Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr4

Orthogroup ID

OG0005571

Physical Location & Seq

Genomic Coordinates Forward (+)

21658218 .. 21663900

Gene Structure 5683 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom04g20140.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2418 bp

ATGAAAAGCATAACCATGTTTCCAAAGTCGACCCATGAAACATTTGCAAATAAGATTTACCAGACATTCAAAACTCATAAGCGCTTTATAAAGCCAAAATTGTCTCGCACGGATTTTACCATCGCTCATTATGCTGGAGAGGTCCTGTATCAGTCTGACCAGTTTTTGGATAAAAACAAAGACTACGTGGTTCCTGAACATCAAGACTTGTTGGGAGCTTCCAAATGTTCCTTTGTGGCAGGCCTTTTCCCTCCACTTCCAGAGGAGACAGCCAAATCTTCCAAGTTTTCTTCGATTGGCTCTCGTTTTAAGCTTCAACTGCAATCATTAATGGAGACCCTAAACTCTACAGAACCTCACTATATTAGATGTGTAAAGCCAAACAATCTTCTAAAACCAGCCGTATTTGAGAACGTGAACATTATGCAGCAACTGCGCTGTGGTGGTGTTTTAGAGGCAATCCGAATTAGTTGTGCTGGCTACCCTACTAGAAAACCATTTTTCGAATTCATAAACAGATTCGGACTTCTTGCACCAGAGGCCTTGGAAGGAAACTATGATGAAAAGGTTGCGTGCATGAAGATACTCGAAAAGAAGGGTCTTAAAGGGTTTCAGATAGGTAAAACAAAGGTATTCCTAAGAGCTGGTCAGATGGCCGAGTTAGATGCACGAAGAGCTGAAGTACTCAGTACTGCAGCTAAAACTATACAGCGACGTGTACGAACCCATTATGCTAGGAAACGGTTTATTGCACTGCGACAGGCAACCGTAGTTCTGCAATCGATATGCAGAGGAAGCCTGGCTTGCAAAGTCTTCCACGGCATGCAAAAAGAGGCAGCTGCAGTGAAAATTCAGAAGCACCTACGTAAACACCAAGCCAGAACAACTTACAACAAACTCCATGTCTCAGTTCTAGTTGTGCAAACAGGTTTAAGAGCAATGGCTGCTCGTAAAGAATTCAGATTTAAAAGGCAAAGCAAAGCAGCAATTATTCTTCAGGCGGTGTGGCGTTGTCATAGAGCTGCCAAATACTTTAAGAGGCTCAAGAGGGGTTCAATAGCTGCACAGACCCAAATGAGGGGGAAAATTGCAAGGCGGGAACTTAGGAAGCTCAAAATGGCTGCAAGGGAAACAGGAGCACTTAAAGAAGCAAAAGATGCACTGGAAAAACGAGTGGAGGAACTAAATTGGCGACTACAGTTGGAAAAACGTTTAAGGACTGACCTAGAAGAAGCTAAAGCACAAGAGATAACGAAATTGCAGAATTCATTGCAAGAAACGCAGACCAAACTTGATGAATCAAATGCATTGATTGTGAAGGAACGAGAGGCTGCAAAGAAAGCTCTTGAAGAGGCACCTCCTGTGGTTCAGGAAACCCAAGTTATGGTTGAGGACACTGCAAAAGTTGAATCTCTAACCGCAGAAGTTGACAGTTTAAAGGCCTCTTTGGAGTCAGAGAAACAAAGAGCAGAAGAAAATGAAAGAAAATGTAATGAAGCTCAAACATCGAGTGAAGAACGAGGCAAGAAATTAGAAGAAACAGAGAAAAAAGTTAGTCAGCTCCAGGAAAATTTGACCAGGCTAGAAGAGAAGCTTACCAATTTAGAATCAGAAAACCAAGTATTACGCCAACAAGCTGTGTCCATGACACCTAATAAATTCCTTTCTGGACGGTCCAGATCAATTATTCAGAGGGCAGCTGAAAGTGGCCATATTCCAGGGGATGCAAAGACACCTCTGGATCTGCATAGTCCTTCAGTAAACCACAGGGAGTCGGAATTGGAGGATAAGCCACAGAAATCATTGAATGAAAAACAGCAAGAGAACCAGGAGTTGCTCATTCGATGTATCGCACAACATCTTGGCTTTGCTGGGAACAGGCCTATTGCTGCCTGCATCATATACAAATGCCTTCTGCAGTGGAGATCATTTGAAGTTGAGCGGACTAGCATTTTCGATAGGATTATTCAGACCATAGGGAATGCCATTGAGACCCAGGATAACAACGATATCTTGGCCTATTGGTTATCCAATGCCTCAACACTTCTATTACTCCTCCAGCGCACACTAAAAGCAAGTGGTGCTGCTGGAATGGCACCCCAACGACGTCGATCATCATCAGCTACTTTGTTTGGAAGGATGACACAAAGTTTCCGTGGAGCCCCTCAAGGTGTCAATATCTCCTTAATAAATGGTGGAATGAGTGGCGGAGTGGATACTTTACGGCAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTCAAACAGCAACTTACAGCATATGTAGAAAAGATTTATGGGATGATTCGAGATAATTTGAAGAAAGAGATTTCTCCATTGCTTGGATTGTGCATTCAGGCACCAAGAACATCCCGGGCAAGCTTGGTCAAAGGATCGATCTCGATCAGTTGGCAACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000146 GO:0000166 GO:0000331 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0006928 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008144 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015629 GO:0016043 GO:0016049 GO:0016459 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022414 GO:0030029 GO:0030036 GO:0030048 GO:0030154 GO:0030554 GO:0030898 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0033275 GO:0035639 GO:0036094 GO:0040007 GO:0042623 GO:0042641 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043531 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0044877 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051015 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051656 GO:0051704 GO:0060560 GO:0070252 GO:0071840 GO:0097159 GO:0097367 GO:0097435 GO:0097708 GO:0140027 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DIL IQ Myosin_N Myosin_head

