Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0005260

Physical Location & Seq

Genomic Coordinates Forward (+)

251716 .. 254645

Gene Structure 2930 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGAAACGTATTCACTTTGTCCAAGAGTTTGTTGAGTTGGAGGACCCTGTTGAGAATATTGGAGCTAAGTTAGTGAGACAGGCAGCTGCCAAGACTAATGACCTAGCTGGTGACGGTACAACCACTTCTGTTGTTCTTGCACAAGGTCTTATTGCTGAAGGTGTCAAGGTGGTTGCAGCTGGGGCAAACCCTGTTTTAATCACACGTGGCATTGAAAAGACCACCAGAGCTCTAGTAAATGAGCTTAAGGAAAACGATCGATCTCCAAAGAGCCTAGTTGAAGACAGTGAGCTGGCAGATGTTGCAGCTGTTAGTGCAGGAAACAATTATGAAGTAGGAAACATGATCGCTGAAGCTTTGAGCAAGGTGGGTAGGAAGGGTGTGGTGACCCTTGAAGAGGGAAAGAGCGCTGAGAACAGCCTGTATGTTGTTGAGGGAATGCAATTTGATCGTGGTTATATCTCACCTTACTTTGTCACTGACAGTGAGAAAATGGCTGTTGAATATGAGAACTGCAAGTTGCTTCTTGTTGATAAAAAAATTACAAATGCAAGGGACCTTATTAACATTTTGGAGGATGCTATTAGAGGAGGATACCCAGTTGTAATTGTTGCAGAAGACATTGAACAAGAAGCTCTTGCAACTCTTGTTCTCCTGGGTTTGGTCGATCGCAAGAGCCAGTACCTTGATGACATTGCTATTCTAACTGGAGGAACTGTCATCAGAGAGGAAGTAGGACTCACATTAGAGAATGTTGGAAAGGAGGTCCTAGGCCATGCTTCGAAAGTGGTTCTTACAAAGGACACCTCCACAATTGTTGGTGATGGAAGTACTCAGGAAGCAGTTAACAAGCGAGTTGCCCAAATTAAGAACCTCATTGAGGCGGCCGAGCAGGACTATGAAAGAGAAAAGCTTAATGAAAGGATTGCAAAACTATCTGGTGGTGTTGCTGTTATACAGGTTGGAGCACAAACAGAGACAGAGCTGAAAGAAAAGAAACTGAGAGTTGAAGATGCTCTGAATGCAACAAAGGCAGCTGTTGAGGAAGGTATTGTTGTCGGAGGTGGATGCACACTTCTGAGGTTAGCATCAAAGGTTGACGCAATCAAAGATACTCTTGATAATGATGAAGAAAAGGTTGGAGCAGATATCGTTAAAAGAGCTCTTAGTTACCCTCTGAAATTAATCGCCAAGAATGCTGGTGTAAATGGAAGTGTTGTCAGTGAGAAGGTGCTTTCAAGTGACAATCCGAAGTATGGATACAATGCTGCCACTGGAAACTATGAAGATTTAATGGCTGCTGGAATCATTGATCCAACCAAGGTGGTGAGATGTTGCCTAGAGCATGCATCCTCTGTTGCGAAAACTTTCTTAATGTCAGATTGTGTAGTTGTTGAGATTAAAGAGCCAGAGCCTGCAGTGCCTGCCGGCAACCCCATGGACAACTCAGGCTACGGTTACGTTGAATTCCTGTTCAGTGTAGCAATCACTGCAAGTATAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005739 GO:0005829 GO:0005840 GO:0006457 GO:0006458 GO:0006996 GO:0007005 GO:0008150 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016020 GO:0016043 GO:0022626 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044183 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0051082 GO:0061077 GO:0070013 GO:0071840 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03018 ko04212 ko04940 ko05134 ko05152 map03018 map04212 map04940 map05134 map05152

Pfam Domains

Protein Families

Cpn60_TCP1

Protein Analysis

502

Amino Acids

53.6

Weight (kDa)

4.8

Isoelectric Point (pI)

