Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0013274

Physical Location & Seq

Genomic Coordinates Reverse (-)

38294107 .. 38297649

Gene Structure 3543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00416260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2163 bp

ATGAATCCCAGCACGGACCCACCACCACCACCAAACCCGCCGCAGCCCCACCGACCCTCTACCTCCTGCGACCGCCACCCCGAAGAGAATTTCACCGGCTTCTGCCCCTCATGCCTCTGCGAACGACTAGCCGTTTTGCACCCTTCAACCACCTCTGCTTCTTCCTCGTCCCGAAAACCACCGACTTCCTCGACCGCCGCCGCTGCCCTTAAGGCCATTTTCAAGCCCCCCATTGGCGGTGGCGGGGCCTCCAGCAAAGCCCGACCCACTACCTCCTTTTTTCCTGAGCTCCGCCGCACCAAGTCGTTCTCCGCCTCCAAAAACGAAGGATTCTCCGGCGTTTTCGAGCCGCAGAGGAAGTCCTGCGACGTTCGCGGCCGGAATACGCTCTGGTGTCTCTTCAATCAGGAGAACCCCAACAAGAAAGAGCAACCCACTTGGGGAGCTGCCGGGCCTGAGACTGAAGTCGAAACCAGAAACTTAGCTGGGCCCTCTTCGAGCTTTCGAGGTCCGGTGTTCGAGTCCAAAGAGGAAGAAGAAGAAGAAGACGACGAAGAGGAGGAGGAAGAGGAAGAGGAAGAACAGAACCAGAACCAGAACGACGGAGGAATAGGGAAGATTTCCGACGAACTCAATGTGGGCAATGTCAGTGAAATCAGAGTTCCAGAAATCGTAGAGGAGGAAGAAGAAGACGAAATACAACAGCACCAACTCAACCAACAACAATCAGAGGCACTACAATTTCAAGAGGAAGAGTTGAAGCCCATGAAGGACCACATAGATCTCGACGCTCAGACCAAGAAGAGAGACCTGAAAGAGATCGCCGGAAGCTTCTGGTCTGCCGCTTCGGTGTTCAGCAAGAAACTGCAGAAGTGGCGGCAGAAGCAGAAGCTTAAGAAGCGGCGCAGCGGCGGCGGATCGGCCACATTGCCCGTCGAGAAGCCCATTGGGCGACAGTTCAGAGAAACCCAGTCGGAGATCGCCGATTACGGCTTCGGTCGGCGCTCATGCGACACCGATCCCCGATTTTCGCTCGATGCGGGTCGGATGTCACTCGACGCGGGTCGGATGTCTTTCGACGACCCGAGATACTCTTTCGACGAGCCTCGCGCTTCGTGGGACGGGTACTTAATTGGAAAGACTTTTCCGAGAATGCCCACCATGCTCTCGGTGGTGGAGGATGCTCCAGTGGTTGTTTCGAGAATCGATGCTCAAATTCCGGTGGAGGAGCCGATGAATGCTATTAACGAAGAGGACCCGGTTCCTGGCGGGTCGGTCCAGACCCAGAACTACTATTCGGACTCTTCTTCCAGGCGGCGCAAGAGTCTGGACCGGTCCAACTCCATCAGGAAGACGGCGGCGGCGGTGGTGGCTGAGATTGACGAGTTGAAGTCGGTTTCGAATTCCAAAGTGTCGCCCACTACTGCTGACTACTTCCATGGGCCGAAGCTGGTGGCTCCTGATCGAGAGTCGAGAGATTCTAACTCGAACTCTCTCCGCGATGACTGCTCGGAGACCTTTGAGATGGCTTTTCGCGGTGGCGATCCTGTGCTACGCGGCGGTGATTCGGTGTCTCGCGGCGGGGATTCCGCGGCGTCGGTGGTGGGGAATGGGGAGAGGAAAGATTGTAAGCAGAAGTCTAGAAGGTGGAGCAAGGCCTGGAACATTTGGAGTTTCATACACAGGAGGAGTGGGAACAAGGAGGATGATGAGGATAGGTATAGTAGTAGGCCTAATGGGGTAGAGAGGTCGTTTTCGGAGTCTTGGCCGGAGCTGAGAGGCGGCGGGGAGCGAAATGGGGAAGCAAAGGGTTTCAATCCAAAGATTACGAGGAGCAACAGCAGTGCTAGTTGGAGAAACTCACATAGCTTTGGAGTTGGGGCTTTTGGGAGTATGAGGAAGAATGGTGCTGTTGTTGAGCCACATGTGAATGGAAATGGCAATGCAAATGGGAATGTGAATGGGAATGGAAGGAAGAAGAAGGAAGAGTTTGTGCTGGAGAGGAATCGGAGCGCAAGGTATTCACCGAATCACATTGACAATGGACTCTTGCGGTTCTACTTGACGCCGATGAGGAACAGCTGGAGGAGTGGAGGAGGAGCTGGGAAGAGCAGGTCGAATCATGCACATTCCATCGCCAGAAGTGTACTCCGATTGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009965 GO:0010016 GO:0010051 GO:0010087 GO:0010088 GO:0010154 GO:0010232 GO:0010233 GO:0010588 GO:0016020 GO:0016324 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0044425 GO:0044459 GO:0044464 GO:0045177 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0061458 GO:0071944 GO:0090698 GO:0098590 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF740

