Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0013274

Physical Location & Seq

Genomic Coordinates Reverse (-)

38768902 .. 38771061

Gene Structure 2160 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000024753

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2160 bp

ATGAATCCCAGCACGGACCCACCACCACCACCAAACCCGCCGCAGCCCCACCGACCCTCTACCTCCTGCGACCGCCACCCCGAAGAGAATTTCACCGGCTTCTGCCCCTCATGCCTCTGCGAACGACTAGCCGTTTTGCACCCTGCAACCACCTCTGCTTCTTCCTCGTCCCGAAAACCACCGACTTCCTCGACCGCCGCCGCTGCCCTTAAGGCCATTTTCAAGCCCCCCATTGGCGGTGGCGGGGCCTCCAGCAAAGCCCGACCAACCACCTCCTTTTTTCCTGAGCTCCGCCGCACCAAGTCGTTCTCCGCCTCCAAAAACGAAGGATTCTCCGGCGTTTTCGAGCCACAGAGAAAGTCCTGCGACGTTCGCGGCCGGAATACGCTCTGGTGTCTTTTTAATCAGGAGAACCCCAACAAGAAAGAGCAACCCACTTGGGGAGCTGCCGGGCCTGAGACTGAAGTCGAAACCAGAAACTTAGCTGGGCCCTCTTCGAGCTTTCGAGGTCCGGTGTTCGAGTCCAAAGAGGAAGAAGAAGAAGACGACGACGAAGAGGAAGAGGAAGAGGAAGAGGAAGAACAGAACCAGAAACAGAACGACGGAGGAATAGGGAGGATTTCCGACGAACTCAATGTGGGCAATGTCAGTGAAATCAGAGTTCCAGAAATCGTAGAGGAGGAAGAAGAAGACGAAATACAACAGCACCAACTCAACCAACAACAACAATCAGAGCCACTACAATTTCAAGAGGAAGACTTGAAGCCCATGAAGGACCACATAGATCTCGACGGTCAGACCAAGAAGAGAGACCTGAAAGAGATCGCCGGAAGCTTCTGGTCCGCCGCTTCGGTGTTCAGCAAGAAACTGCAGAAGTGGCGGCAGAAGCAGAAGCTTAAGAAGCGGCGCAACGGCGGCGGATCGGCCACATTGCCCGTCGAGAAGCCCATTGGGCGACAGTTCAGAGAAACCCAGTCGGAGATCGCCGATTACGGCTTCGGTCGGCGCTCATGCGACACCGATCCCCGGTTTTCGCTCGATGCGGGTCGGATGTCACTCGACGCGGGTCGGATGTCTTTCGACGACCCGAGATACTCTTTCGACGAGCCTCGCGCTTCGTGGGACGGGTACCTAATTGGAAGGACTTTTCCGAGAATGCCCACCATGCTCTCGGTGGTGGAGGATGCTCCGGTGGTTGTTTCGAGAATCGATGCTCAAATTCCGGTGGAGGAGCCGATGAATGCTATTAACGAAGAGGACCCGGTTCCTGGCGGGTCGCTCCAGACCCAGAACTACTATTCGGACTCTTCTTCCAGGCGGCGCAAGAGTCTGGACCGGTCCAACTCCATCAGGAAGACGGCGGCGGCGGTGGTGGCTGAGATTGACGAAATGAAGTCGGTTTCGAATTCCAAAGTGTCGCCCACTACTGCCGACTACTTCCATGGGCCGAAGCTGGTGGCTCCTGATCGAGAGTCGAGAGATTCTAACTCGAACTCTCTCCGCGATGACTGCTCGGAGACCTTTGAGATGGCGTTTCGCGGCGGCGATCCTGTGCTACGCGGCGGCGATTCGGTGTCTCGCGGTGGGGATTCGGCGGCGTCGGTTGTTGGGAATGGGGAGAGGAAAGATTGTAAGCAGAAGTCTAGAAGGTGGAGCAAGGCCTGGAACATTTGGAGTTTCATACACAAGAGGAGTGGGAACAAGGAGGATGATGAGGATAGGTATAGTAGTAGGCCTAATGGGGTAGAGAGGTCGTTTTCGGAGTCTTGGCCGGAGCTGAGAGGCGGCGGGGAGCGAAATGGGGAAGCAAAGGGTTTCAATCCAAAGATTACGAGGAGCAACAGCAGTGCTAGTTGGAGAAACTCACATAGCTTTGGAGGTGGGGCTTTTGGGAGTATGAGGAAGAATGGTGCTGTTGTTGAGCCACATGTGAATGGAAATGGCAATGCAAATGGGAATGGGAATGGAAGGAAGAAGAAGGAAGAGTTTGTGCTGGAGAGGAATCGGAGCGCAAGGTATTCACCGAATCACATTGACAATGGACTCTTGCGGTTCTACTTGACACCGATGAGGAACAGCTGGAGGAGTGGAGGAGGAGCTGGGAAGAGCAGGTCGAATCATGCACATTCCATCGCCAGAAGTGTACTCCGATTGTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003002 GO:0003006 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0007389 GO:0008150 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009965 GO:0010016 GO:0010051 GO:0010087 GO:0010088 GO:0010154 GO:0010232 GO:0010233 GO:0010588 GO:0016020 GO:0016324 GO:0022414 GO:0022622 GO:0032501 GO:0032502 GO:0044425 GO:0044459 GO:0044464 GO:0045177 GO:0048316 GO:0048366 GO:0048367 GO:0048598 GO:0048608 GO:0048731 GO:0048825 GO:0048826 GO:0048827 GO:0048856 GO:0051179 GO:0051234 GO:0061458 GO:0071944 GO:0090698 GO:0098590 GO:0099402 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF740

