Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000228.1

Orthogroup ID

OG0010128

Physical Location & Seq

Genomic Coordinates Forward (+)

13950 .. 17813

Gene Structure 3864 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000228.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2352 bp

atggctacagagtcagtcagagtagtccacagtttcagcttcaatgggtctcagacaaggcctaccatccctctctccccagctcgctttctgggtcttcgtcctcctcgttcttcttcttcttcttcttctctcagctcgtcttcactttcccagttctttgggaatctgcgtctctcctccaactcctcaaaggcctctcatttgcgccaacacagccgaagaaacctctctgttttcgccatggccgccgatgatggaaagcgtgcagtaccattggtagattatcggaatattggaattatggctcacatagatgcagggaagactactacaactgaacggattttgtactatactggaagaaactataaaattggggaggtgcatgaaggaacagcaactatggactggatggagcaggaacaagaaagaggcattaccataacttctgcagcaactacaacattttgggacaaacacagaattaacattattgatactcctggccatgtcgacttcaccctcgaagtggagcgagctctcagggtacttgatggcgcaatatgcttgtttgacagtgttgctggggtggaacctcagtctgaaactgtgtggaggcaagctgataaatatggggtgcccaggatttgctttgtcaacaaaatggatcgtcttggggcaaactttttccgcacaagggacatgatagtgacaaatttgggtgccaaaccacttgtacttcaaattccagttggtgccgaagataattttaagggagttattgatcttgtgaagatgagagctatactttggtcaggagaagaattgggtgcaaagttttcgtatgaggatattccatctgatcttcaggagttggctgacgaatacaggtcactgatgatagaaaccatagttgagttggatgatgaagctatggagggctatctagaaggagttgaacctgatgaggccaccattaagaaattgattaggcagggaaccatctcagctagttttgtgccagtattatgtggctcagcttttaaaaataagggggttcaaccattgctcgatgctgtcgtggattatttaccttcaccgcttgatgtgccaccaatgcagggaactgatgcagataacccagaaatcacgattgagagggctgcaagtgatgatgaaccatttgctgggctggcattcaagatcatgagtgatccatttgtgggatcccttacatttgtgagaatctatgcaggaaagctaactgctggatcatacgtgctgaatgcaaacaaggggaaaaaggagaggatcggtagacttctagaaatgcatgcaaacagtagggaggatgttaaggttgctttagctggtgatattgttgctcttgcaggtctaaaagatactgttactggtgaaacattgagtgaccctgagcatcctattgtgcttgaacgtatggaattccctgatcctgtgattaaggtggcaattgaacccaaaactaaagccgatgttgataagatgggagctggtttggttaaacttgctcaggaagacccttcgttccacttctcaagggatgaagaggtcaatcagacagtgatcgaaggaatgggtgaattgcatcttgagattattgttgatcgcctcaagagggaattcaaggtcgaggcaaatgttggagcaccccaggtaaactaccgtgaaagcatttctaaagtcgcagaagtaaagtatgtgcacaagaaacaatctggcggacaaggtcaattcgcagatatcacaatccgatttgaacccatggagcctggtaatggatacgaattcaagagtgaaatcaagggaggtgcagtgccaagagagtacattcctggcgtgatgaaaggactagaggagtgtatgagtaacggtgtgcttgcgggctttcctgtcgtcgacgtgcgtgctgtactagttgatggttcttaccacgatgttgactcgagtgttttggcattccagttggcagctagaggagctttccgagagggtatgaagagagccggcccaaaaatgcttgaacctattatgaaagttgaagtagttacacctgaagaacatttgggagatgtaattggtgaccttaactccaggagaggtcaaatcaacagctttagtgacaaacctggtggtctcaaggtggttgattctttggttcctcttgcggagatgttccaatatgttagtacactcaggggcatgacaaaaggtcgtgcatcctacacgatgcaattagctaggtttgatgttgttcctcagcacattcagaaccaacttgccgctaaggaggaagaagttgccgcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006996 GO:0007275 GO:0008144 GO:0008150 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009658 GO:0009791 GO:0009845 GO:0009941 GO:0009987 GO:0016043 GO:0017076 GO:0030554 GO:0031967 GO:0031975 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0048856 GO:0071840 GO:0090351 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