Protein Analysis

806

Amino Acids

91.16

Weight (kDa)

9.81

Isoelectric Point (pI)

50.97

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08730 AT1G08730 AT1G54560 AT1G54560
fragaria_vesca	FvH4_6g02450 FvH4_6g02450
malus_domestica	MD04G1227800.v1.1 MD12G1244600.v1.1
prunus_persica	Prupe.6G347100_v2.0.a1 Prupe.6G347100_v2.0.a1 Prupe.6G347100_v2.0.a1 Prupe.6G347100_v2.0.a1
pyrus_communis	pycom04g20130 pycom04g20140 pycom04g20150 pycom12g22440
rosa_chinensis	RchiOBHm_Chr3g0450241 RchiOBHm_Chr3g0450271
rosa_laevigata	RLG00000025743 RLG00000025747
rosa_multiflora	Rmu_sc0010184.1_g000002
rosa_roxburghii	Rroxscaffold_6G00427950
rosa_rugosa	Rorug02G0626300 Rorug02G0626400
rosa_samantha	Rh3AG025600 Rh3BG026300 Rh3CG025300
rosa_wichuraiana	Rw3G002080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	89
AatII	GACGTC	1 cut(s)	2110
AccB1I	GGYRCC	3 cut(s)	1354, 2095, 2356
AccB7I	CCANNNNNTGG	3 cut(s)	166, 1384, 2339
AccBSI	CCGCTC	1 cut(s)	1942
AccI	GTMKAC	1 cut(s)	29
AciI	CCGC	5 cut(s)	1001, 1096, 1419, 1942, 2208
AclI	AACGTT	1 cut(s)	1210
AclWI	GGATC	2 cut(s)	1749, 2398
AcoI	YGGCCR	2 cut(s)	654, 1708
AcsI	RAATTY	6 cut(s)	506, 849, 956, 1264, 1570, 1658
AcuI	CTGAAG	3 cut(s)	699, 980, 1740
AcyI	GRCGYC	1 cut(s)	2107
AfaI	GTAC	4 cut(s)	684, 691, 720, 2243
AfeI	AGCGCT	1 cut(s)	83
AfiI	CCNNNNNNNGG	5 cut(s)	166, 1077, 1078, 1384, 2339
AflIII	ACRYGT	1 cut(s)	715
AjiI	CACGTC	1 cut(s)	716
AjnI	CCWGG	6 cut(s)	798, 1563, 1577, 1717, 1827, 1995
Alw21I	GWGCWC	1 cut(s)	1141
Alw26I	GTCTC	5 cut(s)	108, 260, 329, 910, 1985
AlwI	GGATC	2 cut(s)	1749, 2398
AlwNI	CAGNNNCTG	1 cut(s)	433
Ama87I	CYCGRG	1 cut(s)	2370
Aor51HI	AGCGCT	1 cut(s)	83
AoxI	GGCC	7 cut(s)	241, 540, 654, 1440, 1708, 1880, 2016
ApoI	RAATTY	6 cut(s)	506, 849, 956, 1264, 1570, 1658
ArsI	GACNNNNNNTTYG	2 cut(s)	888, 920
AseI	ATTAAT	1 cut(s)	329
AspLEI	GCGC	3 cut(s)	84, 438, 2064
AspS9I	GGNCC	2 cut(s)	142, 1674
AsuC2I	CCSGG	2 cut(s)	2371, 2372
AsuII	TTCGAA	1 cut(s)	504
AvaI	CYCGRG	1 cut(s)	2370
AvaII	GGWCC	2 cut(s)	142, 1674
BalI	TGGCCA	1 cut(s)	1710
BanI	GGYRCC	3 cut(s)	1354, 2095, 2356
BanII	GRGCYC	1 cut(s)	2164
BbsI	GAAGAC	1 cut(s)	805
Bbv12I	GWGCWC	1 cut(s)	1141
BccI	CCATC	2 cut(s)	128, 646
