pycom04g01830

Ubiquitin associated domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0009633
Physical Location & Seq
Reverse (-)
1667115 .. 1668871
1757 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1707 bp
ATGAAACAGATGACCATTCTGGGGGCTCGGTTGCTACCGGAGTGGAGTATGATTCTGTTTCCAATAACGGTAGCTGGTCAGGAAGCAGTGCCAGGAGCTGACAATGACAAGCGAGAGAAAATCCGTCAGAAGAATGAGAGGAAGCATCAGCGACAGAAAGAGCGGCGAGCTCAGGAGTTGCATGAACGATGCAGTGGTTATCTCATGTCAAGAAAGCTTGAGGCACTTGCTCAACAGCTTGTGGCAATGGGGTTTTCACAAGAACGGGCAACCATGGCTCTCATACTGAATGAAGGCAGAGTAGAGGAATCAGTAGCATGGCTTTTTGAGGGTGGTGAAGATACAGATAAGCCAAGGGATCAAAACTTTGGTGGGGATAATTTGAAAATTGACATATCAGAAGAACTTGAGCGGATTGCTGATTTGGTAACACGGTTCAATTGCTCAAAGCAGGAGGTTGAAAGAGCTATTGTAGCCTGTGAGGGTGATCTTCAGAAGGCTGCTGAAAGCTTAAGAGCATCAAAGCAAGAATCACCCTCTGTATCAACTAAGCCTGAAGAAACTGGTGATCCTCCATCTGGTACTAATGGCAAGCTTCCTGTTGCTGTTAGCCATAACTTGAGGCCACAAACAAAACCTAATCCTCCTCCAACTATACAACAAAGAAGGGATGACAAGGACTTTAATTACACAAAACAAGCAGCTGCAGTTGGAGGGTCTTTAGAATCTGCAAGCAAAACTCTGCAGCCTCTGAAGAGAGGACAGCCAAAGTTGGAGTGGGCGAAACCCCAACCGACACCAGTTCTGGCTGAGAGAAGGTTGACAAATTCGGGATCGAATCCTTCAGTTTCCTATTCTTTGGCATCACCTTTGCAGGTCTTAACTCCACCAGTCAAGACAGAAACTCGTTATGTAGCTGTAGGGGGTGAGTTGAAGAACCTTCAGCCTGGAACAGTAAGGGAACCGGTTATAATGATGCAGCGCCCTCAATCTGTCAATATAAAGCAGGTCCCTGCCACCAGTATGAGCTCATCACCTCCTGGATCCGCTGCCAATTGGTATCCTTCTACTAATGTCGAGATTATGAGGGCCGGTGGTTATGTGCCCCACATGCCTAGCAATAGAAGCCCAAGCCCTAGTAATTTGAGTTCAAATCAGATGTACCACCAGTTTCAGTATCAACAGCAACAGCAGCAGCATTTTGTTCCTGGAAGCAGCCCAGCTGAATCCCCTGGAACAAGCCGAGGGAATAATCTATGGAGTAGGGCAGGTGCATCTCCGACACTTGCTGCCGCTTCCTCCCTTGGACTTTTCTCAGGGTTGGGTTCAGTTGGTTCATCAGGGGCAGCTTCTCCGGCAGACTGGAACGCAGGTGGCGGCTCATCTGGACAGATGGATTACACCAACATTGACTGGAGTTTGGATAGAGGTTTGTCTGCGCCAAGGCCCAACGGGCTGTGGACAGGACTGCCTTCTATCATGAAGAGCAATCCCAATTTTTATGATCCAAAGCCTACTGGTATGGGTGCACAGCCTGGAATGAGAGCGGCTTCCTCTAACATGAGCGGCATCTCCTTTGTGGGACTGCAGGATGGAGCTGCTAATGGTGAAGCATCAGCCGCGGCCTCCCGAGAGTGGACTTCGCCATTCGAAGGAGAGGATCTTTTTAGTTTACCCAGACAGTTTGTTTCTTCTTCCCCTAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

569

Amino Acids

61.44

Weight (kDa)

8.9

Isoelectric Point (pI)

57.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_7 PF22562 74 - 116 6.8e-08 UBA-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 971
AarI CACCTGC 2 cut(s) 1259, 1361
Acc36I ACCTGC 4 cut(s) 865, 997, 1259, 1361