EFG_C EFG_II EFG_IV GTP_EFTU GTP_EFTU_D2

Protein Analysis

783

Amino Acids

86.11

Weight (kDa)

5.36

Isoelectric Point (pI)

38.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010128)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G62750
fragaria_vesca	FvH4_5g00390 FvH4_5g00390 FvH4_5g00390 FvH4_5g00390
malus_domestica	MD04G1081800.v1.1 MD06G1065300.v1.1
prunus_persica	Prupe.5G076600_v2.0.a1 Prupe.5G076600_v2.0.a1
pyrus_communis	pycom04g07370 pycom06g05630
rosa_chinensis	RchiOBHm_Chr7g0202121
rosa_laevigata	RLG00000003624
rosa_multiflora	Rmu_ssc0000228.1_g000002
rosa_roxburghii	Rroxscaffold_3G00254840
rosa_rugosa	Rorug07G0068100
rosa_samantha	Rh7AG195600 Rh7BG196900 Rh7CG206700 Rh7DG202200
rosa_wichuraiana	Rw7G017130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1385
AccB1I	GGYRCC	3 cut(s)	640, 725, 758
AccB7I	CCANNNNNTGG	1 cut(s)	1190
AccI	GTMKAC	3 cut(s)	516, 1321, 1941
AciI	CCGC	8 cut(s)	249, 694, 1103, 1764, 1925, 2210, 2325, 2346
AclWI	GGATC	7 cut(s)	678, 1211, 1224, 1237, 1282, 1322, 1469
AcoI	YGGCCR	2 cut(s)	246, 508
AcsI	RAATTY	5 cut(s)	718, 747, 1466, 1664, 1829
AcuI	CTGAAG	2 cut(s)	854, 2118
AfaI	GTAC	7 cut(s)	273, 353, 552, 741, 1871, 1956, 2233
AfiI	CCNNNNNNNGG	7 cut(s)	532, 700, 1124, 1190, 1226, 1660, 1820
AhdI	GACNNNNNGTC	1 cut(s)	2253
AhlI	ACTAGT	1 cut(s)	1957
AjiI	CACGTC	1 cut(s)	1945
AjnI	CCWGG	7 cut(s)	505, 644, 1695, 1813, 1876, 2135, 2170
Alw21I	GWGCWC	3 cut(s)	544, 1693, 1749
Alw26I	GTCTC	3 cut(s)	54, 179, 2183
Alw44I	GTGCAC	1 cut(s)	1745
AlwI	GGATC	7 cut(s)	678, 1211, 1224, 1237, 1282, 1322, 1469
Ama87I	CYCGRG	1 cut(s)	1987
AoxI	GGCC	6 cut(s)	59, 195, 246, 508, 972, 2050
ApaLI	GTGCAC	1 cut(s)	1745
ApeKI	GCWGC	3 cut(s)	455, 1166, 2012
ApoI	RAATTY	5 cut(s)	718, 747, 1466, 1664, 1829
AspLEI	GCGC	2 cut(s)	210, 563
AspS9I	GGNCC	1 cut(s)	2051
AsuHPI	GGTGA	6 cut(s)	514, 1092, 1388, 1430, 1634, 2135
AvaI	CYCGRG	1 cut(s)	1987
BaeGI	GKGCMC	2 cut(s)	645, 1749
BalI	TGGCCA	1 cut(s)	510
BamHI	GGATCC	1 cut(s)	1229
BanI	GGYRCC	3 cut(s)	640, 725, 758
