pycom04g18730

transport protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
20654838 .. 20656478
1641 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g18730.2

Sequence Viewer

Length: 885 bp
ATGGATTTCGTGGAACTGGAGGCGATCGAGGGCCTCCGATGGTCCTGGAATTCATGGCCGCCGTCAAAATCCGAGAGCGCCGCCCTCGTCATCCCTCTCAGCATCATGTGCACTCCGCTGATGCAGCAGGCCGAGCTCCCGATACTCCCCTACGACCCCGTCACATGCCTCCGATGTGGCGCCGTTTTGAACCCCTACGCCCGCGTCGAATACCCTTCTCGCATCTGGTTCTGCTCCTTCTGCCACCACAAGAACTCCTTCCCTCACTCTTACTCCAACATCGGCGACACCAACCTCCCAGCCGAGCTTTTCCCGACTTACAGCGCCGTTGAGTACGCCAAAACCGCCCACGGAATTCCCAGTTCCGGCTCGAATTCCCTGAATTGGGCAAATGGTTTGTCGTCATCGTCGTCCTTGTCGTCTATGGATTCGTCGTCGGCGGCCTCGGTGTCGGATGGGGATTCGAGAGGGGTGAGGCCGGCGTTCGTGTTCGTTGTAGACGCTTGCACGCCTGTGGACGAGCTTGGGGTTCTGAAAAATGAGCTCTTGCTTGTTGTGGAAAAGCTTCCGGAGACTGCTTTGGTGGGTCTGGTCACGTTTGATTCGATGGTTCGGGTTCATGATCTCGGGTTTTCCGAGTGCTCGAGGGCCGTGGTGTTTCACGGCGAAAGGGAGCTGTCATTGCTTCAGATCCAACGATTTCTGGGCATTAAGCGAACAAAGCATCAGCAACTCGGAAAGATGTCAGTTAATCAAAAGCAGGGCTTTTTGCTACCTGTTTCTGAATGTGAGTTCAACATCACAACTGCAATTGATGATCGATCCATTGTTCACTTCAAGTCAAGTCCGGTCATCGCCCGCGAAGGTGTACAGGAGCAGCAATAG

Protein Analysis

295

Amino Acids

32.38

Weight (kDa)

5.49

Isoelectric Point (pI)