AccBSI CCGCTC 4 cut(s) 163, 412, 1547, 1566
AccII CGCG 1 cut(s) 1622
AciI CCGC 9 cut(s) 163, 412, 1047, 1293, 1377, 1547, 1566, 1620, 1622
AclWI GGATC 7 cut(s) 366, 563, 841, 1038, 1051, 1499, 1668
AcsI RAATTY 1 cut(s) 826
AcuI CTGAAG 5 cut(s) 476, 576, 773, 828, 926
AfaI GTAC 2 cut(s) 583, 1163
AfiI CCNNNNNNNGG 4 cut(s) 21, 578, 1635, 1652
AflII CTTAAG 1 cut(s) 511
AgeI ACCGGT 1 cut(s) 964
AgsI TTSAA 5 cut(s) 385, 439, 461, 934, 1152
AjnI CCWGG 6 cut(s) 91, 946, 1039, 1207, 1231, 1534
Alw21I GWGCWC 3 cut(s) 172, 1031, 1531
Alw44I GTGCAC 1 cut(s) 1527
AlwI GGATC 7 cut(s) 366, 563, 841, 1038, 1051, 1499, 1668
AlwNI CAGNNNCTG 2 cut(s) 98, 751
Ama87I CYCGRG 1 cut(s) 1629
AoxI GGCC 4 cut(s) 623, 1089, 1445, 1623
ApaLI GTGCAC 1 cut(s) 1527
ApoI RAATTY 1 cut(s) 826
AsiGI ACCGGT 1 cut(s) 964
AspA2I CCTAGG 1 cut(s) 1700
AspLEI GCGC 2 cut(s) 984, 1441
AspS9I GGNCC 3 cut(s) 1009, 1089, 1446
AsuHPI GGTGA 8 cut(s) 347, 497, 525, 578, 858, 938, 1026, 1619
AsuII TTCGAA 1 cut(s) 1650
AvaI CYCGRG 1 cut(s) 1629
AvaII GGWCC 1 cut(s) 1009
AvrII CCTAGG 1 cut(s) 1700
BaeGI GKGCMC 2 cut(s) 1107, 1531
BamHI GGATCC 1 cut(s) 1043
BanII GRGCYC 3 cut(s) 28, 172, 1031
Bbv12I GWGCWC 3 cut(s) 172, 1031, 1531
BccI CCATC 3 cut(s) 583, 1387, 1586
BciT130I CCWGG 6 cut(s) 93, 948, 1041, 1209, 1233, 1536
BciVI GTATCC 1 cut(s) 1071
BfaI CTAG 3 cut(s) 1116, 1137, 1701
BfmI CTRYAG 4 cut(s) 705, 743, 918, 1586
BfoI RGCGCY 1 cut(s) 985
BfrI CTTAAG 1 cut(s) 511
BfuAI ACCTGC 4 cut(s) 865, 997, 1259, 1361
BfuI GTATCC 1 cut(s) 1071
BglI GCCNNNNNGGC 1 cut(s) 1453
BlnI CCTAGG 1 cut(s) 1700
Bme1390I CCNGG 6 cut(s) 93, 948, 1041, 1209, 1233, 1536
Bme18I GGWCC 1 cut(s) 1009
BmeT110I CYCGRG 1 cut(s) 1629
BmgT120I GGNCC 3 cut(s) 1009, 1089, 1446
BmiI GGNNCC 3 cut(s) 963, 1011, 1045
BmrFI CCNGG 6 cut(s) 93, 948, 1041, 1209, 1233, 1536
BmsI GCATC 8 cut(s) 154, 179, 527, 872, 966, 1283, 1578, 1622
BpmI CTGGAG 1 cut(s) 1435
Bpu10I CCTNAGC 1 cut(s) 171
Bpu14I TTCGAA 1 cut(s) 1650
BpuEI CTTGAG 3 cut(s) 239, 428, 640
BsaJI CCNNGG 8 cut(s) 273, 353, 1231, 1243, 1303, 1442, 1620, 1700
BsaWI WCCGGW 2 cut(s) 37, 964
Bsc4I CCNNNNNNNGG 4 cut(s) 21, 578, 1635, 1652
Bse118I RCCGGY 2 cut(s) 964, 1091
Bse1I ACTGG 8 cut(s) 568, 800, 890, 1020, 1168, 1367, 1418, 1522
Bse3DI GCAATG 1 cut(s) 252
BseBI CCWGG 6 cut(s) 93, 948, 1041, 1209, 1233, 1536
