Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0013274

Physical Location & Seq

Genomic Coordinates Reverse (-)

16247987 .. 16250110

Gene Structure 2124 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g13290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2124 bp

ATGAATCCCAGCGGAGAAGCAGCAGCACCGCCGCCTCCAACGCTACAACCGCCGCAGCCGCCTCAGGCCCAACGACCCTCTACATCCTGCGCCCGTCACCCGGAAGAGCATTTCACGGGCTTCTGCCCCTCATGCCTCTGCGAACGCCTTGCCGAGTTGGAACCTTCAACAACCTCTTCTTCCTCTTCAATTTCTCGAAAGCCCCCTACTTCCTCCACCGCCGCAGCCGCGCTTAAGGCCATTTTCAAGCCCCCCATTGGCGGTGGTGGGGCCTCCTCTTCCAATAAAAATCGACCCACCTCATTTTTCCCGGAGCTCCGACGAACCAAGTCTTTCTCTGCCTCTAAAAACGAGGGCTTCTCTGGCGTGTTTGAGCCGCAGAGGAAGTCCTGCGACGTTCGGAACACTCTGTGGACACTCTTTCACCAAGACGACGGCCGCAATCCCAACAAGAAGGAAGCACCGCCCACTGACGTTGAGGTCGAGACCCGGAATTTGGGTGGGTCTTCTTCCAGCTTCCGGGGTCCGGTCATCGAGGCCAAGGAGGAAGAGGAGGACAAAGCCGAAGAGGACGAGAACCAGTTTAGTGGCGGCGAGGACTTCGGAATTGAAATTTGTGAGGATGCAATTGTCCCAAATGTAACAGAAGACAGAGTTCCTGAAATCGTAGAGGAGGAGGAGGAAGACTTTCAACCACCGCAGCCAGTGCCGGAGCAATTCGAAGAAGAGGAGTTGAAACCAATGAAAGATCACATAGATCTTGATTCTCAGACGAAGAAGCGAGACCTTAAGGAGATTGCGGGAAGCTTCTGGTCAGCAGCTTCGGTTTTCAGCAAGAAATTACAGAAATGGAGGCAGAAACAAAAGCTGAAGAAGCGGCGGAACGGCGGCGGATCGGCCACATTGCTGGTGGAGAAGCCAATCGGGAGACAGTTCAGAGAAACTCAGTCGGAGATTGCCGATTACGGCTTCGGCCGGCGCTCCTGCGACACGGATCCGAGGTTTTCGCTAGACGTGGGTCGGATGTCGCTGGACGCGGGTCGGATGTCATTGGACGCGGGTCGGATATCGTTCGACAACCCGAGATACTCCTTTGACGAGCCTCGGGCCTCGTGGGACGGGTACCTCATCGGAAGAACGTTTCCGAGGATGCCAACGATGCTCTCGGTGGTGGAGGACGCTCCAGTGGTCCACGTGGCGAGATGCGACGCTGAGATTCCGGTGGAGGAGCCGCCTAAGAATTCGATTGAAGAGGAAACGGTTCCGGGCGGGTCGGCCCAGACCCGGGACTACTATTCGGACTCCTCTTCTCGGCGGAGGAAGAGCCTCGACCGGTCCAACTCCATTAGGAAGACTGCGGCGGCGGTGGTGGCGGAGATTGATGAAATGAAGTCGGTTTCGAATGCCAATGCCAACGCCAAGGTGTCGCCCACGACTGTTCCTGATGACAGAGATCTGAGGGAATTTTACAACTCGAATTCTCTGAGGGATGACTGCTCTGAGAGCTTTGATATGGCGTCGTTTCGGGGCGGCGGAGATACGGGTTCGGTGGTGGGAAATGGGGAGAGGAATAAAGGGTGTAAAAAGTCTAGGAGGTGGGGCAAGGCGTGGAATATATGGAGTTTTATACACAGGAGGGGTGGGAACAAAGATGAGGACGATGATAGGTATAGTAGTGATCGATCAAACGGCGTGGAGCGGTCTTATTCGGAGTCGTGGCCGGAGCTCAGAGGCGGCAGCGGTGGTGGTGAGAGGAATGGGGAAGCCAAGGGCTTTAACCCCAAGATTATGAGGAGTAATAGTAGTGCTAGTTGGAGGAATGGTTCTCATGGGTATGGCGGTTTCGGTGGCGGTGCATTTGGGAGCATGAGGAAGAGCAATGGCGGGGTTCCTGTCGTGGAGGCAAACGGGTTTGGAAATGGGACTGCCGGGAGGAAGAAAAAAGAGGATCAGGTTGTGCTGGAACGGAACCGGAGCGCGAGGTATTCTCCGAACCACATTGAAAACGGAATGCTGAGGTTTTATTTGACTCCGATGAGGAGCAGCTGGAGGAGCGGCGGAGTCGGGAAAAGCAGGTCCAGCCATGCTCATTCGATTGCCAGAAGCGTACTGAAATTGTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009965 GO:0010016 GO:0010051 GO:0010087 GO:0010088 GO:0010154 GO:0010232 GO:0010233 GO:0010588 GO:0016020 GO:0016324 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0044425 GO:0044459 GO:0044464 GO:0045177 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0061458 GO:0071944 GO:0090698 GO:0098590 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF740

Protein Analysis

708

Amino Acids

77.99

Weight (kDa)

7.15

Isoelectric Point (pI)

67.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF740	PF05340	17 - 350	3.9e-128	Protein of unknown function (DUF740)
DUF740	PF05340	348 - 683	1.3e-130	Protein of unknown function (DUF740)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38070
fragaria_vesca	FvH4_6g12000
malus_domestica	MD04G1147100.v1.1 MD12G1160400.v1.1
prunus_persica	Prupe.6G270900_v2.0.a1
pyrus_communis	pycom04g13290 pycom12g15220
rosa_chinensis	RchiOBHm_Chr3g0463831
rosa_laevigata	RLG00000024753
rosa_multiflora	Rmu_sc0004796.1_g000009
rosa_roxburghii	Rroxscaffold_6G00399380 Rroxscaffold_6G00416260
rosa_rugosa	Rorug03G0068100
rosa_samantha	Rh3AG125200 Rh3BG129500 Rh3CG132000 Rh3DG130500
rosa_wichuraiana	Rw3G010580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	479
Acc36I	ACCTGC	1 cut(s)	2064
Acc65I	GGTACC	1 cut(s)	1122
AccB1I	GGYRCC	1 cut(s)	1122
AccBSI	CCGCTC	2 cut(s)	1699, 2055
AccII	CGCG	4 cut(s)	230, 1037, 1058, 1979
AclI	AACGTT	1 cut(s)	1139
AclWI	GGATC	4 cut(s)	901, 989, 1002, 1956
AcoI	YGGCCR	4 cut(s)	436, 897, 973, 1718
AcsI	RAATTY	5 cut(s)	493, 612, 1240, 1463, 1477
AcuI	CTGAAG	1 cut(s)	890
AcvI	CACGTG	1 cut(s)	1195
AcyI	GRCGYC	1 cut(s)	1517
AdeI	CACNNNGTG	1 cut(s)	411
AfaI	GTAC	2 cut(s)	1124, 2109
AfiI	CCNNNNNNNGG	9 cut(s)	100, 257, 260, 496, 519, 526, 1284, 1285, 1311
AflII	CTTAAG	2 cut(s)	233, 788