58.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 179
AccI GTMKAC 1 cut(s) 498
AccII CGCG 2 cut(s) 204, 861
AccIII TCCGGA 1 cut(s) 568
AciI CCGC 7 cut(s) 59, 81, 116, 202, 345, 440, 859
AclWI GGATC 2 cut(s) 685, 816
AcoI YGGCCR 1 cut(s) 56
AcsI RAATTY 3 cut(s) 49, 354, 373
AcuI CTGAAG 1 cut(s) 671
AcyI GRCGYC 1 cut(s) 180
AfaI GTAC 2 cut(s) 335, 870
AfiI CCNNNNNNNGG 3 cut(s) 365, 384, 385
AgsI TTSAA 3 cut(s) 190, 796, 838
AjnI CCWGG 1 cut(s) 44
AleI CACNNNNGTG 1 cut(s) 512
AluBI AGCT 6 cut(s) 136, 307, 523, 544, 565, 676
AluI AGCT 6 cut(s) 136, 307, 523, 544, 565, 676
Alw21I GWGCWC 4 cut(s) 113, 138, 546, 644
Alw26I GTCTC 1 cut(s) 566
Alw44I GTGCAC 1 cut(s) 109
AlwI GGATC 2 cut(s) 685, 816
Ama87I CYCGRG 2 cut(s) 626, 643
Aor13HI TCCGGA 1 cut(s) 568
AoxI GGCC 6 cut(s) 31, 56, 129, 441, 476, 648
ApaLI GTGCAC 1 cut(s) 109
ApeKI GCWGC 2 cut(s) 124, 877
ApoI RAATTY 3 cut(s) 49, 354, 373
ArsI GACNNNNNNTTYG 2 cut(s) 383, 415
Asp700I GAANNNNTTC 2 cut(s) 257, 564
AspLEI GCGC 3 cut(s) 80, 182, 326
AspS9I GGNCC 3 cut(s) 31, 42, 648
AsuHPI GGTGA 1 cut(s) 484
AvaI CYCGRG 2 cut(s) 626, 643
AvaII GGWCC 1 cut(s) 42
BaeGI GKGCMC 1 cut(s) 113
BanI GGYRCC 1 cut(s) 179
BanII GRGCYC 2 cut(s) 138, 546
Bbv12I GWGCWC 4 cut(s) 113, 138, 546, 644
BbvI GCAGC 1 cut(s) 136
BccI CCATC 3 cut(s) 33, 449, 601
BceAI ACGGC 5 cut(s) 46, 167, 311, 635, 679
BciT130I CCWGG 1 cut(s) 46
BcoDI GTCTC 1 cut(s) 566
BfoI RGCGCY 3 cut(s) 81, 183, 327
BisI GCNGC 5 cut(s) 59, 81, 125, 441, 878
BlsI GCNGC 5 cut(s) 60, 82, 126, 442, 879
Bme1390I CCNGG 1 cut(s) 46
Bme18I GGWCC 1 cut(s) 42
BmeT110I CYCGRG 2 cut(s) 626, 643
BmgT120I GGNCC 3 cut(s) 31, 42, 648
BmiI GGNNCC 1 cut(s) 181
BmrFI CCNGG 1 cut(s) 46
BmrI ACTGGG 1 cut(s) 354
BmsI GCATC 4 cut(s) 111, 111, 231, 733
BmuI ACTGGG 1 cut(s) 354
BpmI CTGGAG 1 cut(s) 38
Bsa29I ATCGAT 1 cut(s) 820
BsaHI GRCGYC 1 cut(s) 180
BsaJI CCNNGG 3 cut(s) 349, 444, 651
BsaWI WCCGGW 2 cut(s) 568, 847
BsaXI ACNNNNNCTCC 4 cut(s) 239, 257, 269, 287
Bsc4I CCNNNNNNNGG 3 cut(s) 365, 384, 385
Bse118I RCCGGY 1 cut(s) 478
Bse1I ACTGG 2 cut(s) 21, 360
Bse3DI GCAATG 1 cut(s) 680
BseAI TCCGGA 1 cut(s) 568
BseBI CCWGG 1 cut(s) 46
BseCI ATCGAT 1 cut(s) 820
BseDI CCNNGG 3 cut(s) 349, 444, 651
BseGI GGATG 2 cut(s) 90, 460
BseLI CCNNNNNNNGG 3 cut(s) 365, 384, 385
BseMI GCAATG 1 cut(s) 680
BseMII CTCAG 1 cut(s) 112
BseNI ACTGG 2 cut(s) 21, 360
BseSI GKGCMC 1 cut(s) 113
BseXI GCAGC 1 cut(s) 136
BseYI CCCAGC 1 cut(s) 298
Bsh1236I CGCG 2 cut(s) 204, 861
Bsh1285I CGRYCG 1 cut(s) 27
BshFI GGCC 6 cut(s) 33, 58, 131, 443, 478, 650