25.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cpn60_TCP1	PF00118	12 - 466	3e-68	TCP-1/cpn60 chaperonin family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005260)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G55490 AT1G55490 AT1G55490 AT1G55490 AT1G55490 AT3G13470 AT5G56500 AT5G56500
fragaria_vesca	FvH4_3g45800 FvH4_3g45800 FvH4_3g45800 FvH4_3g45800
malus_domestica	MD03G1002900.v1.1 MD11G1002700.v1.1
prunus_persica	Prupe.6G002500_v2.0.a1 Prupe.6G002500_v2.0.a1
pyrus_communis	pycom03g00280 pycom11g00250
rosa_chinensis	RchiOBHm_Chr5g0083881
rosa_laevigata	RLG00000037061
rosa_multiflora	Rmu_sc0001287.1_g000043
rosa_roxburghii	Rroxscaffold_1G00000710
rosa_rugosa	Rorug05G0487100 Rorug05G0487200
rosa_samantha	Rh5AG540000 Rh5BG565200 Rh5CG587000 Rh5DG573600
rosa_wichuraiana	Rw5G050210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	1 cut(s)	884
AclWI	GGATC	1 cut(s)	1307
AcoI	YGGCCR	1 cut(s)	885
AcsI	RAATTY	1 cut(s)	1466
AcuI	CTGAAG	2 cut(s)	177, 372
AcvI	CACGTG	1 cut(s)	206
AfaI	GTAC	3 cut(s)	118, 683, 832
AfeI	AGCGCT	1 cut(s)	409
AfiI	CCNNNNNNNGG	4 cut(s)	397, 661, 880, 1256
AflII	CTTAAG	1 cut(s)	245
AflIII	ACRYGT	1 cut(s)	203
AgsI	TTSAA	8 cut(s)	215, 281, 395, 503, 626, 1010, 1239, 1466
AjnI	CCWGG	1 cut(s)	654
AjuI	GAANNNNNNNTTGG	2 cut(s)	1122, 1154
Alw21I	GWGCWC	3 cut(s)	232, 970, 1165
Alw26I	GTCTC	2 cut(s)	70, 971
AlwI	GGATC	1 cut(s)	1307
AlwNI	CAGNNNCTG	2 cut(s)	1415, 1424
Aor51HI	AGCGCT	1 cut(s)	409
AoxI	GGCC	2 cut(s)	772, 885
ApeKI	GCWGC	7 cut(s)	83, 86, 176, 305, 1034, 1268, 1298
ApoI	RAATTY	1 cut(s)	1466
AseI	ATTAAT	1 cut(s)	1184
Asp700I	GAANNNNTTC	1 cut(s)	1367
AspA2I	CCTAGG	1 cut(s)	769
AspLEI	GCGC	1 cut(s)	410
AspS9I	GGNCC	3 cut(s)	43, 556, 766
AsuHPI	GGTGA	5 cut(s)	122, 397, 456, 833, 1339
AsuII	TTCGAA	1 cut(s)	782
AvaII	GGWCC	3 cut(s)	43, 556, 766
AvrII	CCTAGG	1 cut(s)	769
BanII	GRGCYC	2 cut(s)	232, 1165
BarI	GAAGNNNNNNTAC	4 cut(s)	109, 141, 1244, 1276
BbrPI	CACGTG	1 cut(s)	206
BbsI	GAAGAC	2 cut(s)	288, 624
Bbv12I	GWGCWC	3 cut(s)	232, 970, 1165
BbvI	GCAGC	7 cut(s)	73, 95, 188, 317, 1046, 1255, 1285
BccI	CCATC	1 cut(s)	818
BcgI	CGANNNNNNTGC	2 cut(s)	431, 465
BciT130I	CCWGG	1 cut(s)	656
BciVI	GTATCC	2 cut(s)	587, 1253
