Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3A

Orthogroup ID

OG0013274

Physical Location & Seq

Genomic Coordinates Forward (+)

10791190 .. 10794726

Gene Structure 3537 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3AG125200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGAATCCCAGCACGGACCCACCAAACCCGCCGCAGCCCCACCGACCCTCTACCTCCTGCGACCGCCACCCCGAAGAGAATTTCACCGGCTTCTGCCCCTCATGCCTCTGCGAACGACTCGCCGTTTTGCACCCTTCAACCACCTCTGCTTCTTCCTCGTCCCGAAAACCACCGACTTCCTCGACCGCCGCCGCTGCCCTTAAGGCCATTTTCAAGCCCCCCATTGGCGGTGGCGGGGCCTCTAGCAAAGCCCGACCCACCACCTCCTTTTTTCCTGAGCTCCGCCGCACCAAGTCGTTCTCCGCCTCCAAAAACGAAGGATTCTCCGGCGTTTTCGAGCCGCAGAGAAAGTCCTGCGACGTTCGCGGCCGGAATACGCTCTGGTGTCTCTTCAATCAGGAGAACCCCAACAAGAAAGAGCAACCCACTTGGGGAGCTGCCGGGCCTGAGACTGAAGTCGAAACCAGAAACTTAGCCGGGCCCTCTTCGAGCTTTCGAGGTCCGGTGTTGGAGTCCAAAGAGGAAGAGGAAGAGGAAGAAGACGAAGAGGAAGAGGAAGAGGAAGAACAAGAACAGAACGACGGAGGAATAGGGAGGATTTCCGACGAACTCAATGCGGGCAATGTCAGTGAAATCAGAGTTCCAGAAATCGTAGAGGAGGAAGAAGAAGACGAAATACAACAGCACCAACTCAACCAACAACAATCAGAGCCACCACTACAATTTCAAGAGGAAGACTTGAAGCCCATGAAGGACCACATAGATCTCGACGCTCAGACCAAGAAGAGAGACCTGAAAGAGATCGCCGGAAGCTTCTGGTCTGCCGCTTCGGTGTTCAGCAAGAAGCTGCAGAAGTGGCGGCAGAAGCAGAAGCTTAAGAAGCGGCGCAACGGCGGCGGATCGGCCACATTGCCCGTCGAGAAGCCCATTGGGCGACAGTTCAGAGAAACCCAGTCGGAGATCGCTGATTACGGCTTCGGTCGGCGCTCGTGCGACACCGATCCCCGGTTTTCGCTTGATGCGGGTCGGATGTCACTCGACGCGGGTCGGATGTCTTTCGACGACCCGAGATACTCTTTCGACGAGCCTCGCGCTTCGTGGGACGGATACCTAATTGGAAGGACTTTTCCGAGAATGCCCACCATGCTCTCGGTGGTGGAGGATGCTCCGGTGGTTGTTTCGAGAATCGATGCTCAAATTCCGGTGGAGGAGCCGATGAATGCTATTAACGAAGAGGACCCGGTTCCTGGCGGGTCGGTCCAGACCCAGAACTACTATTCGGACTCTTCTTCCAGGCGGCGCAAGAGTCTGGACCGCTCCAACTCCATCAGGAAGACGGCGGCGGCGGTGGTGGCTGAGATTGACGAAATGAAGTCGGTTACGAATTCCAAAGTGTCGCCCACTACTGCTGACTACTTCCATGGGCCGAAGCTGGTGGCTCCTGATCGAGAGTCGAGAGATTCTAACTCGAACTCTCTCCGCGATGACTGCTCGGAGACCTTTGAGATGGCGTTTCGCGGCGGCGATCCTGTGCTACGCGGCGGCGATTCGGTGTCTCGCGGCGGGGATTCCGCGGCGTCGGTGGTGGGGAATGGGGAGAGGAAAGATTGTAAGCAGAAGTCTAGAAGGTGGAGCAAGGCCTGGAACATTTGGAGTTTCATACACAGGAGGAGTGGGAACAAGGAGGATGATGAAGATAGGTATAGTAGTAGGCCTAATGGGGTAGAGAGGTCGTTTTCGGAGTCTTGGCCGGAGCTGAGAGGCGGCGGGGAGCGAAATGGGGAAGCAAAGGGTTTCAATCCAAAGATTACGAGGAGCAACAGCAGTGCTAGTTGGAGAAACTCACATAGCTTTGGAGGTGGGGCTTTTGGGAGTATGAGGAAGAATGGTGCTGTTGTTGAGCCACATGTGAATGGAAATGGCAATGCAAATGGGAATGGGAATGTGAATGGGAATGGGAATGGAAGGAAGAAGAAGGAAGAGTTTGTGCTGGAGAGGAATCGGAGCGCAAGGTATTCACCGAATCACATTGACAATGGACTCTTGCGGTTCTACTTGACGCCGATGAGGAACAGCTGGAGGAGTGGAGGAGGAGCTGGGAAGAGCAGGTCGAATCATGCACATTCCATCGCCAGAAGTGTACTCCGATTGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009965 GO:0010016 GO:0010051 GO:0010087 GO:0010088 GO:0010154 GO:0010232 GO:0010233 GO:0010588 GO:0016020 GO:0016324 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0044425 GO:0044459 GO:0044464 GO:0045177 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0061458 GO:0071944 GO:0090698 GO:0098590 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF740

