pycom04g07370

Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
7842231 .. 7843939
1709 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g07370.2

Sequence Viewer

Length: 1233 bp
ATGAAGGGGACTGATGCAGACAACCCTGAAATCACGATTGAAAGGGCTGCAAGTGATGAGGAACCATTTGCTGGGCTAGCATTCAAGATCATGAGTGATCCATTTGTGGGATCCCTTACATTTGTGAGAATATATGCAGGAAAGCTAACTGCTGGATCCTATGTGTTAAATGCAAACAAGGGAAAGAAGGAGAGGATTGGTAGACTTCTAGAAATGCATGCAAACAGTAGGGAGGATGTAAAGGTAGCTTTAGCTGGTGATATCGTTGCACTTGCAGGCCTGAAGGATACCATTACCGGTGAAACATTGAGTGACCCCGATCATCCTATTGTGCTCGAACGAATGGACTTCCCTGATCCTGTAATTAAGGTTGCCATTGAACCCAAAACTAAAGCTGATGTTGATAAGATGGGAGCTGGTTTGGTTAAGCTTGCTCAAGAAGACCCTTCCTTCCACTTCTCTCGGGATGAAGAGATCAACCAGACAGTGATTGAAGGAATGGGAGAATTGCATCTTGAGATTATTGTTGATCGGCTCAAGAGAGAATTCAAGGTTGAAGCAAATGTTGGTGCACCCCAGGTAAACTACCGGGAAAGCATTTCGAGAACCTCTGAAGTGAGGTATGTGCACAAGAAACAATCAGGTGGACAAGGTCAATTTGCAGATGTCACCGTACGGTTTGAACCAATGGAGGCTGGCGGAGGATATGAGTTTAAGAGTGAAATCAAGGGAGGTGCAGTGCCAAGAGAATACATTCCTGGGGTGATGAAAGGATTAGAGGAGTGTATGAGCAACGGTGTGCTTGCAGGCTTTCCTGTTGTTGACGTACGCGCTGTACTAGTTGATGGTTCTTACCATGATGTTGACTCAAGTGTGTTAGCATTTCAATTGGCAGCAAGAGGAGCTTTCCGGGAGGGGATAAAGAAAGCTGCCCCGAAAATGCTTGAACCAATAATGAAAGTTGAAGTTGTTACACCAGAAGAACATCTCGGAGATGTGATTGGTGATCTTAACTCGAGGAGAGGACAGATCAACAGCTTCAATGACAAACCTGGTGGTCTCAAGGTGGTGGATTCACTGGTTCCTCTTGCGGAGATGTTTCAGTACGTGAGTACGCTGAGGGGCATGACGAAAGGTCGTGCATCGTATACAATGCAGTTAGCTAAGTTTGACGTTGTTCCTCAGCACATTCAGAACCAGCTTGCTGCCAAGGAGGAAGAAGTTGCTGCTTGA

Protein Analysis

411

Amino Acids

44.76

Weight (kDa)

5.33

Isoelectric Point (pI)

