Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0005571

Physical Location & Seq

Genomic Coordinates Forward (+)

74231116 .. 74234274

Gene Structure 3159 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0626400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1278 bp

ATGCGCGTTGCGAATCCACACTCATTTCGTTTCCTCACAGCCGTAAAGAACCGCTACCTCTTTCTCTCCTGCTCCTCCGTTTCTCTCTCTAAACCTCGCTCACCGACTCTGCTACCCCAAACCCTAGCAATGGCCTCCGACGACCTCTCCACCCTGTCCGCCGCCGCCGATGACGAGAAGTACGGGTTCAAGAGGCCGGAGATGTTCCAGAGCAAGCTCGCCGGCACCGTCGACGCCTACGACCGCCACGTGTTCCTCTGCTACAAGAGCCCCGAGGCCTGGCCCGCTCGCGTTGAAGGCTCCGAGTCCGATCCGCTTCCCAAGCTCCTCTCCTCGGCTTTCAAGGCCCGCAAGAACGATATCTCGATCAAGACTAAGCTGACGGTGTGTGAAGGGCGCGACGGAACTGAATTCGCTGACGGCGATGTGTTGATTTTCCCGGATATGATCAAATACCGGGGCTTGAAAGAGTCAGATGTTGATAGCTTTGTGGATGATGTTATCGTGAATGATAAAGCATGGGCATCTGGAGCACAGGAGGTCTTGACTGGTTCTCACGTTTTTGTGTGTGCCCATGGTAGTCGAGATCGTAGATGTGGTGTTTGTGGACCTGTTCTCATTGATAAATTCATAGAGGAGGCTGAATTGCGAGGACTGAAGGATCAGGTGTTTGTTAGTCCCTGTTCTCACATTGGGGGCCACAAGTATGCTGGGAACTTGATTATCTACAGCCCTGGTGCAGATGGAAAGATCACTGGTCACTGGTATGGCTATGTTGCTCCTGATGATGTACCGGAATTGCTTGATGAGCATATTGGGAAAGGGAAGATTATAGAACGATTATGGAGAGGCGAAATGGGAGTATCTGCTGAGGAAGCTGAAAAAGCTAATGAACACAAGCTTCCAAATGGAGAAAGTGAAAAATTTAAGGACAAGAAGCTTCCAATTGGAGAAGGTTCTAAGAAAAGCAAGGAAAATCCCCAAGAAAACGGCACTCAGATTCAGAACAGCAATGAGAACTTTGCAGGTTGTTGCCAGGGTGCTAATGGAGTCTCATGCTGCAGAGATGGAAATTTTGAGCAGAACAGTGGAATTGAGGAAAAGAAGCAGAAAGAAACTACAGAAGCTAGCAGTGGCAAGAAGGATGCATTGGGATGCAAACTGACAAGCTACATGGGAAAGTGGGAGCAAAGTGATATCCTTGCAGCTGTCGCTGTGGTGGGAGCAGTGGCAACCGTGGGTGTGGCGGTCTATAGCTTTTACAGAAGGTCAGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000146 GO:0000166 GO:0000331 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0006928 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008144 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015629 GO:0016043 GO:0016049 GO:0016459 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022414 GO:0030029 GO:0030036 GO:0030048 GO:0030154 GO:0030554 GO:0030898 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0033275 GO:0035639 GO:0036094 GO:0040007 GO:0042623 GO:0042641 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043531 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0044877 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051015 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051656 GO:0051704 GO:0060560 GO:0070252 GO:0071840 GO:0097159 GO:0097367 GO:0097435 GO:0097708 GO:0140027 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DIL IQ Myosin_N Myosin_head

Protein Analysis

425

Amino Acids

46.42

Weight (kDa)

6.06

Isoelectric Point (pI)

