pycom03g14810

Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
16148755 .. 16150421
1667 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g14810.2

Sequence Viewer

Length: 1284 bp
ATGATGGCGAAGGACTCAAAAACTGGGGTGGTTGGTTCAACAATTTCAATGATTTTCTTGCTTACAATTGGTTTGCTTTATGCTGCGTTCACCCCCAATATTAATCCCTTTCAAACATGGGTAGATCGAATTCAACTCGAAACCACCGGGTTTTCTTGCCACTCCGACGTTCACTCGGAAGTGTGCGTGGCTAATAGACCAGTTATAGTTGACAAGAATGCTTTAACAGTTTATGTACCTTCAAATGAAGCCCAAGTTGAATACAAGGTTCAGCCATATGCAAGGAAAGAGGATGGGACTGCAATGAAGGCTGTCACACCAGTGCAAATACTACATGGAAACATTAGTACTCCTCCGGCTTGCAATTTTTCTTACAACATCCCAGCTATGATATTCTCTTCTGGTGGCTTCACCGGAAACCTATTTCACGAATTCAATGAGATCATCATCCCCTTGTTCATCATGTCACGCCGCTTTCGATCCCAGCTTCAGTTTGTCATAACTGATTTTAAGCCATGGTGGGTTAGCAAGTACGAACGAATTCTATCATCGTTGTCCAGTTATGATGTGATAAATTCGGTTGAGAATGGAAGTGCTCACTGCTATCCTGGAGCTGTCATAGGCCTTAAGTTTCATGACAACTTAGCGCTAAATTCTTCCGACATTCCAGGAGGGTACTCCATGTTTGACTTCAAGCAGTTCCTAAGAGAATCATACATGCTGAAAATGAAGGATGTCTCAAATCAGATGGGGGAAAAACCAGTGCTAGTTCTTATATCTCGTCGCAAAACAAGGAAGTTTTTGAATGAAGATAAGATGGTGGAAATGATGGAAGAATTAGGCTTTCAGGTTATCGCTGCAACGCCTAACCAGACATCTAATTTGGACACATTTTCGGGCTTAGTGAACTCTTGTAGCGTCATGGTTGGGGCTCACGGTGCTGGCCTTACAAATGCACTGTTCTTGCCAGCTGGGGCAGTGTTGGTGCAAGTGGTACCGCTGGGCCTAGATTGGCCATCAGCTAACTATTATGGTGGACCGGCGAGTGAAATGGGGCTAAATTACTTGGAATACAAGATTAAACCAGAGGAGAGTTCACTGATTGATGACTATGGTCCAGATCACCCGGTCATCACGGATCCCATGTCTATTTCCTTGAAGGGCTATCGGGCTTCTAGGGCTGTGTACATTGATGGACAAAATCTGAAGGTTAACATGGTGAGGTTCCGAGAAACCCTCGCTGAAGCTCTAAAACTTGTTGGAGGCTCCACTCCTTCAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

428

Amino Acids

47.25

Weight (kDa)

6.09

Isoelectric Point (pI)