Protein Analysis

718

Amino Acids

79.68

Weight (kDa)

6.53

Isoelectric Point (pI)

65.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF740	PF05340	7 - 693	3.4e-263	Protein of unknown function (DUF740)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38070
fragaria_vesca	FvH4_6g12000
malus_domestica	MD04G1147100.v1.1 MD12G1160400.v1.1
prunus_persica	Prupe.6G270900_v2.0.a1
pyrus_communis	pycom04g13290 pycom12g15220
rosa_chinensis	RchiOBHm_Chr3g0463831
rosa_laevigata	RLG00000024753
rosa_multiflora	Rmu_sc0004796.1_g000009
rosa_roxburghii	Rroxscaffold_6G00399380 Rroxscaffold_6G00416260
rosa_rugosa	Rorug03G0068100
rosa_samantha	Rh3AG125200 Rh3BG129500 Rh3CG132000 Rh3DG130500
rosa_wichuraiana	Rw3G010580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2097
AccBSI	CCGCTC	1 cut(s)	1317
AccII	CGCG	8 cut(s)	366, 1043, 1092, 1482, 1518, 1539, 1560, 1574
AclWI	GGATC	3 cut(s)	907, 995, 1520
AcoI	YGGCCR	3 cut(s)	367, 903, 1748
AcsI	RAATTY	3 cut(s)	79, 1197, 1384
AcuI	CTGAAG	1 cut(s)	474
AcyI	GRCGYC	2 cut(s)	1577, 2060
AfaI	GTAC	2 cut(s)	2142, 2153
AfiI	CCNNNNNNNGG	5 cut(s)	224, 227, 431, 1005, 1247
AflII	CTTAAG	2 cut(s)	200, 875
AflIII	ACRYGT	1 cut(s)	1906
AgsI	TTSAA	6 cut(s)	138, 214, 394, 728, 742, 1798
AjnI	CCWGG	3 cut(s)	1246, 1292, 1640
Alw21I	GWGCWC	1 cut(s)	282
Alw26I	GTCTC	5 cut(s)	392, 443, 783, 1490, 1560
AlwI	GGATC	3 cut(s)	907, 995, 1520
Ama87I	CYCGRG	1 cut(s)	1066
ApaI	GGGCCC	1 cut(s)	483
ApeKI	GCWGC	4 cut(s)	34, 194, 437, 847
ApoI	RAATTY	3 cut(s)	79, 1197, 1384
AspLEI	GCGC	5 cut(s)	888, 987, 1094, 1302, 2009
AsuC2I	CCSGG	4 cut(s)	442, 478, 1006, 1241
AsuHPI	GGTGA	2 cut(s)	76, 2010
AvaI	CYCGRG	1 cut(s)	1066
AvaII	GGWCC	6 cut(s)	16, 500, 754, 1237, 1258, 1312
BaeGI	GKGCMC	1 cut(s)	483
BanII	GRGCYC	2 cut(s)	282, 483
BarI	GAAGNNNNNNTAC	2 cut(s)	660, 692
BauI	CACGAG	1 cut(s)	988
BbsI	GAAGAC	4 cut(s)	546, 675, 741, 1340
Bbv12I	GWGCWC	1 cut(s)	282
BbvI	GCAGC	4 cut(s)	46, 181, 424, 834
BccI	CCATC	3 cut(s)	1334, 1501, 2135
BceAI	ACGGC	4 cut(s)	107, 907, 988, 1353
BcgI	CGANNNNNNTGC	2 cut(s)	596, 630
BciT130I	CCWGG	3 cut(s)	1248, 1294, 1642
BciVI	GTATCC	1 cut(s)	1100
