Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0005260

Physical Location & Seq

Genomic Coordinates Reverse (-)

92793248 .. 92796725

Gene Structure 3478 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG540000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1797 bp

ATGACTTCAGTTGGCTCATTGGCTGCTCCCAGTGGCCGTGTCGGCGCTGATAAGAAATTTGACACCTTGTCGTCTCGTGCTTCCATTTCTTCATTCTCATTCTCCAAGAGGCCCAATGTAGCTCTCAGGAGGACACGTTCCCCTAGAGTCTCCGCCATGGCCAAGGAGTTGCATTTCAACAAGGATGGTTCTGCCATCAAGAAGCTACAAACTGGTGTCAACAAGCTTGCTGACCTTGTTGGGGTTACCCTTGGTCCCAAGGGGAGGAATGTTGTTCTAGAGAGCAAGTACGGTTCCCCCAAAATTGTTAACGATGGTGTGACCGTGGCCAAAGAGGTTGAGTTGGAGGACCCTGTTGAGAACATTGGAGCTAAGTTGGTAAGGCAGGCAGCTGCCAAGACTAATGACTTGGCTGGTGACGGGACAACAACTTCTGTTGTTCTTGCACAAGGTCTTATAGCTGAAGGTGTCAAGGTTGTTGCAGCTGGAGCAAACCCTGTTCTAATCACACGTGGCATTGAGAAGACAACAAAAGCTCTTGTACGTGAGCTTAAGTTGATGTCCAAAGAGGTTGAAGACAGCGAACTAGCAGATGTGGCTGCTGTCAGTGCAGGAAACAACTATGAAGTAGGACAAATGATTGCTGAAGCCTTGAGTAAGGTGGGTCGAAAGGGTGTTGTGACACTTGAAGAGGGGAAAAGTGCTGAGAACAGTCTTTATGTTGTTGAAGGAATGCAATTTGATCGTGGTTATATCTCACCTTACTTCGTCACTGATAGCGAGAAAATGGCTGTTGAATATGAGAACTGCAAGCTGCTTCTTGTTGATAAAAAGATAACAAATGCAAGAGACCTTGTTAACATTTTGGAGGATGCTATAAGAGGAGGATACCCAGTTGTGATAATTGCCGAAGACATTGAACAAGAAGCTCTGGCAACTCTTGTTGTGAACAAGCTCAGAGGATCTCTAAAGATTGCTGCCCTAAAAGCTCCTGGATTTGGAGATCGCAAGAGCCAGTATCTCGATGATATTGCTATATTGACCGGAGGAACTGTGATCAGAGAAGAGGTGGGGCTTACATTGGACAACGTTGGGAAGGAGGTCCTTGGCCACGCTTCAAAGGTGGTGCTTACAAAGGATACCAGCACAATTGTTGGTGATGGAAGTACCCAGGAAGCAGTTAACAAAAGAGTGGCACAAATTAAAAACCTTATTGAGGCTGCAGAGCAGGAGTATGAAAAGGAAAAACTTAGTGAAAGGATTGCAAAACTATCTGGTGGTGTTGCCGTGATACAGGTCGGAGCACAAACTGAGACAGAGCTGAAAGAAAAGAAACTTAGAGTTGAAGATGCTCTCAATGCAACAAAGGCAGCTGTTGAGGAGGGTATTGTTGTTGGAGGAGGATGCACCCTTCTGAGGTTGGCTGCAAAGGTTGATGCAATTAAGAATGCTCTTGATAATGACGAAGAAAAGGTTGGAGCAGATATTGTTAAAAGAGCTCTTATTTACCCTCTGAAATTGATAGCCAAGAATGCTGGTGTGAATGGAAGTGTGGTCAGTGAGAAGGTGCTCTCTAGCGACAACTTTAAGTACGGATATAATGCTGCAACTGGAAACTATGAAGATTTAATGGCTGCTGGAATCATTGATCCTACCAAGGTGGTGAGATGTTGCCTGGAGCATGCTTCCTCTGTGGCAAAAACTTTCTTAATGTCGGACTGTGTAGTTGTTGAGATCAAGGAGCCGGAGCCAGTGCCTGCTGCAAACCCCATGGACAACTCAGGATACGGTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005829 GO:0005840 GO:0006457 GO:0006458 GO:0006996 GO:0007005 GO:0008150 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0022626 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044183 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0051082 GO:0061077 GO:0070013 GO:0071840 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko04940 ko05134 ko05152 map03018 map04212 map04940 map05134 map05152