BanII	GRGCYC	1 cut(s)	544
BbsI	GAAGAC	4 cut(s)	89, 135, 332, 1566
Bbv12I	GWGCWC	3 cut(s)	544, 1693, 1749
BbvCI	CCTCAGC	1 cut(s)	2301
BbvI	GCAGC	3 cut(s)	467, 1153, 2024
BccI	CCATC	8 cut(s)	74, 251, 409, 551, 868, 1013, 1522, 1958
BcgI	CGANNNNNNTGC	4 cut(s)	825, 859, 1931, 1965
BciT130I	CCWGG	7 cut(s)	507, 646, 1697, 1815, 1878, 2137, 2172
BciVI	GTATCC	1 cut(s)	1817
BcoDI	GTCTC	3 cut(s)	54, 179, 2183
BcuI	ACTAGT	1 cut(s)	1957
BfaI	CTAG	7 cut(s)	950, 1014, 1328, 1895, 1958, 2016, 2283
BfmI	CTRYAG	2 cut(s)	6, 453
BfuAI	ACCTGC	1 cut(s)	1385
BfuI	GTATCC	1 cut(s)	1817
BisI	GCNGC	6 cut(s)	249, 456, 1167, 2013, 2325, 2346
BlpI	GCTNAGC	1 cut(s)	1039
BlsI	GCNGC	6 cut(s)	250, 457, 1168, 2014, 2326, 2347
Bme1390I	CCNGG	7 cut(s)	507, 646, 1697, 1815, 1878, 2137, 2172
BmeRI	GACNNNNNGTC	1 cut(s)	2253
BmeT110I	CYCGRG	1 cut(s)	1987
BmgBI	CACGTC	1 cut(s)	1945
BmgT120I	GGNCC	1 cut(s)	2051
BmiI	GGNNCC	8 cut(s)	597, 642, 727, 760, 1003, 1231, 1812, 2202
BmrFI	CCNGG	7 cut(s)	507, 646, 1697, 1815, 1878, 2137, 2172
BmrI	ACTGGG	1 cut(s)	148
BmsI	GCATC	7 cut(s)	307, 1066, 1123, 1450, 1639, 2262, 2270
BmuI	ACTGGG	1 cut(s)	148
BpiI	GAAGAC	4 cut(s)	89, 135, 332, 1566
BpmI	CTGGAG	1 cut(s)	2119
Bpu10I	CCTNAGC	4 cut(s)	1437, 1554, 2301, 2328
Bpu1102I	GCTNAGC	1 cut(s)	1039
BpuEI	CTTGAG	4 cut(s)	1564, 1640, 1655, 2165
BsaAI	YACGTR	1 cut(s)	1282
BsaI	GGTCTC	2 cut(s)	54, 2183
BsaJI	CCNNGG	4 cut(s)	243, 644, 1695, 1806
BsaXI	ACNNNNNCTCC	4 cut(s)	1842, 1872, 2117, 2147
Bsc4I	CCNNNNNNNGG	7 cut(s)	532, 700, 1124, 1190, 1226, 1660, 1820
Bse118I	RCCGGY	1 cut(s)	2048
Bse1I	ACTGG	7 cut(s)	154, 364, 416, 752, 1025, 1420, 2005
Bse3DI	GCAATG	1 cut(s)	1067
BseBI	CCWGG	7 cut(s)	507, 646, 1697, 1815, 1878, 2137, 2172
BseDI	CCNNGG	4 cut(s)	243, 644, 1695, 1806
BseGI	GGATG	7 cut(s)	66, 420, 931, 1360, 1441, 1591, 2261
BseLI	CCNNNNNNNGG	7 cut(s)	532, 700, 1124, 1190, 1226, 1660, 1820
BseMI	GCAATG	1 cut(s)	1067
BseNI	ACTGG	7 cut(s)	154, 364, 416, 752, 1025, 1420, 2005
BseRI	GAGGAG	5 cut(s)	96, 169, 178, 1913, 2034
