No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37300 AT2G37300 AT2G37300 AT2G37300 AT2G37300 AT2G37300 |
| fragaria_vesca | FvH4_6g14910 FvH4_6g14910 FvH4_6g14910 |
| malus_domestica | MD04G1111000.v1.1 MD12G1129800.v1.1 |
| prunus_persica | Prupe.6G245100_v2.0.a1 |
| pyrus_communis | pycom04g10420 pycom12g12600 |
| rosa_chinensis | RchiOBHm_Chr3g0468111 |
| rosa_laevigata | RLG00000024448 |
| rosa_multiflora | Rmu_sc0003659.1_g000013 |
| rosa_roxburghii | Rroxscaffold_6G00413020 |
| rosa_rugosa | Rorug03G0092800 Rorug03G0092900 Rorug03G0093000 Rorug03G0093100 Rorug03G0093200 Rorug03G0093200 Rorug03G0093200 |
| rosa_samantha | Rh3AG141200 Rh3BG162700 Rh3CG162600 Rh3DG163200 |
| rosa_wichuraiana | Rw3G013340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 309, 322, 539 |
| AcuI | CTGAAG | 3 cut(s) | 221, 459, 561 |
| AfaI | GTAC | 3 cut(s) | 289, 430, 619 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 510 |
| AgsI | TTSAA | 4 cut(s) | 235, 248, 256, 557 |
| AluBI | AGCT | 8 cut(s) | 8, 116, 181, 223, 244, 395, 420, 489 |
| AluI | AGCT | 8 cut(s) | 8, 116, 181, 223, 244, 395, 420, 489 |
| Alw26I | GTCTC | 1 cut(s) | 88 |
| AlwI | GGATC | 3 cut(s) | 309, 322, 539 |
| ApeKI | GCWGC | 2 cut(s) | 178, 392 |
| BamHI | GGATCC | 1 cut(s) | 314 |
| BbvI | GCAGC | 2 cut(s) | 190, 404 |
| BccI | CCATC | 3 cut(s) | 20, 43, 53 |
| BcoDI | GTCTC | 1 cut(s) | 88 |
| BfaI | CTAG | 2 cut(s) | 120, 480 |
| BfmI | CTRYAG | 1 cut(s) | 170 |
| BisI | GCNGC | 2 cut(s) | 179, 393 |
| BlsI | GCNGC | 2 cut(s) | 180, 394 |
| BmcAI | AGTACT | 1 cut(s) | 430 |
| BmiI | GGNNCC | 2 cut(s) | 316, 472 |
| BmsI | GCATC | 1 cut(s) | 127 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 510 |
| Bse1I | ACTGG | 3 cut(s) | 19, 474, 594 |
| BseGI | GGATG | 2 cut(s) | 142, 322 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 510 |
| BseMII | CTCAG | 2 cut(s) | 100, 402 |
| BseNI | ACTGG | 3 cut(s) | 19, 474, 594 |
| BseXI | GCAGC | 2 cut(s) | 190, 404 |
| BseYI | CCCAGC | 1 cut(s) | 485 |
| BslFI | GGGAC | 1 cut(s) | 468 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 510 |
| BsmAI | GTCTC | 1 cut(s) | 88 |
| BsmFI | GGGAC | 1 cut(s) | 468 |
| Bsp1407I | TGTACA | 1 cut(s) | 287 |
| Bsp143I | GATC | 3 cut(s) | 192, 314, 544 |
| BspCNI | CTCAG | 2 cut(s) | 99, 403 |
| BspLI | GGNNCC | 2 cut(s) | 316, 472 |
| BspPI | GGATC | 3 cut(s) | 309, 322, 539 |
| BsrGI | TGTACA | 1 cut(s) | 287 |
| BsrI | ACTGG | 3 cut(s) | 19, 474, 594 |
| BssMI | GATC | 3 cut(s) | 192, 314, 544 |
| Bst6I | CTCTTC | 1 cut(s) | 183 |
| BstAUI | TGTACA | 1 cut(s) | 287 |
| BstC8I | GCNNGC | 2 cut(s) | 102, 114 |
| BstDEI | CTNAG | 4 cut(s) | 86, 411, 490, 621 |
| BstF5I | GGATG | 2 cut(s) | 142, 322 |
| BstKTI | GATC | 3 cut(s) | 195, 317, 547 |
| BstMAI | GTCTC | 1 cut(s) | 88 |
| BstMBI | GATC | 3 cut(s) | 192, 314, 544 |
| BstSFI | CTRYAG | 1 cut(s) | 170 |
| BstV1I | GCAGC | 2 cut(s) | 190, 404 |
| BstX2I | RGATCY | 2 cut(s) | 314, 544 |
| BstYI | RGATCY | 2 cut(s) | 314, 544 |
| BtsCI | GGATG | 2 cut(s) | 142, 322 |
| BtsIMutI | CAGTG | 1 cut(s) | 435 |
| Cac8I | GCNNGC | 2 cut(s) | 102, 114 |
| Csp6I | GTAC | 3 cut(s) | 288, 429, 618 |
| CviAII | CATG | 2 cut(s) | 19, 33 |
