No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G37300 AT2G37300 AT2G37300 AT2G37300 AT2G37300 AT2G37300 |
| fragaria_vesca | FvH4_6g14910 FvH4_6g14910 FvH4_6g14910 |
| malus_domestica | MD04G1111000.v1.1 MD12G1129800.v1.1 |
| prunus_persica | Prupe.6G245100_v2.0.a1 |
| pyrus_communis | pycom04g10420 pycom12g12600 |
| rosa_chinensis | RchiOBHm_Chr3g0468111 |
| rosa_laevigata | RLG00000024448 |
| rosa_multiflora | Rmu_sc0003659.1_g000013 |
| rosa_roxburghii | Rroxscaffold_6G00413020 |
| rosa_rugosa | Rorug03G0092800 Rorug03G0092900 Rorug03G0093000 Rorug03G0093100 Rorug03G0093200 Rorug03G0093200 Rorug03G0093200 |
| rosa_samantha | Rh3AG141200 Rh3BG162700 Rh3CG162600 Rh3DG163200 |
| rosa_wichuraiana | Rw3G013340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 613 |
| AcoI | YGGCCR | 1 cut(s) | 147 |
| AcsI | RAATTY | 3 cut(s) | 224, 478, 530 |
| AcuI | CTGAAG | 2 cut(s) | 492, 585 |
| AfaI | GTAC | 3 cut(s) | 267, 334, 496 |
| AgsI | TTSAA | 9 cut(s) | 117, 199, 232, 245, 253, 275, 339, 483, 573 |
| AhlI | ACTAGT | 1 cut(s) | 497 |
| AluBI | AGCT | 8 cut(s) | 113, 166, 209, 220, 241, 342, 525, 628 |
| AluI | AGCT | 8 cut(s) | 113, 166, 209, 220, 241, 342, 525, 628 |
| Alw26I | GTCTC | 2 cut(s) | 100, 182 |
| Ama87I | CYCGRG | 1 cut(s) | 550 |
| AoxI | GGCC | 1 cut(s) | 147 |
| ApoI | RAATTY | 3 cut(s) | 224, 478, 530 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 484, 516 |
| AsuHPI | GGTGA | 1 cut(s) | 593 |
| AvaI | CYCGRG | 1 cut(s) | 550 |
| BalI | TGGCCA | 1 cut(s) | 149 |
| BanI | GGYRCC | 1 cut(s) | 613 |
| BanII | GRGCYC | 1 cut(s) | 369 |
| BbsI | GAAGAC | 3 cut(s) | 97, 239, 363 |
| BccI | CCATC | 1 cut(s) | 17 |
| BclI | TGATCA | 1 cut(s) | 583 |
| BcoDI | GTCTC | 2 cut(s) | 100, 182 |
| BcuI | ACTAGT | 1 cut(s) | 497 |
| BfaI | CTAG | 4 cut(s) | 12, 315, 498, 522 |
| BfmI | CTRYAG | 1 cut(s) | 167 |
| BmcAI | AGTACT | 2 cut(s) | 334, 496 |
| BmeT110I | CYCGRG | 1 cut(s) | 550 |
| BmiI | GGNNCC | 1 cut(s) | 615 |
| BmsI | GCATC | 1 cut(s) | 124 |
| BpiI | GAAGAC | 3 cut(s) | 97, 239, 363 |
| BsaJI | CCNNGG | 1 cut(s) | 144 |
| Bse1I | ACTGG | 4 cut(s) | 102, 269, 408, 510 |
| Bse3DI | GCAATG | 1 cut(s) | 617 |
| BseDI | CCNNGG | 1 cut(s) | 144 |
| BseGI | GGATG | 2 cut(s) | 139, 404 |
| BseMI | GCAATG | 1 cut(s) | 617 |
| BseMII | CTCAG | 2 cut(s) | 411, 432 |
| BseNI | ACTGG | 4 cut(s) | 102, 269, 408, 510 |
| BshFI | GGCC | 1 cut(s) | 149 |
| BshNI | GGYRCC | 1 cut(s) | 613 |
| BsiHKCI | CYCGRG | 1 cut(s) | 550 |
| BsmAI | GTCTC | 2 cut(s) | 100, 182 |