Protein Analysis

720

Amino Acids

79.92

Weight (kDa)

6.53

Isoelectric Point (pI)

67.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF740	PF05340	10 - 694	2.7e-263	Protein of unknown function (DUF740)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0013274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38070
fragaria_vesca	FvH4_6g12000
malus_domestica	MD04G1147100.v1.1 MD12G1160400.v1.1
prunus_persica	Prupe.6G270900_v2.0.a1
pyrus_communis	pycom04g13290 pycom12g15220
rosa_chinensis	RchiOBHm_Chr3g0463831
rosa_laevigata	RLG00000024753
rosa_multiflora	Rmu_sc0004796.1_g000009
rosa_roxburghii	Rroxscaffold_6G00399380 Rroxscaffold_6G00416260
rosa_rugosa	Rorug03G0068100
rosa_samantha	Rh3AG125200 Rh3BG129500 Rh3CG132000 Rh3DG130500
rosa_wichuraiana	Rw3G010580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2100
Acc65I	GGTACC	1 cut(s)	1128
AccB1I	GGYRCC	1 cut(s)	1128
AccII	CGCG	7 cut(s)	375, 1064, 1113, 1503, 1539, 1560, 1581
AclWI	GGATC	3 cut(s)	928, 1016, 1541
AcoI	YGGCCR	3 cut(s)	376, 924, 1769
AcsI	RAATTY	3 cut(s)	88, 1218, 1405
AcuI	CTGAAG	1 cut(s)	483
AcyI	GRCGYC	1 cut(s)	1598
AfaI	GTAC	3 cut(s)	1130, 2145, 2156
AfiI	CCNNNNNNNGG	5 cut(s)	233, 236, 440, 1026, 1268
AflII	CTTAAG	2 cut(s)	209, 896
AflIII	ACRYGT	1 cut(s)	1927
AgeI	ACCGGT	1 cut(s)	1335
AgsI	TTSAA	4 cut(s)	223, 749, 763, 1819
AjnI	CCWGG	3 cut(s)	1267, 1313, 1661
Alw21I	GWGCWC	1 cut(s)	291
Alw26I	GTCTC	4 cut(s)	452, 804, 1511, 1581
AlwI	GGATC	3 cut(s)	928, 1016, 1541
Ama87I	CYCGRG	1 cut(s)	1087
ApaI	GGGCCC	1 cut(s)	492
ApeKI	GCWGC	3 cut(s)	43, 203, 446
ApoI	RAATTY	3 cut(s)	88, 1218, 1405
AsiGI	ACCGGT	1 cut(s)	1335
Asp718I	GGTACC	1 cut(s)	1128
AspLEI	GCGC	5 cut(s)	909, 1008, 1115, 1323, 2012
AsuC2I	CCSGG	3 cut(s)	451, 1027, 1262
AsuHPI	GGTGA	2 cut(s)	85, 2013
AsuII	TTCGAA	1 cut(s)	1403
AvaI	CYCGRG	1 cut(s)	1087
AvaII	GGWCC	7 cut(s)	16, 509, 775, 840, 1258, 1333, 1338
BaeGI	GKGCMC	1 cut(s)	492
BanI	GGYRCC	1 cut(s)	1128
BanII	GRGCYC	2 cut(s)	291, 492
BarI	GAAGNNNNNNTAC	2 cut(s)	681, 713
BbsI	GAAGAC	4 cut(s)	549, 696, 762, 1361
Bbv12I	GWGCWC	1 cut(s)	291
BbvI	GCAGC	3 cut(s)	55, 190, 433
BccI	CCATC	3 cut(s)	1355, 1522, 2138