BseDI CCNNGG 8 cut(s) 273, 353, 1231, 1243, 1303, 1442, 1620, 1700
BseGI GGATG 2 cut(s) 676, 1597
BseLI CCNNNNNNNGG 4 cut(s) 21, 578, 1635, 1652
BseMI GCAATG 1 cut(s) 252
BseMII CTCAG 3 cut(s) 185, 801, 1329
BseNI ACTGG 8 cut(s) 568, 800, 890, 1020, 1168, 1367, 1418, 1522
BseRI GAGGAG 1 cut(s) 636
BseSI GKGCMC 2 cut(s) 1107, 1531
BseYI CCCAGC 1 cut(s) 1219
Bsh1236I CGCG 1 cut(s) 1622
BshFI GGCC 4 cut(s) 625, 1091, 1447, 1625
BshTI ACCGGT 1 cut(s) 964
BsiHKAI GWGCWC 3 cut(s) 172, 1031, 1531
BsiHKCI CYCGRG 1 cut(s) 1629
BsiSI CCGG 4 cut(s) 38, 965, 1092, 1355
BslFI GGGAC 2 cut(s) 995, 1596
BslI CCNNNNNNNGG 4 cut(s) 21, 578, 1635, 1652
BsmFI GGGAC 2 cut(s) 995, 1596
BsnI GGCC 4 cut(s) 625, 1091, 1447, 1625
BsoBI CYCGRG 1 cut(s) 1629
Bsp119I TTCGAA 1 cut(s) 1650
Bsp1286I GDGCHC 5 cut(s) 28, 172, 1031, 1107, 1531
Bsp143I GATC 7 cut(s) 358, 487, 568, 833, 1043, 1504, 1660
Bsp19I CCATGG 1 cut(s) 273
BspACI CCGC 9 cut(s) 163, 412, 1047, 1293, 1377, 1547, 1566, 1620, 1622
BspANI GGCC 4 cut(s) 625, 1091, 1447, 1625
BspCNI CTCAG 3 cut(s) 184, 802, 1328
BspFNI CGCG 1 cut(s) 1622
BspHI TCATGA 1 cut(s) 1479
BspLI GGNNCC 3 cut(s) 963, 1011, 1045
BspMAI CTGCAG 3 cut(s) 709, 747, 1590
BspMI ACCTGC 4 cut(s) 865, 997, 1259, 1361
BspPI GGATC 7 cut(s) 366, 563, 841, 1038, 1051, 1499, 1668
BspQI GCTCTTC 1 cut(s) 1478
BspT104I TTCGAA 1 cut(s) 1650
BspTI CTTAAG 1 cut(s) 511
BsrBI CCGCTC 4 cut(s) 163, 412, 1547, 1566
BsrDI GCAATG 1 cut(s) 252
BsrFI RCCGGY 2 cut(s) 964, 1091
BsrI ACTGG 8 cut(s) 568, 800, 890, 1020, 1168, 1367, 1418, 1522
BssAI RCCGGY 2 cut(s) 964, 1091
BssECI CCNNGG 8 cut(s) 273, 353, 1231, 1243, 1303, 1442, 1620, 1700
BssMI GATC 7 cut(s) 358, 487, 568, 833, 1043, 1504, 1660
BssT1I CCWWGG 5 cut(s) 273, 353, 1303, 1442, 1700
Bst2UI CCWGG 6 cut(s) 93, 948, 1041, 1209, 1233, 1536
Bst4CI ACNGT 4 cut(s) 70, 435, 955, 1683
Bst6I CTCTTC 2 cut(s) 749, 1478
BstAFI CTTAAG 1 cut(s) 511
BstBI TTCGAA 1 cut(s) 1650
BstC8I GCNNGC 3 cut(s) 168, 593, 733
BstDEI CTNAG 4 cut(s) 171, 549, 810, 1315
BstDSI CCRYGG 2 cut(s) 273, 1620
BstF5I GGATG 2 cut(s) 676, 1597
BstFNI CGCG 1 cut(s) 1622
BstH2I RGCGCY 1 cut(s) 985
BstHHI GCGC 2 cut(s) 984, 1441
BstKTI GATC 7 cut(s) 361, 490, 571, 836, 1046, 1507, 1663
BstMBI GATC 7 cut(s) 358, 487, 568, 833, 1043, 1504, 1660