34.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 71
AccI GTMKAC 2 cut(s) 202, 1148
AccII CGCG 1 cut(s) 831
AciI CCGC 2 cut(s) 699, 1091
AclWI GGATC 6 cut(s) 92, 105, 118, 150, 163, 350
AcsI RAATTY 1 cut(s) 545
AcuI CTGAAG 2 cut(s) 302, 633
AfaI GTAC 5 cut(s) 675, 828, 837, 1106, 1114
AfiI CCNNNNNNNGG 2 cut(s) 71, 107
AgeI ACCGGT 1 cut(s) 296
AhdI GACNNNNNGTC 1 cut(s) 1134
AhlI ACTAGT 1 cut(s) 838
AjnI CCWGG 3 cut(s) 576, 757, 1051
AjuI GAANNNNNNNTTGG 2 cut(s) 549, 581
Alw21I GWGCWC 3 cut(s) 336, 574, 630
Alw26I GTCTC 1 cut(s) 1064
Alw44I GTGCAC 2 cut(s) 570, 626
AlwI GGATC 6 cut(s) 92, 105, 118, 150, 163, 350
Ama87I CYCGRG 2 cut(s) 462, 1015
AoxI GGCC 1 cut(s) 277
ApaLI GTGCAC 2 cut(s) 570, 626
ApeKI GCWGC 5 cut(s) 47, 893, 929, 1205, 1226
ApoI RAATTY 1 cut(s) 545
AsiGI ACCGGT 1 cut(s) 296
Asp700I GAANNNNTTC 1 cut(s) 753
AspLEI GCGC 1 cut(s) 833
AsuC2I CCSGG 2 cut(s) 590, 911
AsuHPI GGTGA 5 cut(s) 269, 311, 661, 775, 1016
AsuNHI GCTAGC 1 cut(s) 76
AvaI CYCGRG 2 cut(s) 462, 1015
BaeGI GKGCMC 2 cut(s) 574, 630
BamHI GGATCC 2 cut(s) 110, 155
BbsI GAAGAC 1 cut(s) 447
Bbv12I GWGCWC 3 cut(s) 336, 574, 630
BbvCI CCTCAGC 2 cut(s) 1118, 1182
BbvI GCAGC 5 cut(s) 34, 905, 916, 1192, 1213
BccI CCATC 2 cut(s) 403, 839
BciT130I CCWGG 3 cut(s) 578, 759, 1053
BciVI GTATCC 1 cut(s) 280
BcnI CCSGG 2 cut(s) 590, 911
BcoDI GTCTC 1 cut(s) 1064
BcuI ACTAGT 1 cut(s) 838
BfaI CTAG 3 cut(s) 77, 209, 839
BfuI GTATCC 1 cut(s) 280
BisI GCNGC 5 cut(s) 48, 894, 930, 1206, 1227
BlsI GCNGC 5 cut(s) 49, 895, 931, 1207, 1228
Bme1390I CCNGG 5 cut(s) 578, 590, 759, 911, 1053
BmeRI GACNNNNNGTC 1 cut(s) 1134
BmeT110I CYCGRG 2 cut(s) 462, 1015
BmiI GGNNCC 4 cut(s) 63, 112, 157, 1083
BmrFI CCNGG 5 cut(s) 578, 590, 759, 911, 1053
BmsI GCATC 3 cut(s) 4, 520, 1151
BmtI GCTAGC 1 cut(s) 80
BpiI GAAGAC 1 cut(s) 447
Bpu10I CCTNAGC 2 cut(s) 1118, 1182
BpuEI CTTGAG 5 cut(s) 420, 521, 536, 853, 1046
BpuMI CCSGG 2 cut(s) 590, 911
BsaAI YACGTR 1 cut(s) 1108
BsaI GGTCTC 1 cut(s) 1064
BsaJI CCNNGG 3 cut(s) 576, 758, 1209
BsaWI WCCGGW 1 cut(s) 296
BsaXI ACNNNNNCTCC 2 cut(s) 723, 753
Bsc4I CCNNNNNNNGG 2 cut(s) 71, 107
Bse118I RCCGGY 1 cut(s) 296
Bse1I ACTGG 1 cut(s) 1083
BseBI CCWGG 3 cut(s) 578, 759, 1053
BseDI CCNNGG 3 cut(s) 576, 758, 1209
BseGI GGATG 3 cut(s) 241, 322, 472
BseLI CCNNNNNNNGG 2 cut(s) 71, 107
BseMII CTCAG 2 cut(s) 1109, 1196
BseNI ACTGG 1 cut(s) 1083
BseRI GAGGAG 3 cut(s) 794, 915, 1033
BseSI GKGCMC 2 cut(s) 574, 630
BseXI GCAGC 5 cut(s) 34, 905, 916, 1192, 1213