34.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0014695)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 994
AccB1I GGYRCC 1 cut(s) 994
AciI CCGC 2 cut(s) 472, 998
AclWI GGATC 3 cut(s) 474, 1133, 1146
AcoI YGGCCR 1 cut(s) 1013
AcsI RAATTY 5 cut(s) 129, 431, 540, 574, 652
AcuI CTGAAG 3 cut(s) 473, 1226, 1263
AfaI GTAC 6 cut(s) 237, 349, 533, 677, 996, 1187
AfeI AGCGCT 1 cut(s) 648
AflII CTTAAG 1 cut(s) 626
AjnI CCWGG 2 cut(s) 607, 667
AleI CACNNNNGTG 1 cut(s) 320
AluBI AGCT 6 cut(s) 386, 487, 614, 971, 1022, 1247
AluI AGCT 6 cut(s) 386, 487, 614, 971, 1022, 1247
Alw21I GWGCWC 1 cut(s) 598
Alw26I GTCTC 1 cut(s) 742
AlwI GGATC 3 cut(s) 474, 1133, 1146
Aor51HI AGCGCT 1 cut(s) 648
AoxI GGCC 4 cut(s) 622, 943, 1003, 1013
ApeKI GCWGC 2 cut(s) 83, 857
ApoI RAATTY 5 cut(s) 129, 431, 540, 574, 652
ArsI GACNNNNNNTTYG 2 cut(s) 865, 897
AseI ATTAAT 1 cut(s) 102
Asp700I GAANNNNTTC 1 cut(s) 540
Asp718I GGTACC 1 cut(s) 994
AspLEI GCGC 1 cut(s) 649
AspS9I GGNCC 3 cut(s) 1003, 1037, 1115
AsuC2I CCSGG 2 cut(s) 148, 1127
AsuHPI GGTGA 4 cut(s) 82, 403, 1115, 1231
AvaII GGWCC 2 cut(s) 1037, 1115
BalI TGGCCA 1 cut(s) 1015
BamHI GGATCC 1 cut(s) 1138
BanI GGYRCC 1 cut(s) 994
BanII GRGCYC 1 cut(s) 934
Bbv12I GWGCWC 1 cut(s) 598
BbvI GCAGC 2 cut(s) 70, 844
BccI CCATC 6 cut(s) 287, 742, 811, 823, 1024, 1187
BciT130I CCWGG 2 cut(s) 609, 669
BcnI CCSGG 2 cut(s) 148, 1127
BcoDI GTCTC 1 cut(s) 742
BfaI CTAG 3 cut(s) 767, 1007, 1176
BfoI RGCGCY 1 cut(s) 650
BfrI CTTAAG 1 cut(s) 626
BisI GCNGC 3 cut(s) 84, 472, 858
BlsI GCNGC 3 cut(s) 85, 473, 859
BmcAI AGTACT 1 cut(s) 349
Bme1390I CCNGG 4 cut(s) 148, 609, 669, 1127
Bme18I GGWCC 2 cut(s) 1037, 1115
BmgT120I GGNCC 3 cut(s) 1003, 1037, 1115
BmiI GGNNCC 4 cut(s) 996, 1140, 1226, 1267
BmrFI CCNGG 4 cut(s) 148, 609, 669, 1127
BmrI ACTGGG 1 cut(s) 33
BmuI ACTGGG 1 cut(s) 33
BoxI GACNNNNGTC 1 cut(s) 1113
BplI GAGNNNNNCTC 2 cut(s) 1221, 1253
BpmI CTGGAG 1 cut(s) 630
BpuMI CCSGG 2 cut(s) 148, 1127
BsaBI GATNNNNATC 1 cut(s) 446
BsaJI CCNNGG 1 cut(s) 515
BsaWI WCCGGW 1 cut(s) 413
Bse118I RCCGGY 1 cut(s) 1039
Bse1I ACTGG 5 cut(s) 28, 200, 320, 558, 761
Bse3DI GCAATG 1 cut(s) 309
Bse8I GATNNNNATC 1 cut(s) 446
BseBI CCWGG 2 cut(s) 609, 669
BseDI CCNNGG 1 cut(s) 515
BseGI GGATG 4 cut(s) 298, 378, 447, 739
BseJI GATNNNNATC 1 cut(s) 446
BseMI GCAATG 1 cut(s) 309
BseNI ACTGG 5 cut(s) 28, 200, 320, 558, 761
BseRI GAGGAG 2 cut(s) 342, 1103
BseXI GCAGC 2 cut(s) 70, 844
BseYI CCCAGC 4 cut(s) 382, 483, 971, 1000
BshFI GGCC 4 cut(s) 624, 945, 1005, 1015