BcoDI	GTCTC	2 cut(s)	70, 971
BfaI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
BfmI	CTRYAG	1 cut(s)	1416
BfoI	RGCGCY	1 cut(s)	411
BfrI	CTTAAG	1 cut(s)	245
BfuI	GTATCC	2 cut(s)	587, 1253
BisI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
BlnI	CCTAGG	1 cut(s)	769
BlsI	GCNGC	8 cut(s)	85, 88, 178, 307, 886, 1036, 1270, 1300
BmcAI	AGTACT	1 cut(s)	832
Bme1390I	CCNGG	1 cut(s)	656
Bme18I	GGWCC	3 cut(s)	43, 556, 766
BmgT120I	GGNCC	3 cut(s)	43, 556, 766
BmiI	GGNNCC	2 cut(s)	45, 557
BmrFI	CCNGG	1 cut(s)	656
BmrI	ACTGGG	1 cut(s)	593
BmsI	GCATC	5 cut(s)	568, 1003, 1058, 1097, 1358
BmuI	ACTGGG	1 cut(s)	593
BpiI	GAAGAC	2 cut(s)	288, 624
BpmI	CTGGAG	1 cut(s)	729
Bpu14I	TTCGAA	1 cut(s)	782
Bsa29I	ATCGAT	1 cut(s)	259
BsaAI	YACGTR	1 cut(s)	206
BsaJI	CCNNGG	4 cut(s)	655, 769, 1320, 1437
BsaXI	ACNNNNNCTCC	2 cut(s)	702, 732
Bsc4I	CCNNNNNNNGG	4 cut(s)	397, 661, 880, 1256
Bse118I	RCCGGY	1 cut(s)	1427
Bse1I	ACTGG	4 cut(s)	599, 679, 712, 1279
Bse3DI	GCAATG	1 cut(s)	693
BseBI	CCWGG	1 cut(s)	656
BseCI	ATCGAT	1 cut(s)	259
BseDI	CCNNGG	4 cut(s)	655, 769, 1320, 1437
BseGI	GGATG	3 cut(s)	583, 1073, 1349
BseLI	CCNNNNNNNGG	4 cut(s)	397, 661, 880, 1256
BseMI	GCAATG	1 cut(s)	693
BseMII	CTCAG	5 cut(s)	402, 848, 992, 1070, 1461
BseNI	ACTGG	4 cut(s)	599, 679, 712, 1279
BseRI	GAGGAG	1 cut(s)	603
BseX3I	CGGCCG	1 cut(s)	885
BseXI	GCAGC	7 cut(s)	73, 95, 188, 317, 1046, 1255, 1285
BseYI	CCCAGC	1 cut(s)	179
BsgI	GTGCAG	1 cut(s)	336
Bsh1285I	CGRYCG	3 cut(s)	259, 670, 888
BshFI	GGCC	2 cut(s)	774, 887
BshVI	ATCGAT	1 cut(s)	259
BsiEI	CGRYCG	3 cut(s)	259, 670, 888
BsiHKAI	GWGCWC	3 cut(s)	232, 970, 1165
BsiSI	CCGG	1 cut(s)	1428
BslFI	GGGAC	1 cut(s)	569
BslI	CCNNNNNNNGG	4 cut(s)	397, 661, 880, 1256
BsmAI	GTCTC	2 cut(s)	70, 971
BsmFI	GGGAC	1 cut(s)	569
BsmI	GAATGC	3 cut(s)	444, 1027, 1201
BsnI	GGCC	2 cut(s)	774, 887
Bsp119I	TTCGAA	1 cut(s)	782
Bsp1286I	GDGCHC	3 cut(s)	232, 970, 1165
Bsp143I	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
Bsp19I	CCATGG	1 cut(s)	1437
BspACI	CCGC	1 cut(s)	884
BspANI	GGCC	2 cut(s)	774, 887
BspCNI	CTCAG	5 cut(s)	403, 847, 993, 1071, 1460
BspDI	ATCGAT	1 cut(s)	259
BspLI	GGNNCC	2 cut(s)	45, 557
BspMAI	CTGCAG	1 cut(s)	1420