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

598

Amino Acids

63.55

Weight (kDa)

5.85

Isoelectric Point (pI)

27.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	76 - 578	2.7e-83	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55490 AT1G55490 AT1G55490 AT1G55490 AT1G55490 AT3G13470 AT5G56500 AT5G56500
fragaria_vesca	FvH4_3g45800 FvH4_3g45800 FvH4_3g45800 FvH4_3g45800
malus_domestica	MD03G1002900.v1.1 MD11G1002700.v1.1
prunus_persica	Prupe.6G002500_v2.0.a1 Prupe.6G002500_v2.0.a1
pyrus_communis	pycom03g00280 pycom11g00250
rosa_chinensis	RchiOBHm_Chr5g0083881
rosa_laevigata	RLG00000037061
rosa_multiflora	Rmu_sc0001287.1_g000043
rosa_roxburghii	Rroxscaffold_1G00000710
rosa_rugosa	Rorug05G0487100 Rorug05G0487200
rosa_samantha	Rh5AG540000 Rh5BG565200 Rh5CG587000 Rh5DG573600
rosa_wichuraiana	Rw5G050210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	153
AclI	AACGTT	1 cut(s)	1089
AclWI	GGATC	2 cut(s)	970, 1643
AcoI	YGGCCR	4 cut(s)	34, 159, 327, 1108
AcsI	RAATTY	1 cut(s)	56
AcuI	CTGAAG	2 cut(s)	483, 666
AcvI	CACGTG	1 cut(s)	512
AfaI	GTAC	4 cut(s)	290, 543, 1168, 1592
AfiI	CCNNNNNNNGG	5 cut(s)	241, 264, 998, 1216, 1416
AflII	CTTAAG	1 cut(s)	551
AflIII	ACRYGT	2 cut(s)	134, 509
AgsI	TTSAA	8 cut(s)	178, 575, 689, 728, 797, 920, 1119, 1346
AhdI	GACNNNNNGTC	1 cut(s)	67
AjnI	CCWGG	3 cut(s)	991, 1170, 1674
AjuI	GAANNNNNNNTTGG	2 cut(s)	1458, 1490
AloI	GAACNNNNNNTCC	2 cut(s)	121, 153
Alw21I	GWGCWC	3 cut(s)	1306, 1501, 1572
Alw26I	GTCTC	4 cut(s)	78, 154, 843, 1307
AlwI	GGATC	2 cut(s)	970, 1643
AlwNI	CAGNNNCTG	1 cut(s)	1757
AoxI	GGCC	5 cut(s)	34, 110, 159, 327, 1108
ApoI	RAATTY	1 cut(s)	56
AspLEI	GCGC	1 cut(s)	47
AspS9I	GGNCC	4 cut(s)	111, 254, 349, 1102
AsuHPI	GGTGA	4 cut(s)	428, 750, 1169, 1675
AvaII	GGWCC	3 cut(s)	254, 349, 1102
BalI	TGGCCA	3 cut(s)	161, 329, 1110
BanII	GRGCYC	1 cut(s)	1501
BauI	CACGAG	1 cut(s)	75
BbrPI	CACGTG	1 cut(s)	512
BbsI	GAAGAC	3 cut(s)	530, 582, 918
Bbv12I	GWGCWC	3 cut(s)	1306, 1501, 1572
BccI	CCATC	4 cut(s)	179, 203, 308, 1154