BseSI	GKGCMC	2 cut(s)	645, 1749
BseXI	GCAGC	3 cut(s)	467, 1153, 2024
BseYI	CCCAGC	3 cut(s)	79, 587, 1190
BsgI	GTGCAG	2 cut(s)	288, 1875
BshFI	GGCC	6 cut(s)	61, 197, 248, 510, 974, 2052
BshNI	GGYRCC	3 cut(s)	640, 725, 758
BsiHKAI	GWGCWC	3 cut(s)	544, 1693, 1749
BsiHKCI	CYCGRG	1 cut(s)	1987
BsiSI	CCGG	1 cut(s)	2049
BslFI	GGGAC	2 cut(s)	488, 716
BslI	CCNNNNNNNGG	7 cut(s)	532, 700, 1124, 1190, 1226, 1660, 1820
BsmAI	GTCTC	3 cut(s)	54, 179, 2183
BsmBI	CGTCTC	1 cut(s)	179
BsmFI	GGGAC	2 cut(s)	488, 716
BsmI	GAATGC	3 cut(s)	1199, 1294, 2000
BsnI	GGCC	6 cut(s)	61, 197, 248, 510, 974, 2052
Bso31I	GGTCTC	2 cut(s)	54, 2183
BsoBI	CYCGRG	1 cut(s)	1987
Bsp1286I	GDGCHC	4 cut(s)	544, 645, 1693, 1749
Bsp1720I	GCTNAGC	1 cut(s)	1039
Bsp19I	CCATGG	2 cut(s)	243, 1806
BspACI	CCGC	8 cut(s)	249, 694, 1103, 1764, 1925, 2210, 2325, 2346
BspANI	GGCC	6 cut(s)	61, 197, 248, 510, 974, 2052
BspHI	TCATGA	1 cut(s)	1209
BspLI	GGNNCC	8 cut(s)	597, 642, 727, 760, 1003, 1231, 1812, 2202
BspMAI	CTGCAG	1 cut(s)	457
BspMI	ACCTGC	1 cut(s)	1385
BspPI	GGATC	7 cut(s)	678, 1211, 1224, 1237, 1282, 1322, 1469
BspT107I	GGYRCC	3 cut(s)	640, 725, 758
BspTNI	GGTCTC	2 cut(s)	54, 2183
BsrDI	GCAATG	1 cut(s)	1067
BsrFI	RCCGGY	1 cut(s)	2048
BsrI	ACTGG	7 cut(s)	154, 364, 416, 752, 1025, 1420, 2005
BssAI	RCCGGY	1 cut(s)	2048
BssECI	CCNNGG	4 cut(s)	243, 644, 1695, 1806
BssT1I	CCWWGG	2 cut(s)	243, 1806
Bst2UI	CCWGG	7 cut(s)	507, 646, 1697, 1815, 1878, 2137, 2172
Bst4CI	ACNGT	8 cut(s)	32, 581, 613, 1346, 1411, 1606, 1709, 1916
Bst6I	CTCTTC	2 cut(s)	1584, 2036
BstBAI	YACGTR	1 cut(s)	1282
BstDSI	CCRYGG	2 cut(s)	243, 1806
BstEII	GGTNACC	1 cut(s)	2123
BstF5I	GGATG	7 cut(s)	66, 420, 931, 1360, 1441, 1591, 2261
BstHHI	GCGC	2 cut(s)	210, 563
BstMAI	GTCTC	3 cut(s)	54, 179, 2183
BstMWI	GCNNNNNNNGC	7 cut(s)	216, 248, 567, 1111, 1120, 1196, 2021
BstNI	CCWGG	7 cut(s)	507, 646, 1697, 1815, 1878, 2137, 2172
BstNSI	RCATGY	1 cut(s)	1340
BstPI	GGTNACC	1 cut(s)	2123
BstSCI	CCNGG	7 cut(s)	505, 644, 1695, 1813, 1876, 2135, 2170
BstSFI	CTRYAG	2 cut(s)	6, 453
