cut(s)	774, 887
BspCNI	CTCAG	5 cut(s)	403, 847, 993, 1071, 1460
BspDI	ATCGAT	1 cut(s)	259
BspLI	GGNNCC	2 cut(s)	45, 557
BspMAI	CTGCAG	1 cut(s)	1420
BspPI	GGATC	1 cut(s)	1307
BspT104I	TTCGAA	1 cut(s)	782
BspTI	CTTAAG	1 cut(s)	245
BsrDI	GCAATG	1 cut(s)	693
BsrFI	RCCGGY	1 cut(s)	1427
BsrI	ACTGG	4 cut(s)	599, 679, 712, 1279
BssAI	RCCGGY	1 cut(s)	1427
BssECI	CCNNGG	4 cut(s)	655, 769, 1320, 1437
BssMI	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
BssT1I	CCWWGG	3 cut(s)	769, 1320, 1437
Bst2UI	CCWGG	1 cut(s)	656
Bst4CI	ACNGT	5 cut(s)	116, 287, 485, 718, 1457
Bst6I	CTCTTC	1 cut(s)	390
BstAFI	CTTAAG	1 cut(s)	245
BstAPI	GCANNNNNTGC	3 cut(s)	302, 1424, 1490
BstBAI	YACGTR	1 cut(s)	206
BstBI	TTCGAA	1 cut(s)	782
BstC8I	GCNNGC	5 cut(s)	294, 1347, 1416, 1425, 1429
BstDEI	CTNAG	7 cut(s)	66, 411, 834, 1001, 1079, 1166, 1447
BstDSI	CCRYGG	1 cut(s)	1437
BstEII	GGTNACC	1 cut(s)	385
BstENI	CCTNNNNNAGG	2 cut(s)	395, 878
BstF5I	GGATG	3 cut(s)	583, 1073, 1349
BstH2I	RGCGCY	1 cut(s)	411
BstHHI	GCGC	1 cut(s)	410
BstKTI	GATC	6 cut(s)	259, 263, 348, 451, 670, 1315
BstMAI	GTCTC	2 cut(s)	70, 971
BstMBI	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
BstMCI	CGRYCG	3 cut(s)	259, 670, 888
BstMWI	GCNNNNNNNGC	9 cut(s)	182, 302, 314, 1022, 1031, 1196, 1420, 1424, 1490
BstNI	CCWGG	1 cut(s)	656
BstNSI	RCATGY	1 cut(s)	1349
BstPI	GGTNACC	1 cut(s)	385
BstSCI	CCNGG	1 cut(s)	654
BstSFI	CTRYAG	1 cut(s)	1416
BstV1I	GCAGC	7 cut(s)	73, 95, 188, 317, 1046, 1255, 1285
BstV2I	GAAGAC	2 cut(s)	288, 624
BstZI	CGGCCG	1 cut(s)	885
Bsu15I	ATCGAT	1 cut(s)	259
BsuI	GTATCC	2 cut(s)	587, 1253
BsuRI	GGCC	2 cut(s)	774, 887
BsuTUI	ATCGAT	1 cut(s)	259
BtgI	CCRYGG	1 cut(s)	1437
BtsCI	GGATG	3 cut(s)	583, 1073, 1349
BtsI	GCAGTG	2 cut(s)	1425, 1488
BtsIMutI	CAGTG	8 cut(s)	292, 477, 490, 1228, 1272, 1425, 1483, 1488
Cac8I	GCNNGC	5 cut(s)	294, 1347, 1416, 1425, 1429
CaiI	CAGNNNCTG	2 cut(s)	1415, 1424
CfoI	GCGC	1 cut(s)	410
Cfr10I	RCCGGY	1 cut(s)	1427
Cfr13I	GGNCC	3 cut(s)	43, 556, 766
ClaI	ATCGAT	1 cut(s)	259
CseI	GACGC	1 cut(s)	1109
Csp6I	GTAC	3 cut(s)	117, 682, 831
CspCI	CAANNNNNGTGG	6 cut(s)	112, 147, 799, 834, 1305, 1340
CviAII	CATG	4 cut(s)	343, 776, 1346, 1438
CviQI	GTAC	3 cut(s)	117, 682, 831
DdeI	CTNAG	7 cut(s)	66, 411, 834, 1001, 1079, 1166, 1447