Protein Analysis

720

Amino Acids

79.98

Weight (kDa)

6.4

Isoelectric Point (pI)

66.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF740	PF05340	10 - 695	1.4e-262	Protein of unknown function (DUF740)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38070
fragaria_vesca	FvH4_6g12000
malus_domestica	MD04G1147100.v1.1 MD12G1160400.v1.1
prunus_persica	Prupe.6G270900_v2.0.a1
pyrus_communis	pycom04g13290 pycom12g15220
rosa_chinensis	RchiOBHm_Chr3g0463831
rosa_laevigata	RLG00000024753
rosa_multiflora	Rmu_sc0004796.1_g000009
rosa_roxburghii	Rroxscaffold_6G00399380 Rroxscaffold_6G00416260
rosa_rugosa	Rorug03G0068100
rosa_samantha	Rh3AG125200 Rh3BG129500 Rh3CG132000 Rh3DG130500
rosa_wichuraiana	Rw3G010580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2103
AccII	CGCG	8 cut(s)	375, 1061, 1110, 1500, 1536, 1557, 1578, 1592
AclWI	GGATC	3 cut(s)	925, 1013, 1538
AcoI	YGGCCR	3 cut(s)	376, 921, 1766
AcsI	RAATTY	3 cut(s)	88, 1215, 1402
AcuI	CTGAAG	1 cut(s)	483
AcyI	GRCGYC	2 cut(s)	1595, 2066
AfaI	GTAC	3 cut(s)	1127, 2148, 2159
AfiI	CCNNNNNNNGG	4 cut(s)	233, 236, 440, 1265
AflII	CTTAAG	2 cut(s)	209, 893
AflIII	ACRYGT	1 cut(s)	1924
AgeI	ACCGGT	1 cut(s)	1332
AgsI	TTSAA	7 cut(s)	147, 223, 403, 746, 760, 1390, 1816
AjnI	CCWGG	3 cut(s)	1264, 1310, 1658
Alw21I	GWGCWC	1 cut(s)	291
Alw26I	GTCTC	5 cut(s)	401, 452, 801, 1508, 1578
AlwI	GGATC	3 cut(s)	925, 1013, 1538
Ama87I	CYCGRG	1 cut(s)	1084
ApaI	GGGCCC	1 cut(s)	492
ApeKI	GCWGC	4 cut(s)	43, 203, 446, 906
ApoI	RAATTY	3 cut(s)	88, 1215, 1402
AsiGI	ACCGGT	1 cut(s)	1332
AspLEI	GCGC	5 cut(s)	906, 1005, 1112, 1320, 2015
AsuC2I	CCSGG	2 cut(s)	451, 1259
AsuHPI	GGTGA	3 cut(s)	85, 1574, 2016
AsuII	TTCGAA	1 cut(s)	1400
AvaI	CYCGRG	1 cut(s)	1084
AvaII	GGWCC	7 cut(s)	16, 509, 772, 1255, 1276, 1330, 1335
BaeGI	GKGCMC	1 cut(s)	492
BanII	GRGCYC	2 cut(s)	291, 492
BarI	GAAGNNNNNNTAC	2 cut(s)	681, 713
BbsI	GAAGAC	3 cut(s)	552, 696, 1358
Bbv12I	GWGCWC	1 cut(s)	291
BbvI	GCAGC	4 cut(s)	55, 190, 433, 918
BccI	CCATC	3 cut(s)	1352, 1519, 2141
BceAI	ACGGC	3 cut(s)	116, 1006, 1371
BciT130I	CCWGG	3 cut(s)	1266, 1312, 1660
BcnI	CCSGG	2 cut(s)	451, 1259