BspPI	GGATC	1 cut(s)	1307
BspT104I	TTCGAA	1 cut(s)	782
BspTI	CTTAAG	1 cut(s)	245
BsrDI	GCAATG	1 cut(s)	693
BsrFI	RCCGGY	1 cut(s)	1427
BsrI	ACTGG	4 cut(s)	599, 679, 712, 1279
BssAI	RCCGGY	1 cut(s)	1427
BssECI	CCNNGG	4 cut(s)	655, 769, 1320, 1437
BssMI	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
BssT1I	CCWWGG	3 cut(s)	769, 1320, 1437
Bst2UI	CCWGG	1 cut(s)	656
Bst4CI	ACNGT	5 cut(s)	116, 287, 485, 718, 1457
Bst6I	CTCTTC	1 cut(s)	390
BstAFI	CTTAAG	1 cut(s)	245
BstAPI	GCANNNNNTGC	3 cut(s)	302, 1424, 1490
BstBAI	YACGTR	1 cut(s)	206
BstBI	TTCGAA	1 cut(s)	782
BstC8I	GCNNGC	5 cut(s)	294, 1347, 1416, 1425, 1429
BstDEI	CTNAG	7 cut(s)	66, 411, 834, 1001, 1079, 1166, 1447
BstDSI	CCRYGG	1 cut(s)	1437
BstEII	GGTNACC	1 cut(s)	385
BstENI	CCTNNNNNAGG	2 cut(s)	395, 878
BstF5I	GGATG	3 cut(s)	583, 1073, 1349
BstH2I	RGCGCY	1 cut(s)	411
BstHHI	GCGC	1 cut(s)	410
BstKTI	GATC	6 cut(s)	259, 263, 348, 451, 670, 1315
BstMAI	GTCTC	2 cut(s)	70, 971
BstMBI	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
BstMCI	CGRYCG	3 cut(s)	259, 670, 888
BstMWI	GCNNNNNNNGC	9 cut(s)	182, 302, 314, 1022, 1031, 1196, 1420, 1424, 1490
BstNI	CCWGG	1 cut(s)	656
BstNSI	RCATGY	1 cut(s)	1349
BstPI	GGTNACC	1 cut(s)	385
BstSCI	CCNGG	1 cut(s)	654
BstSFI	CTRYAG	1 cut(s)	1416
BstV1I	GCAGC	7 cut(s)	73, 95, 188, 317, 1046, 1255, 1285
BstV2I	GAAGAC	2 cut(s)	288, 624
BstZI	CGGCCG	1 cut(s)	885
Bsu15I	ATCGAT	1 cut(s)	259
BsuI	GTATCC	2 cut(s)	587, 1253
BsuRI	GGCC	2 cut(s)	774, 887
BsuTUI	ATCGAT	1 cut(s)	259
BtgI	CCRYGG	1 cut(s)	1437
BtsCI	GGATG	3 cut(s)	583, 1073, 1349
BtsI	GCAGTG	2 cut(s)	1425, 1488
BtsIMutI	CAGTG	8 cut(s)	292, 477, 490, 1228, 1272, 1425, 1483, 1488
Cac8I	GCNNGC	5 cut(s)	294, 1347, 1416, 1425, 1429
CaiI	CAGNNNCTG	2 cut(s)	1415, 1424
CfoI	GCGC	1 cut(s)	410
Cfr10I	RCCGGY	1 cut(s)	1427
Cfr13I	GGNCC	3 cut(s)	43, 556, 766
ClaI	ATCGAT	1 cut(s)	259
CseI	GACGC	1 cut(s)	1109
Csp6I	GTAC	3 cut(s)	117, 682, 831
CspCI	CAANNNNNGTGG	6 cut(s)	112, 147, 799, 834, 1305, 1340
CviAII	CATG	4 cut(s)	343, 776, 1346, 1438
CviQI	GTAC	3 cut(s)	117, 682, 831
DdeI	CTNAG	7 cut(s)	66, 411, 834, 1001, 1079, 1166, 1447
DpnI	GATC	6 cut(s)	258, 262, 347, 450, 669, 1314
DpnII	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