33.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suc_Fer-like	PF06999	73 - 284	8.4e-47	Sucrase/ferredoxin-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08730 AT1G08730 AT1G54560 AT1G54560
fragaria_vesca	FvH4_6g02450 FvH4_6g02450
malus_domestica	MD04G1227800.v1.1 MD12G1244600.v1.1
prunus_persica	Prupe.6G347100_v2.0.a1 Prupe.6G347100_v2.0.a1 Prupe.6G347100_v2.0.a1 Prupe.6G347100_v2.0.a1
pyrus_communis	pycom04g20130 pycom04g20140 pycom04g20150 pycom12g22440
rosa_chinensis	RchiOBHm_Chr3g0450241 RchiOBHm_Chr3g0450271
rosa_laevigata	RLG00000025743 RLG00000025747
rosa_multiflora	Rmu_sc0010184.1_g000002
rosa_roxburghii	Rroxscaffold_6G00427950
rosa_rugosa	Rorug02G0626300 Rorug02G0626400
rosa_samantha	Rh3AG025600 Rh3BG026300 Rh3CG025300
rosa_wichuraiana	Rw3G002080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1016
AccB1I	GGYRCC	1 cut(s)	224
AccBSI	CCGCTC	1 cut(s)	287
AccI	GTMKAC	1 cut(s)	231
AccII	CGCG	3 cut(s)	6, 291, 399
AciI	CCGC	9 cut(s)	52, 159, 162, 165, 244, 285, 314, 349, 1247
AclWI	GGATC	2 cut(s)	305, 669
AcsI	RAATTY	4 cut(s)	410, 626, 923, 1072
AcuI	CTGAAG	1 cut(s)	677
AcvI	CACGTG	1 cut(s)	250
AcyI	GRCGYC	1 cut(s)	234
AfaI	GTAC	2 cut(s)	182, 792
AfiI	CCNNNNNNNGG	3 cut(s)	130, 279, 334
AflIII	ACRYGT	1 cut(s)	249
AgsI	TTSAA	4 cut(s)	190, 296, 343, 466
AjnI	CCWGG	3 cut(s)	278, 733, 1035
AjuI	GAANNNNNNNTTGG	2 cut(s)	1133, 1165
Alw21I	GWGCWC	1 cut(s)	535
Alw26I	GTCTC	1 cut(s)	1057
AlwI	GGATC	2 cut(s)	305, 669
Ama87I	CYCGRG	1 cut(s)	272
AoxI	GGCC	6 cut(s)	132, 194, 276, 281, 345, 697
ApeKI	GCWGC	2 cut(s)	1059, 1205
ApoI	RAATTY	4 cut(s)	410, 626, 923, 1072
AspLEI	GCGC	2 cut(s)	6, 399
AspS9I	GGNCC	4 cut(s)	282, 346, 608, 697
AsuC2I	CCSGG	2 cut(s)	440, 458
AsuHPI	GGTGA	1 cut(s)	93
AsuNHI	GCTAGC	1 cut(s)	1127
AvaI	CYCGRG	1 cut(s)	272
AvaII	GGWCC	1 cut(s)	608
BaeGI	GKGCMC	1 cut(s)	574
BanI	GGYRCC	1 cut(s)	224
BanII	GRGCYC	1 cut(s)	272
BbrPI	CACGTG	1 cut(s)	250
Bbv12I	GWGCWC	1 cut(s)	535
BbvCI	CCTCAGC	1 cut(s)	870
BbvI	GCAGC	2 cut(s)	1046, 1217
BccI	CCATC	2 cut(s)	737, 1061
BceAI	ACGGC	3 cut(s)	26, 436, 1006
BciT130I	CCWGG	3 cut(s)	280, 735, 1037
BclI	TGATCA	1 cut(s)	447
BcnI	CCSGG	2 cut(s)	440, 458
BcoDI	GTCTC	1 cut(s)	1057
BfaI	CTAG	2 cut(s)	125, 1128
BfmI	CTRYAG	4 cut(s)	727, 1060, 1119, 1252
BfuAI	ACCTGC	1 cut(s)	1016
BisI	GCNGC	4 cut(s)	162, 165, 1060, 1206