BcoDI	GTCTC	5 cut(s)	401, 452, 801, 1508, 1578
BfaI	CTAG	3 cut(s)	128, 1641, 1848
BfmI	CTRYAG	1 cut(s)	866
BfoI	RGCGCY	1 cut(s)	1006
BfrI	CTTAAG	2 cut(s)	209, 893
BfuAI	ACCTGC	1 cut(s)	2103
BglI	GCCNNNNNGGC	2 cut(s)	212, 949
BglII	AGATCT	1 cut(s)	781
Bme1390I	CCNGG	5 cut(s)	451, 1259, 1266, 1312, 1660
Bme18I	GGWCC	7 cut(s)	16, 509, 772, 1255, 1276, 1330, 1335
BmeT110I	CYCGRG	1 cut(s)	1084
BmiI	GGNNCC	7 cut(s)	18, 247, 490, 1230, 1257, 1263, 1458
BmrFI	CCNGG	5 cut(s)	451, 1259, 1266, 1312, 1660
BmrI	ACTGGG	1 cut(s)	964
BmsI	GCATC	3 cut(s)	1027, 1171, 1198
BmuI	ACTGGG	1 cut(s)	964
BoxI	GACNNNNGTC	2 cut(s)	464, 1062
BpiI	GAAGAC	3 cut(s)	552, 696, 1358
BpmI	CTGGAG	4 cut(s)	235, 1170, 2018, 2104
Bpu10I	CCTNAGC	1 cut(s)	285
Bpu14I	TTCGAA	1 cut(s)	1400
BpuMI	CCSGG	2 cut(s)	451, 1259
Bsa29I	ATCGAT	1 cut(s)	1206
BsaHI	GRCGYC	2 cut(s)	1595, 2066
BsaI	GGTCTC	2 cut(s)	801, 1508
BsaJI	CCNNGG	2 cut(s)	1438, 1590
BsaWI	WCCGGW	3 cut(s)	511, 1219, 1332
Bsc4I	CCNNNNNNNGG	4 cut(s)	233, 236, 440, 1265
Bse118I	RCCGGY	2 cut(s)	95, 1332
Bse1I	ACTGG	2 cut(s)	970, 1187
Bse3DI	GCAATG	3 cut(s)	649, 926, 1948
BseBI	CCWGG	3 cut(s)	1266, 1312, 1660
BseCI	ATCGAT	1 cut(s)	1206
BseDI	CCNNGG	2 cut(s)	1438, 1590
BseGI	GGATG	4 cut(s)	1053, 1074, 1186, 1711
BseLI	CCNNNNNNNGG	4 cut(s)	233, 236, 440, 1265
BseMI	GCAATG	3 cut(s)	649, 926, 1948
BseMII	CTCAG	5 cut(s)	276, 447, 806, 1365, 1766
BseNI	ACTGG	2 cut(s)	970, 1187
BseRI	GAGGAG	9 cut(s)	572, 575, 692, 1241, 1702, 1846, 2101, 2109, 2112
BseSI	GKGCMC	1 cut(s)	492
BseX3I	CGGCCG	1 cut(s)	376
BseXI	GCAGC	4 cut(s)	55, 190, 433, 918
BseYI	CCCAGC	3 cut(s)	8, 485, 2102
Bsh1236I	CGCG	8 cut(s)	375, 1061, 1110, 1500, 1536, 1557, 1578, 1592
Bsh1285I	CGRYCG	4 cut(s)	73, 195, 379, 1000
BshTI	ACCGGT	1 cut(s)	1332
BshVI	ATCGAT	1 cut(s)	1206
BsiEI	CGRYCG	4 cut(s)	73, 195, 379, 1000
BsiHKAI	GWGCWC	1 cut(s)	291
BsiHKCI	CYCGRG	1 cut(s)	1084
BslFI	GGGAC	2 cut(s)	154, 1133
BslI	CCNNNNNNNGG	4 cut(s)	233, 236, 440, 1265
BsmAI	GTCTC	5 cut(s)	401, 452, 801, 1508, 1578
BsmFI	GGGAC	2 cut(s)	154, 1133
BsmI	GAATGC	2 cut(s)	1158, 1243
Bso31I	GGTCTC	2 cut(s)	801, 1508
BsoBI	CYCGRG	1 cut(s)	1084