EaeI	YGGCCR	1 cut(s)	885
EagI	CGGCCG	1 cut(s)	885
Eam1104I	CTCTTC	1 cut(s)	390
EarI	CTCTTC	1 cut(s)	390
Ecl136II	GAGCTC	2 cut(s)	230, 1163
EclXI	CGGCCG	1 cut(s)	885
Eco130I	CCWWGG	3 cut(s)	769, 1320, 1437
Eco24I	GRGCYC	2 cut(s)	232, 1165
Eco32I	GATATC	1 cut(s)	1150
Eco47I	GGWCC	3 cut(s)	43, 556, 766
Eco47III	AGCGCT	1 cut(s)	409
Eco52I	CGGCCG	1 cut(s)	885
Eco53kI	GAGCTC	2 cut(s)	230, 1163
Eco57I	CTGAAG	2 cut(s)	177, 372
Eco72I	CACGTG	1 cut(s)	206
Eco91I	GGTNACC	1 cut(s)	385
EcoICRI	GAGCTC	2 cut(s)	230, 1163
EcoNI	CCTNNNNNAGG	2 cut(s)	395, 878
EcoO109I	RGGNCCY	3 cut(s)	43, 556, 766
EcoO65I	GGTNACC	1 cut(s)	385
EcoRI	GAATTC	1 cut(s)	1466
EcoRII	CCWGG	1 cut(s)	654
EcoRV	GATATC	1 cut(s)	1150
EcoT14I	CCWWGG	3 cut(s)	769, 1320, 1437
EcoT22I	ATGCAT	1 cut(s)	1351
EcoT38I	GRGCYC	2 cut(s)	232, 1165
ErhI	CCWWGG	3 cut(s)	769, 1320, 1437
FaeI	CATG	4 cut(s)	346, 779, 1349, 1441
FalI	AAGNNNNNCTT	6 cut(s)	621, 653, 777, 809, 1101, 1133
FaqI	GGGAC	1 cut(s)	569
FatI	CATG	4 cut(s)	342, 775, 1345, 1437
Fnu4HI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
FokI	GGATG	3 cut(s)	590, 1080, 1336
FriOI	GRGCYC	2 cut(s)	232, 1165
Fsp4HI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
FspBI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
GlaI	GCGC	1 cut(s)	409
GluI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
GsaI	CCCAGC	1 cut(s)	183
GsuI	CTGGAG	1 cut(s)	729
HaeII	RGCGCY	1 cut(s)	411
HaeIII	GGCC	2 cut(s)	774, 887
HapII	CCGG	1 cut(s)	1428
HgaI	GACGC	1 cut(s)	1109
HhaI	GCGC	1 cut(s)	410
Hin1II	CATG	4 cut(s)	346, 779, 1349, 1441
Hin6I	GCGC	1 cut(s)	408
HinP1I	GCGC	1 cut(s)	408
HincII	GTYRAC	2 cut(s)	847, 1099
HindII	GTYRAC	2 cut(s)	847, 1099
HindIII	AAGCTT	2 cut(s)	354, 911
HinfI	GANTC	2 cut(s)	738, 1305
HpaI	GTTAAC	1 cut(s)	847
HpaII	CCGG	1 cut(s)	1428
HphI	GGTGA	5 cut(s)	122, 397, 456, 833, 1339
Hpy166II	GTNNAC	2 cut(s)	847, 1099
Hpy188I	TCNGA	7 cut(s)	725, 1020, 1061, 1080, 1179, 1251, 1381
Hpy188III	TCNNGA	2 cut(s)	836, 1118
Hpy8I	GTNNAC	2 cut(s)	847, 1099
HpyAV	CCTTC	4 cut(s)	152, 370, 1040, 1222
HpyCH4III	ACNGT	5 cut(s)	116, 287, 485, 718, 1457
HpyCH4IV	ACGT	3 cut(s)	7, 205, 1461
HpyF10VI	GCNNNNNNNGC	9 cut(s)	182, 302, 314, 1022, 1031, 1196, 1420, 1424, 1490