BceAI	ACGGC	2 cut(s)	21, 1271
BcgI	CGANNNNNNTGC	4 cut(s)	725, 759, 1013, 1047
BciT130I	CCWGG	3 cut(s)	993, 1172, 1676
BciVI	GTATCC	3 cut(s)	881, 1132, 1778
BclI	TGATCA	1 cut(s)	1056
BcoDI	GTCTC	4 cut(s)	78, 154, 843, 1307
BfaI	CTAG	4 cut(s)	144, 278, 587, 1575
BfmI	CTRYAG	1 cut(s)	1221
BfoI	RGCGCY	1 cut(s)	48
BfrI	CTTAAG	1 cut(s)	551
BfuI	GTATCC	3 cut(s)	881, 1132, 1778
BglI	GCCNNNNNGGC	1 cut(s)	42
Bme1390I	CCNGG	3 cut(s)	993, 1172, 1676
Bme18I	GGWCC	3 cut(s)	254, 349, 1102
BmeRI	GACNNNNNGTC	1 cut(s)	67
BmgT120I	GGNCC	4 cut(s)	111, 254, 349, 1102
BmiI	GGNNCC	5 cut(s)	256, 295, 351, 1743, 1749
BmrFI	CCNGG	3 cut(s)	993, 1172, 1676
BmrI	ACTGGG	2 cut(s)	24, 887
BmsI	GCATC	4 cut(s)	862, 1339, 1394, 1426
BmuI	ACTGGG	2 cut(s)	24, 887
BpiI	GAAGAC	3 cut(s)	530, 582, 918
BpmI	CTGGAG	2 cut(s)	507, 1697
BpuEI	CTTGAG	1 cut(s)	673
BsaAI	YACGTR	2 cut(s)	512, 545
BsaI	GGTCTC	1 cut(s)	843
BsaJI	CCNNGG	9 cut(s)	156, 162, 250, 258, 324, 1105, 1170, 1656, 1770
BsaWI	WCCGGW	1 cut(s)	1043
BsaXI	ACNNNNNCTCC	4 cut(s)	121, 151, 1038, 1068
Bsc4I	CCNNNNNNNGG	5 cut(s)	241, 264, 998, 1216, 1416
Bse1I	ACTGG	6 cut(s)	30, 217, 893, 1015, 1615, 1751
BseBI	CCWGG	3 cut(s)	993, 1172, 1676
BseDI	CCNNGG	9 cut(s)	156, 162, 250, 258, 324, 1105, 1170, 1656, 1770
BseGI	GGATG	3 cut(s)	190, 877, 1409
BseLI	CCNNNNNNNGG	5 cut(s)	241, 264, 998, 1216, 1416
BseMII	CTCAG	6 cut(s)	139, 696, 970, 1302, 1406, 1794
BseNI	ACTGG	6 cut(s)	30, 217, 893, 1015, 1615, 1751
BseRI	GAGGAG	3 cut(s)	897, 1394, 1413
BsgI	GTGCAG	1 cut(s)	630
BshFI	GGCC	5 cut(s)	36, 112, 161, 329, 1110
BsiHKAI	GWGCWC	3 cut(s)	1306, 1501, 1572
BsiSI	CCGG	2 cut(s)	1044, 1745
BslFI	GGGAC	2 cut(s)	240, 436
BslI	CCNNNNNNNGG	5 cut(s)	241, 264, 998, 1216, 1416
BsmAI	GTCTC	4 cut(s)	78, 154, 843, 1307
BsmBI	CGTCTC	1 cut(s)	78
BsmFI	GGGAC	2 cut(s)	240, 436
BsmI	GAATGC	3 cut(s)	738, 1453, 1537
BsnI	GGCC	5 cut(s)	36, 112, 161, 329, 1110
Bso31I	GGTCTC	1 cut(s)	843
Bsp1286I	GDGCHC	3 cut(s)	1306, 1501, 1572
Bsp143I	GATC	6 cut(s)	742, 962, 1003, 1056, 1648, 1734
Bsp19I	CCATGG	2 cut(s)	156, 1770