DpnI	GATC	6 cut(s)	258, 262, 347, 450, 669, 1314
DpnII	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
EaeI	YGGCCR	1 cut(s)	885
EagI	CGGCCG	1 cut(s)	885
Eam1104I	CTCTTC	1 cut(s)	390
EarI	CTCTTC	1 cut(s)	390
Ecl136II	GAGCTC	2 cut(s)	230, 1163
EclXI	CGGCCG	1 cut(s)	885
Eco130I	CCWWGG	3 cut(s)	769, 1320, 1437
Eco24I	GRGCYC	2 cut(s)	232, 1165
Eco32I	GATATC	1 cut(s)	1150
Eco47I	GGWCC	3 cut(s)	43, 556, 766
Eco47III	AGCGCT	1 cut(s)	409
Eco52I	CGGCCG	1 cut(s)	885
Eco53kI	GAGCTC	2 cut(s)	230, 1163
Eco57I	CTGAAG	2 cut(s)	177, 372
Eco72I	CACGTG	1 cut(s)	206
Eco91I	GGTNACC	1 cut(s)	385
EcoICRI	GAGCTC	2 cut(s)	230, 1163
EcoNI	CCTNNNNNAGG	2 cut(s)	395, 878
EcoO109I	RGGNCCY	3 cut(s)	43, 556, 766
EcoO65I	GGTNACC	1 cut(s)	385
EcoRI	GAATTC	1 cut(s)	1466
EcoRII	CCWGG	1 cut(s)	654
EcoRV	GATATC	1 cut(s)	1150
EcoT14I	CCWWGG	3 cut(s)	769, 1320, 1437
EcoT22I	ATGCAT	1 cut(s)	1351
EcoT38I	GRGCYC	2 cut(s)	232, 1165
ErhI	CCWWGG	3 cut(s)	769, 1320, 1437
FaeI	CATG	4 cut(s)	346, 779, 1349, 1441
FalI	AAGNNNNNCTT	6 cut(s)	621, 653, 777, 809, 1101, 1133
FaqI	GGGAC	1 cut(s)	569
FatI	CATG	4 cut(s)	342, 775, 1345, 1437
Fnu4HI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
FokI	GGATG	3 cut(s)	590, 1080, 1336
FriOI	GRGCYC	2 cut(s)	232, 1165
Fsp4HI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
FspBI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
GlaI	GCGC	1 cut(s)	409
GluI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
GsaI	CCCAGC	1 cut(s)	183
GsuI	CTGGAG	1 cut(s)	729
HaeII	RGCGCY	1 cut(s)	411
HaeIII	GGCC	2 cut(s)	774, 887
HapII	CCGG	1 cut(s)	1428
HgaI	GACGC	1 cut(s)	1109
HhaI	GCGC	1 cut(s)	410
Hin1II	CATG	4 cut(s)	346, 779, 1349, 1441
Hin6I	GCGC	1 cut(s)	408
HinP1I	GCGC	1 cut(s)	408
HincII	GTYRAC	2 cut(s)	847, 1099
HindII	GTYRAC	2 cut(s)	847, 1099
HindIII	AAGCTT	2 cut(s)	354, 911
HinfI	GANTC	2 cut(s)	738, 1305
HpaI	GTTAAC	1 cut(s)	847
HpaII	CCGG	1 cut(s)	1428
HphI	GGTGA	5 cut(s)	122, 397, 456, 833, 1339
Hpy166II	GTNNAC	2 cut(s)	847, 1099
Hpy188I	TCNGA	7 cut(s)	725, 1020, 1061, 1080, 1179, 1251, 1381
Hpy188III	TCNNGA	2 cut(s)	836, 1118
Hpy8I	GTNNAC	2 cut(s)	847, 1099
HpyAV	CCTTC	4 cut(s)	152, 370, 1040, 1222
HpyCH4III	ACNGT	5 cut(s)	116, 287, 485, 718, 1457
HpyCH4IV	ACGT	3 cut(s)	7, 205, 1461