BceAI	ACGGC	3 cut(s)	386, 835, 2240
BcgI	CGANNNNNNTGC	2 cut(s)	647, 681
BciT130I	CCWGG	6 cut(s)	800, 1565, 1579, 1719, 1829, 1997
BciVI	GTATCC	1 cut(s)	2209
BcnI	CCSGG	2 cut(s)	2371, 2372
BcoDI	GTCTC	5 cut(s)	108, 260, 329, 910, 1985
BfaI	CTAG	6 cut(s)	489, 735, 914, 1226, 1583, 1947
BfmI	CTRYAG	5 cut(s)	348, 693, 840, 1196, 1916
BfoI	RGCGCY	1 cut(s)	85
BfuI	GTATCC	1 cut(s)	2209
BmcAI	AGTACT	2 cut(s)	684, 691
Bme1390I	CCNGG	8 cut(s)	800, 1565, 1579, 1719, 1829, 1997, 2371, 2372
Bme18I	GGWCC	2 cut(s)	142, 1674
BmeT110I	CYCGRG	1 cut(s)	2370
BmgBI	CACGTC	1 cut(s)	716
BmgT120I	GGNCC	2 cut(s)	142, 1674
BmiI	GGNNCC	5 cut(s)	192, 1356, 2097, 2161, 2358
BmrFI	CCNGG	8 cut(s)	800, 1565, 1579, 1719, 1829, 1997, 2371, 2372
BmsI	GCATC	4 cut(s)	655, 1147, 1714, 1905
BpiI	GAAGAC	1 cut(s)	805
BpmI	CTGGAG	3 cut(s)	156, 1547, 2042
Bpu14I	TTCGAA	1 cut(s)	504
BpuEI	CTTGAG	2 cut(s)	1028, 2151
BpuMI	CCSGG	2 cut(s)	2371, 2372
Bsa29I	ATCGAT	2 cut(s)	782, 2393
BsaAI	YACGTR	2 cut(s)	187, 866
BsaBI	GATNNNNATC	2 cut(s)	2116, 2399
BsaHI	GRCGYC	1 cut(s)	2107
BsaI	GGTCTC	2 cut(s)	329, 1985
BsaJI	CCNNGG	6 cut(s)	543, 817, 1718, 1995, 2155, 2370
Bsc4I	CCNNNNNNNGG	5 cut(s)	166, 1077, 1078, 1384, 2339
Bse1I	ACTGG	2 cut(s)	160, 1167
Bse3DI	GCAATG	3 cut(s)	945, 1268, 2333
Bse8I	GATNNNNATC	2 cut(s)	2116, 2399
BseBI	CCWGG	6 cut(s)	800, 1565, 1579, 1719, 1829, 1997
BseCI	ATCGAT	2 cut(s)	782, 2393
BseDI	CCNNGG	6 cut(s)	543, 817, 1718, 1995, 2155, 2370
BseGI	GGATG	4 cut(s)	1729, 2145, 2304, 2366
BseJI	GATNNNNATC	2 cut(s)	2116, 2399
BseLI	CCNNNNNNNGG	5 cut(s)	166, 1077, 1078, 1384, 2339
BseMI	GCAATG	3 cut(s)	945, 1268, 2333
BseMII	CTCAG	2 cut(s)	700, 921
BseNI	ACTGG	2 cut(s)	160, 1167
BseRI	GAGGAG	2 cut(s)	278, 2045
BseYI	CCCAGC	2 cut(s)	1871, 2245
BsgI	GTGCAG	1 cut(s)	1047
BshFI	GGCC	7 cut(s)	243, 542, 656, 1442, 1710, 1882, 2018
BshNI	GGYRCC	3 cut(s)	1354, 2095, 2356
BshVI	ATCGAT	2 cut(s)	782, 2393
BsiHKAI	GWGCWC	1 cut(s)	1141
BsiHKCI	CYCGRG	1 cut(s)	2370
BsiSI	CCGG	1 cut(s)	2371
BslI	CCNNNNNNNGG	5 cut(s)	166, 1077, 1078, 1384, 2339
BsmAI	GTCTC	5 cut(s)	108, 260, 329, 910, 1985
BsmI	GAATGC	2 cut(s)	1987, 2349
BsnI	GGCC	7 cut(s)	243, 542, 656, 1442, 1710, 1882, 2018
Bso31I	GGTCTC	2 cut(s)	329, 1985