BlsI	GCNGC	4 cut(s)	163, 166, 1061, 1207
Bme1390I	CCNGG	5 cut(s)	280, 440, 458, 735, 1037
Bme18I	GGWCC	1 cut(s)	608
BmeT110I	CYCGRG	1 cut(s)	272
BmgT120I	GGNCC	4 cut(s)	282, 346, 608, 697
BmiI	GGNNCC	3 cut(s)	226, 301, 698
BmrFI	CCNGG	5 cut(s)	280, 440, 458, 735, 1037
BmsI	GCATC	3 cut(s)	533, 1135, 1145
BmtI	GCTAGC	1 cut(s)	1131
BpmI	CTGGAG	1 cut(s)	549
Bpu10I	CCTNAGC	1 cut(s)	870
BpuMI	CCSGG	2 cut(s)	440, 458
BsaAI	YACGTR	1 cut(s)	250
BsaHI	GRCGYC	1 cut(s)	234
BsaJI	CCNNGG	7 cut(s)	273, 333, 457, 574, 733, 1036, 1236
BsaWI	WCCGGW	1 cut(s)	793
BsaXI	ACNNNNNCTCC	2 cut(s)	131, 161
Bsc4I	CCNNNNNNNGG	3 cut(s)	130, 279, 334
Bse118I	RCCGGY	1 cut(s)	221
Bse1I	ACTGG	3 cut(s)	553, 760, 767
Bse3DI	GCAATG	2 cut(s)	135, 1018
BseBI	CCWGG	3 cut(s)	280, 735, 1037
BseDI	CCNNGG	7 cut(s)	273, 333, 457, 574, 733, 1036, 1236
BseGI	GGATG	3 cut(s)	499, 1150, 1160
BseLI	CCNNNNNNNGG	3 cut(s)	130, 279, 334
BseMI	GCAATG	2 cut(s)	135, 1018
BseMII	CTCAG	2 cut(s)	861, 1010
BseNI	ACTGG	3 cut(s)	553, 760, 767
BseRI	GAGGAG	4 cut(s)	64, 317, 322, 650
BseSI	GKGCMC	1 cut(s)	574
BseXI	GCAGC	2 cut(s)	1046, 1217
BseYI	CCCAGC	1 cut(s)	710
BsgI	GTGCAG	1 cut(s)	759
Bsh1236I	CGCG	3 cut(s)	6, 291, 399
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	6 cut(s)	134, 196, 278, 283, 347, 699
BshNI	GGYRCC	1 cut(s)	224
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	1 cut(s)	535
BsiHKCI	CYCGRG	1 cut(s)	272
BsiSI	CCGG	5 cut(s)	197, 222, 440, 457, 794
BslFI	GGGAC	1 cut(s)	663
BslI	CCNNNNNNNGG	3 cut(s)	130, 279, 334
BsmAI	GTCTC	1 cut(s)	1057
BsmFI	GGGAC	1 cut(s)	663
BsnI	GGCC	6 cut(s)	134, 196, 278, 283, 347, 699
BsoBI	CYCGRG	1 cut(s)	272
Bsp1286I	GDGCHC	3 cut(s)	272, 535, 574
Bsp143I	GATC	6 cut(s)	310, 366, 447, 586, 661, 750
Bsp19I	CCATGG	1 cut(s)	574
BspACI	CCGC	9 cut(s)	52, 159, 162, 165, 244, 285, 314, 349, 1247
BspANI	GGCC	6 cut(s)	134, 196, 278, 283, 347, 699
BspCNI	CTCAG	2 cut(s)	862, 1009
BspFNI	CGCG	3 cut(s)	6, 291, 399
BspLI	GGNNCC	3 cut(s)	226, 301, 698
BspMAI	CTGCAG	1 cut(s)	1064
BspMI	ACCTGC	1 cut(s)	1016
BspOI	GCTAGC	1 cut(s)	1131
BspPI	GGATC	2 cut(s)	305, 669
BspT107I	GGYRCC	1 cut(s)	224
BsrBI	CCGCTC	1 cut(s)	287
BsrDI	GCAATG	2 cut(s)	135, 1018
BsrFI	RCCGGY	1 cut(s)	221
BsrI	ACTGG	3 cut(s)	553, 760, 767
BssAI	RCCGGY	1 cut(s)	221
BssECI	CCNNGG	7 cut(s)	273, 333, 457, 574, 733, 1036, 1236
BssMI	GATC	6 cut(s)	310, 366, 447, 586, 661, 750