BshNI GGYRCC 1 cut(s) 994
BsiHKAI GWGCWC 1 cut(s) 598
BsiSI CCGG 5 cut(s) 147, 356, 414, 1040, 1127
BslFI GGGAC 1 cut(s) 310
BsmAI GTCTC 1 cut(s) 742
BsmFI GGGAC 1 cut(s) 310
BsmI GAATGC 1 cut(s) 223
BsnI GGCC 4 cut(s) 624, 945, 1005, 1015
Bsp1286I GDGCHC 2 cut(s) 598, 934
Bsp1407I TGTACA 1 cut(s) 1185
Bsp143I GATC 5 cut(s) 124, 441, 479, 1120, 1138
Bsp19I CCATGG 1 cut(s) 515
BspACI CCGC 2 cut(s) 472, 998
BspANI GGCC 4 cut(s) 624, 945, 1005, 1015
BspHI TCATGA 1 cut(s) 634
BspLI GGNNCC 4 cut(s) 996, 1140, 1226, 1267
BspPI GGATC 3 cut(s) 474, 1133, 1146
BspT107I GGYRCC 1 cut(s) 994
BspTI CTTAAG 1 cut(s) 626
BsrDI GCAATG 1 cut(s) 309
BsrFI RCCGGY 1 cut(s) 1039
BsrGI TGTACA 1 cut(s) 1185
BsrI ACTGG 5 cut(s) 28, 200, 320, 558, 761
BssAI RCCGGY 1 cut(s) 1039
BssECI CCNNGG 1 cut(s) 515
BssMI GATC 5 cut(s) 124, 441, 479, 1120, 1138
BssT1I CCWWGG 1 cut(s) 515
Bst2UI CCWGG 2 cut(s) 609, 669
Bst4CI ACNGT 3 cut(s) 229, 938, 960
Bst6I CTCTTC 1 cut(s) 403
BstAFI CTTAAG 1 cut(s) 626
BstAUI TGTACA 1 cut(s) 1185
BstC8I GCNNGC 3 cut(s) 361, 943, 969
BstDEI CTNAG 3 cut(s) 643, 704, 901
BstDSI CCRYGG 1 cut(s) 515
BstF5I GGATG 4 cut(s) 298, 378, 447, 739
BstH2I RGCGCY 1 cut(s) 650
BstHHI GCGC 1 cut(s) 649
BstKTI GATC 5 cut(s) 127, 444, 482, 1123, 1141
BstMAI GTCTC 1 cut(s) 742
BstMBI GATC 5 cut(s) 124, 441, 479, 1120, 1138
BstMWI GCNNNNNNNGC 3 cut(s) 308, 938, 1178
BstNI CCWGG 2 cut(s) 609, 669
BstNSI RCATGY 1 cut(s) 721
BstPAI GACNNNNGTC 1 cut(s) 1113
BstSCI CCNGG 4 cut(s) 146, 607, 667, 1125
BstV1I GCAGC 2 cut(s) 70, 844
BstX2I RGATCY 1 cut(s) 1138
BstYI RGATCY 1 cut(s) 1138
BsuRI GGCC 4 cut(s) 624, 945, 1005, 1015
BtgI CCRYGG 1 cut(s) 515
BtsCI GGATG 4 cut(s) 298, 378, 447, 739
BtsI GCAGTG 2 cut(s) 598, 984
BtsIMutI CAGTG 6 cut(s) 327, 598, 768, 956, 984, 1097
Cac8I GCNNGC 3 cut(s) 361, 943, 969
CciI TCATGA 1 cut(s) 634
CfoI GCGC 1 cut(s) 649
Cfr10I RCCGGY 1 cut(s) 1039
Cfr13I GGNCC 3 cut(s) 1003, 1037, 1115
CseI GACGC 1 cut(s) 907
Csp6I GTAC 6 cut(s) 236, 348, 532, 676, 995, 1186
CviQI GTAC 6 cut(s) 236, 348, 532, 676, 995, 1186
DdeI CTNAG 3 cut(s) 643, 704, 901
DpnI GATC 5 cut(s) 126, 443, 481, 1122, 1140
DpnII GATC 5 cut(s) 124, 441, 479, 1120, 1138
EaeI YGGCCR 1 cut(s) 1013
Eam1104I CTCTTC 1 cut(s) 403
EarI CTCTTC 1 cut(s) 403
Eco130I CCWWGG 1 cut(s) 515
Eco147I AGGCCT 1 cut(s) 624
Eco24I GRGCYC 1 cut(s) 934
Eco47I GGWCC 2 cut(s) 1037, 1115
Eco47III AGCGCT 1 cut(s) 648
Eco57I CTGAAG 3 cut(s) 473, 1226, 1263
EcoRI GAATTC 3 cut(s) 129, 431, 540