BcnI	CCSGG	4 cut(s)	442, 478, 1006, 1241
BcoDI	GTCTC	5 cut(s)	392, 443, 783, 1490, 1560
BfaI	CTAG	3 cut(s)	243, 1623, 1830
BfmI	CTRYAG	1 cut(s)	848
BfoI	RGCGCY	1 cut(s)	988
BfrI	CTTAAG	2 cut(s)	200, 875
BfuAI	ACCTGC	1 cut(s)	2097
BfuI	GTATCC	1 cut(s)	1100
BglI	GCCNNNNNGGC	2 cut(s)	203, 931
BglII	AGATCT	1 cut(s)	763
Bme1390I	CCNGG	7 cut(s)	442, 478, 1006, 1241, 1248, 1294, 1642
Bme18I	GGWCC	6 cut(s)	16, 500, 754, 1237, 1258, 1312
BmeT110I	CYCGRG	1 cut(s)	1066
BmiI	GGNNCC	7 cut(s)	18, 238, 481, 1212, 1239, 1245, 1440
BmrFI	CCNGG	7 cut(s)	442, 478, 1006, 1241, 1248, 1294, 1642
BmrI	ACTGGG	1 cut(s)	946
BmsI	GCATC	3 cut(s)	1009, 1153, 1180
BmuI	ACTGGG	1 cut(s)	946
BoxI	GACNNNNGTC	2 cut(s)	455, 1044
BpiI	GAAGAC	4 cut(s)	546, 675, 741, 1340
BpmI	CTGGAG	2 cut(s)	2012, 2098
Bpu10I	CCTNAGC	1 cut(s)	276
BpuMI	CCSGG	4 cut(s)	442, 478, 1006, 1241
Bsa29I	ATCGAT	1 cut(s)	1188
BsaHI	GRCGYC	2 cut(s)	1577, 2060
BsaI	GGTCTC	2 cut(s)	783, 1490
BsaJI	CCNNGG	3 cut(s)	1004, 1420, 1572
BsaWI	WCCGGW	3 cut(s)	502, 1168, 1201
Bsc4I	CCNNNNNNNGG	5 cut(s)	224, 227, 431, 1005, 1247
Bse118I	RCCGGY	1 cut(s)	86
Bse1I	ACTGG	1 cut(s)	952
Bse3DI	GCAATG	3 cut(s)	628, 908, 1930
BseBI	CCWGG	3 cut(s)	1248, 1294, 1642
BseCI	ATCGAT	1 cut(s)	1188
BseDI	CCNNGG	3 cut(s)	1004, 1420, 1572
BseGI	GGATG	4 cut(s)	1035, 1056, 1168, 1693
BseLI	CCNNNNNNNGG	5 cut(s)	224, 227, 431, 1005, 1247
BseMI	GCAATG	3 cut(s)	628, 908, 1930
BseMII	CTCAG	5 cut(s)	267, 438, 788, 1347, 1748
BseNI	ACTGG	1 cut(s)	952
BseRI	GAGGAG	7 cut(s)	671, 1223, 1684, 1828, 2095, 2103, 2106
BseSI	GKGCMC	1 cut(s)	483
BseX3I	CGGCCG	1 cut(s)	367
BseXI	GCAGC	4 cut(s)	46, 181, 424, 834
BseYI	CCCAGC	2 cut(s)	8, 2096
Bsh1236I	CGCG	8 cut(s)	366, 1043, 1092, 1482, 1518, 1539, 1560, 1574
Bsh1285I	CGRYCG	4 cut(s)	64, 186, 370, 982
BshVI	ATCGAT	1 cut(s)	1188
BsiEI	CGRYCG	4 cut(s)	64, 186, 370, 982
BsiHKAI	GWGCWC	1 cut(s)	282
BsiHKCI	CYCGRG	1 cut(s)	1066
BslFI	GGGAC	2 cut(s)	145, 1115
BslI	CCNNNNNNNGG	5 cut(s)	224, 227, 431, 1005, 1247
BsmAI	GTCTC	5 cut(s)	392, 443, 783, 1490, 1560
BsmFI	GGGAC	2 cut(s)	145, 1115
BsmI	GAATGC	2 cut(s)	1140, 1225
Bso31I	GGTCTC	2 cut(s)	783, 1490
BsoBI	CYCGRG	1 cut(s)	1066