BstSLI	GKGCMC	2 cut(s)	645, 1749
BstV1I	GCAGC	3 cut(s)	467, 1153, 2024
BstV2I	GAAGAC	4 cut(s)	89, 135, 332, 1566
BstX2I	RGATCY	1 cut(s)	1229
BstXI	CCANNNNNNTGG	1 cut(s)	161
BstYI	RGATCY	1 cut(s)	1229
BsuI	GTATCC	1 cut(s)	1817
BsuRI	GGCC	6 cut(s)	61, 197, 248, 510, 974, 2052
BtgI	CCRYGG	2 cut(s)	243, 1806
BtrI	CACGTC	1 cut(s)	1945
BtsCI	GGATG	7 cut(s)	66, 420, 931, 1360, 1441, 1591, 2261
BtsI	GCAGTG	1 cut(s)	1863
BtsIMutI	CAGTG	4 cut(s)	586, 896, 1611, 1863
BveI	ACCTGC	1 cut(s)	1385
CciI	TCATGA	1 cut(s)	1209
CfoI	GCGC	2 cut(s)	210, 563
Cfr10I	RCCGGY	1 cut(s)	2048
Cfr13I	GGNCC	1 cut(s)	2051
CseI	GACGC	1 cut(s)	161
CsiI	ACCWGGT	1 cut(s)	2170
Csp6I	GTAC	7 cut(s)	272, 352, 551, 740, 1870, 1955, 2232
CspCI	CAANNNNNGTGG	2 cut(s)	2155, 2190
CviAII	CATG	8 cut(s)	244, 389, 512, 706, 1210, 1337, 1807, 2245
CviQI	GTAC	7 cut(s)	272, 352, 551, 740, 1870, 1955, 2232
DraI	TTTAAA	1 cut(s)	1048
DriI	GACNNNNNGTC	1 cut(s)	2253
EaeI	YGGCCR	2 cut(s)	246, 508
Eam1104I	CTCTTC	2 cut(s)	1584, 2036
Eam1105I	GACNNNNNGTC	1 cut(s)	2253
EarI	CTCTTC	2 cut(s)	1584, 2036
EciI	GGCGGA	1 cut(s)	1779
Ecl136II	GAGCTC	1 cut(s)	542
Eco130I	CCWWGG	2 cut(s)	243, 1806
Eco147I	AGGCCT	2 cut(s)	61, 197
Eco24I	GRGCYC	1 cut(s)	544
Eco31I	GGTCTC	2 cut(s)	54, 2183
Eco32I	GATATC	1 cut(s)	1786
Eco53kI	GAGCTC	1 cut(s)	542
Eco57I	CTGAAG	2 cut(s)	854, 2118
Eco88I	CYCGRG	1 cut(s)	1987
Eco91I	GGTNACC	1 cut(s)	2123
EcoICRI	GAGCTC	1 cut(s)	542
EcoO65I	GGTNACC	1 cut(s)	2123
EcoRI	GAATTC	3 cut(s)	1466, 1664, 1829
EcoRII	CCWGG	7 cut(s)	505, 644, 1695, 1813, 1876, 2135, 2170
EcoRV	GATATC	1 cut(s)	1786
EcoT14I	CCWWGG	2 cut(s)	243, 1806
EcoT22I	ATGCAT	1 cut(s)	1338
EcoT38I	GRGCYC	1 cut(s)	544
ErhI	CCWWGG	2 cut(s)	243, 1806
Esp3I	CGTCTC	1 cut(s)	179
FaeI	CATG	8 cut(s)	247, 392, 515, 709, 1213, 1340, 1810, 2248
FaqI	GGGAC	2 cut(s)	488, 716
FatI	CATG	8 cut(s)	243, 388, 511, 705, 1209, 1336, 1806, 2244
FauI	CCCGC	1 cut(s)	1918
FblI	GTMKAC	3 cut(s)	516, 1321, 1941
Fnu4HI	GCNGC	6 cut(s)	249, 456, 1167, 2013, 2325, 2346
FokI	GGATG	7 cut(s)	53, 427, 938, 1367, 1428, 1598, 2248