BshNI GGYRCC 1 cut(s) 179
BshVI ATCGAT 1 cut(s) 820
BsiEI CGRYCG 1 cut(s) 27
BsiHKAI GWGCWC 4 cut(s) 113, 138, 546, 644
BsiHKCI CYCGRG 2 cut(s) 626, 643
BsiSI CCGG 4 cut(s) 366, 479, 569, 848
BslI CCNNNNNNNGG 3 cut(s) 365, 384, 385
BsmAI GTCTC 1 cut(s) 566
BsnI GGCC 6 cut(s) 33, 58, 131, 443, 478, 650
BsoBI CYCGRG 2 cut(s) 626, 643
Bsp1286I GDGCHC 4 cut(s) 113, 138, 546, 644
Bsp13I TCCGGA 1 cut(s) 568
Bsp1407I TGTACA 1 cut(s) 868
Bsp143I GATC 5 cut(s) 24, 622, 690, 817, 821
BspACI CCGC 7 cut(s) 59, 81, 116, 202, 345, 440, 859
BspANI GGCC 6 cut(s) 33, 58, 131, 443, 478, 650
BspCNI CTCAG 1 cut(s) 111
BspDI ATCGAT 1 cut(s) 820
BspEI TCCGGA 1 cut(s) 568
BspFNI CGCG 2 cut(s) 204, 861
BspHI TCATGA 1 cut(s) 619
BspLI GGNNCC 1 cut(s) 181
BspPI GGATC 2 cut(s) 685, 816
BspT107I GGYRCC 1 cut(s) 179
BsrDI GCAATG 1 cut(s) 680
BsrFI RCCGGY 1 cut(s) 478
BsrGI TGTACA 1 cut(s) 868
BsrI ACTGG 2 cut(s) 21, 360
BssAI RCCGGY 1 cut(s) 478
BssECI CCNNGG 3 cut(s) 349, 444, 651
BssMI GATC 5 cut(s) 24, 622, 690, 817, 821
BssNI GRCGYC 1 cut(s) 180
Bst2UI CCWGG 1 cut(s) 46
BstACI GRCGYC 1 cut(s) 180
BstAPI GCANNNNNTGC 1 cut(s) 108
BstAUI TGTACA 1 cut(s) 868
BstC8I GCNNGC 6 cut(s) 129, 202, 480, 505, 509, 859
BstDEI CTNAG 1 cut(s) 98
BstDSI CCRYGG 2 cut(s) 349, 651
BstF5I GGATG 2 cut(s) 90, 460
BstFNI CGCG 2 cut(s) 204, 861
BstH2I RGCGCY 3 cut(s) 81, 183, 327
BstHHI GCGC 3 cut(s) 80, 182, 326
BstKTI GATC 5 cut(s) 27, 625, 693, 820, 824
BstMAI GTCTC 1 cut(s) 566
BstMBI GATC 5 cut(s) 24, 622, 690, 817, 821
BstMCI CGRYCG 1 cut(s) 27
BstMWI GCNNNNNNNGC 7 cut(s) 108, 124, 133, 240, 344, 682, 721
BstNI CCWGG 1 cut(s) 46
BstNSI RCATGY 1 cut(s) 168
BstSCI CCNGG 1 cut(s) 44
BstSLI GKGCMC 1 cut(s) 113
BstUI CGCG 2 cut(s) 204, 861
BstV1I GCAGC 1 cut(s) 136
BstX2I RGATCY 1 cut(s) 690
BstYI RGATCY 1 cut(s) 690
Bsu15I ATCGAT 1 cut(s) 820
BsuRI GGCC 6 cut(s) 33, 58, 131, 443, 478, 650
BsuTUI ATCGAT 1 cut(s) 820
BtgI CCRYGG 2 cut(s) 349, 651
BtgZI GCGATG 1 cut(s) 838
BtsCI GGATG 2 cut(s) 90, 460
Cac8I GCNNGC 6 cut(s) 129, 202, 480, 505, 509, 859
CciI TCATGA 1 cut(s) 619
CfoI GCGC 3 cut(s) 80, 182, 326
Cfr10I RCCGGY 1 cut(s) 478
Cfr13I GGNCC 3 cut(s) 31, 42, 648
ClaI ATCGAT 1 cut(s) 820
CseI GACGC 2 cut(s) 193, 509
Csp6I GTAC 2 cut(s) 334, 869
CviAII CATG 4 cut(s) 54, 106, 165, 620
CviQI GTAC 2 cut(s) 334, 869
DdeI CTNAG 1 cut(s) 98
DinI GGCGCC 1 cut(s) 181
DpnI GATC 5 cut(s) 26, 624, 692, 819, 823
DpnII GATC 5 cut(s) 24, 622, 690, 817, 821
EaeI YGGCCR 1 cut(s) 56
Ecl136II GAGCTC 2 cut(s) 136, 544
Eco24I GRGCYC 2 cut(s) 138, 546
Eco47I GGWCC 1 cut(s) 42