Bsp120I	GGGCCC	1 cut(s)	479
Bsp1286I	GDGCHC	2 cut(s)	282, 483
Bsp143I	GATC	7 cut(s)	763, 801, 899, 960, 1000, 1444, 1525
Bsp19I	CCATGG	1 cut(s)	1420
BspCNI	CTCAG	5 cut(s)	268, 439, 787, 1348, 1749
BspDI	ATCGAT	1 cut(s)	1188
BspFNI	CGCG	8 cut(s)	366, 1043, 1092, 1482, 1518, 1539, 1560, 1574
BspLI	GGNNCC	7 cut(s)	18, 238, 481, 1212, 1239, 1245, 1440
BspMAI	CTGCAG	1 cut(s)	852
BspMI	ACCTGC	1 cut(s)	2097
BspPI	GGATC	3 cut(s)	907, 995, 1520
BspQI	GCTCTTC	1 cut(s)	2096
BspTI	CTTAAG	2 cut(s)	200, 875
BspTNI	GGTCTC	2 cut(s)	783, 1490
BsrBI	CCGCTC	1 cut(s)	1317
BsrDI	GCAATG	3 cut(s)	628, 908, 1930
BsrFI	RCCGGY	1 cut(s)	86
BsrI	ACTGG	1 cut(s)	952
BssAI	RCCGGY	1 cut(s)	86
BssECI	CCNNGG	3 cut(s)	1004, 1420, 1572
BssMI	GATC	7 cut(s)	763, 801, 899, 960, 1000, 1444, 1525
BssNI	GRCGYC	2 cut(s)	1577, 2060
BssSI	CACGAG	1 cut(s)	988
BssT1I	CCWWGG	1 cut(s)	1420
Bst2BI	CACGAG	1 cut(s)	988
Bst2UI	CCWGG	3 cut(s)	1248, 1294, 1642
Bst4CI	ACNGT	1 cut(s)	939
BstACI	GRCGYC	2 cut(s)	1577, 2060
BstAFI	CTTAAG	2 cut(s)	200, 875
BstC8I	GCNNGC	1 cut(s)	619
BstDEI	CTNAG	6 cut(s)	276, 447, 472, 774, 1356, 1757
BstDSI	CCRYGG	2 cut(s)	1420, 1572
BstF5I	GGATG	4 cut(s)	1035, 1056, 1168, 1693
BstFNI	CGCG	8 cut(s)	366, 1043, 1092, 1482, 1518, 1539, 1560, 1574
BstH2I	RGCGCY	1 cut(s)	988
BstHHI	GCGC	5 cut(s)	888, 987, 1094, 1302, 2009
BstKTI	GATC	7 cut(s)	766, 804, 902, 963, 1003, 1447, 1528
BstMAI	GTCTC	5 cut(s)	392, 443, 783, 1490, 1560
BstMBI	GATC	7 cut(s)	763, 801, 899, 960, 1000, 1444, 1525
BstMCI	CGRYCG	4 cut(s)	64, 186, 370, 982
BstNI	CCWGG	3 cut(s)	1248, 1294, 1642
BstNSI	RCATGY	1 cut(s)	1910
BstPAI	GACNNNNGTC	2 cut(s)	455, 1044
BstSCI	CCNGG	7 cut(s)	440, 476, 1004, 1239, 1246, 1292, 1640
BstSFI	CTRYAG	1 cut(s)	848
BstSLI	GKGCMC	1 cut(s)	483
BstUI	CGCG	8 cut(s)	366, 1043, 1092, 1482, 1518, 1539, 1560, 1574
BstV1I	GCAGC	4 cut(s)	46, 181, 424, 834
BstV2I	GAAGAC	4 cut(s)	546, 675, 741, 1340
BstX2I	RGATCY	1 cut(s)	763
BstYI	RGATCY	1 cut(s)	763
BstZI	CGGCCG	1 cut(s)	367
Bsu15I	ATCGAT	1 cut(s)	1188
BsuI	GTATCC	1 cut(s)	1100
BsuTUI	ATCGAT	1 cut(s)	1188
BtgI	CCRYGG	2 cut(s)	1420, 1572
BtgZI	GCGATG	2 cut(s)	1497, 2113