BspACI	CCGC	1 cut(s)	153
BspANI	GGCC	5 cut(s)	36, 112, 161, 329, 1110
BspCNI	CTCAG	6 cut(s)	138, 697, 969, 1303, 1407, 1793
BspLI	GGNNCC	5 cut(s)	256, 295, 351, 1743, 1749
BspMAI	CTGCAG	1 cut(s)	1225
BspPI	GGATC	2 cut(s)	970, 1643
BspTI	CTTAAG	1 cut(s)	551
BspTNI	GGTCTC	1 cut(s)	843
BsrI	ACTGG	6 cut(s)	30, 217, 893, 1015, 1615, 1751
BssECI	CCNNGG	9 cut(s)	156, 162, 250, 258, 324, 1105, 1170, 1656, 1770
BssMI	GATC	6 cut(s)	742, 962, 1003, 1056, 1648, 1734
BssSI	CACGAG	1 cut(s)	75
BssT1I	CCWWGG	7 cut(s)	156, 162, 250, 258, 1105, 1656, 1770
Bst2BI	CACGAG	1 cut(s)	75
Bst2UI	CCWGG	3 cut(s)	993, 1172, 1676
Bst4CI	ACNGT	6 cut(s)	293, 325, 713, 1054, 1721, 1790
Bst6I	CTCTTC	2 cut(s)	684, 1059
BstAFI	CTTAAG	1 cut(s)	551
BstBAI	YACGTR	2 cut(s)	512, 545
BstC8I	GCNNGC	5 cut(s)	228, 387, 812, 1683, 1758
BstDEI	CTNAG	9 cut(s)	125, 372, 705, 956, 1250, 1311, 1337, 1415, 1780
BstDSI	CCRYGG	3 cut(s)	156, 324, 1770
BstEII	GGTNACC	1 cut(s)	244
BstENI	CCTNNNNNAGG	1 cut(s)	1214
BstF5I	GGATG	3 cut(s)	190, 877, 1409
BstH2I	RGCGCY	1 cut(s)	48
BstHHI	GCGC	1 cut(s)	47
BstKTI	GATC	6 cut(s)	745, 965, 1006, 1059, 1651, 1737
BstMAI	GTCTC	4 cut(s)	78, 154, 843, 1307
BstMBI	GATC	6 cut(s)	742, 962, 1003, 1056, 1648, 1734
BstMWI	GCNNNNNNNGC	8 cut(s)	42, 488, 596, 608, 986, 1358, 1367, 1532
BstNI	CCWGG	3 cut(s)	993, 1172, 1676
BstNSI	RCATGY	1 cut(s)	1685
BstPI	GGTNACC	1 cut(s)	244
BstSCI	CCNGG	3 cut(s)	991, 1170, 1674
BstSFI	CTRYAG	1 cut(s)	1221
BstV2I	GAAGAC	3 cut(s)	530, 582, 918
BstX2I	RGATCY	1 cut(s)	962
BstYI	RGATCY	1 cut(s)	962
BsuI	GTATCC	3 cut(s)	881, 1132, 1778
BsuRI	GGCC	5 cut(s)	36, 112, 161, 329, 1110
BtgI	CCRYGG	3 cut(s)	156, 324, 1770
BtsCI	GGATG	3 cut(s)	190, 877, 1409
BtsIMutI	CAGTG	5 cut(s)	37, 613, 771, 1564, 1758
Cac8I	GCNNGC	5 cut(s)	228, 387, 812, 1683, 1758
CaiI	CAGNNNCTG	1 cut(s)	1757
CfoI	GCGC	1 cut(s)	47
Cfr13I	GGNCC	4 cut(s)	111, 254, 349, 1102
Csp6I	GTAC	4 cut(s)	289, 542, 1167, 1591
CviAII	CATG	3 cut(s)	157, 1682, 1771
CviQI	GTAC	4 cut(s)	289, 542, 1167, 1591