BceAI	ACGGC	4 cut(s)	116, 928, 1009, 1374
BciT130I	CCWGG	3 cut(s)	1269, 1315, 1663
BcnI	CCSGG	3 cut(s)	451, 1027, 1262
BcoDI	GTCTC	4 cut(s)	452, 804, 1511, 1581
BfaI	CTAG	3 cut(s)	128, 1644, 1851
BfmI	CTRYAG	1 cut(s)	869
BfoI	RGCGCY	1 cut(s)	1009
BfrI	CTTAAG	2 cut(s)	209, 896
BfuAI	ACCTGC	1 cut(s)	2100
BglI	GCCNNNNNGGC	2 cut(s)	212, 952
BglII	AGATCT	1 cut(s)	784
Bme1390I	CCNGG	6 cut(s)	451, 1027, 1262, 1269, 1315, 1663
Bme18I	GGWCC	7 cut(s)	16, 509, 775, 840, 1258, 1333, 1338
BmeT110I	CYCGRG	1 cut(s)	1087
BmiI	GGNNCC	8 cut(s)	18, 247, 490, 1130, 1233, 1260, 1266, 1461
BmrFI	CCNGG	6 cut(s)	451, 1027, 1262, 1269, 1315, 1663
BmrI	ACTGGG	1 cut(s)	967
BmsI	GCATC	3 cut(s)	1030, 1174, 1201
BmuI	ACTGGG	1 cut(s)	967
BoxI	GACNNNNGTC	2 cut(s)	464, 1065
BpiI	GAAGAC	4 cut(s)	549, 696, 762, 1361
BpmI	CTGGAG	4 cut(s)	235, 1265, 2015, 2101
Bpu10I	CCTNAGC	1 cut(s)	285
Bpu14I	TTCGAA	1 cut(s)	1403
BpuMI	CCSGG	3 cut(s)	451, 1027, 1262
Bsa29I	ATCGAT	1 cut(s)	1209
BsaHI	GRCGYC	1 cut(s)	1598
BsaI	GGTCTC	2 cut(s)	804, 1511
BsaJI	CCNNGG	2 cut(s)	1025, 1441
BsaWI	WCCGGW	4 cut(s)	511, 1189, 1222, 1335
Bsc4I	CCNNNNNNNGG	5 cut(s)	233, 236, 440, 1026, 1268
Bse118I	RCCGGY	2 cut(s)	95, 1335
Bse1I	ACTGG	1 cut(s)	973
Bse3DI	GCAATG	3 cut(s)	649, 929, 1951
BseBI	CCWGG	3 cut(s)	1269, 1315, 1663
BseCI	ATCGAT	1 cut(s)	1209
BseDI	CCNNGG	2 cut(s)	1025, 1441
BseGI	GGATG	4 cut(s)	1056, 1077, 1189, 1714
BseLI	CCNNNNNNNGG	5 cut(s)	233, 236, 440, 1026, 1268
BseMI	GCAATG	3 cut(s)	649, 929, 1951
BseMII	CTCAG	4 cut(s)	276, 447, 1368, 1769
BseNI	ACTGG	1 cut(s)	973
BseRI	GAGGAG	7 cut(s)	692, 1244, 1705, 1849, 2098, 2106, 2109
BseSI	GKGCMC	1 cut(s)	492
BseX3I	CGGCCG	1 cut(s)	376
BseXI	GCAGC	3 cut(s)	55, 190, 433
BseYI	CCCAGC	3 cut(s)	8, 485, 2099
Bsh1236I	CGCG	7 cut(s)	375, 1064, 1113, 1503, 1539, 1560, 1581
Bsh1285I	CGRYCG	4 cut(s)	73, 195, 379, 1003
BshNI	GGYRCC	1 cut(s)	1128
BshTI	ACCGGT	1 cut(s)	1335
BshVI	ATCGAT	1 cut(s)	1209
BsiEI	CGRYCG	4 cut(s)	73, 195, 379, 1003
BsiHKAI	GWGCWC	1 cut(s)	291
BsiHKCI	CYCGRG	1 cut(s)	1087
BslFI	GGGAC	2 cut(s)	154, 1136
BslI	CCNNNNNNNGG	5 cut(s)	233, 236, 440, 1026, 1268