BtsCI	GGATG	4 cut(s)	1035, 1056, 1168, 1693
BtsI	GCAGTG	1 cut(s)	1831
BtsIMutI	CAGTG	2 cut(s)	634, 1831
BveI	ACCTGC	1 cut(s)	2097
Cac8I	GCNNGC	1 cut(s)	619
CfoI	GCGC	5 cut(s)	888, 987, 1094, 1302, 2009
Cfr10I	RCCGGY	1 cut(s)	86
Cfr42I	CCGCGG	1 cut(s)	1575
ClaI	ATCGAT	1 cut(s)	1188
CseI	GACGC	4 cut(s)	779, 1049, 1566, 2068
Csp6I	GTAC	2 cut(s)	2141, 2152
CviAII	CATG	6 cut(s)	102, 748, 1144, 1421, 1907, 2117
CviQI	GTAC	2 cut(s)	2141, 2152
DdeI	CTNAG	6 cut(s)	276, 447, 472, 774, 1356, 1757
DpnI	GATC	7 cut(s)	765, 803, 901, 962, 1002, 1446, 1527
DpnII	GATC	7 cut(s)	763, 801, 899, 960, 1000, 1444, 1525
EaeI	YGGCCR	3 cut(s)	367, 903, 1748
EagI	CGGCCG	1 cut(s)	367
EciI	GGCGGA	3 cut(s)	272, 292, 912
Ecl136II	GAGCTC	1 cut(s)	280
EclXI	CGGCCG	1 cut(s)	367
Eco130I	CCWWGG	1 cut(s)	1420
Eco147I	AGGCCT	2 cut(s)	1640, 1714
Eco24I	GRGCYC	2 cut(s)	282, 483
Eco31I	GGTCTC	2 cut(s)	783, 1490
Eco47I	GGWCC	6 cut(s)	16, 500, 754, 1237, 1258, 1312
Eco52I	CGGCCG	1 cut(s)	367
Eco53kI	GAGCTC	1 cut(s)	280
Eco57I	CTGAAG	1 cut(s)	474
Eco88I	CYCGRG	1 cut(s)	1066
EcoICRI	GAGCTC	1 cut(s)	280
EcoO109I	RGGNCCY	3 cut(s)	237, 480, 1237
EcoRI	GAATTC	1 cut(s)	1384
EcoRII	CCWGG	3 cut(s)	1246, 1292, 1640
EcoT14I	CCWWGG	1 cut(s)	1420
EcoT38I	GRGCYC	2 cut(s)	282, 483
ErhI	CCWWGG	1 cut(s)	1420
FaeI	CATG	6 cut(s)	105, 751, 1147, 1424, 1910, 2120
FaqI	GGGAC	2 cut(s)	145, 1115
FatI	CATG	6 cut(s)	101, 747, 1143, 1420, 1906, 2116
FauI	CCCGC	8 cut(s)	36, 227, 610, 1015, 1036, 1244, 1556, 1760
FokI	GGATG	4 cut(s)	1042, 1063, 1175, 1700
FriOI	GRGCYC	2 cut(s)	282, 483
FspBI	CTAG	3 cut(s)	243, 1623, 1830
GlaI	GCGC	5 cut(s)	887, 986, 1093, 1301, 2008
GsaI	CCCAGC	2 cut(s)	12, 2100
GsuI	CTGGAG	2 cut(s)	2012, 2098
HaeII	RGCGCY	1 cut(s)	988
HgaI	GACGC	4 cut(s)	779, 1049, 1566, 2068
HhaI	GCGC	5 cut(s)	888, 987, 1094, 1302, 2009
Hin1I	GRCGYC	2 cut(s)	1577, 2060
Hin1II	CATG	6 cut(s)	105, 751, 1147, 1424, 1910, 2120
Hin6I	GCGC	5 cut(s)	886, 985, 1092, 1300, 2007
HinP1I	GCGC	5 cut(s)	886, 985, 1092, 1300, 2007
HindIII	AAGCTT	2 cut(s)	811, 872
HphI	GGTGA	2 cut(s)	76, 2010
Hpy166II	GTNNAC	1 cut(s)	2141
Hpy8I	GTNNAC	1 cut(s)	2141