Bsp119I	TTCGAA	1 cut(s)	1400
Bsp120I	GGGCCC	1 cut(s)	488
Bsp1286I	GDGCHC	2 cut(s)	291, 492
Bsp143I	GATC	7 cut(s)	781, 819, 917, 978, 1018, 1462, 1543
Bsp19I	CCATGG	1 cut(s)	1438
BspCNI	CTCAG	5 cut(s)	277, 448, 805, 1366, 1767
BspDI	ATCGAT	1 cut(s)	1206
BspFNI	CGCG	8 cut(s)	375, 1061, 1110, 1500, 1536, 1557, 1578, 1592
BspLI	GGNNCC	7 cut(s)	18, 247, 490, 1230, 1257, 1263, 1458
BspMAI	CTGCAG	1 cut(s)	870
BspMI	ACCTGC	1 cut(s)	2103
BspPI	GGATC	3 cut(s)	925, 1013, 1538
BspQI	GCTCTTC	1 cut(s)	2102
BspT104I	TTCGAA	1 cut(s)	1400
BspTI	CTTAAG	2 cut(s)	209, 893
BspTNI	GGTCTC	2 cut(s)	801, 1508
BsrDI	GCAATG	3 cut(s)	649, 926, 1948
BsrFI	RCCGGY	2 cut(s)	95, 1332
BsrI	ACTGG	2 cut(s)	970, 1187
BssAI	RCCGGY	2 cut(s)	95, 1332
BssECI	CCNNGG	2 cut(s)	1438, 1590
BssMI	GATC	7 cut(s)	781, 819, 917, 978, 1018, 1462, 1543
BssNI	GRCGYC	2 cut(s)	1595, 2066
BssT1I	CCWWGG	1 cut(s)	1438
Bst2UI	CCWGG	3 cut(s)	1266, 1312, 1660
Bst4CI	ACNGT	1 cut(s)	957
BstACI	GRCGYC	2 cut(s)	1595, 2066
BstAFI	CTTAAG	2 cut(s)	209, 893
BstBI	TTCGAA	1 cut(s)	1400
BstDEI	CTNAG	6 cut(s)	285, 456, 481, 792, 1374, 1775
BstDSI	CCRYGG	2 cut(s)	1438, 1590
BstF5I	GGATG	4 cut(s)	1053, 1074, 1186, 1711
BstFNI	CGCG	8 cut(s)	375, 1061, 1110, 1500, 1536, 1557, 1578, 1592
BstH2I	RGCGCY	1 cut(s)	1006
BstHHI	GCGC	5 cut(s)	906, 1005, 1112, 1320, 2015
BstKTI	GATC	7 cut(s)	784, 822, 920, 981, 1021, 1465, 1546
BstMAI	GTCTC	5 cut(s)	401, 452, 801, 1508, 1578
BstMBI	GATC	7 cut(s)	781, 819, 917, 978, 1018, 1462, 1543
BstMCI	CGRYCG	4 cut(s)	73, 195, 379, 1000
BstNI	CCWGG	3 cut(s)	1266, 1312, 1660
BstNSI	RCATGY	1 cut(s)	1928
BstPAI	GACNNNNGTC	2 cut(s)	464, 1062
BstSCI	CCNGG	5 cut(s)	449, 1257, 1264, 1310, 1658
BstSFI	CTRYAG	1 cut(s)	866
BstSLI	GKGCMC	1 cut(s)	492
BstUI	CGCG	8 cut(s)	375, 1061, 1110, 1500, 1536, 1557, 1578, 1592
BstV1I	GCAGC	4 cut(s)	55, 190, 433, 918
BstV2I	GAAGAC	3 cut(s)	552, 696, 1358
BstX2I	RGATCY	1 cut(s)	781
BstYI	RGATCY	1 cut(s)	781
BstZI	CGGCCG	1 cut(s)	376
Bsu15I	ATCGAT	1 cut(s)	1206
BsuTUI	ATCGAT	1 cut(s)	1206
BtgI	CCRYGG	2 cut(s)	1438, 1590
BtgZI	GCGATG	2 cut(s)	1515, 2119
BtsCI	GGATG	4 cut(s)	1053, 1074, 1186, 1711