BseYI CCCAGC 1 cut(s) 71
BsgI GTGCAG 1 cut(s) 756
Bsh1236I CGCG 1 cut(s) 831
BshFI GGCC 1 cut(s) 279
BshTI ACCGGT 1 cut(s) 296
BsiHKAI GWGCWC 3 cut(s) 336, 574, 630
BsiHKCI CYCGRG 2 cut(s) 462, 1015
BsiSI CCGG 3 cut(s) 297, 589, 910
BsiWI CGTACG 2 cut(s) 673, 826
BslFI GGGAC 1 cut(s) 22
BslI CCNNNNNNNGG 2 cut(s) 71, 107
BsmAI GTCTC 1 cut(s) 1064
BsmFI GGGAC 1 cut(s) 22
BsmI GAATGC 1 cut(s) 80
BsnI GGCC 1 cut(s) 279
Bso31I GGTCTC 1 cut(s) 1064
BsoBI CYCGRG 2 cut(s) 462, 1015
Bsp1286I GDGCHC 3 cut(s) 336, 574, 630
BspACI CCGC 2 cut(s) 699, 1091
BspANI GGCC 1 cut(s) 279
BspCNI CTCAG 2 cut(s) 1110, 1195
BspFNI CGCG 1 cut(s) 831
BspHI TCATGA 1 cut(s) 90
BspLI GGNNCC 4 cut(s) 63, 112, 157, 1083
BspOI GCTAGC 1 cut(s) 80
BspPI GGATC 6 cut(s) 92, 105, 118, 150, 163, 350
BspTNI GGTCTC 1 cut(s) 1064
BsrFI RCCGGY 1 cut(s) 296
BsrI ACTGG 1 cut(s) 1083
BssAI RCCGGY 1 cut(s) 296
BssECI CCNNGG 3 cut(s) 576, 758, 1209
BssNAI GTATAC 1 cut(s) 1149
BssT1I CCWWGG 1 cut(s) 1209
Bst1107I GTATAC 1 cut(s) 1149
Bst2UI CCWGG 3 cut(s) 578, 759, 1053
Bst4CI ACNGT 5 cut(s) 227, 487, 673, 678, 797
Bst6I CTCTTC 1 cut(s) 465
BstBAI YACGTR 1 cut(s) 1108
BstC8I GCNNGC 8 cut(s) 78, 219, 277, 432, 697, 804, 808, 1203
BstDEI CTNAG 3 cut(s) 1118, 1164, 1182
BstF5I GGATG 3 cut(s) 241, 322, 472
BstFNI CGCG 1 cut(s) 831
BstHHI GCGC 1 cut(s) 833
BstMAI GTCTC 1 cut(s) 1064
BstMWI GCNNNNNNNGC 2 cut(s) 77, 902
BstNI CCWGG 3 cut(s) 578, 759, 1053
BstNSI RCATGY 1 cut(s) 221
BstSCI CCNGG 5 cut(s) 576, 588, 757, 909, 1051
BstSLI GKGCMC 2 cut(s) 574, 630
BstUI CGCG 1 cut(s) 831
BstV1I GCAGC 5 cut(s) 34, 905, 916, 1192, 1213
BstV2I GAAGAC 1 cut(s) 447
BstX2I RGATCY 2 cut(s) 110, 155
BstYI RGATCY 2 cut(s) 110, 155
BstZ17I GTATAC 1 cut(s) 1149
BsuI GTATCC 1 cut(s) 280
BsuRI GGCC 1 cut(s) 279
BtsCI GGATG 3 cut(s) 241, 322, 472
BtsI GCAGTG 1 cut(s) 744
BtsIMutI CAGTG 3 cut(s) 492, 744, 1076
Cac8I GCNNGC 8 cut(s) 78, 219, 277, 432, 697, 804, 808, 1203
CciI TCATGA 1 cut(s) 90
CfoI GCGC 1 cut(s) 833
Cfr10I RCCGGY 1 cut(s) 296
CsiI ACCWGGT 1 cut(s) 1051
Csp6I GTAC 5 cut(s) 674, 827, 836, 1105, 1113
CspAI ACCGGT 1 cut(s) 296
CspCI CAANNNNNGTGG 2 cut(s) 1036, 1071
CviAII CATG 4 cut(s) 91, 218, 857, 1126
CviQI GTAC 5 cut(s) 674, 827, 836, 1105, 1113
DdeI CTNAG 3 cut(s) 1118, 1164, 1182
DriI GACNNNNNGTC 1 cut(s) 1134
Eam1104I CTCTTC 1 cut(s) 465
Eam1105I GACNNNNNGTC 1 cut(s) 1134
EarI CTCTTC 1 cut(s) 465
EciI GGCGGA 1 cut(s) 714
Eco130I CCWWGG 1 cut(s) 1209
Eco147I AGGCCT 1 cut(s) 279
Eco31I GGTCTC 1 cut(s) 1064