Hpy99I	CGWCG	9 cut(s)	362, 584, 608, 773, 920, 1043, 1064, 1085, 1582
HpyAV	CCTTC	7 cut(s)	144, 311, 745, 1113, 1620, 1959, 1969
HpyCH4III	ACNGT	1 cut(s)	939
HpyCH4IV	ACGT	1 cut(s)	360
HpyCH4V	TGCA	4 cut(s)	130, 850, 1928, 2120
HpyF3I	CTNAG	6 cut(s)	276, 447, 472, 774, 1356, 1757
HpySE526I	ACGT	1 cut(s)	360
Hsp92I	GRCGYC	2 cut(s)	1577, 2060
Hsp92II	CATG	6 cut(s)	105, 751, 1147, 1424, 1910, 2120
HspAI	GCGC	5 cut(s)	886, 985, 1092, 1300, 2007
KspI	CCGCGG	1 cut(s)	1575
Kzo9I	GATC	7 cut(s)	763, 801, 899, 960, 1000, 1444, 1525
LguI	GCTCTTC	1 cut(s)	2096
Lsp1109I	GCAGC	4 cut(s)	46, 181, 424, 834
LweI	GCATC	3 cut(s)	1009, 1153, 1180
MaeI	CTAG	3 cut(s)	243, 1623, 1830
MaeII	ACGT	1 cut(s)	360
MaeIII	GTNAC	2 cut(s)	1032, 1378
MalI	GATC	7 cut(s)	765, 803, 901, 962, 1002, 1446, 1527
MbiI	CCGCTC	1 cut(s)	1317
MboI	GATC	7 cut(s)	763, 801, 899, 960, 1000, 1444, 1525
MflI	RGATCY	1 cut(s)	763
MhlI	GDGCHC	2 cut(s)	282, 483
MluCI	AATT	5 cut(s)	79, 722, 1113, 1197, 1384
MlyI	GAGTC	7 cut(s)	111, 521, 1277, 1315, 1460, 1751, 2034
MmeI	TCCRAC	7 cut(s)	489, 627, 936, 1007, 1028, 1344, 1814
MseI	TTAA	3 cut(s)	201, 876, 1227
MslI	CAYNNNNRTG	1 cut(s)	1911
MspA1I	CMGCKG	3 cut(s)	194, 1574, 2076
MspCI	CTTAAG	2 cut(s)	200, 875
MspR9I	CCNGG	7 cut(s)	442, 478, 1006, 1241, 1248, 1294, 1642
Mva1269I	GAATGC	2 cut(s)	1140, 1225
MvaI	CCWGG	3 cut(s)	1248, 1294, 1642
MvnI	CGCG	8 cut(s)	366, 1043, 1092, 1482, 1518, 1539, 1560, 1574
NciI	CCSGG	4 cut(s)	442, 478, 1006, 1241
NcoI	CCATGG	1 cut(s)	1420
NdeII	GATC	7 cut(s)	763, 801, 899, 960, 1000, 1444, 1525
NlaIII	CATG	6 cut(s)	105, 751, 1147, 1424, 1910, 2120
NlaIV	GGNNCC	7 cut(s)	18, 238, 481, 1212, 1239, 1245, 1440
NmuCI	GTSAC	1 cut(s)	1032
NspI	RCATGY	1 cut(s)	1910
PceI	AGGCCT	2 cut(s)	1640, 1714
PciI	ACATGT	1 cut(s)	1906
PciSI	GCTCTTC	1 cut(s)	2096
PctI	GAATGC	2 cut(s)	1140, 1225
PfeI	GAWTC	9 cut(s)	4, 321, 1185, 1460, 1547, 1568, 1999, 2023, 2113
PleI	GAGTC	7 cut(s)	111, 520, 1277, 1314, 1459, 1750, 2034
PpsI	GAGTC	7 cut(s)	111, 520, 1277, 1314, 1459, 1750, 2034
PpuMI	RGGWCCY	1 cut(s)	1237
PscI	ACATGT	1 cut(s)	1906
PshAI	GACNNNNGTC	2 cut(s)	455, 1044
Psp124BI	GAGCTC	1 cut(s)	282