BsoBI	CYCGRG	1 cut(s)	2370
Bsp119I	TTCGAA	1 cut(s)	504
Bsp1286I	GDGCHC	2 cut(s)	1141, 2164
Bsp143I	GATC	7 cut(s)	1679, 1741, 1925, 2111, 2390, 2394, 2400
BspACI	CCGC	5 cut(s)	1001, 1096, 1419, 1942, 2208
BspANI	GGCC	7 cut(s)	243, 542, 656, 1442, 1710, 1882, 2018
BspCNI	CTCAG	2 cut(s)	699, 920
BspDI	ATCGAT	2 cut(s)	782, 2393
BspLI	GGNNCC	5 cut(s)	192, 1356, 2097, 2161, 2358
BspMAI	CTGCAG	3 cut(s)	697, 844, 1920
BspPI	GGATC	2 cut(s)	1749, 2398
BspQI	GCTCTTC	1 cut(s)	667
BspT104I	TTCGAA	1 cut(s)	504
BspT107I	GGYRCC	3 cut(s)	1354, 2095, 2356
BspTNI	GGTCTC	2 cut(s)	329, 1985
BsrBI	CCGCTC	1 cut(s)	1942
BsrDI	GCAATG	3 cut(s)	945, 1268, 2333
BsrI	ACTGG	2 cut(s)	160, 1167
BssECI	CCNNGG	6 cut(s)	543, 817, 1718, 1995, 2155, 2370
BssMI	GATC	7 cut(s)	1679, 1741, 1925, 2111, 2390, 2394, 2400
BssNI	GRCGYC	1 cut(s)	2107
BssT1I	CCWWGG	1 cut(s)	543
Bst2UI	CCWGG	6 cut(s)	800, 1565, 1579, 1719, 1829, 1997
Bst4CI	ACNGT	5 cut(s)	744, 769, 1200, 1433, 1674
Bst6I	CTCTTC	3 cut(s)	667, 1344, 1581
BstACI	GRCGYC	1 cut(s)	2107
BstAPI	GCANNNNNTGC	4 cut(s)	433, 944, 1157, 2081
BstBAI	YACGTR	2 cut(s)	187, 866
BstBI	TTCGAA	1 cut(s)	504
BstC8I	GCNNGC	7 cut(s)	241, 478, 574, 805, 824, 1894, 2377
BstDEI	CTNAG	4 cut(s)	638, 686, 907, 1103
BstDSI	CCRYGG	2 cut(s)	817, 2155
BstF5I	GGATG	4 cut(s)	1729, 2145, 2304, 2366
BstH2I	RGCGCY	1 cut(s)	85
BstHHI	GCGC	3 cut(s)	84, 438, 2064
BstKTI	GATC	7 cut(s)	1682, 1744, 1928, 2114, 2393, 2397, 2403
BstMAI	GTCTC	5 cut(s)	108, 260, 329, 910, 1985
BstMBI	GATC	7 cut(s)	1679, 1741, 1925, 2111, 2390, 2394, 2400
BstNI	CCWGG	6 cut(s)	800, 1565, 1579, 1719, 1829, 1997
BstNSI	RCATGY	1 cut(s)	826
BstSCI	CCNGG	8 cut(s)	798, 1563, 1577, 1717, 1827, 1995, 2369, 2370
BstSFI	CTRYAG	5 cut(s)	348, 693, 840, 1196, 1916
BstSNI	TACGTA	1 cut(s)	866
BstV2I	GAAGAC	1 cut(s)	805
BstX2I	RGATCY	1 cut(s)	1741
BstYI	RGATCY	1 cut(s)	1741
Bsu15I	ATCGAT	2 cut(s)	782, 2393
BsuI	GTATCC	1 cut(s)	2209
BsuRI	GGCC	7 cut(s)	243, 542, 656, 1442, 1710, 1882, 2018
BsuTUI	ATCGAT	2 cut(s)	782, 2393
BtgI	CCRYGG	2 cut(s)	817, 2155
BtgZI	GCGATG	1 cut(s)	106
BtrI	CACGTC	1 cut(s)	716
BtsCI	GGATG	4 cut(s)	1729, 2145, 2304, 2366
BtsI	GCAGTG	4 cut(s)	752, 849, 1395, 1925
BtsIMutI	CAGTG	6 cut(s)	752, 849, 1160, 1395, 1925, 2413