| BsmBI | CGTCTC | 1 cut(s) | 182 |
| BsnI | GGCC | 1 cut(s) | 149 |
| BsoBI | CYCGRG | 1 cut(s) | 550 |
| Bsp1286I | GDGCHC | 1 cut(s) | 369 |
| Bsp143I | GATC | 2 cut(s) | 460, 583 |
| Bsp19I | CCATGG | 1 cut(s) | 144 |
| BspANI | GGCC | 1 cut(s) | 149 |
| BspCNI | CTCAG | 2 cut(s) | 410, 433 |
| BspHI | TCATGA | 1 cut(s) | 451 |
| BspLI | GGNNCC | 1 cut(s) | 615 |
| BspT107I | GGYRCC | 1 cut(s) | 613 |
| BsrDI | GCAATG | 1 cut(s) | 617 |
| BsrI | ACTGG | 4 cut(s) | 102, 269, 408, 510 |
| BssECI | CCNNGG | 1 cut(s) | 144 |
| BssMI | GATC | 2 cut(s) | 460, 583 |
| BssT1I | CCWWGG | 1 cut(s) | 144 |
| Bst4CI | ACNGT | 2 cut(s) | 285, 379 |
| Bst6I | CTCTTC | 1 cut(s) | 180 |
| BstDEI | CTNAG | 5 cut(s) | 83, 397, 441, 526, 643 |
| BstDSI | CCRYGG | 1 cut(s) | 144 |
| BstF5I | GGATG | 2 cut(s) | 139, 404 |
| BstKTI | GATC | 2 cut(s) | 463, 586 |
| BstMAI | GTCTC | 2 cut(s) | 100, 182 |
| BstMBI | GATC | 2 cut(s) | 460, 583 |
| BstSFI | CTRYAG | 1 cut(s) | 167 |
| BstV2I | GAAGAC | 3 cut(s) | 97, 239, 363 |
| BsuRI | GGCC | 1 cut(s) | 149 |
| BtgI | CCRYGG | 1 cut(s) | 144 |
| BtsCI | GGATG | 2 cut(s) | 139, 404 |
| BtsIMutI | CAGTG | 1 cut(s) | 468 |
| CciI | TCATGA | 1 cut(s) | 451 |
| Csp6I | GTAC | 3 cut(s) | 266, 333, 495 |
| CviAII | CATG | 2 cut(s) | 145, 452 |
| CviQI | GTAC | 3 cut(s) | 266, 333, 495 |
| DdeI | CTNAG | 5 cut(s) | 83, 397, 441, 526, 643 |
| DpnI | GATC | 2 cut(s) | 462, 585 |
| DpnII | GATC | 2 cut(s) | 460, 583 |
| EaeI | YGGCCR | 1 cut(s) | 147 |
| Eam1104I | CTCTTC | 1 cut(s) | 180 |
| EarI | CTCTTC | 1 cut(s) | 180 |
| Eco130I | CCWWGG | 1 cut(s) | 144 |
| Eco24I | GRGCYC | 1 cut(s) | 369 |
| Eco57I | CTGAAG | 2 cut(s) | 492, 585 |
| Eco88I | CYCGRG | 1 cut(s) | 550 |
| EcoT14I | CCWWGG | 1 cut(s) | 144 |
| EcoT38I | GRGCYC | 1 cut(s) | 369 |
| ErhI | CCWWGG | 1 cut(s) | 144 |
| Esp3I | CGTCTC | 1 cut(s) | 182 |
| FaeI | CATG | 2 cut(s) | 148, 455 |
| FaiI | YATR | 6 cut(s) | 65, 146, 453, 558, 588, 597 |
| FatI | CATG | 2 cut(s) | 144, 451 |
| FbaI | TGATCA | 1 cut(s) | 583 |
| FokI | GGATG | 2 cut(s) | 146, 391 |
| FriOI | GRGCYC | 1 cut(s) | 369 |
| FspBI | CTAG | 4 cut(s) | 12, 315, 498, 522 |
| HaeIII | GGCC | 1 cut(s) | 149 |
| Hin1II | CATG | 2 cut(s) | 148, 455 |
| HindIII | AAGCTT | 2 cut(s) | 111, 239 |
| HinfI | GANTC | 5 cut(s) | 140, 245, 275, 386, 569 |
| HphI | GGTGA | 1 cut(s) | 593 |
| Hpy166II | GTNNAC | 1 cut(s) | 432 |
| Hpy188I | TCNGA | 4 cut(s) | 280, 298, 442, 565 |
| Hpy188III | TCNNGA | 4 cut(s) | 229, 315, 399, 452 |