BsmAI	GTCTC	4 cut(s)	452, 804, 1511, 1581
BsmFI	GGGAC	2 cut(s)	154, 1136
BsmI	GAATGC	2 cut(s)	1161, 1246
Bso31I	GGTCTC	2 cut(s)	804, 1511
BsoBI	CYCGRG	1 cut(s)	1087
Bsp119I	TTCGAA	1 cut(s)	1403
Bsp120I	GGGCCC	1 cut(s)	488
Bsp1286I	GDGCHC	2 cut(s)	291, 492
Bsp143I	GATC	7 cut(s)	784, 822, 920, 981, 1021, 1465, 1546
Bsp19I	CCATGG	1 cut(s)	1441
BspCNI	CTCAG	4 cut(s)	277, 448, 1369, 1770
BspDI	ATCGAT	1 cut(s)	1209
BspFNI	CGCG	7 cut(s)	375, 1064, 1113, 1503, 1539, 1560, 1581
BspLI	GGNNCC	8 cut(s)	18, 247, 490, 1130, 1233, 1260, 1266, 1461
BspMAI	CTGCAG	1 cut(s)	873
BspMI	ACCTGC	1 cut(s)	2100
BspPI	GGATC	3 cut(s)	928, 1016, 1541
BspQI	GCTCTTC	1 cut(s)	2099
BspT104I	TTCGAA	1 cut(s)	1403
BspT107I	GGYRCC	1 cut(s)	1128
BspTI	CTTAAG	2 cut(s)	209, 896
BspTNI	GGTCTC	2 cut(s)	804, 1511
BsrDI	GCAATG	3 cut(s)	649, 929, 1951
BsrFI	RCCGGY	2 cut(s)	95, 1335
BsrI	ACTGG	1 cut(s)	973
BssAI	RCCGGY	2 cut(s)	95, 1335
BssECI	CCNNGG	2 cut(s)	1025, 1441
BssMI	GATC	7 cut(s)	784, 822, 920, 981, 1021, 1465, 1546
BssNI	GRCGYC	1 cut(s)	1598
BssT1I	CCWWGG	1 cut(s)	1441
Bst2UI	CCWGG	3 cut(s)	1269, 1315, 1663
Bst4CI	ACNGT	2 cut(s)	794, 960
BstACI	GRCGYC	1 cut(s)	1598
BstAFI	CTTAAG	2 cut(s)	209, 896
BstBI	TTCGAA	1 cut(s)	1403
BstDEI	CTNAG	5 cut(s)	285, 456, 481, 1377, 1778
BstDSI	CCRYGG	1 cut(s)	1441
BstF5I	GGATG	4 cut(s)	1056, 1077, 1189, 1714
BstFNI	CGCG	7 cut(s)	375, 1064, 1113, 1503, 1539, 1560, 1581
BstH2I	RGCGCY	1 cut(s)	1009
BstHHI	GCGC	5 cut(s)	909, 1008, 1115, 1323, 2012
BstKTI	GATC	7 cut(s)	787, 825, 923, 984, 1024, 1468, 1549
BstMAI	GTCTC	4 cut(s)	452, 804, 1511, 1581
BstMBI	GATC	7 cut(s)	784, 822, 920, 981, 1021, 1465, 1546
BstMCI	CGRYCG	4 cut(s)	73, 195, 379, 1003
BstNI	CCWGG	3 cut(s)	1269, 1315, 1663
BstNSI	RCATGY	1 cut(s)	1931
BstPAI	GACNNNNGTC	2 cut(s)	464, 1065
BstSCI	CCNGG	6 cut(s)	449, 1025, 1260, 1267, 1313, 1661
BstSFI	CTRYAG	1 cut(s)	869
BstSLI	GKGCMC	1 cut(s)	492
BstUI	CGCG	7 cut(s)	375, 1064, 1113, 1503, 1539, 1560, 1581
BstV1I	GCAGC	3 cut(s)	55, 190, 433
BstV2I	GAAGAC	4 cut(s)	549, 696, 762, 1361
BstX2I	RGATCY	1 cut(s)	784
BstYI	RGATCY	1 cut(s)	784
BstZI	CGGCCG	1 cut(s)	376
Bsu15I	ATCGAT	1 cut(s)	1209