BtsI	GCAGTG	1 cut(s)	1849
BtsIMutI	CAGTG	3 cut(s)	655, 1194, 1849
BveI	ACCTGC	1 cut(s)	2103
CfoI	GCGC	5 cut(s)	906, 1005, 1112, 1320, 2015
Cfr10I	RCCGGY	2 cut(s)	95, 1332
Cfr42I	CCGCGG	1 cut(s)	1593
ClaI	ATCGAT	1 cut(s)	1206
CseI	GACGC	4 cut(s)	797, 1067, 1584, 2074
Csp6I	GTAC	3 cut(s)	1126, 2147, 2158
CspAI	ACCGGT	1 cut(s)	1332
CviAII	CATG	7 cut(s)	111, 766, 1008, 1162, 1439, 1925, 2123
CviQI	GTAC	3 cut(s)	1126, 2147, 2158
DdeI	CTNAG	6 cut(s)	285, 456, 481, 792, 1374, 1775
DpnI	GATC	7 cut(s)	783, 821, 919, 980, 1020, 1464, 1545
DpnII	GATC	7 cut(s)	781, 819, 917, 978, 1018, 1462, 1543
EaeI	YGGCCR	3 cut(s)	376, 921, 1766
EagI	CGGCCG	1 cut(s)	376
EciI	GGCGGA	3 cut(s)	281, 301, 930
Ecl136II	GAGCTC	1 cut(s)	289
EclXI	CGGCCG	1 cut(s)	376
Eco130I	CCWWGG	1 cut(s)	1438
Eco147I	AGGCCT	2 cut(s)	1658, 1732
Eco24I	GRGCYC	2 cut(s)	291, 492
Eco31I	GGTCTC	2 cut(s)	801, 1508
Eco47I	GGWCC	7 cut(s)	16, 509, 772, 1255, 1276, 1330, 1335
Eco52I	CGGCCG	1 cut(s)	376
Eco53kI	GAGCTC	1 cut(s)	289
Eco57I	CTGAAG	1 cut(s)	483
Eco88I	CYCGRG	1 cut(s)	1084
EcoICRI	GAGCTC	1 cut(s)	289
EcoO109I	RGGNCCY	3 cut(s)	246, 489, 1255
EcoRI	GAATTC	1 cut(s)	1402
EcoRII	CCWGG	3 cut(s)	1264, 1310, 1658
EcoT14I	CCWWGG	1 cut(s)	1438
EcoT38I	GRGCYC	2 cut(s)	291, 492
ErhI	CCWWGG	1 cut(s)	1438
FaeI	CATG	7 cut(s)	114, 769, 1011, 1165, 1442, 1928, 2126
FaqI	GGGAC	2 cut(s)	154, 1133
FatI	CATG	7 cut(s)	110, 765, 1007, 1161, 1438, 1924, 2122
FauI	CCCGC	7 cut(s)	45, 236, 1033, 1054, 1262, 1574, 1778
FokI	GGATG	4 cut(s)	1060, 1081, 1193, 1718
FriOI	GRGCYC	2 cut(s)	291, 492
FspBI	CTAG	3 cut(s)	128, 1641, 1848
GlaI	GCGC	5 cut(s)	905, 1004, 1111, 1319, 2014
GsaI	CCCAGC	3 cut(s)	12, 489, 2106
GsuI	CTGGAG	4 cut(s)	235, 1170, 2018, 2104
HaeII	RGCGCY	1 cut(s)	1006
HgaI	GACGC	4 cut(s)	797, 1067, 1584, 2074
HhaI	GCGC	5 cut(s)	906, 1005, 1112, 1320, 2015
Hin1I	GRCGYC	2 cut(s)	1595, 2066
Hin1II	CATG	7 cut(s)	114, 769, 1011, 1165, 1442, 1928, 2126
Hin6I	GCGC	5 cut(s)	904, 1003, 1110, 1318, 2013
HinP1I	GCGC	5 cut(s)	904, 1003, 1110, 1318, 2013
HindIII	AAGCTT	2 cut(s)	829, 890
HphI	GGTGA	3 cut(s)	85, 1574, 2016
Hpy166II	GTNNAC	1 cut(s)	2147
Hpy8I	GTNNAC	1 cut(s)	2147