HpyF3I	CTNAG	7 cut(s)	66, 411, 834, 1001, 1079, 1166, 1447
HpySE526I	ACGT	3 cut(s)	7, 205, 1461
Hsp92II	CATG	4 cut(s)	346, 779, 1349, 1441
HspAI	GCGC	1 cut(s)	408
KroI	GCCGGC	1 cut(s)	1427
KroNI	GCCGGC	1 cut(s)	1429
KspAI	GTTAAC	1 cut(s)	847
Kzo9I	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
LmnI	GCTCC	3 cut(s)	62, 965, 1142
Lsp1109I	GCAGC	7 cut(s)	73, 95, 188, 317, 1046, 1255, 1285
LweI	GCATC	5 cut(s)	568, 1003, 1058, 1097, 1358
MaeI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
MaeII	ACGT	3 cut(s)	7, 205, 1461
MaeIII	GTNAC	6 cut(s)	110, 385, 475, 1169, 1241, 1457
MalI	GATC	6 cut(s)	258, 262, 347, 450, 669, 1314
MboI	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
MboII	GAAGA	6 cut(s)	293, 407, 629, 1022, 1142, 1298
MfeI	CAATTG	1 cut(s)	813
MhlI	GDGCHC	3 cut(s)	232, 970, 1165
MluCI	AATT	9 cut(s)	325, 443, 540, 606, 813, 864, 1181, 1466, 1500
MlyI	GAGTC	1 cut(s)	732
MmeI	TCCRAC	6 cut(s)	18, 736, 943, 1039, 1120, 1340
Mph1103I	ATGCAT	1 cut(s)	1351
MroNI	GCCGGC	1 cut(s)	1427
MroXI	GAANNNNTTC	1 cut(s)	1367
MspA1I	CMGCKG	4 cut(s)	86, 179, 308, 1037
MspCI	CTTAAG	1 cut(s)	245
MspI	CCGG	1 cut(s)	1428
MspR9I	CCNGG	1 cut(s)	656
MunI	CAATTG	1 cut(s)	813
Mva1269I	GAATGC	3 cut(s)	444, 1027, 1201
MvaI	CCWGG	1 cut(s)	656
MwoI	GCNNNNNNNGC	9 cut(s)	182, 302, 314, 1022, 1031, 1196, 1420, 1424, 1490
NaeI	GCCGGC	1 cut(s)	1429
NcoI	CCATGG	1 cut(s)	1437
NdeII	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
NgoMIV	GCCGGC	1 cut(s)	1427
NlaIII	CATG	4 cut(s)	346, 779, 1349, 1441
NlaIV	GGNNCC	2 cut(s)	45, 557
NmeAIII	GCCGAG	1 cut(s)	913
NmuCI	GTSAC	4 cut(s)	110, 385, 475, 1241
NsiI	ATGCAT	1 cut(s)	1351
NspI	RCATGY	1 cut(s)	1349
NspV	TTCGAA	1 cut(s)	782
PaeI	GCATGC	1 cut(s)	1349
PctI	GAATGC	3 cut(s)	444, 1027, 1201
PdiI	GCCGGC	1 cut(s)	1429
PdmI	GAANNNNTTC	1 cut(s)	1367
PfeI	GAWTC	1 cut(s)	1305
PkrI	GCNGC	8 cut(s)	85, 88, 178, 307, 886, 1036, 1270, 1300
Ple19I	CGATCG	2 cut(s)	259, 670
PleI	GAGTC	1 cut(s)	732
PmaCI	CACGTG	1 cut(s)	206
PmlI	CACGTG	1 cut(s)	206
PpsI	GAGTC	1 cut(s)	732
Ppu21I	YACGTR	1 cut(s)	206
PpuMI	RGGWCCY	3 cut(s)	43, 556, 766
PshBI	ATTAAT	1 cut(s)	1184
Psp124BI	GAGCTC	2 cut(s)	232, 1165