Eco53kI GAGCTC 2 cut(s) 136, 544
Eco57I CTGAAG 1 cut(s) 671
Eco88I CYCGRG 2 cut(s) 626, 643
EcoICRI GAGCTC 2 cut(s) 136, 544
EcoO109I RGGNCCY 1 cut(s) 31
EcoRI GAATTC 3 cut(s) 49, 354, 373
EcoRII CCWGG 1 cut(s) 44
EcoT38I GRGCYC 2 cut(s) 138, 546
EgeI GGCGCC 1 cut(s) 181
EheI GGCGCC 1 cut(s) 181
FaeI CATG 4 cut(s) 57, 109, 168, 623
FaiI YATR 5 cut(s) 55, 107, 166, 425, 621
FalI AAGNNNNNCTT 4 cut(s) 242, 274, 749, 781
FatI CATG 4 cut(s) 53, 105, 164, 619
FauI CCCGC 2 cut(s) 209, 866
FblI GTMKAC 1 cut(s) 498
Fnu4HI GCNGC 5 cut(s) 59, 81, 125, 441, 878
FokI GGATG 2 cut(s) 77, 467
FriOI GRGCYC 2 cut(s) 138, 546
Fsp4HI GCNGC 5 cut(s) 59, 81, 125, 441, 878
GlaI GCGC 3 cut(s) 79, 181, 325
GluI GCNGC 5 cut(s) 59, 81, 125, 441, 878
GsaI CCCAGC 1 cut(s) 302
GsuI CTGGAG 1 cut(s) 38
HaeII RGCGCY 3 cut(s) 81, 183, 327
HaeIII GGCC 6 cut(s) 33, 58, 131, 443, 478, 650
HapII CCGG 4 cut(s) 366, 479, 569, 848
HgaI GACGC 2 cut(s) 193, 509
HhaI GCGC 3 cut(s) 80, 182, 326
Hin1I GRCGYC 1 cut(s) 180
Hin1II CATG 4 cut(s) 57, 109, 168, 623
Hin6I GCGC 3 cut(s) 78, 180, 324
HinP1I GCGC 3 cut(s) 78, 180, 324
HindIII AAGCTT 1 cut(s) 563
HinfI GANTC 3 cut(s) 428, 461, 602
HpaII CCGG 4 cut(s) 366, 479, 569, 848
HphI GGTGA 1 cut(s) 484
Hpy166II GTNNAC 5 cut(s) 111, 499, 517, 832, 869
Hpy188I TCNGA 9 cut(s) 38, 73, 173, 454, 534, 637, 690, 737, 784
Hpy188III TCNNGA 5 cut(s) 139, 313, 465, 569, 620
Hpy8I GTNNAC 5 cut(s) 111, 499, 517, 832, 869
Hpy99I CGWCG 4 cut(s) 209, 412, 436, 439
HpyAV CCTTC 4 cut(s) 225, 247, 268, 857
HpyCH4IV ACGT 1 cut(s) 596
HpyCH4V TGCA 4 cut(s) 111, 124, 507, 809
HpyF10VI GCNNNNNNNGC 7 cut(s) 108, 124, 133, 240, 344, 682, 721
HpyF3I CTNAG 1 cut(s) 98
HpySE526I ACGT 1 cut(s) 596
Hsp92I GRCGYC 1 cut(s) 180
Hsp92II CATG 4 cut(s) 57, 109, 168, 623
HspAI GCGC 3 cut(s) 78, 180, 324
KasI GGCGCC 1 cut(s) 179
Kpn2I TCCGGA 1 cut(s) 568
KroI GCCGGC 1 cut(s) 478
KroNI GCCGGC 1 cut(s) 480
Kzo9I GATC 5 cut(s) 24, 622, 690, 817, 821
LmnI GCTCC 4 cut(s) 141, 239, 673, 874
Lsp1109I GCAGC 1 cut(s) 136
LweI GCATC 4 cut(s) 111, 111, 231, 733
MaeII ACGT 1 cut(s) 596
MaeIII GTNAC 2 cut(s) 160, 592
MalI GATC 5 cut(s) 26, 624, 692, 819, 823
MboI GATC 5 cut(s) 24, 622, 690, 817, 821
MfeI CAATTG 1 cut(s) 810
MflI RGATCY 1 cut(s) 690
MhlI GDGCHC 4 cut(s) 113, 138, 546, 644
MluCI AATT 5 cut(s) 49, 354, 373, 382, 810
Mly113I GGCGCC 1 cut(s) 180
MmeI TCCRAC 3 cut(s) 300, 432, 718
MroI TCCGGA 1 cut(s) 568
MroNI GCCGGC 1 cut(s) 478
MroXI GAANNNNTTC 2 cut(s) 257, 564
MseI TTAA 2 cut(s) 711, 750
MslI CAYNNNNRTG 1 cut(s) 512
MspA1I CMGCKG 1 cut(s) 118