AgeI	ACCGGT	1 cut(s)	1332
AgsI	TTSAA	8 cut(s)	168, 189, 247, 611, 692, 736, 1250, 2003
AjiI	CACGTC	1 cut(s)	1015
AloI	GAACNNNNNNTCC	2 cut(s)	1807, 1839
AluBI	AGCT	8 cut(s)	316, 516, 807, 821, 868, 1506, 1726, 2046
AluI	AGCT	8 cut(s)	316, 516, 807, 821, 868, 1506, 1726, 2046
Alw21I	GWGCWC	2 cut(s)	318, 1728
Alw26I	GTCTC	3 cut(s)	479, 777, 922
AlwI	GGATC	4 cut(s)	901, 989, 1002, 1956
Ama87I	CYCGRG	3 cut(s)	1081, 1104, 1284
ApeKI	GCWGC	8 cut(s)	20, 23, 55, 224, 700, 818, 1737, 2043
ApoI	RAATTY	5 cut(s)	493, 612, 1240, 1463, 1477
ArsI	GACNNNNNNTTYG	2 cut(s)	478, 510
AsiGI	ACCGGT	1 cut(s)	1332
Asp700I	GAANNNNTTC	2 cut(s)	687, 1260
Asp718I	GGTACC	1 cut(s)	1122
AspLEI	GCGC	4 cut(s)	92, 232, 981, 1979
AspS9I	GGNCC	8 cut(s)	67, 270, 524, 1107, 1189, 1276, 1335, 2076
AsuC2I	CCSGG	8 cut(s)	101, 311, 490, 521, 1266, 1285, 1286, 1930
AsuHPI	GGTGA	3 cut(s)	89, 416, 1760
AsuII	TTCGAA	2 cut(s)	720, 1400
AvaI	CYCGRG	3 cut(s)	1081, 1104, 1284
AvaII	GGWCC	4 cut(s)	524, 1189, 1335, 2076
AxyI	CCTNAGG	1 cut(s)	63
BamHI	GGATCC	1 cut(s)	994
BanI	GGYRCC	1 cut(s)	1122
BanII	GRGCYC	2 cut(s)	318, 1728
BauI	CACGAG	1 cut(s)	1111
BbrPI	CACGTG	1 cut(s)	1195
BbsI	GAAGAC	4 cut(s)	498, 654, 690, 1358
Bbv12I	GWGCWC	2 cut(s)	318, 1728
BbvCI	CCTCAGC	1 cut(s)	2015
BbvI	GCAGC	8 cut(s)	32, 35, 67, 236, 712, 830, 1749, 2055
BceAI	ACGGC	4 cut(s)	451, 901, 982, 1705
BcgI	CGANNNNNNTGC	2 cut(s)	131, 165
BcnI	CCSGG	8 cut(s)	101, 311, 490, 521, 1266, 1285, 1286, 1930
BcoDI	GTCTC	3 cut(s)	479, 777, 922
BfaI	CTAG	3 cut(s)	1010, 1590, 1809
BfoI	RGCGCY	1 cut(s)	982
BfrI	CTTAAG	2 cut(s)	233, 788
BfuAI	ACCTGC	1 cut(s)	2064
BglII	AGATCT	2 cut(s)	757, 1453
Bme1390I	CCNGG	8 cut(s)	101, 311, 490, 521, 1266, 1285, 1286, 1930
Bme18I	GGWCC	4 cut(s)	524, 1189, 1335, 2076
BmeT110I	CYCGRG	3 cut(s)	1081, 1104, 1284
BmgBI	CACGTC	1 cut(s)	1015
BmgT120I	GGNCC	8 cut(s)	67, 270, 524, 1107, 1189, 1276, 1335, 2076
BmiI	GGNNCC	9 cut(s)	162, 271, 525, 996, 1124, 1230, 1263, 1890, 1970
BmrFI	CCNGG	8 cut(s)	101, 311, 490, 521, 1266, 1285, 1286, 1930
BmsI	GCATC	4 cut(s)	613, 1140, 1149, 1193
BoxI	GACNNNNGTC	3 cut(s)	1017, 1038, 1059
BpiI	GAAGAC	4 cut(s)	498, 654, 690, 1358