BstMWI GCNNNNNNNGC 8 cut(s) 275, 473, 1111, 1125, 1192, 1355, 1453, 1619
BstNI CCWGG 6 cut(s) 93, 948, 1041, 1209, 1233, 1536
BstNSI RCATGY 1 cut(s) 1114
BstSCI CCNGG 6 cut(s) 91, 946, 1039, 1207, 1231, 1534
BstSFI CTRYAG 4 cut(s) 705, 743, 918, 1586
BstSLI GKGCMC 2 cut(s) 1107, 1531
BstUI CGCG 1 cut(s) 1622
BstX2I RGATCY 2 cut(s) 1043, 1660
BstYI RGATCY 2 cut(s) 1043, 1660
BsuI GTATCC 1 cut(s) 1071
BsuRI GGCC 4 cut(s) 625, 1091, 1447, 1625
BtgI CCRYGG 2 cut(s) 273, 1620
BtsCI GGATG 2 cut(s) 676, 1597
BtsI GCAGTG 2 cut(s) 93, 199
BtsIMutI CAGTG 2 cut(s) 93, 199
BveI ACCTGC 4 cut(s) 865, 997, 1259, 1361
Cac8I GCNNGC 3 cut(s) 168, 593, 733
CaiI CAGNNNCTG 2 cut(s) 98, 751
CciI TCATGA 1 cut(s) 1479
CfoI GCGC 2 cut(s) 984, 1441
Cfr10I RCCGGY 2 cut(s) 964, 1091
Cfr13I GGNCC 3 cut(s) 1009, 1089, 1446
Cfr42I CCGCGG 1 cut(s) 1623
Csp6I GTAC 2 cut(s) 582, 1162
CspAI ACCGGT 1 cut(s) 964
CviAII CATG 7 cut(s) 182, 205, 274, 318, 1111, 1480, 1561
CviQI GTAC 2 cut(s) 582, 1162
DdeI CTNAG 4 cut(s) 171, 549, 810, 1315
DpnI GATC 7 cut(s) 360, 489, 570, 835, 1045, 1506, 1662
DpnII GATC 7 cut(s) 358, 487, 568, 833, 1043, 1504, 1660
Eam1104I CTCTTC 2 cut(s) 749, 1478
EarI CTCTTC 2 cut(s) 749, 1478
Ecl136II GAGCTC 2 cut(s) 170, 1029
Eco130I CCWWGG 5 cut(s) 273, 353, 1303, 1442, 1700
Eco24I GRGCYC 3 cut(s) 28, 172, 1031
Eco47I GGWCC 1 cut(s) 1009
Eco53kI GAGCTC 2 cut(s) 170, 1029
Eco57I CTGAAG 5 cut(s) 476, 576, 773, 828, 926
Eco88I CYCGRG 1 cut(s) 1629
EcoICRI GAGCTC 2 cut(s) 170, 1029
EcoO109I RGGNCCY 1 cut(s) 1009
EcoRII CCWGG 6 cut(s) 91, 946, 1039, 1207, 1231, 1534
EcoT14I CCWWGG 5 cut(s) 273, 353, 1303, 1442, 1700
EcoT38I GRGCYC 3 cut(s) 28, 172, 1031
ErhI CCWWGG 5 cut(s) 273, 353, 1303, 1442, 1700
FaeI CATG 7 cut(s) 185, 208, 277, 321, 1114, 1483, 1564
FaqI GGGAC 2 cut(s) 995, 1596
FatI CATG 7 cut(s) 181, 204, 273, 317, 1110, 1479, 1560
FokI GGATG 2 cut(s) 683, 1604
FriOI GRGCYC 3 cut(s) 28, 172, 1031
FspBI CTAG 3 cut(s) 1116, 1137, 1701
GlaI GCGC 2 cut(s) 983, 1440
GsaI CCCAGC 1 cut(s) 1223
GsuI CTGGAG 1 cut(s) 1435
HaeII RGCGCY 1 cut(s) 985
HaeIII GGCC 4 cut(s) 625, 1091, 1447, 1625
HapII CCGG 4 cut(s) 38, 965, 1092, 1355
HhaI GCGC 2 cut(s) 984, 1441
Hin1II CATG 7 cut(s) 185, 208, 277, 321, 1114, 1483, 1564
Hin6I GCGC 2 cut(s) 982, 1439
HinP1I GCGC 2 cut(s) 982, 1439