HpyAV	CCTTC	6 cut(s)	153, 320, 763, 1638, 1965, 1975
HpyCH4III	ACNGT	1 cut(s)	957
HpyCH4IV	ACGT	1 cut(s)	369
HpyCH4V	TGCA	4 cut(s)	139, 868, 1946, 2126
HpyF3I	CTNAG	6 cut(s)	285, 456, 481, 792, 1374, 1775
HpySE526I	ACGT	1 cut(s)	369
Hsp92I	GRCGYC	2 cut(s)	1595, 2066
Hsp92II	CATG	7 cut(s)	114, 769, 1011, 1165, 1442, 1928, 2126
HspAI	GCGC	5 cut(s)	904, 1003, 1110, 1318, 2013
KspI	CCGCGG	1 cut(s)	1593
Kzo9I	GATC	7 cut(s)	781, 819, 917, 978, 1018, 1462, 1543
LguI	GCTCTTC	1 cut(s)	2102
Lsp1109I	GCAGC	4 cut(s)	55, 190, 433, 918
LweI	GCATC	3 cut(s)	1027, 1171, 1198
MaeI	CTAG	3 cut(s)	128, 1641, 1848
MaeII	ACGT	1 cut(s)	369
MaeIII	GTNAC	1 cut(s)	1050
MalI	GATC	7 cut(s)	783, 821, 919, 980, 1020, 1464, 1545
MboI	GATC	7 cut(s)	781, 819, 917, 978, 1018, 1462, 1543
MflI	RGATCY	1 cut(s)	781
MhlI	GDGCHC	2 cut(s)	291, 492
MluCI	AATT	5 cut(s)	88, 740, 1131, 1215, 1402
MlyI	GAGTC	6 cut(s)	530, 1295, 1333, 1478, 1769, 2040
MmeI	TCCRAC	6 cut(s)	648, 954, 1025, 1046, 1362, 1832
MseI	TTAA	4 cut(s)	210, 894, 1130, 1245
MslI	CAYNNNNRTG	1 cut(s)	1929
MspA1I	CMGCKG	4 cut(s)	203, 909, 1592, 2082
MspCI	CTTAAG	2 cut(s)	209, 893
MspR9I	CCNGG	5 cut(s)	451, 1259, 1266, 1312, 1660
Mva1269I	GAATGC	2 cut(s)	1158, 1243
MvaI	CCWGG	3 cut(s)	1266, 1312, 1660
MvnI	CGCG	8 cut(s)	375, 1061, 1110, 1500, 1536, 1557, 1578, 1592
NciI	CCSGG	2 cut(s)	451, 1259
NcoI	CCATGG	1 cut(s)	1438
NdeII	GATC	7 cut(s)	781, 819, 917, 978, 1018, 1462, 1543
NlaIII	CATG	7 cut(s)	114, 769, 1011, 1165, 1442, 1928, 2126
NlaIV	GGNNCC	7 cut(s)	18, 247, 490, 1230, 1257, 1263, 1458
NmuCI	GTSAC	1 cut(s)	1050
NspI	RCATGY	1 cut(s)	1928
NspV	TTCGAA	1 cut(s)	1400
PceI	AGGCCT	2 cut(s)	1658, 1732
PciI	ACATGT	1 cut(s)	1924
PciSI	GCTCTTC	1 cut(s)	2102
PctI	GAATGC	2 cut(s)	1158, 1243
PfeI	GAWTC	9 cut(s)	4, 330, 1203, 1478, 1565, 1586, 2005, 2029, 2119
PinAI	ACCGGT	1 cut(s)	1332
PleI	GAGTC	6 cut(s)	529, 1295, 1332, 1477, 1768, 2040
PpsI	GAGTC	6 cut(s)	529, 1295, 1332, 1477, 1768, 2040
PpuMI	RGGWCCY	1 cut(s)	1255
PscI	ACATGT	1 cut(s)	1924
PshAI	GACNNNNGTC	2 cut(s)	464, 1062
Psp124BI	GAGCTC	1 cut(s)	291
Psp5II	RGGWCCY	1 cut(s)	1255