HpyF10VI	GCNNNNNNNGC	9 cut(s)	182, 302, 314, 1022, 1031, 1196, 1420, 1424, 1490
HpyF3I	CTNAG	7 cut(s)	66, 411, 834, 1001, 1079, 1166, 1447
HpySE526I	ACGT	3 cut(s)	7, 205, 1461
Hsp92II	CATG	4 cut(s)	346, 779, 1349, 1441
HspAI	GCGC	1 cut(s)	408
KroI	GCCGGC	1 cut(s)	1427
KroNI	GCCGGC	1 cut(s)	1429
KspAI	GTTAAC	1 cut(s)	847
Kzo9I	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
LmnI	GCTCC	3 cut(s)	62, 965, 1142
Lsp1109I	GCAGC	7 cut(s)	73, 95, 188, 317, 1046, 1255, 1285
LweI	GCATC	5 cut(s)	568, 1003, 1058, 1097, 1358
MaeI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
MaeII	ACGT	3 cut(s)	7, 205, 1461
MaeIII	GTNAC	6 cut(s)	110, 385, 475, 1169, 1241, 1457
MalI	GATC	6 cut(s)	258, 262, 347, 450, 669, 1314
MboI	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
MboII	GAAGA	6 cut(s)	293, 407, 629, 1022, 1142, 1298
MfeI	CAATTG	1 cut(s)	813
MhlI	GDGCHC	3 cut(s)	232, 970, 1165
MluCI	AATT	9 cut(s)	325, 443, 540, 606, 813, 864, 1181, 1466, 1500
MlyI	GAGTC	1 cut(s)	732
MmeI	TCCRAC	6 cut(s)	18, 736, 943, 1039, 1120, 1340
Mph1103I	ATGCAT	1 cut(s)	1351
MroNI	GCCGGC	1 cut(s)	1427
MroXI	GAANNNNTTC	1 cut(s)	1367
MspA1I	CMGCKG	4 cut(s)	86, 179, 308, 1037
MspCI	CTTAAG	1 cut(s)	245
MspI	CCGG	1 cut(s)	1428
MspR9I	CCNGG	1 cut(s)	656
MunI	CAATTG	1 cut(s)	813
Mva1269I	GAATGC	3 cut(s)	444, 1027, 1201
MvaI	CCWGG	1 cut(s)	656
MwoI	GCNNNNNNNGC	9 cut(s)	182, 302, 314, 1022, 1031, 1196, 1420, 1424, 1490
NaeI	GCCGGC	1 cut(s)	1429
NcoI	CCATGG	1 cut(s)	1437
NdeII	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
NgoMIV	GCCGGC	1 cut(s)	1427
NlaIII	CATG	4 cut(s)	346, 779, 1349, 1441
NlaIV	GGNNCC	2 cut(s)	45, 557
NmeAIII	GCCGAG	1 cut(s)	913
NmuCI	GTSAC	4 cut(s)	110, 385, 475, 1241
NsiI	ATGCAT	1 cut(s)	1351
NspI	RCATGY	1 cut(s)	1349
NspV	TTCGAA	1 cut(s)	782
PaeI	GCATGC	1 cut(s)	1349
PctI	GAATGC	3 cut(s)	444, 1027, 1201
PdiI	GCCGGC	1 cut(s)	1429
PdmI	GAANNNNTTC	1 cut(s)	1367
PfeI	GAWTC	1 cut(s)	1305
PkrI	GCNGC	8 cut(s)	85, 88, 178, 307, 886, 1036, 1270, 1300
Ple19I	CGATCG	2 cut(s)	259, 670
PleI	GAGTC	1 cut(s)	732
PmaCI	CACGTG	1 cut(s)	206
PmlI	CACGTG	1 cut(s)	206
PpsI	GAGTC	1 cut(s)	732
Ppu21I	YACGTR	1 cut(s)	206
PpuMI	RGGWCCY	3 cut(s)	43, 556, 766
PshBI	ATTAAT	1 cut(s)	1184