BplI	GAGNNNNNCTC	4 cut(s)	344, 376, 1972, 2004
BpmI	CTGGAG	2 cut(s)	1167, 2068
Bpu10I	CCTNAGC	1 cut(s)	2015
Bpu14I	TTCGAA	2 cut(s)	720, 1400
BpuMI	CCSGG	8 cut(s)	101, 311, 490, 521, 1266, 1285, 1286, 1930
Bsa29I	ATCGAT	1 cut(s)	1681
BsaAI	YACGTR	1 cut(s)	1195
BsaHI	GRCGYC	1 cut(s)	1517
BsaI	GGTCTC	2 cut(s)	479, 777
BsaJI	CCNNGG	8 cut(s)	520, 540, 998, 1103, 1145, 1284, 1419, 1767
BsaWI	WCCGGW	4 cut(s)	526, 1219, 1332, 1971
BsaXI	ACNNNNNCTCC	4 cut(s)	1786, 1807, 1816, 1837
Bsc4I	CCNNNNNNNGG	9 cut(s)	100, 257, 260, 496, 519, 526, 1284, 1285, 1311
Bse118I	RCCGGY	2 cut(s)	975, 1332
Bse1I	ACTGG	3 cut(s)	580, 704, 1184
Bse21I	CCTNAGG	1 cut(s)	63
Bse3DI	GCAATG	2 cut(s)	902, 1885
BseCI	ATCGAT	1 cut(s)	1681
BseDI	CCNNGG	8 cut(s)	520, 540, 998, 1103, 1145, 1284, 1419, 1767
BseGI	GGATG	6 cut(s)	83, 628, 1029, 1050, 1155, 1495
BseLI	CCNNNNNNNGG	9 cut(s)	100, 257, 260, 496, 519, 526, 1284, 1285, 1311
BseMI	GCAATG	2 cut(s)	902, 1885
BseMII	CTCAG	9 cut(s)	77, 782, 959, 1203, 1448, 1475, 1491, 1741, 2006
BseNI	ACTGG	3 cut(s)	580, 704, 1184
BseX3I	CGGCCG	2 cut(s)	436, 973
BseXI	GCAGC	8 cut(s)	32, 35, 67, 236, 712, 830, 1749, 2055
BseYI	CCCAGC	1 cut(s)	8
Bsh1236I	CGCG	4 cut(s)	230, 1037, 1058, 1979
Bsh1285I	CGRYCG	3 cut(s)	439, 976, 1333
BshNI	GGYRCC	1 cut(s)	1122
BshTI	ACCGGT	1 cut(s)	1332
BshVI	ATCGAT	1 cut(s)	1681
BsiEI	CGRYCG	3 cut(s)	439, 976, 1333
BsiHKAI	GWGCWC	2 cut(s)	318, 1728
BsiHKCI	CYCGRG	3 cut(s)	1081, 1104, 1284
BslFI	GGGAC	4 cut(s)	617, 1130, 1301, 1936
BslI	CCNNNNNNNGG	9 cut(s)	100, 257, 260, 496, 519, 526, 1284, 1285, 1311
BsmAI	GTCTC	3 cut(s)	479, 777, 922
BsmFI	GGGAC	4 cut(s)	617, 1130, 1301, 1936
BsmI	GAATGC	2 cut(s)	1408, 2016
Bso31I	GGTCTC	2 cut(s)	479, 777
BsoBI	CYCGRG	3 cut(s)	1081, 1104, 1284
Bsp119I	TTCGAA	2 cut(s)	720, 1400
Bsp1286I	GDGCHC	2 cut(s)	318, 1728
Bsp143I	GATC	8 cut(s)	748, 757, 893, 994, 1453, 1678, 1682, 1948
BspCNI	CTCAG	9 cut(s)	76, 781, 958, 1204, 1449, 1476, 1492, 1740, 2007
BspDI	ATCGAT	1 cut(s)	1681
BspFNI	CGCG	4 cut(s)	230, 1037, 1058, 1979
BspLI	GGNNCC	9 cut(s)	162, 271, 525, 996, 1124, 1230, 1263, 1890, 1970
BspMI	ACCTGC	1 cut(s)	2064