DdeI	CTNAG	9 cut(s)	125, 372, 705, 956, 1250, 1311, 1337, 1415, 1780
DpnI	GATC	6 cut(s)	744, 964, 1005, 1058, 1650, 1736
DpnII	GATC	6 cut(s)	742, 962, 1003, 1056, 1648, 1734
DriI	GACNNNNNGTC	1 cut(s)	67
EaeI	YGGCCR	4 cut(s)	34, 159, 327, 1108
Eam1104I	CTCTTC	2 cut(s)	684, 1059
Eam1105I	GACNNNNNGTC	1 cut(s)	67
EarI	CTCTTC	2 cut(s)	684, 1059
EciI	GGCGGA	1 cut(s)	142
Ecl136II	GAGCTC	1 cut(s)	1499
Eco130I	CCWWGG	7 cut(s)	156, 162, 250, 258, 1105, 1656, 1770
Eco24I	GRGCYC	1 cut(s)	1501
Eco31I	GGTCTC	1 cut(s)	843
Eco47I	GGWCC	3 cut(s)	254, 349, 1102
Eco53kI	GAGCTC	1 cut(s)	1499
Eco57I	CTGAAG	2 cut(s)	483, 666
Eco72I	CACGTG	1 cut(s)	512
Eco91I	GGTNACC	1 cut(s)	244
EcoICRI	GAGCTC	1 cut(s)	1499
EcoNI	CCTNNNNNAGG	1 cut(s)	1214
EcoO109I	RGGNCCY	2 cut(s)	349, 1102
EcoO65I	GGTNACC	1 cut(s)	244
EcoRII	CCWGG	3 cut(s)	991, 1170, 1674
EcoT14I	CCWWGG	7 cut(s)	156, 162, 250, 258, 1105, 1656, 1770
EcoT38I	GRGCYC	1 cut(s)	1501
ErhI	CCWWGG	7 cut(s)	156, 162, 250, 258, 1105, 1656, 1770
Esp3I	CGTCTC	1 cut(s)	78
FaeI	CATG	3 cut(s)	160, 1685, 1774
FaqI	GGGAC	2 cut(s)	240, 436
FatI	CATG	3 cut(s)	156, 1681, 1770
FbaI	TGATCA	1 cut(s)	1056
FokI	GGATG	3 cut(s)	197, 884, 1416
FriOI	GRGCYC	1 cut(s)	1501
FspBI	CTAG	4 cut(s)	144, 278, 587, 1575
GlaI	GCGC	1 cut(s)	46
GsuI	CTGGAG	2 cut(s)	507, 1697
HaeII	RGCGCY	1 cut(s)	48
HaeIII	GGCC	5 cut(s)	36, 112, 161, 329, 1110
HapII	CCGG	2 cut(s)	1044, 1745
HhaI	GCGC	1 cut(s)	47
Hin1II	CATG	3 cut(s)	160, 1685, 1774
Hin6I	GCGC	1 cut(s)	45
HinP1I	GCGC	1 cut(s)	45
HincII	GTYRAC	4 cut(s)	220, 310, 859, 1183
HindII	GTYRAC	4 cut(s)	220, 310, 859, 1183
HindIII	AAGCTT	1 cut(s)	224
HinfI	GANTC	2 cut(s)	147, 1641
HpaI	GTTAAC	3 cut(s)	310, 859, 1183
HpaII	CCGG	2 cut(s)	1044, 1745
HphI	GGTGA	4 cut(s)	428, 750, 1169, 1675
Hpy166II	GTNNAC	5 cut(s)	220, 310, 859, 949, 1183
Hpy188I	TCNGA	6 cut(s)	959, 1061, 1301, 1416, 1515, 1717
Hpy188III	TCNNGA	6 cut(s)	127, 199, 278, 1022, 1454, 1782
Hpy8I	GTNNAC	5 cut(s)	220, 310, 859, 949, 1183
HpyAV	CCTTC	5 cut(s)	458, 722, 1090, 1421, 1558