Cac8I	GCNNGC	7 cut(s)	241, 478, 574, 805, 824, 1894, 2377
CaiI	CAGNNNCTG	1 cut(s)	433
CfoI	GCGC	3 cut(s)	84, 438, 2064
Cfr13I	GGNCC	2 cut(s)	142, 1674
Cfr9I	CCCGGG	1 cut(s)	2370
ClaI	ATCGAT	2 cut(s)	782, 2393
Csp6I	GTAC	4 cut(s)	683, 690, 719, 2242
CviAII	CATG	6 cut(s)	16, 35, 577, 823, 902, 1645
CviQI	GTAC	4 cut(s)	683, 690, 719, 2242
DdeI	CTNAG	4 cut(s)	638, 686, 907, 1103
DpnI	GATC	7 cut(s)	1681, 1743, 1927, 2113, 2392, 2396, 2402
DpnII	GATC	7 cut(s)	1679, 1741, 1925, 2111, 2390, 2394, 2400
DraI	TTTAAA	2 cut(s)	967, 1437
EaeI	YGGCCR	2 cut(s)	654, 1708
Eam1104I	CTCTTC	3 cut(s)	667, 1344, 1581
EarI	CTCTTC	3 cut(s)	667, 1344, 1581
EciI	GGCGGA	1 cut(s)	2223
Eco105I	TACGTA	1 cut(s)	866
Eco130I	CCWWGG	1 cut(s)	543
Eco147I	AGGCCT	4 cut(s)	243, 542, 1442, 1882
Eco24I	GRGCYC	1 cut(s)	2164
Eco31I	GGTCTC	2 cut(s)	329, 1985
Eco32I	GATATC	1 cut(s)	2011
Eco47I	GGWCC	2 cut(s)	142, 1674
Eco47III	AGCGCT	1 cut(s)	83
Eco57I	CTGAAG	3 cut(s)	699, 980, 1740
Eco88I	CYCGRG	1 cut(s)	2370
EcoO109I	RGGNCCY	1 cut(s)	142
EcoRI	GAATTC	3 cut(s)	506, 956, 1264
EcoRII	CCWGG	6 cut(s)	798, 1563, 1577, 1717, 1827, 1995
EcoRV	GATATC	1 cut(s)	2011
EcoT14I	CCWWGG	1 cut(s)	543
EcoT22I	ATGCAT	1 cut(s)	1309
EcoT38I	GRGCYC	1 cut(s)	2164
ErhI	CCWWGG	1 cut(s)	543
FaeI	CATG	6 cut(s)	19, 38, 580, 826, 905, 1648
FalI	AAGNNNNNCTT	4 cut(s)	787, 819, 1578, 1610
FatI	CATG	6 cut(s)	15, 34, 576, 822, 901, 1644
FauI	CCCGC	1 cut(s)	1089
FauNDI	CATATG	1 cut(s)	2278
FblI	GTMKAC	1 cut(s)	29
FokI	GGATG	4 cut(s)	1736, 2152, 2311, 2353
FriOI	GRGCYC	1 cut(s)	2164
FspBI	CTAG	6 cut(s)	489, 735, 914, 1226, 1583, 1947
GlaI	GCGC	3 cut(s)	83, 437, 2063
GsaI	CCCAGC	2 cut(s)	1875, 2249
GsuI	CTGGAG	3 cut(s)	156, 1547, 2042
HaeII	RGCGCY	1 cut(s)	85
HaeIII	GGCC	7 cut(s)	243, 542, 656, 1442, 1710, 1882, 2018
HapII	CCGG	1 cut(s)	2371
HhaI	GCGC	3 cut(s)	84, 438, 2064
Hin1I	GRCGYC	1 cut(s)	2107
Hin1II	CATG	6 cut(s)	19, 38, 580, 826, 905, 1648
Hin6I	GCGC	3 cut(s)	82, 436, 2062
HinP1I	GCGC	3 cut(s)	82, 436, 2062
HincII	GTYRAC	2 cut(s)	30, 1429
HindII	GTYRAC	2 cut(s)	30, 1429
HindIII	AAGCTT	3 cut(s)	311, 1592, 2377
HinfI	GANTC	7 cut(s)	519, 1298, 1409, 1451, 1607, 1772, 2302
HpaII	CCGG	1 cut(s)	2371