BssNI	GRCGYC	1 cut(s)	234
BssT1I	CCWWGG	1 cut(s)	574
Bst2UI	CCWGG	3 cut(s)	280, 735, 1037
Bst4CI	ACNGT	4 cut(s)	229, 385, 1088, 1237
BstACI	GRCGYC	1 cut(s)	234
BstBAI	YACGTR	1 cut(s)	250
BstC8I	GCNNGC	7 cut(s)	215, 219, 223, 285, 289, 349, 1129
BstDEI	CTNAG	4 cut(s)	375, 870, 960, 996
BstDSI	CCRYGG	2 cut(s)	574, 1236
BstF5I	GGATG	3 cut(s)	499, 1150, 1160
BstFNI	CGCG	3 cut(s)	6, 291, 399
BstHHI	GCGC	2 cut(s)	6, 399
BstKTI	GATC	6 cut(s)	313, 369, 450, 589, 664, 753
BstMAI	GTCTC	1 cut(s)	1057
BstMBI	GATC	6 cut(s)	310, 366, 447, 586, 661, 750
BstMCI	CGRYCG	1 cut(s)	244
BstNI	CCWGG	3 cut(s)	280, 735, 1037
BstSCI	CCNGG	5 cut(s)	278, 438, 456, 733, 1035
BstSFI	CTRYAG	4 cut(s)	727, 1060, 1119, 1252
BstSLI	GKGCMC	1 cut(s)	574
BstUI	CGCG	3 cut(s)	6, 291, 399
BstV1I	GCAGC	2 cut(s)	1046, 1217
BsuRI	GGCC	6 cut(s)	134, 196, 278, 283, 347, 699
BtgI	CCRYGG	2 cut(s)	574, 1236
BtgZI	GCGATG	1 cut(s)	438
BtsCI	GGATG	3 cut(s)	499, 1150, 1160
BtsI	GCAGTG	2 cut(s)	1138, 1233
BtsIMutI	CAGTG	5 cut(s)	753, 760, 1093, 1138, 1233
BveI	ACCTGC	1 cut(s)	1016
Cac8I	GCNNGC	7 cut(s)	215, 219, 223, 285, 289, 349, 1129
CfoI	GCGC	2 cut(s)	6, 399
Cfr10I	RCCGGY	1 cut(s)	221
Cfr13I	GGNCC	4 cut(s)	282, 346, 608, 697
CseI	GACGC	1 cut(s)	242
Csp6I	GTAC	2 cut(s)	181, 791
CviAII	CATG	4 cut(s)	519, 575, 1056, 1174
CviQI	GTAC	2 cut(s)	181, 791
DdeI	CTNAG	4 cut(s)	375, 870, 960, 996
DpnI	GATC	6 cut(s)	312, 368, 449, 588, 663, 752
DpnII	GATC	6 cut(s)	310, 366, 447, 586, 661, 750
EciI	GGCGGA	1 cut(s)	148
Eco130I	CCWWGG	1 cut(s)	574
Eco147I	AGGCCT	1 cut(s)	278
Eco24I	GRGCYC	1 cut(s)	272
Eco32I	GATATC	2 cut(s)	361, 1198
Eco47I	GGWCC	1 cut(s)	608
Eco57I	CTGAAG	1 cut(s)	677
Eco72I	CACGTG	1 cut(s)	250
Eco88I	CYCGRG	1 cut(s)	272
EcoRI	GAATTC	1 cut(s)	410
EcoRII	CCWGG	3 cut(s)	278, 733, 1035
EcoRV	GATATC	2 cut(s)	361, 1198
EcoT14I	CCWWGG	1 cut(s)	574
EcoT22I	ATGCAT	1 cut(s)	1150
EcoT38I	GRGCYC	1 cut(s)	272
ErhI	CCWWGG	1 cut(s)	574
FaeI	CATG	4 cut(s)	522, 578, 1059, 1177
FaqI	GGGAC	1 cut(s)	663
FatI	CATG	4 cut(s)	518, 574, 1055, 1173
FauI	CCCGC	2 cut(s)	292, 356
FbaI	TGATCA	1 cut(s)	447
FblI	GTMKAC	1 cut(s)	231
Fnu4HI	GCNGC	4 cut(s)	162, 165, 1060, 1206
FokI	GGATG	3 cut(s)	506, 1157, 1167
FriOI	GRGCYC	1 cut(s)	272
Fsp4HI	GCNGC	4 cut(s)	162, 165, 1060, 1206
FspBI	CTAG	2 cut(s)	125, 1128
GlaI	GCGC	2 cut(s)	5, 398
GluI	GCNGC	4 cut(s)	162, 165, 1060, 1206