FriOI	GRGCYC	1 cut(s)	544
Fsp4HI	GCNGC	6 cut(s)	249, 456, 1167, 2013, 2325, 2346
FspBI	CTAG	7 cut(s)	950, 1014, 1328, 1895, 1958, 2016, 2283
GlaI	GCGC	2 cut(s)	209, 562
GluI	GCNGC	6 cut(s)	249, 456, 1167, 2013, 2325, 2346
GsaI	CCCAGC	3 cut(s)	83, 591, 1194
GsuI	CTGGAG	1 cut(s)	2119
HaeIII	GGCC	6 cut(s)	61, 197, 248, 510, 974, 2052
HapII	CCGG	1 cut(s)	2049
HgaI	GACGC	1 cut(s)	161
HhaI	GCGC	2 cut(s)	210, 563
Hin1II	CATG	8 cut(s)	247, 392, 515, 709, 1213, 1340, 1810, 2248
Hin6I	GCGC	2 cut(s)	208, 561
HinP1I	GCGC	2 cut(s)	208, 561
HincII	GTYRAC	4 cut(s)	517, 661, 1942, 1984
HindII	GTYRAC	4 cut(s)	517, 661, 1942, 1984
HinfI	GANTC	5 cut(s)	11, 166, 1248, 1985, 2192
HpaII	CCGG	1 cut(s)	2049
HphI	GGTGA	6 cut(s)	514, 1092, 1388, 1430, 1634, 2135
Hpy166II	GTNNAC	9 cut(s)	28, 517, 661, 1322, 1702, 1747, 1942, 1984, 2234
Hpy188I	TCNGA	9 cut(s)	20, 54, 291, 607, 865, 1602, 1796, 2030, 2313
Hpy8I	GTNNAC	9 cut(s)	28, 517, 661, 1322, 1702, 1747, 1942, 1984, 2234
Hpy99I	CGWCG	2 cut(s)	1943, 1946
HpyAV	CCTTC	5 cut(s)	386, 947, 1107, 1575, 1607
HpyCH4III	ACNGT	8 cut(s)	32, 581, 613, 1346, 1411, 1606, 1709, 1916
HpyCH4IV	ACGT	3 cut(s)	1281, 1459, 1944
HpyF10VI	GCNNNNNNNGC	7 cut(s)	216, 248, 567, 1111, 1120, 1196, 2021
HpySE526I	ACGT	3 cut(s)	1281, 1459, 1944
Hsp92II	CATG	8 cut(s)	247, 392, 515, 709, 1213, 1340, 1810, 2248
HspAI	GCGC	2 cut(s)	208, 561
KroI	GCCGGC	1 cut(s)	2048
KroNI	GCCGGC	1 cut(s)	2050
LmnI	GCTCC	6 cut(s)	418, 535, 1532, 1688, 1810, 2021
Lsp1109I	GCAGC	3 cut(s)	467, 1153, 2024
LweI	GCATC	7 cut(s)	307, 1066, 1123, 1450, 1639, 2262, 2270
MabI	ACCWGGT	1 cut(s)	2170
MaeI	CTAG	7 cut(s)	950, 1014, 1328, 1895, 1958, 2016, 2283
MaeII	ACGT	3 cut(s)	1281, 1459, 1944
MaeIII	GTNAC	8 cut(s)	712, 894, 1411, 1430, 1910, 2089, 2123, 2162
MfeI	CAATTG	1 cut(s)	1494
MflI	RGATCY	1 cut(s)	1229
MhlI	GDGCHC	4 cut(s)	544, 645, 1693, 1749
MlsI	TGGCCA	1 cut(s)	510
MluNI	TGGCCA	1 cut(s)	510
MlyI	GAGTC	2 cut(s)	20, 1979
MmeI	TCCRAC	3 cut(s)	207, 903, 1666
Mox20I	TGGCCA	1 cut(s)	510