| Hpy8I | GTNNAC | 1 cut(s) | 432 |
| HpyAV | CCTTC | 4 cut(s) | 44, 267, 312, 546 |
| HpyCH4III | ACNGT | 2 cut(s) | 285, 379 |
| HpyCH4V | TGCA | 2 cut(s) | 137, 622 |
| HpyF3I | CTNAG | 5 cut(s) | 83, 397, 441, 526, 643 |
| Hsp92II | CATG | 2 cut(s) | 148, 455 |
| Ksp22I | TGATCA | 1 cut(s) | 583 |
| Kzo9I | GATC | 2 cut(s) | 460, 583 |
| LmnI | GCTCC | 1 cut(s) | 347 |
| LweI | GCATC | 1 cut(s) | 124 |
| MaeI | CTAG | 4 cut(s) | 12, 315, 498, 522 |
| MaeIII | GTNAC | 1 cut(s) | 646 |
| MalI | GATC | 2 cut(s) | 462, 585 |
| MboI | GATC | 2 cut(s) | 460, 583 |
| MboII | GAAGA | 9 cut(s) | 32, 102, 197, 211, 244, 252, 368, 485, 578 |
| MhlI | GDGCHC | 1 cut(s) | 369 |
| MlsI | TGGCCA | 1 cut(s) | 149 |
| MluCI | AATT | 7 cut(s) | 29, 194, 224, 478, 530, 600, 652 |
| MluNI | TGGCCA | 1 cut(s) | 149 |
| MlyI | GAGTC | 1 cut(s) | 380 |
| MnlI | CCTC | 5 cut(s) | 52, 60, 80, 124, 304 |
| Mox20I | TGGCCA | 1 cut(s) | 149 |
| MscI | TGGCCA | 1 cut(s) | 149 |
| MseI | TTAA | 1 cut(s) | 632 |
| MslI | CAYNNNNRTG | 2 cut(s) | 76, 456 |
| Msp20I | TGGCCA | 1 cut(s) | 149 |
| NcoI | CCATGG | 1 cut(s) | 144 |
| NdeII | GATC | 2 cut(s) | 460, 583 |
| NlaIII | CATG | 2 cut(s) | 148, 455 |
| NlaIV | GGNNCC | 1 cut(s) | 615 |
| PagI | TCATGA | 1 cut(s) | 451 |
| PfeI | GAWTC | 4 cut(s) | 140, 245, 275, 569 |
| PleI | GAGTC | 1 cut(s) | 380 |
| PpsI | GAGTC | 1 cut(s) | 380 |
| PspN4I | GGNNCC | 1 cut(s) | 615 |
| RsaI | GTAC | 3 cut(s) | 267, 334, 496 |
| RsaNI | GTAC | 3 cut(s) | 266, 333, 495 |
| RseI | CAYNNNNRTG | 2 cut(s) | 76, 456 |
| SaqAI | TTAA | 1 cut(s) | 632 |
| Sau3AI | GATC | 2 cut(s) | 460, 583 |
| ScaI | AGTACT | 2 cut(s) | 334, 496 |
| SchI | GAGTC | 1 cut(s) | 380 |
| SduI | GDGCHC | 1 cut(s) | 369 |
| SfaNI | GCATC | 1 cut(s) | 124 |
| SfcI | CTRYAG | 1 cut(s) | 167 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 76, 456 |
| SpeI | ACTAGT | 1 cut(s) | 497 |
| Sse9I | AATT | 7 cut(s) | 29, 194, 224, 478, 530, 600, 652 |
| SspMI | CTAG | 4 cut(s) | 12, 315, 498, 522 |
| StyI | CCWWGG | 1 cut(s) | 144 |
| TaaI | ACNGT | 2 cut(s) | 285, 379 |
| TasI | AATT | 7 cut(s) | 29, 194, 224, 478, 530, 600, 652 |
| TatI | WGTACW | 2 cut(s) | 332, 494 |
| TfiI | GAWTC | 4 cut(s) | 140, 245, 275, 569 |
| Tru1I | TTAA | 1 cut(s) | 632 |
| Tru9I | TTAA | 1 cut(s) | 632 |
| TscAI | CASTG | 1 cut(s) | 475 |
| TspRI | CASTG | 1 cut(s) | 475 |
| XapI | RAATTY | 3 cut(s) | 224, 478, 530 |
| XbaI | TCTAGA | 1 cut(s) | 314 |
| XspI | CTAG | 4 cut(s) | 12, 315, 498, 522 |
| ZrmI | AGTACT | 2 cut(s) | 334, 496 |