BsuTUI	ATCGAT	1 cut(s)	1209
BtgI	CCRYGG	1 cut(s)	1441
BtgZI	GCGATG	2 cut(s)	1518, 2116
BtsCI	GGATG	4 cut(s)	1056, 1077, 1189, 1714
BtsI	GCAGTG	1 cut(s)	1852
BtsIMutI	CAGTG	2 cut(s)	655, 1852
BveI	ACCTGC	1 cut(s)	2100
CfoI	GCGC	5 cut(s)	909, 1008, 1115, 1323, 2012
Cfr10I	RCCGGY	2 cut(s)	95, 1335
ClaI	ATCGAT	1 cut(s)	1209
CseI	GACGC	2 cut(s)	1070, 1587
Csp6I	GTAC	3 cut(s)	1129, 2144, 2155
CspAI	ACCGGT	1 cut(s)	1335
CspCI	CAANNNNNGTGG	2 cut(s)	1675, 1710
CviAII	CATG	7 cut(s)	111, 769, 1011, 1165, 1442, 1928, 2120
CviQI	GTAC	3 cut(s)	1129, 2144, 2155
DdeI	CTNAG	5 cut(s)	285, 456, 481, 1377, 1778
DpnI	GATC	7 cut(s)	786, 824, 922, 983, 1023, 1467, 1548
DpnII	GATC	7 cut(s)	784, 822, 920, 981, 1021, 1465, 1546
EaeI	YGGCCR	3 cut(s)	376, 924, 1769
EagI	CGGCCG	1 cut(s)	376
EciI	GGCGGA	4 cut(s)	281, 301, 832, 933
Ecl136II	GAGCTC	1 cut(s)	289
EclXI	CGGCCG	1 cut(s)	376
Eco130I	CCWWGG	1 cut(s)	1441
Eco147I	AGGCCT	2 cut(s)	1661, 1735
Eco24I	GRGCYC	2 cut(s)	291, 492
Eco31I	GGTCTC	2 cut(s)	804, 1511
Eco47I	GGWCC	7 cut(s)	16, 509, 775, 840, 1258, 1333, 1338
Eco52I	CGGCCG	1 cut(s)	376
Eco53kI	GAGCTC	1 cut(s)	289
Eco57I	CTGAAG	1 cut(s)	483
Eco88I	CYCGRG	1 cut(s)	1087
EcoICRI	GAGCTC	1 cut(s)	289
EcoO109I	RGGNCCY	3 cut(s)	246, 489, 1258
EcoRI	GAATTC	1 cut(s)	1405
EcoRII	CCWGG	3 cut(s)	1267, 1313, 1661
EcoT14I	CCWWGG	1 cut(s)	1441
EcoT38I	GRGCYC	2 cut(s)	291, 492
ErhI	CCWWGG	1 cut(s)	1441
FaeI	CATG	7 cut(s)	114, 772, 1014, 1168, 1445, 1931, 2123
FaqI	GGGAC	2 cut(s)	154, 1136
FatI	CATG	7 cut(s)	110, 768, 1010, 1164, 1441, 1927, 2119
FauI	CCCGC	6 cut(s)	45, 236, 1036, 1057, 1265, 1781
FokI	GGATG	4 cut(s)	1063, 1084, 1196, 1721
FriOI	GRGCYC	2 cut(s)	291, 492
FspBI	CTAG	3 cut(s)	128, 1644, 1851
GlaI	GCGC	5 cut(s)	908, 1007, 1114, 1322, 2011
GsaI	CCCAGC	3 cut(s)	12, 489, 2103
GsuI	CTGGAG	4 cut(s)	235, 1265, 2015, 2101
HaeII	RGCGCY	1 cut(s)	1009
HgaI	GACGC	2 cut(s)	1070, 1587
HhaI	GCGC	5 cut(s)	909, 1008, 1115, 1323, 2012
Hin1I	GRCGYC	1 cut(s)	1598
Hin1II	CATG	7 cut(s)	114, 772, 1014, 1168, 1445, 1931, 2123
Hin6I	GCGC	5 cut(s)	907, 1006, 1113, 1321, 2010
HinP1I	GCGC	5 cut(s)	907, 1006, 1113, 1321, 2010