GsaI	CCCAGC	1 cut(s)	714
GsuI	CTGGAG	1 cut(s)	549
HaeIII	GGCC	6 cut(s)	134, 196, 278, 283, 347, 699
HapII	CCGG	5 cut(s)	197, 222, 440, 457, 794
HgaI	GACGC	1 cut(s)	242
HhaI	GCGC	2 cut(s)	6, 399
Hin1I	GRCGYC	1 cut(s)	234
Hin1II	CATG	4 cut(s)	522, 578, 1059, 1177
Hin6I	GCGC	2 cut(s)	4, 397
HinP1I	GCGC	2 cut(s)	4, 397
HincII	GTYRAC	1 cut(s)	232
HindII	GTYRAC	1 cut(s)	232
HindIII	AAGCTT	2 cut(s)	899, 938
HinfI	GANTC	6 cut(s)	13, 106, 305, 470, 1000, 1050
HpaII	CCGG	5 cut(s)	197, 222, 440, 457, 794
HphI	GGTGA	1 cut(s)	93
Hpy166II	GTNNAC	2 cut(s)	232, 608
Hpy188I	TCNGA	6 cut(s)	139, 304, 310, 475, 999, 1005
Hpy188III	TCNNGA	9 cut(s)	190, 208, 364, 370, 505, 528, 544, 584, 782
Hpy8I	GTNNAC	2 cut(s)	232, 608
Hpy99I	CGWCG	4 cut(s)	143, 233, 236, 404
HpyAV	CCTTC	6 cut(s)	290, 386, 652, 947, 1135, 1260
HpyCH4III	ACNGT	4 cut(s)	229, 385, 1088, 1237
HpyCH4IV	ACGT	2 cut(s)	249, 558
HpyCH4V	TGCA	6 cut(s)	740, 1025, 1062, 1148, 1158, 1205
HpyF3I	CTNAG	4 cut(s)	375, 870, 960, 996
HpySE526I	ACGT	2 cut(s)	249, 558
Hsp92I	GRCGYC	1 cut(s)	234
Hsp92II	CATG	4 cut(s)	522, 578, 1059, 1177
HspAI	GCGC	2 cut(s)	4, 397
KroI	GCCGGC	1 cut(s)	221
KroNI	GCCGGC	1 cut(s)	223
Ksp22I	TGATCA	1 cut(s)	447
Kzo9I	GATC	6 cut(s)	310, 366, 447, 586, 661, 750
LmnI	GCTCC	7 cut(s)	77, 305, 330, 530, 784, 1186, 1223
Lsp1109I	GCAGC	2 cut(s)	1046, 1217
LweI	GCATC	3 cut(s)	533, 1135, 1145
MaeI	CTAG	2 cut(s)	125, 1128
MaeII	ACGT	2 cut(s)	249, 558
MaeIII	GTNAC	1 cut(s)	758
MalI	GATC	6 cut(s)	312, 368, 449, 588, 663, 752
MbiI	CCGCTC	1 cut(s)	287
MboI	GATC	6 cut(s)	310, 366, 447, 586, 661, 750
MboII	GAAGA	1 cut(s)	838
MfeI	CAATTG	1 cut(s)	945
MhlI	GDGCHC	3 cut(s)	272, 535, 574
MluCI	AATT	8 cut(s)	410, 626, 644, 797, 923, 945, 1072, 1092
MlyI	GAGTC	4 cut(s)	100, 314, 479, 1059
MmeI	TCCRAC	1 cut(s)	162
Mph1103I	ATGCAT	1 cut(s)	1150
MroNI	GCCGGC	1 cut(s)	221
MseI	TTAA	1 cut(s)	927
MslI	CAYNNNNRTG	3 cut(s)	705, 765, 1153
MspA1I	CMGCKG	1 cut(s)	1208
MspI	CCGG	5 cut(s)	197, 222, 440, 457, 794
MspR9I	CCNGG	5 cut(s)	280, 440, 458, 735, 1037
MunI	CAATTG	1 cut(s)	945
MvaI	CCWGG	3 cut(s)	280, 735, 1037
MvnI	CGCG	3 cut(s)	6, 291, 399
NaeI	GCCGGC	1 cut(s)	223
NciI	CCSGG	2 cut(s)	440, 458
NcoI	CCATGG	1 cut(s)	574
NdeII	GATC	6 cut(s)	310, 366, 447, 586, 661, 750
NgoMIV	GCCGGC	1 cut(s)	221
NheI	GCTAGC	1 cut(s)	1127
NlaIII	CATG	4 cut(s)	522, 578, 1059, 1177