EcoRII CCWGG 2 cut(s) 607, 667
EcoT14I CCWWGG 1 cut(s) 515
EcoT38I GRGCYC 1 cut(s) 934
ErhI CCWWGG 1 cut(s) 515
FaqI GGGAC 1 cut(s) 310
FauNDI CATATG 1 cut(s) 277
Fnu4HI GCNGC 3 cut(s) 84, 472, 858
FokI GGATG 4 cut(s) 305, 365, 434, 746
FriOI GRGCYC 1 cut(s) 934
Fsp4HI GCNGC 3 cut(s) 84, 472, 858
FspBI CTAG 3 cut(s) 767, 1007, 1176
GlaI GCGC 1 cut(s) 648
GluI GCNGC 3 cut(s) 84, 472, 858
GsaI CCCAGC 4 cut(s) 386, 487, 975, 1004
GsuI CTGGAG 1 cut(s) 630
HaeII RGCGCY 1 cut(s) 650
HaeIII GGCC 4 cut(s) 624, 945, 1005, 1015
HapII CCGG 5 cut(s) 147, 356, 414, 1040, 1127
HgaI GACGC 1 cut(s) 907
HhaI GCGC 1 cut(s) 649
Hin6I GCGC 1 cut(s) 647
HinP1I GCGC 1 cut(s) 647
HincII GTYRAC 2 cut(s) 211, 1213
HindII GTYRAC 2 cut(s) 211, 1213
HinfI GANTC 2 cut(s) 14, 710
HpaI GTTAAC 1 cut(s) 1213
HpaII CCGG 5 cut(s) 147, 356, 414, 1040, 1127
HphI GGTGA 4 cut(s) 82, 403, 1115, 1231
Hpy166II GTNNAC 8 cut(s) 90, 172, 211, 907, 1037, 1097, 1186, 1213
Hpy188I TCNGA 6 cut(s) 166, 178, 661, 747, 1206, 1229
Hpy188III TCNNGA 3 cut(s) 428, 635, 1118
Hpy8I GTNNAC 8 cut(s) 90, 172, 211, 907, 1037, 1097, 1186, 1213
Hpy99I CGWCG 2 cut(s) 170, 786
HpyAV CCTTC 7 cut(s) 4, 249, 301, 724, 1153, 1201, 1284
HpyCH4III ACNGT 3 cut(s) 229, 938, 960
HpyCH4IV ACGT 1 cut(s) 168
HpyCH4V TGCA 7 cut(s) 281, 302, 325, 363, 860, 956, 988
HpyF10VI GCNNNNNNNGC 3 cut(s) 308, 938, 1178
HpyF3I CTNAG 3 cut(s) 643, 704, 901
HpySE526I ACGT 1 cut(s) 168
HspAI GCGC 1 cut(s) 647
KpnI GGTACC 1 cut(s) 998
KspAI GTTAAC 1 cut(s) 1213
Kzo9I GATC 5 cut(s) 124, 441, 479, 1120, 1138
LmnI GCTCC 2 cut(s) 611, 1271
Lsp1109I GCAGC 2 cut(s) 70, 844
MaeI CTAG 3 cut(s) 767, 1007, 1176
MaeII ACGT 1 cut(s) 168
MaeIII GTNAC 2 cut(s) 313, 465
MalI GATC 5 cut(s) 126, 443, 481, 1122, 1140
MboI GATC 5 cut(s) 124, 441, 479, 1120, 1138
MboII GAAGA 4 cut(s) 390, 648, 821, 845
MfeI CAATTG 1 cut(s) 66
MflI RGATCY 1 cut(s) 1138
MhlI GDGCHC 2 cut(s) 598, 934
MlsI TGGCCA 1 cut(s) 1015
MluNI TGGCCA 1 cut(s) 1015
MlyI GAGTC 1 cut(s) 8
MmeI TCCRAC 3 cut(s) 189, 684, 1240
MnlI CCTC 7 cut(s) 283, 363, 665, 1081, 1215, 1247, 1256
Mox20I TGGCCA 1 cut(s) 1015
MroXI GAANNNNTTC 1 cut(s) 540
MscI TGGCCA 1 cut(s) 1015
MseI TTAA 7 cut(s) 102, 224, 510, 627, 1080, 1212, 1282
MslI CAYNNNNRTG 1 cut(s) 320
Msp20I TGGCCA 1 cut(s) 1015
MspA1I CMGCKG 2 cut(s) 971, 1000
MspCI CTTAAG 1 cut(s) 626
MspI CCGG 5 cut(s) 147, 356, 414, 1040, 1127
MspR9I CCNGG 4 cut(s) 148, 609, 669, 1127
MunI CAATTG 1 cut(s) 66
Mva1269I GAATGC 1 cut(s) 223
MvaI CCWGG 2 cut(s) 609, 669