HincII GTYRAC 1 cut(s) 822
HindII GTYRAC 1 cut(s) 822
HindIII AAGCTT 3 cut(s) 215, 508, 593
HinfI GANTC 6 cut(s) 52, 308, 530, 725, 838, 1226
HpaII CCGG 4 cut(s) 38, 965, 1092, 1355
HphI GGTGA 8 cut(s) 347, 497, 525, 578, 858, 938, 1026, 1619
Hpy166II GTNNAC 5 cut(s) 822, 1461, 1529, 1638, 1673
Hpy188I TCNGA 6 cut(s) 129, 400, 495, 753, 1158, 1281
Hpy188III TCNNGA 9 cut(s) 80, 173, 210, 831, 895, 1078, 1386, 1480, 1629
Hpy8I GTNNAC 5 cut(s) 822, 1461, 1529, 1638, 1673
HpyAV CCTTC 9 cut(s) 287, 490, 660, 810, 852, 950, 1074, 1482, 1646
HpyCH4III ACNGT 4 cut(s) 70, 435, 955, 1683
HpyF10VI GCNNNNNNNGC 8 cut(s) 275, 473, 1111, 1125, 1192, 1355, 1453, 1619
HpyF3I CTNAG 4 cut(s) 171, 549, 810, 1315
Hsp92II CATG 7 cut(s) 185, 208, 277, 321, 1114, 1483, 1564
HspAI GCGC 2 cut(s) 982, 1439
KspI CCGCGG 1 cut(s) 1623
Kzo9I GATC 7 cut(s) 358, 487, 568, 833, 1043, 1504, 1660
LguI GCTCTTC 1 cut(s) 1478
LmnI GCTCC 2 cut(s) 95, 1595
LweI GCATC 8 cut(s) 154, 179, 527, 872, 966, 1283, 1578, 1622
MaeI CTAG 3 cut(s) 1116, 1137, 1701
MaeIII GTNAC 1 cut(s) 427
MalI GATC 7 cut(s) 360, 489, 570, 835, 1045, 1506, 1662
MbiI CCGCTC 4 cut(s) 163, 412, 1547, 1566
MboI GATC 7 cut(s) 358, 487, 568, 833, 1043, 1504, 1660
MfeI CAATTG 2 cut(s) 439, 1054
MflI RGATCY 2 cut(s) 1043, 1660
MhlI GDGCHC 5 cut(s) 28, 172, 1031, 1107, 1531
MluCI AATT 8 cut(s) 379, 387, 439, 685, 826, 1054, 1141, 1495
MmeI TCCRAC 4 cut(s) 674, 691, 753, 1304
MseI TTAA 3 cut(s) 512, 684, 881
MslI CAYNNNNRTG 1 cut(s) 1022
MspA1I CMGCKG 4 cut(s) 704, 1049, 1223, 1622
MspCI CTTAAG 1 cut(s) 511
MspI CCGG 4 cut(s) 38, 965, 1092, 1355
MspR9I CCNGG 6 cut(s) 93, 948, 1041, 1209, 1233, 1536
MunI CAATTG 2 cut(s) 439, 1054
MvaI CCWGG 6 cut(s) 93, 948, 1041, 1209, 1233, 1536
MvnI CGCG 1 cut(s) 1622
MwoI GCNNNNNNNGC 8 cut(s) 275, 473, 1111, 1125, 1192, 1355, 1453, 1619
NcoI CCATGG 1 cut(s) 273
NdeII GATC 7 cut(s) 358, 487, 568, 833, 1043, 1504, 1660
NlaIII CATG 7 cut(s) 185, 208, 277, 321, 1114, 1483, 1564
NlaIV GGNNCC 3 cut(s) 963, 1011, 1045
NmeAIII GCCGAG 1 cut(s) 1268
NspI RCATGY 1 cut(s) 1114
NspV TTCGAA 1 cut(s) 1650
PagI TCATGA 1 cut(s) 1479
PaqCI CACCTGC 2 cut(s) 1259, 1361
PciSI GCTCTTC 1 cut(s) 1478
PfeI GAWTC 6 cut(s) 52, 308, 530, 725, 838, 1226
PfoI TCCNGGA 2 cut(s) 1039, 1207
PinAI ACCGGT 1 cut(s) 964