HindIII	AAGCTT	2 cut(s)	832, 893
HphI	GGTGA	2 cut(s)	85, 2013
Hpy166II	GTNNAC	1 cut(s)	2144
Hpy8I	GTNNAC	1 cut(s)	2144
HpyAV	CCTTC	6 cut(s)	320, 766, 1134, 1641, 1962, 1972
HpyCH4III	ACNGT	2 cut(s)	794, 960
HpyCH4IV	ACGT	1 cut(s)	369
HpyCH4V	TGCA	5 cut(s)	139, 146, 871, 1949, 2123
HpyF3I	CTNAG	5 cut(s)	285, 456, 481, 1377, 1778
HpySE526I	ACGT	1 cut(s)	369
Hsp92I	GRCGYC	1 cut(s)	1598
Hsp92II	CATG	7 cut(s)	114, 772, 1014, 1168, 1445, 1931, 2123
HspAI	GCGC	5 cut(s)	907, 1006, 1113, 1321, 2010
KpnI	GGTACC	1 cut(s)	1132
Kzo9I	GATC	7 cut(s)	784, 822, 920, 981, 1021, 1465, 1546
LguI	GCTCTTC	1 cut(s)	2099
Lsp1109I	GCAGC	3 cut(s)	55, 190, 433
LweI	GCATC	3 cut(s)	1030, 1174, 1201
MaeI	CTAG	3 cut(s)	128, 1644, 1851
MaeII	ACGT	1 cut(s)	369
MaeIII	GTNAC	1 cut(s)	1053
MalI	GATC	7 cut(s)	786, 824, 922, 983, 1023, 1467, 1548
MboI	GATC	7 cut(s)	784, 822, 920, 981, 1021, 1465, 1546
MflI	RGATCY	1 cut(s)	784
MhlI	GDGCHC	2 cut(s)	291, 492
MluCI	AATT	5 cut(s)	88, 743, 1134, 1218, 1405
MlyI	GAGTC	6 cut(s)	530, 1298, 1336, 1481, 1772, 2037
MmeI	TCCRAC	6 cut(s)	648, 957, 1028, 1049, 1365, 1835
MseI	TTAA	4 cut(s)	210, 402, 897, 1248
MslI	CAYNNNNRTG	1 cut(s)	1932
MspA1I	CMGCKG	2 cut(s)	203, 2079
MspCI	CTTAAG	2 cut(s)	209, 896
MspR9I	CCNGG	6 cut(s)	451, 1027, 1262, 1269, 1315, 1663
Mva1269I	GAATGC	2 cut(s)	1161, 1246
MvaI	CCWGG	3 cut(s)	1269, 1315, 1663
MvnI	CGCG	7 cut(s)	375, 1064, 1113, 1503, 1539, 1560, 1581
NciI	CCSGG	3 cut(s)	451, 1027, 1262
NcoI	CCATGG	1 cut(s)	1441
NdeII	GATC	7 cut(s)	784, 822, 920, 981, 1021, 1465, 1546
NlaIII	CATG	7 cut(s)	114, 772, 1014, 1168, 1445, 1931, 2123
NlaIV	GGNNCC	8 cut(s)	18, 247, 490, 1130, 1233, 1260, 1266, 1461
NmuCI	GTSAC	1 cut(s)	1053
NspI	RCATGY	1 cut(s)	1931
NspV	TTCGAA	1 cut(s)	1403
PceI	AGGCCT	2 cut(s)	1661, 1735
PciI	ACATGT	1 cut(s)	1927
PciSI	GCTCTTC	1 cut(s)	2099
PctI	GAATGC	2 cut(s)	1161, 1246
PfeI	GAWTC	9 cut(s)	4, 330, 1206, 1481, 1568, 1589, 2002, 2026, 2116
PinAI	ACCGGT	1 cut(s)	1335
PleI	GAGTC	6 cut(s)	529, 1298, 1335, 1480, 1771, 2037
PpsI	GAGTC	6 cut(s)	529, 1298, 1335, 1480, 1771, 2037
PpuMI	RGGWCCY	1 cut(s)	1258
PscI	ACATGT	1 cut(s)	1927
PshAI	GACNNNNGTC	2 cut(s)	464, 1065