BspPI	GGATC	4 cut(s)	901, 989, 1002, 1956
BspQI	GCTCTTC	3 cut(s)	99, 1316, 1868
BspT104I	TTCGAA	2 cut(s)	720, 1400
BspT107I	GGYRCC	1 cut(s)	1122
BspTI	CTTAAG	2 cut(s)	233, 788
BspTNI	GGTCTC	2 cut(s)	479, 777
BsrBI	CCGCTC	2 cut(s)	1699, 2055
BsrDI	GCAATG	2 cut(s)	902, 1885
BsrFI	RCCGGY	2 cut(s)	975, 1332
BsrI	ACTGG	3 cut(s)	580, 704, 1184
BssAI	RCCGGY	2 cut(s)	975, 1332
BssECI	CCNNGG	8 cut(s)	520, 540, 998, 1103, 1145, 1284, 1419, 1767
BssMI	GATC	8 cut(s)	748, 757, 893, 994, 1453, 1678, 1682, 1948
BssNI	GRCGYC	1 cut(s)	1517
BssSI	CACGAG	1 cut(s)	1111
BssT1I	CCWWGG	3 cut(s)	540, 1419, 1767
Bst2BI	CACGAG	1 cut(s)	1111
Bst4CI	ACNGT	3 cut(s)	933, 1261, 1438
BstACI	GRCGYC	1 cut(s)	1517
BstAFI	CTTAAG	2 cut(s)	233, 788
BstAPI	GCANNNNNTGC	1 cut(s)	706
BstBAI	YACGTR	1 cut(s)	1195
BstBI	TTCGAA	2 cut(s)	720, 1400
BstC8I	GCNNGC	1 cut(s)	977
BstF5I	GGATG	6 cut(s)	83, 628, 1029, 1050, 1155, 1495
BstFNI	CGCG	4 cut(s)	230, 1037, 1058, 1979
BstH2I	RGCGCY	1 cut(s)	982
BstHHI	GCGC	4 cut(s)	92, 232, 981, 1979
BstKTI	GATC	8 cut(s)	751, 760, 896, 997, 1456, 1681, 1685, 1951
BstMAI	GTCTC	3 cut(s)	479, 777, 922
BstMBI	GATC	8 cut(s)	748, 757, 893, 994, 1453, 1678, 1682, 1948
BstMCI	CGRYCG	3 cut(s)	439, 976, 1333
BstPAI	GACNNNNGTC	3 cut(s)	1017, 1038, 1059
BstSCI	CCNGG	8 cut(s)	99, 309, 488, 519, 1264, 1283, 1284, 1928
BstUI	CGCG	4 cut(s)	230, 1037, 1058, 1979
BstV1I	GCAGC	8 cut(s)	32, 35, 67, 236, 712, 830, 1749, 2055
BstV2I	GAAGAC	4 cut(s)	498, 654, 690, 1358
BstX2I	RGATCY	3 cut(s)	757, 994, 1453
BstXI	CCANNNNNNTGG	2 cut(s)	587, 907
BstYI	RGATCY	3 cut(s)	757, 994, 1453
BstZI	CGGCCG	2 cut(s)	436, 973
Bsu15I	ATCGAT	1 cut(s)	1681
Bsu36I	CCTNAGG	1 cut(s)	63
BsuTUI	ATCGAT	1 cut(s)	1681
BtrI	CACGTC	1 cut(s)	1015
BtsCI	GGATG	6 cut(s)	83, 628, 1029, 1050, 1155, 1495
BtsIMutI	CAGTG	3 cut(s)	468, 711, 1191
BveI	ACCTGC	1 cut(s)	2064
Cac8I	GCNNGC	1 cut(s)	977
CfoI	GCGC	4 cut(s)	92, 232, 981, 1979
Cfr10I	RCCGGY	2 cut(s)	975, 1332
Cfr13I	GGNCC	8 cut(s)	67, 270, 524, 1107, 1189, 1276, 1335, 2076
Cfr9I	CCCGGG	1 cut(s)	1284
ClaI	ATCGAT	1 cut(s)	1681
CseI	GACGC	5 cut(s)	1043, 1064, 1187, 1217, 1506
Csp6I	GTAC	2 cut(s)	1123, 2108