Psp124BI	GAGCTC	2 cut(s)	232, 1165
Psp5II	RGGWCCY	3 cut(s)	43, 556, 766
Psp6I	CCWGG	1 cut(s)	654
PspCI	CACGTG	1 cut(s)	206
PspEI	GGTNACC	1 cut(s)	385
PspFI	CCCAGC	1 cut(s)	179
PspGI	CCWGG	1 cut(s)	654
PspN4I	GGNNCC	2 cut(s)	45, 557
PspPI	GGNCC	3 cut(s)	43, 556, 766
PspPPI	RGGWCCY	3 cut(s)	43, 556, 766
PstI	CTGCAG	1 cut(s)	1420
PstNI	CAGNNNCTG	2 cut(s)	1415, 1424
PvuI	CGATCG	2 cut(s)	259, 670
PvuII	CAGCTG	4 cut(s)	86, 179, 308, 1037
RsaI	GTAC	3 cut(s)	118, 683, 832
RsaNI	GTAC	3 cut(s)	117, 682, 831
SacI	GAGCTC	2 cut(s)	232, 1165
SatI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
Sau3AI	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
Sau96I	GGNCC	3 cut(s)	43, 556, 766
ScaI	AGTACT	1 cut(s)	832
SchI	GAGTC	1 cut(s)	732
ScrFI	CCNGG	1 cut(s)	656
SduI	GDGCHC	3 cut(s)	232, 970, 1165
SfaNI	GCATC	5 cut(s)	568, 1003, 1058, 1097, 1358
SfcI	CTRYAG	1 cut(s)	1416
SfuI	TTCGAA	1 cut(s)	782
SinI	GGWCC	3 cut(s)	43, 556, 766
SmlI	CTYRAG	1 cut(s)	245
SmoI	CTYRAG	1 cut(s)	245
SphI	GCATGC	1 cut(s)	1349
Sse9I	AATT	9 cut(s)	325, 443, 540, 606, 813, 864, 1181, 1466, 1500
SsiI	CCGC	1 cut(s)	884
SspI	AATATT	1 cut(s)	58
SspMI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
SstI	GAGCTC	2 cut(s)	232, 1165
StyD4I	CCNGG	1 cut(s)	654
StyI	CCWWGG	3 cut(s)	769, 1320, 1437
TaaI	ACNGT	5 cut(s)	116, 287, 485, 718, 1457
TaiI	ACGT	3 cut(s)	10, 208, 1464
TaqI	TCGA	3 cut(s)	259, 666, 782
TasI	AATT	9 cut(s)	325, 443, 540, 606, 813, 864, 1181, 1466, 1500
TatI	WGTACW	1 cut(s)	830
TauI	GCSGC	1 cut(s)	887
TfiI	GAWTC	1 cut(s)	1305
TscAI	CASTG	8 cut(s)	292, 484, 490, 1228, 1279, 1425, 1483, 1495
TseFI	GTSAC	4 cut(s)	110, 385, 475, 1241
TseI	GCWGC	7 cut(s)	83, 86, 176, 305, 1034, 1268, 1298
Tsp45I	GTSAC	4 cut(s)	110, 385, 475, 1241
TspDTI	ATGAA	6 cut(s)	17, 345, 915, 933, 1143, 1299
TspRI	CASTG	8 cut(s)	292, 484, 490, 1228, 1279, 1425, 1483, 1495
Vha464I	CTTAAG	1 cut(s)	245
VpaK11BI	GGWCC	3 cut(s)	43, 556, 766
VspI	ATTAAT	1 cut(s)	1184
XagI	CCTNNNNNAGG	2 cut(s)	395, 878
XapI	RAATTY	1 cut(s)	1466
XceI	RCATGY	1 cut(s)	1349
XmaJI	CCTAGG	1 cut(s)	769
XmnI	GAANNNNTTC	1 cut(s)	1367
XspI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
ZrmI	AGTACT	1 cut(s)	832
Zsp2I	ATGCAT	1 cut(s)	1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.