HpyCH4III	ACNGT	6 cut(s)	293, 325, 713, 1054, 1721, 1790
HpyCH4IV	ACGT	4 cut(s)	136, 511, 544, 1089
HpyF10VI	GCNNNNNNNGC	8 cut(s)	42, 488, 596, 608, 986, 1358, 1367, 1532
HpyF3I	CTNAG	9 cut(s)	125, 372, 705, 956, 1250, 1311, 1337, 1415, 1780
HpySE526I	ACGT	4 cut(s)	136, 511, 544, 1089
Hsp92II	CATG	3 cut(s)	160, 1685, 1774
HspAI	GCGC	1 cut(s)	45
Ksp22I	TGATCA	1 cut(s)	1056
KspAI	GTTAAC	3 cut(s)	310, 859, 1183
Kzo9I	GATC	6 cut(s)	742, 962, 1003, 1056, 1648, 1734
LmnI	GCTCC	9 cut(s)	31, 368, 488, 994, 1301, 1478, 1678, 1741, 1747
LweI	GCATC	4 cut(s)	862, 1339, 1394, 1426
MaeI	CTAG	4 cut(s)	144, 278, 587, 1575
MaeII	ACGT	4 cut(s)	136, 511, 544, 1089
MaeIII	GTNAC	6 cut(s)	244, 319, 416, 679, 769, 1790
MalI	GATC	6 cut(s)	744, 964, 1005, 1058, 1650, 1736
MboI	GATC	6 cut(s)	742, 962, 1003, 1056, 1648, 1734
MboII	GAAGA	9 cut(s)	81, 535, 587, 701, 923, 1076, 1358, 1478, 1634
MfeI	CAATTG	1 cut(s)	1149
MflI	RGATCY	1 cut(s)	962
MhlI	GDGCHC	3 cut(s)	1306, 1501, 1572
MlsI	TGGCCA	3 cut(s)	161, 329, 1110
MluCI	AATT	8 cut(s)	56, 303, 737, 903, 1149, 1200, 1440, 1517
MluNI	TGGCCA	3 cut(s)	161, 329, 1110
MlyI	GAGTC	1 cut(s)	156
MmeI	TCCRAC	5 cut(s)	324, 1279, 1375, 1456, 1695
Mox20I	TGGCCA	3 cut(s)	161, 329, 1110
MscI	TGGCCA	3 cut(s)	161, 329, 1110
Msp20I	TGGCCA	3 cut(s)	161, 329, 1110
MspA1I	CMGCKG	3 cut(s)	392, 485, 1373
MspCI	CTTAAG	1 cut(s)	551
MspI	CCGG	2 cut(s)	1044, 1745
MspR9I	CCNGG	3 cut(s)	993, 1172, 1676
MunI	CAATTG	1 cut(s)	1149
Mva1269I	GAATGC	3 cut(s)	738, 1453, 1537
MvaI	CCWGG	3 cut(s)	993, 1172, 1676
MwoI	GCNNNNNNNGC	8 cut(s)	42, 488, 596, 608, 986, 1358, 1367, 1532
NcoI	CCATGG	2 cut(s)	156, 1770
NdeII	GATC	6 cut(s)	742, 962, 1003, 1056, 1648, 1734
NlaIII	CATG	3 cut(s)	160, 1685, 1774
NlaIV	GGNNCC	5 cut(s)	256, 295, 351, 1743, 1749
NmuCI	GTSAC	4 cut(s)	319, 416, 679, 769
NspI	RCATGY	1 cut(s)	1685
PaeI	GCATGC	1 cut(s)	1685
PctI	GAATGC	3 cut(s)	738, 1453, 1537
PfeI	GAWTC	1 cut(s)	1641
PfoI	TCCNGGA	1 cut(s)	991
PleI	GAGTC	1 cut(s)	155
PmaCI	CACGTG	1 cut(s)	512
PmlI	CACGTG	1 cut(s)	512