Hpy166II	GTNNAC	6 cut(s)	30, 418, 719, 869, 1429, 1762
Hpy8I	GTNNAC	6 cut(s)	30, 418, 719, 869, 1429, 1762
Hpy99I	CGWCG	3 cut(s)	717, 2109, 2112
HpyAV	CCTTC	6 cut(s)	542, 589, 1312, 1764, 1922, 2130
HpyCH4III	ACNGT	5 cut(s)	744, 769, 1200, 1433, 1674
HpyCH4IV	ACGT	6 cut(s)	186, 414, 715, 865, 1210, 2107
HpyF3I	CTNAG	4 cut(s)	638, 686, 907, 1103
HpySE526I	ACGT	6 cut(s)	186, 414, 715, 865, 1210, 2107
Hsp92I	GRCGYC	1 cut(s)	2107
Hsp92II	CATG	6 cut(s)	19, 38, 580, 826, 905, 1648
HspAI	GCGC	3 cut(s)	82, 436, 2062
Kzo9I	GATC	7 cut(s)	1679, 1741, 1925, 2111, 2390, 2394, 2400
LguI	GCTCTTC	1 cut(s)	667
LmnI	GCTCC	4 cut(s)	215, 1136, 1566, 2159
LweI	GCATC	4 cut(s)	655, 1147, 1714, 1905
MaeI	CTAG	6 cut(s)	489, 735, 914, 1226, 1583, 1947
MaeII	ACGT	6 cut(s)	186, 414, 715, 865, 1210, 2107
MalI	GATC	7 cut(s)	1681, 1743, 1927, 2113, 2392, 2396, 2402
MbiI	CCGCTC	1 cut(s)	1942
MboI	GATC	7 cut(s)	1679, 1741, 1925, 2111, 2390, 2394, 2400
MflI	RGATCY	1 cut(s)	1741
MhlI	GDGCHC	2 cut(s)	1141, 2164
MlsI	TGGCCA	1 cut(s)	1710
MluNI	TGGCCA	1 cut(s)	1710
MlyI	GAGTC	2 cut(s)	1460, 1781
MmeI	TCCRAC	2 cut(s)	1182, 1755
Mox20I	TGGCCA	1 cut(s)	1710
Mph1103I	ATGCAT	1 cut(s)	1309
MscI	TGGCCA	1 cut(s)	1710
MslI	CAYNNNNRTG	1 cut(s)	14
Msp20I	TGGCCA	1 cut(s)	1710
MspA1I	CMGCKG	2 cut(s)	839, 1700
MspI	CCGG	1 cut(s)	2371
MspR9I	CCNGG	8 cut(s)	800, 1565, 1579, 1719, 1829, 1997, 2371, 2372
Mva1269I	GAATGC	2 cut(s)	1987, 2349
MvaI	CCWGG	6 cut(s)	800, 1565, 1579, 1719, 1829, 1997
NciI	CCSGG	2 cut(s)	2371, 2372
NdeI	CATATG	1 cut(s)	2278
NdeII	GATC	7 cut(s)	1679, 1741, 1925, 2111, 2390, 2394, 2400
NlaIII	CATG	6 cut(s)	19, 38, 580, 826, 905, 1648
NlaIV	GGNNCC	5 cut(s)	192, 1356, 2097, 2161, 2358
NmeAIII	GCCGAG	1 cut(s)	682
NsiI	ATGCAT	1 cut(s)	1309
NspI	RCATGY	1 cut(s)	826
NspV	TTCGAA	1 cut(s)	504
PaeI	GCATGC	1 cut(s)	826
PceI	AGGCCT	4 cut(s)	243, 542, 1442, 1882
PciSI	GCTCTTC	1 cut(s)	667
PctI	GAATGC	2 cut(s)	1987, 2349
PfeI	GAWTC	5 cut(s)	519, 1298, 1409, 1607, 2302
PflMI	CCANNNNNTGG	3 cut(s)	166, 1384, 2339
PfoI	TCCNGGA	1 cut(s)	1563
PleI	GAGTC	2 cut(s)	1459, 1780
PpsI	GAGTC	2 cut(s)	1459, 1780
Ppu21I	YACGTR	2 cut(s)	187, 866
PpuMI	RGGWCCY	1 cut(s)	142
PshBI	ATTAAT	1 cut(s)	329
PsiI	TTATAA	1 cut(s)	89
