Rorug05G0189200

Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
18396577 .. 18397040
464 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0189200.1

Sequence Viewer

Length: 333 bp
ATGGCAAAGAGCAAGGATGACATAAAGTATGCGACTTCACAAGCGAGGCTTAGTGAAGATGAAGCAGTGAGAGTTGCTTACGAGCATGGAACACCTCTTGAAGGTGGAAAGATAGCCCAGTCTGAGCGTGTTGATCTATTTCCGGCTGCTCATAACATTTCCAAGAGCACCGAGTCTCATAGTCATGATGATCCAAATCGACAACCACAAGATTCTAGCAATCAGTCCCAGATGCGACGTGAGCCTGCTGATAATATACAAGTTGGTCATGAATCTAACACCAATAGTGCTAGGTTTCCCAAGAAGACTGCACCTTCTCTAAATACCAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

110

Amino Acids

12.17

Weight (kDa)

6.51

Isoelectric Point (pI)

60.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0014695)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 185
AfiI CCNNNNNNNGG 1 cut(s) 101
AgsI TTSAA 1 cut(s) 101
AjiI CACGTC 1 cut(s) 239
Alw21I GWGCWC 1 cut(s) 170
Alw26I GTCTC 1 cut(s) 180
AlwI GGATC 1 cut(s) 185
ApeKI GCWGC 1 cut(s) 146
BbsI GAAGAC 1 cut(s) 311
Bbv12I GWGCWC 1 cut(s) 170
BbvI GCAGC 1 cut(s) 133
BcoDI GTCTC 1 cut(s) 180
BfaI CTAG 2 cut(s) 216, 291
BisI GCNGC 1 cut(s) 147
BlsI GCNGC 1 cut(s) 148
BmgBI CACGTC 1 cut(s) 239
BmrI ACTGGG 1 cut(s) 112
BmsI GCATC 1 cut(s) 222
BmuI ACTGGG 1 cut(s) 112
BpiI GAAGAC 1 cut(s) 311
BsaBI GATNNNNATC 1 cut(s) 195
Bsc4I CCNNNNNNNGG 1 cut(s) 101
Bse1I ACTGG 1 cut(s) 118
Bse8I GATNNNNATC 1 cut(s) 195
BseGI GGATG 1 cut(s) 22
BseJI GATNNNNATC 1 cut(s) 195
BseLI CCNNNNNNNGG 1 cut(s) 101
BseMII CTCAG 1 cut(s) 114
BseNI ACTGG 1 cut(s) 118
BseXI GCAGC 1 cut(s) 133
BsgI GTGCAG 1 cut(s) 294
BsiHKAI GWGCWC 1 cut(s) 170
BsiSI CCGG 1 cut(s) 143
BslFI GGGAC 1 cut(s) 211
BslI CCNNNNNNNGG 1 cut(s) 101
BsmAI GTCTC 1 cut(s) 180
BsmFI GGGAC 1 cut(s) 211
Bsp1286I GDGCHC 1 cut(s) 170
Bsp143I GATC 2 cut(s) 133, 190
BspCNI CTCAG 1 cut(s) 115
BspHI TCATGA 2 cut(s) 184, 268
BspPI GGATC 1 cut(s) 185
BsrI ACTGG 1 cut(s) 118
BssMI GATC 2 cut(s) 133, 190
BstC8I GCNNGC 1 cut(s) 246
BstDEI CTNAG 2 cut(s) 50, 123
BstENI CCTNNNNNAGG 1 cut(s) 99
BstF5I GGATG 1 cut(s) 22
BstKTI GATC 2 cut(s) 136, 193
BstMAI GTCTC 1 cut(s) 180
BstMBI GATC 2 cut(s) 133, 190
BstMWI GCNNNNNNNGC 1 cut(s) 241
BstV1I GCAGC 1 cut(s) 133
BstV2I GAAGAC 1 cut(s) 311
BtrI CACGTC 1 cut(s) 239