MwoI GCNNNNNNNGC 3 cut(s) 308, 938, 1178
NciI CCSGG 2 cut(s) 148, 1127
NcoI CCATGG 1 cut(s) 515
NdeI CATATG 1 cut(s) 277
NdeII GATC 5 cut(s) 124, 441, 479, 1120, 1138
NlaIV GGNNCC 4 cut(s) 996, 1140, 1226, 1267
NmuCI GTSAC 2 cut(s) 313, 465
NspI RCATGY 1 cut(s) 721
OliI CACNNNNGTG 1 cut(s) 320
PagI TCATGA 1 cut(s) 634
PceI AGGCCT 1 cut(s) 624
PcsI WCGNNNNNNNCGW 1 cut(s) 475
PctI GAATGC 1 cut(s) 223
PdmI GAANNNNTTC 1 cut(s) 540
PfeI GAWTC 1 cut(s) 710
PfoI TCCNGGA 2 cut(s) 607, 667
PkrI GCNGC 3 cut(s) 85, 473, 859
PleI GAGTC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 8
PshAI GACNNNNGTC 1 cut(s) 1113
PshBI ATTAAT 1 cut(s) 102
Psp6I CCWGG 2 cut(s) 607, 667
PspFI CCCAGC 4 cut(s) 382, 483, 971, 1000
PspGI CCWGG 2 cut(s) 607, 667
PspN4I GGNNCC 4 cut(s) 996, 1140, 1226, 1267
PspPI GGNCC 3 cut(s) 1003, 1037, 1115
PsuI RGATCY 1 cut(s) 1138
PvuII CAGCTG 1 cut(s) 971
RsaI GTAC 6 cut(s) 237, 349, 533, 677, 996, 1187
RsaNI GTAC 6 cut(s) 236, 348, 532, 676, 995, 1186
RseI CAYNNNNRTG 1 cut(s) 320
SaqAI TTAA 7 cut(s) 102, 224, 510, 627, 1080, 1212, 1282
SatI GCNGC 3 cut(s) 84, 472, 858
Sau3AI GATC 5 cut(s) 124, 441, 479, 1120, 1138
Sau96I GGNCC 3 cut(s) 1003, 1037, 1115
ScaI AGTACT 1 cut(s) 349
SchI GAGTC 1 cut(s) 8
ScrFI CCNGG 4 cut(s) 148, 609, 669, 1127
SduI GDGCHC 2 cut(s) 598, 934
SinI GGWCC 2 cut(s) 1037, 1115
SmiMI CAYNNNNRTG 1 cut(s) 320
SmlI CTYRAG 1 cut(s) 626
SmoI CTYRAG 1 cut(s) 626
SseBI AGGCCT 1 cut(s) 624
SsiI CCGC 2 cut(s) 472, 998
SspI AATATT 1 cut(s) 100
SspMI CTAG 3 cut(s) 767, 1007, 1176
StuI AGGCCT 1 cut(s) 624
StyD4I CCNGG 4 cut(s) 146, 607, 667, 1125
StyI CCWWGG 1 cut(s) 515
TaaI ACNGT 3 cut(s) 229, 938, 960
TaiI ACGT 1 cut(s) 171
TaqI TCGA 3 cut(s) 127, 138, 478
TatI WGTACW 2 cut(s) 347, 1185
TauI GCSGC 1 cut(s) 474
TfiI GAWTC 1 cut(s) 710
Tru1I TTAA 7 cut(s) 102, 224, 510, 627, 1080, 1212, 1282
Tru9I TTAA 7 cut(s) 102, 224, 510, 627, 1080, 1212, 1282
TscAI CASTG 6 cut(s) 327, 605, 768, 963, 984, 1104
TseFI GTSAC 2 cut(s) 313, 465
TseI GCWGC 2 cut(s) 83, 857
Tsp45I GTSAC 2 cut(s) 313, 465
TspDTI ATGAA 6 cut(s) 261, 320, 448, 623, 743, 822
TspGWI ACGGA 1 cut(s) 1151
TspRI CASTG 6 cut(s) 327, 605, 768, 963, 984, 1104
Vha464I CTTAAG 1 cut(s) 626
VpaK11BI GGWCC 2 cut(s) 1037, 1115
VspI ATTAAT 1 cut(s) 102
XapI RAATTY 5 cut(s) 129, 431, 540, 574, 652
XceI RCATGY 1 cut(s) 721
XmnI GAANNNNTTC 1 cut(s) 540
XspI CTAG 3 cut(s) 767, 1007, 1176
ZrmI AGTACT 1 cut(s) 349
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.