Psp6I	CCWGG	3 cut(s)	1264, 1310, 1658
PspFI	CCCAGC	3 cut(s)	8, 485, 2102
PspGI	CCWGG	3 cut(s)	1264, 1310, 1658
PspN4I	GGNNCC	7 cut(s)	18, 247, 490, 1230, 1257, 1263, 1458
PspOMI	GGGCCC	1 cut(s)	488
PspPPI	RGGWCCY	1 cut(s)	1255
PstI	CTGCAG	1 cut(s)	870
PsuI	RGATCY	1 cut(s)	781
PvuII	CAGCTG	1 cut(s)	2082
RsaI	GTAC	3 cut(s)	1127, 2148, 2159
RsaNI	GTAC	3 cut(s)	1126, 2147, 2158
RseI	CAYNNNNRTG	1 cut(s)	1929
SacI	GAGCTC	1 cut(s)	291
SacII	CCGCGG	1 cut(s)	1593
SapI	GCTCTTC	1 cut(s)	2102
SaqAI	TTAA	4 cut(s)	210, 894, 1130, 1245
Sau3AI	GATC	7 cut(s)	781, 819, 917, 978, 1018, 1462, 1543
SchI	GAGTC	6 cut(s)	530, 1295, 1333, 1478, 1769, 2040
ScrFI	CCNGG	5 cut(s)	451, 1259, 1266, 1312, 1660
SduI	GDGCHC	2 cut(s)	291, 492
SfaNI	GCATC	3 cut(s)	1027, 1171, 1198
SfcI	CTRYAG	1 cut(s)	866
Sfr303I	CCGCGG	1 cut(s)	1593
SfuI	TTCGAA	1 cut(s)	1400
SgrBI	CCGCGG	1 cut(s)	1593
SinI	GGWCC	7 cut(s)	16, 509, 772, 1255, 1276, 1330, 1335
SmiMI	CAYNNNNRTG	1 cut(s)	1929
SmlI	CTYRAG	2 cut(s)	209, 893
SmoI	CTYRAG	2 cut(s)	209, 893
Sse9I	AATT	5 cut(s)	88, 740, 1131, 1215, 1402
SseBI	AGGCCT	2 cut(s)	1658, 1732
SspMI	CTAG	3 cut(s)	128, 1641, 1848
SstI	GAGCTC	1 cut(s)	291
StuI	AGGCCT	2 cut(s)	1658, 1732
StyD4I	CCNGG	5 cut(s)	449, 1257, 1264, 1310, 1658
StyI	CCWWGG	1 cut(s)	1438
TaaI	ACNGT	1 cut(s)	957
TaiI	ACGT	1 cut(s)	372
TaqII	GACCGA	2 cut(s)	986, 1264
TasI	AATT	5 cut(s)	88, 740, 1131, 1215, 1402
TatI	WGTACW	2 cut(s)	2146, 2157
TfiI	GAWTC	9 cut(s)	4, 330, 1203, 1478, 1565, 1586, 2005, 2029, 2119
Tru1I	TTAA	4 cut(s)	210, 894, 1130, 1245
Tru9I	TTAA	4 cut(s)	210, 894, 1130, 1245
TscAI	CASTG	3 cut(s)	655, 1194, 1849
TseFI	GTSAC	1 cut(s)	1050
TseI	GCWGC	4 cut(s)	43, 203, 446, 906
Tsp45I	GTSAC	1 cut(s)	1050
TspDTI	ATGAA	4 cut(s)	17, 782, 1250, 1666
TspGWI	ACGGA	2 cut(s)	29, 618
TspRI	CASTG	3 cut(s)	655, 1194, 1849
Vha464I	CTTAAG	2 cut(s)	209, 893
VpaK11BI	GGWCC	7 cut(s)	16, 509, 772, 1255, 1276, 1330, 1335
XapI	RAATTY	3 cut(s)	88, 1215, 1402
XbaI	TCTAGA	1 cut(s)	1640
XceI	RCATGY	1 cut(s)	1928
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1168
XspI	CTAG	3 cut(s)	128, 1641, 1848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.