NlaIV	GGNNCC	3 cut(s)	226, 301, 698
NmeAIII	GCCGAG	1 cut(s)	314
NmuCI	GTSAC	1 cut(s)	758
NsiI	ATGCAT	1 cut(s)	1150
PceI	AGGCCT	1 cut(s)	278
PcsI	WCGNNNNNNNCGW	4 cut(s)	225, 237, 246, 420
PdiI	GCCGGC	1 cut(s)	223
PfeI	GAWTC	2 cut(s)	13, 1000
PfoI	TCCNGGA	1 cut(s)	438
PkrI	GCNGC	4 cut(s)	163, 166, 1061, 1207
PleI	GAGTC	4 cut(s)	100, 313, 478, 1058
PmaCI	CACGTG	1 cut(s)	250
PmlI	CACGTG	1 cut(s)	250
PpsI	GAGTC	4 cut(s)	100, 313, 478, 1058
Ppu21I	YACGTR	1 cut(s)	250
Psp6I	CCWGG	3 cut(s)	278, 733, 1035
PspCI	CACGTG	1 cut(s)	250
PspFI	CCCAGC	1 cut(s)	710
PspGI	CCWGG	3 cut(s)	278, 733, 1035
PspN4I	GGNNCC	3 cut(s)	226, 301, 698
PspPI	GGNCC	4 cut(s)	282, 346, 608, 697
PstI	CTGCAG	1 cut(s)	1064
PvuII	CAGCTG	1 cut(s)	1208
RsaI	GTAC	2 cut(s)	182, 792
RsaNI	GTAC	2 cut(s)	181, 791
RseI	CAYNNNNRTG	3 cut(s)	705, 765, 1153
SalI	GTCGAC	1 cut(s)	230
SaqAI	TTAA	1 cut(s)	927
SatI	GCNGC	4 cut(s)	162, 165, 1060, 1206
Sau3AI	GATC	6 cut(s)	310, 366, 447, 586, 661, 750
Sau96I	GGNCC	4 cut(s)	282, 346, 608, 697
SchI	GAGTC	4 cut(s)	100, 314, 479, 1059
ScrFI	CCNGG	5 cut(s)	280, 440, 458, 735, 1037
SduI	GDGCHC	3 cut(s)	272, 535, 574
SfaNI	GCATC	3 cut(s)	533, 1135, 1145
SfcI	CTRYAG	4 cut(s)	727, 1060, 1119, 1252
SgrDI	CGTCGACG	1 cut(s)	230
SinI	GGWCC	1 cut(s)	608
SmiMI	CAYNNNNRTG	3 cut(s)	705, 765, 1153
Sse9I	AATT	8 cut(s)	410, 626, 644, 797, 923, 945, 1072, 1092
SseBI	AGGCCT	1 cut(s)	278
SsiI	CCGC	9 cut(s)	52, 159, 162, 165, 244, 285, 314, 349, 1247
SspMI	CTAG	2 cut(s)	125, 1128
StuI	AGGCCT	1 cut(s)	278
StyD4I	CCNGG	5 cut(s)	278, 438, 456, 733, 1035
StyI	CCWWGG	1 cut(s)	574
TaaI	ACNGT	4 cut(s)	229, 385, 1088, 1237
TaiI	ACGT	2 cut(s)	252, 561
TaqI	TCGA	3 cut(s)	231, 365, 583
TasI	AATT	8 cut(s)	410, 626, 644, 797, 923, 945, 1072, 1092
TauI	GCSGC	2 cut(s)	164, 167
TfiI	GAWTC	2 cut(s)	13, 1000
Tru1I	TTAA	1 cut(s)	927
Tru9I	TTAA	1 cut(s)	927
TscAI	CASTG	5 cut(s)	760, 767, 1093, 1138, 1233
TseFI	GTSAC	1 cut(s)	758
TseI	GCWGC	2 cut(s)	1059, 1205
Tsp45I	GTSAC	1 cut(s)	758
TspDTI	ATGAA	2 cut(s)	619, 906
TspGWI	ACGGA	2 cut(s)	67, 417
TspRI	CASTG	5 cut(s)	760, 767, 1093, 1138, 1233
VpaK11BI	GGWCC	1 cut(s)	608
XapI	RAATTY	4 cut(s)	410, 626, 923, 1072
XcmI	CCANNNNNNNNNTGG	2 cut(s)	707, 1043
XmiI	GTMKAC	1 cut(s)	231
XspI	CTAG	2 cut(s)	125, 1128
Zsp2I	ATGCAT	1 cut(s)	1150

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.