PpsI	GAGTC	1 cut(s)	155
Ppu21I	YACGTR	2 cut(s)	512, 545
PpuMI	RGGWCCY	2 cut(s)	349, 1102
Psp124BI	GAGCTC	1 cut(s)	1501
Psp1406I	AACGTT	1 cut(s)	1089
Psp5II	RGGWCCY	2 cut(s)	349, 1102
Psp6I	CCWGG	3 cut(s)	991, 1170, 1674
PspCI	CACGTG	1 cut(s)	512
PspEI	GGTNACC	1 cut(s)	244
PspGI	CCWGG	3 cut(s)	991, 1170, 1674
PspN4I	GGNNCC	5 cut(s)	256, 295, 351, 1743, 1749
PspPI	GGNCC	4 cut(s)	111, 254, 349, 1102
PspPPI	RGGWCCY	2 cut(s)	349, 1102
PstI	CTGCAG	1 cut(s)	1225
PstNI	CAGNNNCTG	1 cut(s)	1757
PsuI	RGATCY	1 cut(s)	962
PvuII	CAGCTG	3 cut(s)	392, 485, 1373
RsaI	GTAC	4 cut(s)	290, 543, 1168, 1592
RsaNI	GTAC	4 cut(s)	289, 542, 1167, 1591
SacI	GAGCTC	1 cut(s)	1501
Sau3AI	GATC	6 cut(s)	742, 962, 1003, 1056, 1648, 1734
Sau96I	GGNCC	4 cut(s)	111, 254, 349, 1102
SchI	GAGTC	1 cut(s)	156
ScrFI	CCNGG	3 cut(s)	993, 1172, 1676
SduI	GDGCHC	3 cut(s)	1306, 1501, 1572
SfaNI	GCATC	4 cut(s)	862, 1339, 1394, 1426
SfcI	CTRYAG	1 cut(s)	1221
SinI	GGWCC	3 cut(s)	254, 349, 1102
SmlI	CTYRAG	2 cut(s)	551, 652
SmoI	CTYRAG	2 cut(s)	551, 652
SphI	GCATGC	1 cut(s)	1685
Sse9I	AATT	8 cut(s)	56, 303, 737, 903, 1149, 1200, 1440, 1517
SsiI	CCGC	1 cut(s)	153
SspMI	CTAG	4 cut(s)	144, 278, 587, 1575
SstI	GAGCTC	1 cut(s)	1501
StyD4I	CCNGG	3 cut(s)	991, 1170, 1674
StyI	CCWWGG	7 cut(s)	156, 162, 250, 258, 1105, 1656, 1770
TaaI	ACNGT	6 cut(s)	293, 325, 713, 1054, 1721, 1790
TaiI	ACGT	4 cut(s)	139, 514, 547, 1092
TaqI	TCGA	2 cut(s)	667, 1023
TasI	AATT	8 cut(s)	56, 303, 737, 903, 1149, 1200, 1440, 1517
TfiI	GAWTC	1 cut(s)	1641
TscAI	CASTG	5 cut(s)	37, 613, 778, 1564, 1758
TseFI	GTSAC	4 cut(s)	319, 416, 679, 769
Tsp45I	GTSAC	4 cut(s)	319, 416, 679, 769
TspDTI	ATGAA	4 cut(s)	81, 639, 1251, 1635
TspGWI	ACGGA	1 cut(s)	1608
TspRI	CASTG	5 cut(s)	37, 613, 778, 1564, 1758
Vha464I	CTTAAG	1 cut(s)	551
VpaK11BI	GGWCC	3 cut(s)	254, 349, 1102
XagI	CCTNNNNNAGG	1 cut(s)	1214
XapI	RAATTY	1 cut(s)	56
XbaI	TCTAGA	1 cut(s)	277
XceI	RCATGY	1 cut(s)	1685
XspI	CTAG	4 cut(s)	144, 278, 587, 1575

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.