Mph1103I	ATGCAT	1 cut(s)	1338
MroNI	GCCGGC	1 cut(s)	2048
MscI	TGGCCA	1 cut(s)	510
MseI	TTAA	8 cut(s)	489, 774, 981, 1047, 1359, 1485, 1545, 2130
MslI	CAYNNNNRTG	2 cut(s)	315, 710
Msp20I	TGGCCA	1 cut(s)	510
MspI	CCGG	1 cut(s)	2049
MspR9I	CCNGG	7 cut(s)	507, 646, 1697, 1815, 1878, 2137, 2172
MunI	CAATTG	1 cut(s)	1494
Mva1269I	GAATGC	3 cut(s)	1199, 1294, 2000
MvaI	CCWGG	7 cut(s)	507, 646, 1697, 1815, 1878, 2137, 2172
MwoI	GCNNNNNNNGC	7 cut(s)	216, 248, 567, 1111, 1120, 1196, 2021
NaeI	GCCGGC	1 cut(s)	2050
NcoI	CCATGG	2 cut(s)	243, 1806
NgoMIV	GCCGGC	1 cut(s)	2048
NlaIII	CATG	8 cut(s)	247, 392, 515, 709, 1213, 1340, 1810, 2248
NlaIV	GGNNCC	8 cut(s)	597, 642, 727, 760, 1003, 1231, 1812, 2202
NmuCI	GTSAC	5 cut(s)	712, 894, 1430, 2123, 2162
NsiI	ATGCAT	1 cut(s)	1338
NspI	RCATGY	1 cut(s)	1340
PaeI	GCATGC	1 cut(s)	1340
PaeR7I	CTCGAG	1 cut(s)	1987
PagI	TCATGA	1 cut(s)	1209
PceI	AGGCCT	2 cut(s)	61, 197
PcsI	WCGNNNNNNNCGW	2 cut(s)	106, 1080
PctI	GAATGC	3 cut(s)	1199, 1294, 2000
PdiI	GCCGGC	1 cut(s)	2050
PfeI	GAWTC	3 cut(s)	166, 1248, 2192
PflFI	GACNNNGTC	1 cut(s)	1770
PflMI	CCANNNNNTGG	1 cut(s)	1190
PfoI	TCCNGGA	1 cut(s)	2135
PkrI	GCNGC	6 cut(s)	250, 457, 1168, 2014, 2326, 2347
PleI	GAGTC	2 cut(s)	19, 1979
PpsI	GAGTC	2 cut(s)	19, 1979
Ppu21I	YACGTR	1 cut(s)	1282
Psp124BI	GAGCTC	1 cut(s)	544
Psp6I	CCWGG	7 cut(s)	505, 644, 1695, 1813, 1876, 2135, 2170
PspEI	GGTNACC	1 cut(s)	2123
PspFI	CCCAGC	3 cut(s)	79, 587, 1190
PspGI	CCWGG	7 cut(s)	505, 644, 1695, 1813, 1876, 2135, 2170
PspN4I	GGNNCC	8 cut(s)	597, 642, 727, 760, 1003, 1231, 1812, 2202
PspPI	GGNCC	1 cut(s)	2051
PspXI	VCTCGAGB	1 cut(s)	1987
PstI	CTGCAG	1 cut(s)	457
PsuI	RGATCY	1 cut(s)	1229
PsyI	GACNNNGTC	1 cut(s)	1770
RsaI	GTAC	7 cut(s)	273, 353, 552, 741, 1871, 1956, 2233
RsaNI	GTAC	7 cut(s)	272, 352, 551, 740, 1870, 1955, 2232
RseI	CAYNNNNRTG	2 cut(s)	315, 710
SacI	GAGCTC	1 cut(s)	544
SalI	GTCGAC	2 cut(s)	515, 1940
SaqAI	TTAA	8 cut(s)	489, 774, 981, 1047, 1359, 1485, 1545, 2130
SatI	GCNGC	6 cut(s)	249, 456, 1167, 2013, 2325, 2346