Psp124BI	GAGCTC	1 cut(s)	291
Psp5II	RGGWCCY	1 cut(s)	1258
Psp6I	CCWGG	3 cut(s)	1267, 1313, 1661
PspFI	CCCAGC	3 cut(s)	8, 485, 2099
PspGI	CCWGG	3 cut(s)	1267, 1313, 1661
PspN4I	GGNNCC	8 cut(s)	18, 247, 490, 1130, 1233, 1260, 1266, 1461
PspOMI	GGGCCC	1 cut(s)	488
PspPPI	RGGWCCY	1 cut(s)	1258
PstI	CTGCAG	1 cut(s)	873
PsuI	RGATCY	1 cut(s)	784
PvuII	CAGCTG	1 cut(s)	2079
RsaI	GTAC	3 cut(s)	1130, 2145, 2156
RsaNI	GTAC	3 cut(s)	1129, 2144, 2155
RseI	CAYNNNNRTG	1 cut(s)	1932
SacI	GAGCTC	1 cut(s)	291
SapI	GCTCTTC	1 cut(s)	2099
SaqAI	TTAA	4 cut(s)	210, 402, 897, 1248
Sau3AI	GATC	7 cut(s)	784, 822, 920, 981, 1021, 1465, 1546
SchI	GAGTC	6 cut(s)	530, 1298, 1336, 1481, 1772, 2037
ScrFI	CCNGG	6 cut(s)	451, 1027, 1262, 1269, 1315, 1663
SduI	GDGCHC	2 cut(s)	291, 492
SfaNI	GCATC	3 cut(s)	1030, 1174, 1201
SfcI	CTRYAG	1 cut(s)	869
SfuI	TTCGAA	1 cut(s)	1403
SinI	GGWCC	7 cut(s)	16, 509, 775, 840, 1258, 1333, 1338
SmiMI	CAYNNNNRTG	1 cut(s)	1932
SmlI	CTYRAG	2 cut(s)	209, 896
SmoI	CTYRAG	2 cut(s)	209, 896
Sse9I	AATT	5 cut(s)	88, 743, 1134, 1218, 1405
SseBI	AGGCCT	2 cut(s)	1661, 1735
SspMI	CTAG	3 cut(s)	128, 1644, 1851
SstI	GAGCTC	1 cut(s)	291
StuI	AGGCCT	2 cut(s)	1661, 1735
StyD4I	CCNGG	6 cut(s)	449, 1025, 1260, 1267, 1313, 1661
StyI	CCWWGG	1 cut(s)	1441
TaaI	ACNGT	2 cut(s)	794, 960
TaiI	ACGT	1 cut(s)	372
TaqII	GACCGA	1 cut(s)	989
TasI	AATT	5 cut(s)	88, 743, 1134, 1218, 1405
TatI	WGTACW	2 cut(s)	2143, 2154
TfiI	GAWTC	9 cut(s)	4, 330, 1206, 1481, 1568, 1589, 2002, 2026, 2116
Tru1I	TTAA	4 cut(s)	210, 402, 897, 1248
Tru9I	TTAA	4 cut(s)	210, 402, 897, 1248
TscAI	CASTG	2 cut(s)	655, 1852
TseFI	GTSAC	1 cut(s)	1053
TseI	GCWGC	3 cut(s)	43, 203, 446
Tsp45I	GTSAC	1 cut(s)	1053
TspDTI	ATGAA	5 cut(s)	17, 785, 1253, 1406, 1669
TspGWI	ACGGA	2 cut(s)	29, 618
TspRI	CASTG	2 cut(s)	655, 1852
Vha464I	CTTAAG	2 cut(s)	209, 896
VpaK11BI	GGWCC	7 cut(s)	16, 509, 775, 840, 1258, 1333, 1338
XapI	RAATTY	3 cut(s)	88, 1218, 1405
XbaI	TCTAGA	1 cut(s)	1643
XceI	RCATGY	1 cut(s)	1931
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1171
XspI	CTAG	3 cut(s)	128, 1644, 1851

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.