CspAI	ACCGGT	1 cut(s)	1332
CspCI	CAANNNNNGTGG	4 cut(s)	457, 492, 1674, 1709
CviAII	CATG	4 cut(s)	132, 1829, 1867, 2084
CviQI	GTAC	2 cut(s)	1123, 2108
DpnI	GATC	8 cut(s)	750, 759, 895, 996, 1455, 1680, 1684, 1950
DpnII	GATC	8 cut(s)	748, 757, 893, 994, 1453, 1678, 1682, 1948
DraIII	CACNNNGTG	1 cut(s)	411
DrdI	GACNNNNNNGTC	1 cut(s)	479
DseDI	GACNNNNNNGTC	1 cut(s)	479
EaeI	YGGCCR	4 cut(s)	436, 897, 973, 1718
EagI	CGGCCG	2 cut(s)	436, 973
EciI	GGCGGA	6 cut(s)	895, 906, 1330, 1388, 1548, 2073
Ecl136II	GAGCTC	2 cut(s)	316, 1726
EclXI	CGGCCG	2 cut(s)	436, 973
Eco130I	CCWWGG	3 cut(s)	540, 1419, 1767
Eco24I	GRGCYC	2 cut(s)	318, 1728
Eco31I	GGTCTC	2 cut(s)	479, 777
Eco32I	GATATC	1 cut(s)	1068
Eco47I	GGWCC	4 cut(s)	524, 1189, 1335, 2076
Eco52I	CGGCCG	2 cut(s)	436, 973
Eco53kI	GAGCTC	2 cut(s)	316, 1726
Eco57I	CTGAAG	1 cut(s)	890
Eco72I	CACGTG	1 cut(s)	1195
Eco81I	CCTNAGG	1 cut(s)	63
Eco88I	CYCGRG	3 cut(s)	1081, 1104, 1284
EcoICRI	GAGCTC	2 cut(s)	316, 1726
EcoO109I	RGGNCCY	1 cut(s)	270
EcoRI	GAATTC	2 cut(s)	1240, 1477
EcoRV	GATATC	1 cut(s)	1068
EcoT14I	CCWWGG	3 cut(s)	540, 1419, 1767
EcoT38I	GRGCYC	2 cut(s)	318, 1728
ErhI	CCWWGG	3 cut(s)	540, 1419, 1767
FaeI	CATG	4 cut(s)	135, 1832, 1870, 2087
FaqI	GGGAC	4 cut(s)	617, 1130, 1301, 1936
FatI	CATG	4 cut(s)	131, 1828, 1866, 2083
FauI	CCCGC	5 cut(s)	793, 1030, 1051, 1262, 1877
FokI	GGATG	6 cut(s)	70, 635, 1036, 1057, 1162, 1502
FriOI	GRGCYC	2 cut(s)	318, 1728
FspBI	CTAG	3 cut(s)	1010, 1590, 1809
GlaI	GCGC	4 cut(s)	91, 231, 980, 1978
GsaI	CCCAGC	1 cut(s)	12
GsuI	CTGGAG	2 cut(s)	1167, 2068
HaeII	RGCGCY	1 cut(s)	982
HgaI	GACGC	5 cut(s)	1043, 1064, 1187, 1217, 1506
HhaI	GCGC	4 cut(s)	92, 232, 981, 1979
Hin1I	GRCGYC	1 cut(s)	1517
Hin1II	CATG	4 cut(s)	135, 1832, 1870, 2087
Hin6I	GCGC	4 cut(s)	90, 230, 979, 1977
HinP1I	GCGC	4 cut(s)	90, 230, 979, 1977
HindIII	AAGCTT	1 cut(s)	805
HinfI	GANTC	7 cut(s)	4, 764, 1216, 1301, 1712, 2029, 2061
HphI	GGTGA	3 cut(s)	89, 416, 1760
Hpy166II	GTNNAC	2 cut(s)	414, 1192
Hpy188III	TCNNGA	7 cut(s)	195, 484, 659, 761, 925, 1442, 2065
Hpy8I	GTNNAC	2 cut(s)	414, 1192
Hpy99I	CGWCG	5 cut(s)	324, 398, 437, 1211, 1522