Eco32I GATATC 1 cut(s) 262
Eco57I CTGAAG 2 cut(s) 302, 633
Eco88I CYCGRG 2 cut(s) 462, 1015
EcoRI GAATTC 1 cut(s) 545
EcoRII CCWGG 3 cut(s) 576, 757, 1051
EcoRV GATATC 1 cut(s) 262
EcoT14I CCWWGG 1 cut(s) 1209
EcoT22I ATGCAT 1 cut(s) 219
ErhI CCWWGG 1 cut(s) 1209
FaeI CATG 4 cut(s) 94, 221, 860, 1129
FalI AAGNNNNNCTT 2 cut(s) 889, 921
FaqI GGGAC 1 cut(s) 22
FatI CATG 4 cut(s) 90, 217, 856, 1125
FblI GTMKAC 2 cut(s) 202, 1148
Fnu4HI GCNGC 5 cut(s) 48, 894, 930, 1206, 1227
FokI GGATG 3 cut(s) 248, 309, 479
Fsp4HI GCNGC 5 cut(s) 48, 894, 930, 1206, 1227
FspBI CTAG 3 cut(s) 77, 209, 839
GlaI GCGC 1 cut(s) 832
GluI GCNGC 5 cut(s) 48, 894, 930, 1206, 1227
GsaI CCCAGC 1 cut(s) 75
HaeIII GGCC 1 cut(s) 279
HapII CCGG 3 cut(s) 297, 589, 910
HhaI GCGC 1 cut(s) 833
Hin1II CATG 4 cut(s) 94, 221, 860, 1129
Hin6I GCGC 1 cut(s) 831
HinP1I GCGC 1 cut(s) 831
HincII GTYRAC 2 cut(s) 823, 865
HindII GTYRAC 2 cut(s) 823, 865
HindIII AAGCTT 1 cut(s) 428
HinfI GANTC 2 cut(s) 866, 1073
HpaII CCGG 3 cut(s) 297, 589, 910
HphI GGTGA 5 cut(s) 269, 311, 661, 775, 1016
Hpy166II GTNNAC 8 cut(s) 203, 572, 583, 628, 647, 823, 865, 1149
Hpy188I TCNGA 3 cut(s) 613, 992, 1194
Hpy188III TCNNGA 9 cut(s) 34, 85, 91, 209, 437, 464, 515, 538, 603
Hpy8I GTNNAC 8 cut(s) 203, 572, 583, 628, 647, 823, 865, 1149
HpyAV CCTTC 5 cut(s) 181, 277, 456, 460, 488
HpyCH4III ACNGT 5 cut(s) 227, 487, 673, 678, 797
HpyCH4IV ACGT 3 cut(s) 825, 1107, 1173
HpyF10VI GCNNNNNNNGC 2 cut(s) 77, 902
HpyF3I CTNAG 3 cut(s) 1118, 1164, 1182
HpySE526I ACGT 3 cut(s) 825, 1107, 1173
Hsp92II CATG 4 cut(s) 94, 221, 860, 1129
HspAI GCGC 1 cut(s) 831
LmnI GCTCC 2 cut(s) 413, 902
Lsp1109I GCAGC 5 cut(s) 34, 905, 916, 1192, 1213
LweI GCATC 3 cut(s) 4, 520, 1151
MabI ACCWGGT 1 cut(s) 1051
MaeI CTAG 3 cut(s) 77, 209, 839
MaeII ACGT 3 cut(s) 825, 1107, 1173
MaeIII GTNAC 3 cut(s) 311, 667, 970
MboII GAAGA 4 cut(s) 452, 482, 992, 1229
MfeI CAATTG 1 cut(s) 887
MflI RGATCY 2 cut(s) 110, 155
MhlI GDGCHC 3 cut(s) 336, 574, 630
MluCI AATT 5 cut(s) 363, 506, 545, 656, 887
MlyI GAGTC 1 cut(s) 860
Mph1103I ATGCAT 1 cut(s) 219
MroXI GAANNNNTTC 1 cut(s) 753
MseI TTAA 5 cut(s) 167, 366, 426, 714, 1011
MspI CCGG 3 cut(s) 297, 589, 910
MspR9I CCNGG 5 cut(s) 578, 590, 759, 911, 1053
MunI CAATTG 1 cut(s) 887
Mva1269I GAATGC 1 cut(s) 80
MvaI CCWGG 3 cut(s) 578, 759, 1053
MvnI CGCG 1 cut(s) 831
MwoI GCNNNNNNNGC 2 cut(s) 77, 902
NciI CCSGG 2 cut(s) 590, 911
NheI GCTAGC 1 cut(s) 76
NlaIII CATG 4 cut(s) 94, 221, 860, 1129