Sau96I	GGNCC	1 cut(s)	2051
SchI	GAGTC	2 cut(s)	20, 1979
ScrFI	CCNGG	7 cut(s)	507, 646, 1697, 1815, 1878, 2137, 2172
SduI	GDGCHC	4 cut(s)	544, 645, 1693, 1749
SexAI	ACCWGGT	1 cut(s)	2170
SfaNI	GCATC	7 cut(s)	307, 1066, 1123, 1450, 1639, 2262, 2270
SfcI	CTRYAG	2 cut(s)	6, 453
Sfr274I	CTCGAG	1 cut(s)	1987
SgrDI	CGTCGACG	1 cut(s)	1940
SlaI	CTCGAG	1 cut(s)	1987
SmiMI	CAYNNNNRTG	2 cut(s)	315, 710
SmlI	CTYRAG	5 cut(s)	1579, 1634, 1655, 1987, 2180
SmoI	CTYRAG	5 cut(s)	1579, 1634, 1655, 1987, 2180
SpeI	ACTAGT	1 cut(s)	1957
SphI	GCATGC	1 cut(s)	1340
SseBI	AGGCCT	2 cut(s)	61, 197
SsiI	CCGC	8 cut(s)	249, 694, 1103, 1764, 1925, 2210, 2325, 2346
SspI	AATATT	1 cut(s)	295
SspMI	CTAG	7 cut(s)	950, 1014, 1328, 1895, 1958, 2016, 2283
SstI	GAGCTC	1 cut(s)	544
StuI	AGGCCT	2 cut(s)	61, 197
StyD4I	CCNGG	7 cut(s)	505, 644, 1695, 1813, 1876, 2135, 2170
StyI	CCWWGG	2 cut(s)	243, 1806
TaaI	ACNGT	8 cut(s)	32, 581, 613, 1346, 1411, 1606, 1709, 1916
TaiI	ACGT	3 cut(s)	1284, 1462, 1947
TaqI	TCGA	7 cut(s)	516, 528, 1074, 1611, 1674, 1941, 1988
TatI	WGTACW	5 cut(s)	351, 739, 1869, 1954, 2231
TauI	GCSGC	3 cut(s)	251, 2327, 2348
TfiI	GAWTC	3 cut(s)	166, 1248, 2192
Tru1I	TTAA	8 cut(s)	489, 774, 981, 1047, 1359, 1485, 1545, 2130
Tru9I	TTAA	8 cut(s)	489, 774, 981, 1047, 1359, 1485, 1545, 2130
TscAI	CASTG	4 cut(s)	586, 903, 1611, 1863
TseFI	GTSAC	5 cut(s)	712, 894, 1430, 2123, 2162
TseI	GCWGC	3 cut(s)	455, 1166, 2012
Tsp45I	GTSAC	5 cut(s)	712, 894, 1430, 2123, 2162
TspDTI	ATGAA	7 cut(s)	405, 945, 1194, 1602, 1901, 2054, 2090
TspGWI	ACGGA	1 cut(s)	358
TspRI	CASTG	4 cut(s)	586, 903, 1611, 1863
Tth111I	GACNNNGTC	1 cut(s)	1770
Van91I	CCANNNNNTGG	1 cut(s)	1190
VneI	GTGCAC	1 cut(s)	1745
XapI	RAATTY	5 cut(s)	718, 747, 1466, 1664, 1829
XbaI	TCTAGA	2 cut(s)	949, 1327
XceI	RCATGY	1 cut(s)	1340
XcmI	CCANNNNNNNNNTGG	1 cut(s)	919
XhoI	CTCGAG	1 cut(s)	1987
XmiI	GTMKAC	3 cut(s)	516, 1321, 1941
XspI	CTAG	7 cut(s)	950, 1014, 1328, 1895, 1958, 2016, 2283
Zsp2I	ATGCAT	1 cut(s)	1338

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.