HpyAV	CCTTC	2 cut(s)	174, 448
HpyCH4III	ACNGT	3 cut(s)	933, 1261, 1438
HpyCH4IV	ACGT	5 cut(s)	396, 474, 1014, 1139, 1194
HpyCH4V	TGCA	2 cut(s)	626, 1856
HpySE526I	ACGT	5 cut(s)	396, 474, 1014, 1139, 1194
Hsp92I	GRCGYC	1 cut(s)	1517
Hsp92II	CATG	4 cut(s)	135, 1832, 1870, 2087
HspAI	GCGC	4 cut(s)	90, 230, 979, 1977
KpnI	GGTACC	1 cut(s)	1126
KroI	GCCGGC	1 cut(s)	975
KroNI	GCCGGC	1 cut(s)	977
Kzo9I	GATC	8 cut(s)	748, 757, 893, 994, 1453, 1678, 1682, 1948
LguI	GCTCTTC	3 cut(s)	99, 1316, 1868
Lsp1109I	GCAGC	8 cut(s)	32, 35, 67, 236, 712, 830, 1749, 2055
LweI	GCATC	4 cut(s)	613, 1140, 1149, 1193
MaeI	CTAG	3 cut(s)	1010, 1590, 1809
MaeII	ACGT	5 cut(s)	396, 474, 1014, 1139, 1194
MaeIII	GTNAC	2 cut(s)	95, 640
MalI	GATC	8 cut(s)	750, 759, 895, 996, 1455, 1680, 1684, 1950
MbiI	CCGCTC	2 cut(s)	1699, 2055
MboI	GATC	8 cut(s)	748, 757, 893, 994, 1453, 1678, 1682, 1948
MfeI	CAATTG	1 cut(s)	627
MflI	RGATCY	3 cut(s)	757, 994, 1453
MhlI	GDGCHC	2 cut(s)	318, 1728
MlyI	GAGTC	4 cut(s)	1295, 1721, 2023, 2070
MmeI	TCCRAC	9 cut(s)	62, 138, 343, 930, 1001, 1022, 1043, 1362, 1793
MroNI	GCCGGC	1 cut(s)	975
MroXI	GAANNNNTTC	2 cut(s)	687, 1260
MseI	TTAA	3 cut(s)	234, 789, 1776
MslI	CAYNNNNRTG	1 cut(s)	1833
MspA1I	CMGCKG	3 cut(s)	12, 1740, 2046
MspCI	CTTAAG	2 cut(s)	233, 788
MspR9I	CCNGG	8 cut(s)	101, 311, 490, 521, 1266, 1285, 1286, 1930
MunI	CAATTG	1 cut(s)	627
Mva1269I	GAATGC	2 cut(s)	1408, 2016
MvnI	CGCG	4 cut(s)	230, 1037, 1058, 1979
NaeI	GCCGGC	1 cut(s)	977
NciI	CCSGG	8 cut(s)	101, 311, 490, 521, 1266, 1285, 1286, 1930
NdeII	GATC	8 cut(s)	748, 757, 893, 994, 1453, 1678, 1682, 1948
NgoMIV	GCCGGC	1 cut(s)	975
NlaIII	CATG	4 cut(s)	135, 1832, 1870, 2087
NlaIV	GGNNCC	9 cut(s)	162, 271, 525, 996, 1124, 1230, 1263, 1890, 1970
NmeAIII	GCCGAG	2 cut(s)	178, 1291
NmuCI	GTSAC	1 cut(s)	95
NspV	TTCGAA	2 cut(s)	720, 1400
PciSI	GCTCTTC	3 cut(s)	99, 1316, 1868
PcsI	WCGNNNNNNNCGW	1 cut(s)	480
PctI	GAATGC	2 cut(s)	1408, 2016
PdiI	GCCGGC	1 cut(s)	977
PdmI	GAANNNNTTC	2 cut(s)	687, 1260
PfeI	GAWTC	3 cut(s)	4, 764, 1216
PfoI	TCCNGGA	1 cut(s)	309
PinAI	ACCGGT	1 cut(s)	1332
PleI	GAGTC	4 cut(s)	1295, 1720, 2023, 2069
PmaCI	CACGTG	1 cut(s)	1195