Psp5II	RGGWCCY	3 cut(s)	43, 556, 766
Psp6I	CCWGG	1 cut(s)	654
PspCI	CACGTG	1 cut(s)	206
PspEI	GGTNACC	1 cut(s)	385
PspFI	CCCAGC	1 cut(s)	179
PspGI	CCWGG	1 cut(s)	654
PspN4I	GGNNCC	2 cut(s)	45, 557
PspPI	GGNCC	3 cut(s)	43, 556, 766
PspPPI	RGGWCCY	3 cut(s)	43, 556, 766
PstI	CTGCAG	1 cut(s)	1420
PstNI	CAGNNNCTG	2 cut(s)	1415, 1424
PvuI	CGATCG	2 cut(s)	259, 670
PvuII	CAGCTG	4 cut(s)	86, 179, 308, 1037
RsaI	GTAC	3 cut(s)	118, 683, 832
RsaNI	GTAC	3 cut(s)	117, 682, 831
SacI	GAGCTC	2 cut(s)	232, 1165
SatI	GCNGC	8 cut(s)	84, 87, 177, 306, 885, 1035, 1269, 1299
Sau3AI	GATC	6 cut(s)	256, 260, 345, 448, 667, 1312
Sau96I	GGNCC	3 cut(s)	43, 556, 766
ScaI	AGTACT	1 cut(s)	832
SchI	GAGTC	1 cut(s)	732
ScrFI	CCNGG	1 cut(s)	656
SduI	GDGCHC	3 cut(s)	232, 970, 1165
SfaNI	GCATC	5 cut(s)	568, 1003, 1058, 1097, 1358
SfcI	CTRYAG	1 cut(s)	1416
SfuI	TTCGAA	1 cut(s)	782
SinI	GGWCC	3 cut(s)	43, 556, 766
SmlI	CTYRAG	1 cut(s)	245
SmoI	CTYRAG	1 cut(s)	245
SphI	GCATGC	1 cut(s)	1349
Sse9I	AATT	9 cut(s)	325, 443, 540, 606, 813, 864, 1181, 1466, 1500
SsiI	CCGC	1 cut(s)	884
SspI	AATATT	1 cut(s)	58
SspMI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
SstI	GAGCTC	2 cut(s)	232, 1165
StyD4I	CCNGG	1 cut(s)	654
StyI	CCWWGG	3 cut(s)	769, 1320, 1437
TaaI	ACNGT	5 cut(s)	116, 287, 485, 718, 1457
TaiI	ACGT	3 cut(s)	10, 208, 1464
TaqI	TCGA	3 cut(s)	259, 666, 782
TasI	AATT	9 cut(s)	325, 443, 540, 606, 813, 864, 1181, 1466, 1500
TatI	WGTACW	1 cut(s)	830
TauI	GCSGC	1 cut(s)	887
TfiI	GAWTC	1 cut(s)	1305
TscAI	CASTG	8 cut(s)	292, 484, 490, 1228, 1279, 1425, 1483, 1495
TseFI	GTSAC	4 cut(s)	110, 385, 475, 1241
TseI	GCWGC	7 cut(s)	83, 86, 176, 305, 1034, 1268, 1298
Tsp45I	GTSAC	4 cut(s)	110, 385, 475, 1241
TspDTI	ATGAA	6 cut(s)	17, 345, 915, 933, 1143, 1299
TspRI	CASTG	8 cut(s)	292, 484, 490, 1228, 1279, 1425, 1483, 1495
Vha464I	CTTAAG	1 cut(s)	245
VpaK11BI	GGWCC	3 cut(s)	43, 556, 766
VspI	ATTAAT	1 cut(s)	1184
XagI	CCTNNNNNAGG	2 cut(s)	395, 878
XapI	RAATTY	1 cut(s)	1466
XceI	RCATGY	1 cut(s)	1349
XmaJI	CCTAGG	1 cut(s)	769
XmnI	GAANNNNTTC	1 cut(s)	1367
XspI	CTAG	5 cut(s)	104, 233, 275, 770, 1340
ZrmI	AGTACT	1 cut(s)	832
Zsp2I	ATGCAT	1 cut(s)	1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.