Psp1406I	AACGTT	1 cut(s)	1210
Psp5II	RGGWCCY	1 cut(s)	142
Psp6I	CCWGG	6 cut(s)	798, 1563, 1577, 1717, 1827, 1995
PspFI	CCCAGC	2 cut(s)	1871, 2245
PspGI	CCWGG	6 cut(s)	798, 1563, 1577, 1717, 1827, 1995
PspN4I	GGNNCC	5 cut(s)	192, 1356, 2097, 2161, 2358
PspPI	GGNCC	2 cut(s)	142, 1674
PspPPI	RGGWCCY	1 cut(s)	142
PstI	CTGCAG	3 cut(s)	697, 844, 1920
PstNI	CAGNNNCTG	1 cut(s)	433
PsuI	RGATCY	1 cut(s)	1741
PvuII	CAGCTG	2 cut(s)	839, 1700
RsaI	GTAC	4 cut(s)	684, 691, 720, 2243
RsaNI	GTAC	4 cut(s)	683, 690, 719, 2242
RseI	CAYNNNNRTG	1 cut(s)	14
SalI	GTCGAC	1 cut(s)	28
SapI	GCTCTTC	1 cut(s)	667
Sau3AI	GATC	7 cut(s)	1679, 1741, 1925, 2111, 2390, 2394, 2400
Sau96I	GGNCC	2 cut(s)	142, 1674
ScaI	AGTACT	2 cut(s)	684, 691
SchI	GAGTC	2 cut(s)	1460, 1781
ScrFI	CCNGG	8 cut(s)	800, 1565, 1579, 1719, 1829, 1997, 2371, 2372
SduI	GDGCHC	2 cut(s)	1141, 2164
SfaNI	GCATC	4 cut(s)	655, 1147, 1714, 1905
SfcI	CTRYAG	5 cut(s)	348, 693, 840, 1196, 1916
SfuI	TTCGAA	1 cut(s)	504
SinI	GGWCC	2 cut(s)	142, 1674
SmaI	CCCGGG	1 cut(s)	2372
SmiMI	CAYNNNNRTG	1 cut(s)	14
SmlI	CTYRAG	2 cut(s)	1043, 2166
SmoI	CTYRAG	2 cut(s)	1043, 2166
SnaBI	TACGTA	1 cut(s)	866
SphI	GCATGC	1 cut(s)	826
SseBI	AGGCCT	4 cut(s)	243, 542, 1442, 1882
SsiI	CCGC	5 cut(s)	1001, 1096, 1419, 1942, 2208
SspMI	CTAG	6 cut(s)	489, 735, 914, 1226, 1583, 1947
StuI	AGGCCT	4 cut(s)	243, 542, 1442, 1882
StyD4I	CCNGG	8 cut(s)	798, 1563, 1577, 1717, 1827, 1995, 2369, 2370
StyI	CCWWGG	1 cut(s)	543
TaaI	ACNGT	5 cut(s)	744, 769, 1200, 1433, 1674
TaiI	ACGT	6 cut(s)	189, 417, 718, 868, 1213, 2110
TatI	WGTACW	2 cut(s)	682, 689
TfiI	GAWTC	5 cut(s)	519, 1298, 1409, 1607, 2302
TscAI	CASTG	5 cut(s)	759, 849, 1167, 1402, 1925
TspGWI	ACGGA	2 cut(s)	125, 2144
TspMI	CCCGGG	1 cut(s)	2370
TspRI	CASTG	5 cut(s)	759, 849, 1167, 1402, 1925
Van91I	CCANNNNNTGG	3 cut(s)	166, 1384, 2339
VpaK11BI	GGWCC	2 cut(s)	142, 1674
VspI	ATTAAT	1 cut(s)	329
XapI	RAATTY	6 cut(s)	506, 849, 956, 1264, 1570, 1658
XceI	RCATGY	1 cut(s)	826
XmaI	CCCGGG	1 cut(s)	2370
XmiI	GTMKAC	1 cut(s)	29
XspI	CTAG	6 cut(s)	489, 735, 914, 1226, 1583, 1947
ZraI	GACGTC	1 cut(s)	2108
ZrmI	AGTACT	2 cut(s)	684, 691
Zsp2I	ATGCAT	1 cut(s)	1309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.