PmlI	CACGTG	1 cut(s)	1195
PpsI	GAGTC	4 cut(s)	1295, 1720, 2023, 2069
Ppu21I	YACGTR	1 cut(s)	1195
PshAI	GACNNNNGTC	3 cut(s)	1017, 1038, 1059
Psp124BI	GAGCTC	2 cut(s)	318, 1728
Psp1406I	AACGTT	1 cut(s)	1139
PspCI	CACGTG	1 cut(s)	1195
PspFI	CCCAGC	1 cut(s)	8
PspN4I	GGNNCC	9 cut(s)	162, 271, 525, 996, 1124, 1230, 1263, 1890, 1970
PspPI	GGNCC	8 cut(s)	67, 270, 524, 1107, 1189, 1276, 1335, 2076
PsuI	RGATCY	3 cut(s)	757, 994, 1453
PvuII	CAGCTG	1 cut(s)	2046
RsaI	GTAC	2 cut(s)	1124, 2109
RsaNI	GTAC	2 cut(s)	1123, 2108
RseI	CAYNNNNRTG	1 cut(s)	1833
SacI	GAGCTC	2 cut(s)	318, 1728
SapI	GCTCTTC	3 cut(s)	99, 1316, 1868
SaqAI	TTAA	3 cut(s)	234, 789, 1776
Sau3AI	GATC	8 cut(s)	748, 757, 893, 994, 1453, 1678, 1682, 1948
Sau96I	GGNCC	8 cut(s)	67, 270, 524, 1107, 1189, 1276, 1335, 2076
SchI	GAGTC	4 cut(s)	1295, 1721, 2023, 2070
ScrFI	CCNGG	8 cut(s)	101, 311, 490, 521, 1266, 1285, 1286, 1930
SduI	GDGCHC	2 cut(s)	318, 1728
SfaNI	GCATC	4 cut(s)	613, 1140, 1149, 1193
SfuI	TTCGAA	2 cut(s)	720, 1400
SinI	GGWCC	4 cut(s)	524, 1189, 1335, 2076
SmaI	CCCGGG	1 cut(s)	1286
SmiMI	CAYNNNNRTG	1 cut(s)	1833
SmlI	CTYRAG	2 cut(s)	233, 788
SmoI	CTYRAG	2 cut(s)	233, 788
SspMI	CTAG	3 cut(s)	1010, 1590, 1809
SstI	GAGCTC	2 cut(s)	318, 1728
StyD4I	CCNGG	8 cut(s)	99, 309, 488, 519, 1264, 1283, 1284, 1928
StyI	CCWWGG	3 cut(s)	540, 1419, 1767
TaaI	ACNGT	3 cut(s)	933, 1261, 1438
TaiI	ACGT	5 cut(s)	399, 477, 1017, 1142, 1197
TfiI	GAWTC	3 cut(s)	4, 764, 1216
Tru1I	TTAA	3 cut(s)	234, 789, 1776
Tru9I	TTAA	3 cut(s)	234, 789, 1776
TscAI	CASTG	3 cut(s)	475, 711, 1191
TseFI	GTSAC	1 cut(s)	95
TseI	GCWGC	8 cut(s)	20, 23, 55, 224, 700, 818, 1737, 2043
Tsp45I	GTSAC	1 cut(s)	95
TspDTI	ATGAA	4 cut(s)	17, 758, 1398, 1403
TspGWI	ACGGA	3 cut(s)	1007, 1981, 2022
TspMI	CCCGGG	1 cut(s)	1284
TspRI	CASTG	3 cut(s)	475, 711, 1191
Vha464I	CTTAAG	2 cut(s)	233, 788
VpaK11BI	GGWCC	4 cut(s)	524, 1189, 1335, 2076
XapI	RAATTY	5 cut(s)	493, 612, 1240, 1463, 1477
XcmI	CCANNNNNNNNNTGG	1 cut(s)	907
XmaI	CCCGGG	1 cut(s)	1284
XmnI	GAANNNNTTC	2 cut(s)	687, 1260
XspI	CTAG	3 cut(s)	1010, 1590, 1809

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.