Psp5II	RGGWCCY	1 cut(s)	1237
Psp6I	CCWGG	3 cut(s)	1246, 1292, 1640
PspFI	CCCAGC	2 cut(s)	8, 2096
PspGI	CCWGG	3 cut(s)	1246, 1292, 1640
PspN4I	GGNNCC	7 cut(s)	18, 238, 481, 1212, 1239, 1245, 1440
PspOMI	GGGCCC	1 cut(s)	479
PspPPI	RGGWCCY	1 cut(s)	1237
PstI	CTGCAG	1 cut(s)	852
PsuI	RGATCY	1 cut(s)	763
PvuII	CAGCTG	1 cut(s)	2076
RsaI	GTAC	2 cut(s)	2142, 2153
RsaNI	GTAC	2 cut(s)	2141, 2152
RseI	CAYNNNNRTG	1 cut(s)	1911
SacI	GAGCTC	1 cut(s)	282
SacII	CCGCGG	1 cut(s)	1575
SapI	GCTCTTC	1 cut(s)	2096
SaqAI	TTAA	3 cut(s)	201, 876, 1227
Sau3AI	GATC	7 cut(s)	763, 801, 899, 960, 1000, 1444, 1525
SchI	GAGTC	7 cut(s)	111, 521, 1277, 1315, 1460, 1751, 2034
ScrFI	CCNGG	7 cut(s)	442, 478, 1006, 1241, 1248, 1294, 1642
SduI	GDGCHC	2 cut(s)	282, 483
SfaNI	GCATC	3 cut(s)	1009, 1153, 1180
SfcI	CTRYAG	1 cut(s)	848
Sfr303I	CCGCGG	1 cut(s)	1575
SgrBI	CCGCGG	1 cut(s)	1575
SinI	GGWCC	6 cut(s)	16, 500, 754, 1237, 1258, 1312
SmiMI	CAYNNNNRTG	1 cut(s)	1911
SmlI	CTYRAG	2 cut(s)	200, 875
SmoI	CTYRAG	2 cut(s)	200, 875
Sse9I	AATT	5 cut(s)	79, 722, 1113, 1197, 1384
SseBI	AGGCCT	2 cut(s)	1640, 1714
SspMI	CTAG	3 cut(s)	243, 1623, 1830
SstI	GAGCTC	1 cut(s)	282
StuI	AGGCCT	2 cut(s)	1640, 1714
StyD4I	CCNGG	7 cut(s)	440, 476, 1004, 1239, 1246, 1292, 1640
StyI	CCWWGG	1 cut(s)	1420
TaaI	ACNGT	1 cut(s)	939
TaiI	ACGT	1 cut(s)	363
TaqII	GACCGA	2 cut(s)	968, 1246
TasI	AATT	5 cut(s)	79, 722, 1113, 1197, 1384
TatI	WGTACW	2 cut(s)	2140, 2151
TfiI	GAWTC	9 cut(s)	4, 321, 1185, 1460, 1547, 1568, 1999, 2023, 2113
Tru1I	TTAA	3 cut(s)	201, 876, 1227
Tru9I	TTAA	3 cut(s)	201, 876, 1227
TscAI	CASTG	2 cut(s)	634, 1831
TseFI	GTSAC	1 cut(s)	1032
TseI	GCWGC	4 cut(s)	34, 194, 437, 847
Tsp45I	GTSAC	1 cut(s)	1032
TspDTI	ATGAA	6 cut(s)	17, 764, 1232, 1385, 1648, 1707
TspGWI	ACGGA	3 cut(s)	29, 597, 1119
TspRI	CASTG	2 cut(s)	634, 1831
Vha464I	CTTAAG	2 cut(s)	200, 875
VpaK11BI	GGWCC	6 cut(s)	16, 500, 754, 1237, 1258, 1312
XapI	RAATTY	3 cut(s)	79, 1197, 1384
XbaI	TCTAGA	1 cut(s)	1622
XceI	RCATGY	1 cut(s)	1910
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1150
XspI	CTAG	3 cut(s)	243, 1623, 1830

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.