PpuMI RGGWCCY 1 cut(s) 1009
PsiI TTATAA 1 cut(s) 971
Psp124BI GAGCTC 2 cut(s) 172, 1031
Psp5II RGGWCCY 1 cut(s) 1009
Psp6I CCWGG 6 cut(s) 91, 946, 1039, 1207, 1231, 1534
PspFI CCCAGC 1 cut(s) 1219
PspGI CCWGG 6 cut(s) 91, 946, 1039, 1207, 1231, 1534
PspN4I GGNNCC 3 cut(s) 963, 1011, 1045
PspPI GGNCC 3 cut(s) 1009, 1089, 1446
PspPPI RGGWCCY 1 cut(s) 1009
PsrI GAACNNNNNNTAC 2 cut(s) 1132, 1164
PstI CTGCAG 3 cut(s) 709, 747, 1590
PstNI CAGNNNCTG 2 cut(s) 98, 751
PsuI RGATCY 2 cut(s) 1043, 1660
PvuII CAGCTG 2 cut(s) 704, 1223
RsaI GTAC 2 cut(s) 583, 1163
RsaNI GTAC 2 cut(s) 582, 1162
RseI CAYNNNNRTG 1 cut(s) 1022
SacI GAGCTC 2 cut(s) 172, 1031
SacII CCGCGG 1 cut(s) 1623
SapI GCTCTTC 1 cut(s) 1478
SaqAI TTAA 3 cut(s) 512, 684, 881
Sau3AI GATC 7 cut(s) 358, 487, 568, 833, 1043, 1504, 1660
Sau96I GGNCC 3 cut(s) 1009, 1089, 1446
ScrFI CCNGG 6 cut(s) 93, 948, 1041, 1209, 1233, 1536
SduI GDGCHC 5 cut(s) 28, 172, 1031, 1107, 1531
SfaNI GCATC 8 cut(s) 154, 179, 527, 872, 966, 1283, 1578, 1622
SfcI CTRYAG 4 cut(s) 705, 743, 918, 1586
Sfr303I CCGCGG 1 cut(s) 1623
SfuI TTCGAA 1 cut(s) 1650
SgrBI CCGCGG 1 cut(s) 1623
SinI GGWCC 1 cut(s) 1009
SmiMI CAYNNNNRTG 1 cut(s) 1022
SmlI CTYRAG 4 cut(s) 218, 407, 511, 619
SmoI CTYRAG 4 cut(s) 218, 407, 511, 619
Sse9I AATT 8 cut(s) 379, 387, 439, 685, 826, 1054, 1141, 1495
SsiI CCGC 9 cut(s) 163, 412, 1047, 1293, 1377, 1547, 1566, 1620, 1622
SspMI CTAG 3 cut(s) 1116, 1137, 1701
SstI GAGCTC 2 cut(s) 172, 1031
StyD4I CCNGG 6 cut(s) 91, 946, 1039, 1207, 1231, 1534
StyI CCWWGG 5 cut(s) 273, 353, 1303, 1442, 1700
TaaI ACNGT 4 cut(s) 70, 435, 955, 1683
TaqI TCGA 3 cut(s) 836, 1077, 1650
TasI AATT 8 cut(s) 379, 387, 439, 685, 826, 1054, 1141, 1495
TauI GCSGC 7 cut(s) 166, 1295, 1380, 1550, 1569, 1622, 1625
TfiI GAWTC 6 cut(s) 52, 308, 530, 725, 838, 1226
Tru1I TTAA 3 cut(s) 512, 684, 881
Tru9I TTAA 3 cut(s) 512, 684, 881
TscAI CASTG 2 cut(s) 93, 199
TspDTI ATGAA 5 cut(s) 17, 198, 306, 1326, 1496
TspGWI ACGGA 1 cut(s) 113
TspRI CASTG 2 cut(s) 93, 199
Vha464I CTTAAG 1 cut(s) 511
VneI GTGCAC 1 cut(s) 1527
VpaK11BI GGWCC 1 cut(s) 1009
XapI RAATTY 1 cut(s) 826
XceI RCATGY 1 cut(s) 1114
XcmI CCANNNNNNNNNTGG 1 cut(s) 774
XmaJI CCTAGG 1 cut(s) 1700
XspI CTAG 3 cut(s) 1116, 1137, 1701
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.