| CviJI | RGCY | 9 cut(s) | 8, 116, 181, 223, 244, 341, 395, 420, 489 |
| CviKI_1 | RGCY | 9 cut(s) | 8, 116, 181, 223, 244, 341, 395, 420, 489 |
| CviQI | GTAC | 3 cut(s) | 288, 429, 618 |
| DdeI | CTNAG | 4 cut(s) | 86, 411, 490, 621 |
| DpnI | GATC | 3 cut(s) | 194, 316, 546 |
| DpnII | GATC | 3 cut(s) | 192, 314, 544 |
| Eam1104I | CTCTTC | 1 cut(s) | 183 |
| EarI | CTCTTC | 1 cut(s) | 183 |
| Eco57I | CTGAAG | 3 cut(s) | 221, 459, 561 |
| FaeI | CATG | 2 cut(s) | 22, 36 |
| FaiI | YATR | 6 cut(s) | 20, 34, 336, 459, 534, 573 |
| FaqI | GGGAC | 1 cut(s) | 468 |
| FatI | CATG | 2 cut(s) | 18, 32 |
| Fnu4HI | GCNGC | 2 cut(s) | 179, 393 |
| FokI | GGATG | 2 cut(s) | 149, 309 |
| Fsp4HI | GCNGC | 2 cut(s) | 179, 393 |
| FspBI | CTAG | 2 cut(s) | 120, 480 |
| GluI | GCNGC | 2 cut(s) | 179, 393 |
| GsaI | CCCAGC | 1 cut(s) | 489 |
| Hin1II | CATG | 2 cut(s) | 22, 36 |
| HindIII | AAGCTT | 2 cut(s) | 114, 242 |
| HinfI | GANTC | 4 cut(s) | 248, 359, 377, 398 |
| Hpy166II | GTNNAC | 1 cut(s) | 290 |
| Hpy188I | TCNGA | 5 cut(s) | 89, 268, 364, 412, 541 |
| Hpy188III | TCNNGA | 4 cut(s) | 312, 326, 381, 548 |
| Hpy8I | GTNNAC | 1 cut(s) | 290 |
| HpyAV | CCTTC | 2 cut(s) | 47, 196 |
| HpyCH4V | TGCA | 4 cut(s) | 128, 140, 356, 392 |
| HpyF3I | CTNAG | 4 cut(s) | 86, 411, 490, 621 |
| Hsp92II | CATG | 2 cut(s) | 22, 36 |
| Kzo9I | GATC | 3 cut(s) | 192, 314, 544 |
| Lsp1109I | GCAGC | 2 cut(s) | 190, 404 |
| LweI | GCATC | 1 cut(s) | 127 |
| MaeI | CTAG | 2 cut(s) | 120, 480 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MalI | GATC | 3 cut(s) | 194, 316, 546 |
| MboI | GATC | 3 cut(s) | 192, 314, 544 |
| MflI | RGATCY | 2 cut(s) | 314, 544 |
| MluCI | AATT | 1 cut(s) | 582 |
| MlyI | GAGTC | 2 cut(s) | 368, 392 |
| MnlI | CCTC | 6 cut(s) | 63, 83, 95, 102, 127, 274 |
| MseI | TTAA | 1 cut(s) | 585 |
| MspA1I | CMGCKG | 1 cut(s) | 395 |
| NdeII | GATC | 3 cut(s) | 192, 314, 544 |
| NlaIII | CATG | 2 cut(s) | 22, 36 |
| NlaIV | GGNNCC | 2 cut(s) | 316, 472 |
| NmuCI | GTSAC | 1 cut(s) | 38 |
| PfeI | GAWTC | 2 cut(s) | 248, 377 |
| PkrI | GCNGC | 2 cut(s) | 180, 394 |
| PleI | GAGTC | 2 cut(s) | 367, 392 |
| PpsI | GAGTC | 2 cut(s) | 367, 392 |
| PspFI | CCCAGC | 1 cut(s) | 485 |
| PspN4I | GGNNCC | 2 cut(s) | 316, 472 |
| PsuI | RGATCY | 2 cut(s) | 314, 544 |
| PvuII | CAGCTG | 1 cut(s) | 395 |
| RsaI | GTAC | 3 cut(s) | 289, 430, 619 |
| RsaNI | GTAC | 3 cut(s) | 288, 429, 618 |
| SaqAI | TTAA | 1 cut(s) | 585 |
| SatI | GCNGC | 2 cut(s) | 179, 393 |
| Sau3AI | GATC | 3 cut(s) | 192, 314, 544 |
| ScaI | AGTACT | 1 cut(s) | 430 |
| SchI | GAGTC | 2 cut(s) | 368, 392 |
| SfaNI | GCATC | 1 cut(s) | 127 |
| SfcI | CTRYAG | 1 cut(s) | 170 |
| Sse9I | AATT | 1 cut(s) | 582 |
| SspI | AATATT | 2 cut(s) | 230, 259 |
| SspMI | CTAG | 2 cut(s) | 120, 480 |
| TasI | AATT | 1 cut(s) | 582 |
| TatI | WGTACW | 3 cut(s) | 287, 428, 617 |
| TfiI | GAWTC | 2 cut(s) | 248, 377 |
| Tru1I | TTAA | 1 cut(s) | 585 |
| Tru9I | TTAA | 1 cut(s) | 585 |
| TscAI | CASTG | 1 cut(s) | 442 |
| TseFI | GTSAC | 1 cut(s) | 38 |
| TseI | GCWGC | 2 cut(s) | 178, 392 |
| Tsp45I | GTSAC | 1 cut(s) | 38 |
| TspDTI | ATGAA | 1 cut(s) | 297 |
| TspRI | CASTG | 1 cut(s) | 442 |
| XspI | CTAG | 2 cut(s) | 120, 480 |
| ZrmI | AGTACT | 1 cut(s) | 430 |