MspI CCGG 4 cut(s) 366, 479, 569, 848
MspR9I CCNGG 1 cut(s) 46
MunI CAATTG 1 cut(s) 810
MvaI CCWGG 1 cut(s) 46
MvnI CGCG 2 cut(s) 204, 861
MwoI GCNNNNNNNGC 7 cut(s) 108, 124, 133, 240, 344, 682, 721
NaeI GCCGGC 1 cut(s) 480
NarI GGCGCC 1 cut(s) 180
NdeII GATC 5 cut(s) 24, 622, 690, 817, 821
NgoMIV GCCGGC 1 cut(s) 478
NlaIII CATG 4 cut(s) 57, 109, 168, 623
NlaIV GGNNCC 1 cut(s) 181
NmeAIII GCCGAG 2 cut(s) 157, 328
NmuCI GTSAC 2 cut(s) 160, 592
NspI RCATGY 1 cut(s) 168
OliI CACNNNNGTG 1 cut(s) 512
PaeR7I CTCGAG 1 cut(s) 643
PagI TCATGA 1 cut(s) 619
PcsI WCGNNNNNNNCGW 5 cut(s) 204, 407, 416, 602, 633
PdiI GCCGGC 1 cut(s) 480
PdmI GAANNNNTTC 2 cut(s) 257, 564
PfeI GAWTC 3 cut(s) 428, 461, 602
PflFI GACNNNGTC 1 cut(s) 158
PfoI TCCNGGA 1 cut(s) 44
PkrI GCNGC 5 cut(s) 60, 82, 126, 442, 879
Ple19I CGATCG 1 cut(s) 27
PluTI GGCGCC 1 cut(s) 183
Psp124BI GAGCTC 2 cut(s) 138, 546
Psp6I CCWGG 1 cut(s) 44
PspFI CCCAGC 1 cut(s) 298
PspGI CCWGG 1 cut(s) 44
PspN4I GGNNCC 1 cut(s) 181
PspPI GGNCC 3 cut(s) 31, 42, 648
PspXI VCTCGAGB 1 cut(s) 643
PsuI RGATCY 1 cut(s) 690
PsyI GACNNNGTC 1 cut(s) 158
PvuI CGATCG 1 cut(s) 27
RsaI GTAC 2 cut(s) 335, 870
RsaNI GTAC 2 cut(s) 334, 869
RseI CAYNNNNRTG 1 cut(s) 512
SacI GAGCTC 2 cut(s) 138, 546
SaqAI TTAA 2 cut(s) 711, 750
SatI GCNGC 5 cut(s) 59, 81, 125, 441, 878
Sau3AI GATC 5 cut(s) 24, 622, 690, 817, 821
Sau96I GGNCC 3 cut(s) 31, 42, 648
ScrFI CCNGG 1 cut(s) 46
SduI GDGCHC 4 cut(s) 113, 138, 546, 644
SfaNI GCATC 4 cut(s) 111, 111, 231, 733
SfoI GGCGCC 1 cut(s) 181
Sfr274I CTCGAG 1 cut(s) 643
SinI GGWCC 1 cut(s) 42
SlaI CTCGAG 1 cut(s) 643
SmiMI CAYNNNNRTG 1 cut(s) 512
SmlI CTYRAG 1 cut(s) 643
SmoI CTYRAG 1 cut(s) 643
Sse9I AATT 5 cut(s) 49, 354, 373, 382, 810
SsiI CCGC 7 cut(s) 59, 81, 116, 202, 345, 440, 859
SspDI GGCGCC 1 cut(s) 179
SstI GAGCTC 2 cut(s) 138, 546
StyD4I CCNGG 1 cut(s) 44
TaiI ACGT 1 cut(s) 599
TaqI TCGA 7 cut(s) 27, 207, 371, 464, 605, 644, 820
TasI AATT 5 cut(s) 49, 354, 373, 382, 810
TatI WGTACW 1 cut(s) 868
TauI GCSGC 3 cut(s) 61, 83, 443
TfiI GAWTC 3 cut(s) 428, 461, 602
Tru1I TTAA 2 cut(s) 711, 750
Tru9I TTAA 2 cut(s) 711, 750
TseFI GTSAC 2 cut(s) 160, 592
TseI GCWGC 2 cut(s) 124, 877
Tsp45I GTSAC 2 cut(s) 160, 592
TspDTI ATGAA 2 cut(s) 42, 608
TspGWI ACGGA 1 cut(s) 366
Tth111I GACNNNGTC 1 cut(s) 158
VneI GTGCAC 1 cut(s) 109
VpaK11BI GGWCC 1 cut(s) 42
XapI RAATTY 3 cut(s) 49, 354, 373
XceI RCATGY 1 cut(s) 168
XhoI CTCGAG 1 cut(s) 643
XmiI GTMKAC 1 cut(s) 498
XmnI GAANNNNTTC 2 cut(s) 257, 564
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.