NlaIV GGNNCC 4 cut(s) 63, 112, 157, 1083
NmuCI GTSAC 2 cut(s) 311, 667
NsiI ATGCAT 1 cut(s) 219
NspI RCATGY 1 cut(s) 221
PaeI GCATGC 1 cut(s) 221
PaeR7I CTCGAG 1 cut(s) 1015
PagI TCATGA 1 cut(s) 90
PceI AGGCCT 1 cut(s) 279
PctI GAATGC 1 cut(s) 80
PdmI GAANNNNTTC 1 cut(s) 753
PfeI GAWTC 1 cut(s) 1073
Pfl23II CGTACG 2 cut(s) 673, 826
PflFI GACNNNGTC 1 cut(s) 651
PflMI CCANNNNNTGG 1 cut(s) 71
PfoI TCCNGGA 1 cut(s) 909
PinAI ACCGGT 1 cut(s) 296
PkrI GCNGC 5 cut(s) 49, 895, 931, 1207, 1228
PleI GAGTC 1 cut(s) 860
PpsI GAGTC 1 cut(s) 860
Ppu21I YACGTR 1 cut(s) 1108
Psp6I CCWGG 3 cut(s) 576, 757, 1051
PspFI CCCAGC 1 cut(s) 71
PspGI CCWGG 3 cut(s) 576, 757, 1051
PspLI CGTACG 2 cut(s) 673, 826
PspN4I GGNNCC 4 cut(s) 63, 112, 157, 1083
PspXI VCTCGAGB 1 cut(s) 1015
PsuI RGATCY 2 cut(s) 110, 155
PsyI GACNNNGTC 1 cut(s) 651
RsaI GTAC 5 cut(s) 675, 828, 837, 1106, 1114
RsaNI GTAC 5 cut(s) 674, 827, 836, 1105, 1113
SaqAI TTAA 5 cut(s) 167, 366, 426, 714, 1011
SatI GCNGC 5 cut(s) 48, 894, 930, 1206, 1227
SchI GAGTC 1 cut(s) 860
ScrFI CCNGG 5 cut(s) 578, 590, 759, 911, 1053
SduI GDGCHC 3 cut(s) 336, 574, 630
SexAI ACCWGGT 1 cut(s) 1051
SfaNI GCATC 3 cut(s) 4, 520, 1151
Sfr274I CTCGAG 1 cut(s) 1015
SlaI CTCGAG 1 cut(s) 1015
SmlI CTYRAG 6 cut(s) 435, 515, 536, 868, 1015, 1061
SmoI CTYRAG 6 cut(s) 435, 515, 536, 868, 1015, 1061
SpeI ACTAGT 1 cut(s) 838
SphI GCATGC 1 cut(s) 221
Sse9I AATT 5 cut(s) 363, 506, 545, 656, 887
SseBI AGGCCT 1 cut(s) 279
SsiI CCGC 2 cut(s) 699, 1091
SspMI CTAG 3 cut(s) 77, 209, 839
StuI AGGCCT 1 cut(s) 279
StyD4I CCNGG 5 cut(s) 576, 588, 757, 909, 1051
StyI CCWWGG 1 cut(s) 1209
TaaI ACNGT 5 cut(s) 227, 487, 673, 678, 797
TaiI ACGT 3 cut(s) 828, 1110, 1176
TaqI TCGA 3 cut(s) 336, 602, 1016
TasI AATT 5 cut(s) 363, 506, 545, 656, 887
TatI WGTACW 1 cut(s) 835
TfiI GAWTC 1 cut(s) 1073
Tru1I TTAA 5 cut(s) 167, 366, 426, 714, 1011
Tru9I TTAA 5 cut(s) 167, 366, 426, 714, 1011
TscAI CASTG 3 cut(s) 492, 744, 1083
TseFI GTSAC 2 cut(s) 311, 667
TseI GCWGC 5 cut(s) 47, 893, 929, 1205, 1226
Tsp45I GTSAC 2 cut(s) 311, 667
TspDTI ATGAA 4 cut(s) 17, 483, 782, 971
TspRI CASTG 3 cut(s) 492, 744, 1083
Tth111I GACNNNGTC 1 cut(s) 651
Van91I CCANNNNNTGG 1 cut(s) 71
VneI GTGCAC 2 cut(s) 570, 626
XapI RAATTY 1 cut(s) 545
XbaI TCTAGA 1 cut(s) 208
XceI RCATGY 1 cut(s) 221
XhoI CTCGAG 1 cut(s) 1015
XmiI GTMKAC 2 cut(s) 202, 1148
XmnI GAANNNNTTC 1 cut(s) 753
XspI CTAG 3 cut(s) 77, 209, 839
Zsp2I ATGCAT 1 cut(s) 219
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.