BtsCI GGATG 1 cut(s) 22
BtsI GCAGTG 1 cut(s) 72
BtsIMutI CAGTG 1 cut(s) 72
Cac8I GCNNGC 1 cut(s) 246
CciI TCATGA 2 cut(s) 184, 268
CviAII CATG 3 cut(s) 86, 185, 269
CviJI RGCY 4 cut(s) 49, 116, 146, 244
CviKI_1 RGCY 4 cut(s) 49, 116, 146, 244
DdeI CTNAG 2 cut(s) 50, 123
DpnI GATC 2 cut(s) 135, 192
DpnII GATC 2 cut(s) 133, 190
EcoNI CCTNNNNNAGG 1 cut(s) 99
FaeI CATG 3 cut(s) 89, 188, 272
FaiI YATR 8 cut(s) 23, 30, 87, 153, 180, 186, 257, 270
FalI AAGNNNNNCTT 2 cut(s) 33, 65
FaqI GGGAC 1 cut(s) 211
FatI CATG 3 cut(s) 85, 184, 268
Fnu4HI GCNGC 1 cut(s) 147
FokI GGATG 1 cut(s) 29
Fsp4HI GCNGC 1 cut(s) 147
FspBI CTAG 2 cut(s) 216, 291
GluI GCNGC 1 cut(s) 147
HapII CCGG 1 cut(s) 143
Hin1II CATG 3 cut(s) 89, 188, 272
HinfI GANTC 3 cut(s) 173, 212, 272
HpaII CCGG 1 cut(s) 143
Hpy188I TCNGA 1 cut(s) 124
Hpy188III TCNNGA 3 cut(s) 98, 185, 269
Hpy99I CGWCG 1 cut(s) 240
HpyAV CCTTC 2 cut(s) 95, 324
HpyCH4IV ACGT 1 cut(s) 238
HpyCH4V TGCA 1 cut(s) 311
HpyF10VI GCNNNNNNNGC 1 cut(s) 241
HpyF3I CTNAG 2 cut(s) 50, 123
HpySE526I ACGT 1 cut(s) 238
Hsp92II CATG 3 cut(s) 89, 188, 272
Kzo9I GATC 2 cut(s) 133, 190
LpnPI CCDG 4 cut(s) 131, 156, 242, 258
Lsp1109I GCAGC 1 cut(s) 133
LweI GCATC 1 cut(s) 222
MaeI CTAG 2 cut(s) 216, 291
MaeII ACGT 1 cut(s) 238
MalI GATC 2 cut(s) 135, 192
MboI GATC 2 cut(s) 133, 190
MboII GAAGA 2 cut(s) 68, 316
MhlI GDGCHC 1 cut(s) 170
MlyI GAGTC 1 cut(s) 182
MnlI CCTC 2 cut(s) 39, 105
MslI CAYNNNNRTG 1 cut(s) 183
MspI CCGG 1 cut(s) 143
MwoI GCNNNNNNNGC 1 cut(s) 241
NdeII GATC 2 cut(s) 133, 190
NlaIII CATG 3 cut(s) 89, 188, 272
PagI TCATGA 2 cut(s) 184, 268
PfeI GAWTC 2 cut(s) 212, 272
PkrI GCNGC 1 cut(s) 148
PleI GAGTC 1 cut(s) 181
PpsI GAGTC 1 cut(s) 181
RseI CAYNNNNRTG 1 cut(s) 183
SatI GCNGC 1 cut(s) 147
Sau3AI GATC 2 cut(s) 133, 190
SchI GAGTC 1 cut(s) 182
SduI GDGCHC 1 cut(s) 170
SetI ASST 5 cut(s) 97, 106, 241, 296, 316
SfaNI GCATC 1 cut(s) 222
SmiMI CAYNNNNRTG 1 cut(s) 183
SspMI CTAG 2 cut(s) 216, 291
TaiI ACGT 1 cut(s) 241
TaqI TCGA 1 cut(s) 199
TfiI GAWTC 2 cut(s) 212, 272
TscAI CASTG 1 cut(s) 72
TseI GCWGC 1 cut(s) 146
TspDTI ATGAA 2 cut(s) 75, 285
TspRI CASTG 1 cut(s) 72
XagI CCTNNNNNAGG 1 cut(s) 99
XspI CTAG 2 cut(s) 216, 291
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.