Rw3G002080
ERF Family

Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
1812585 .. 1823524
10940 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G002080.1

Sequence Viewer

Length: 4587 bp
ATGGTATGTGCATGTTTTGGTTGGATGTGCTCTCATGTTTGGGTCGAAGACCCAGAATTGGCTTGGACGGATGGACAAGTCACAAAAATTAATGGACAGGAAGTTGAGATCCAGGGTAGCAATGGGAAGAAGATGGTTGCCAACTTATCAAAAATATATCCAAAAGACATGGAAGCTCCTGCTGGCGGAGTTGATGACATGACAAAGCTATCTTATCTGCATGAGCCTGGAGTTTTGGAGAATTTGAAAACTAGATACGAACTTAATGAAATCTATACGTATACTGGAAATATCCTTATTGCCATTAATCCATTCCAAAGACTGCCCCATATCTATGATAGTCACATGATGCAACAATACAAGGGAGCACCATTTGGAGAGCTAAGTCCTCATGTTTTTGCAGTTGCTGACGTTGCATACAGGGCAATGATTAATGAGGGAAAAAGCAATTCAATTCTGGTCAGTGGTGAAAGTGGAGCAGGTAAAACTGAGACCACAAAAATGCTCATGCGGTACCTTGCATTTCTCGGTGGCCGGGCTGCAACCGAAGGGCGGACAGTTGAACAGCAAGTTCTCGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCTAAAACTGTTAGAAATAACAATTCTAGTCGGTTTGGTAAGTTTGTTGAAATCCAGTTTGATAAGCAAGGAAGAATCTCTGGAGCAGCCATCAGAACTTACCTTCTGGAACGGTCTCGTGTTTGCCAAGTTTCTGATCCTGAGCGCAACTACCACTGCTTCTACCTTCTTTGTGCTGCACCACAAGAGGAAATTGAGAAATACAAATTGGGAAATCCTAAATCATTTCACTATCTTAACCAGTCACGTTGCTATGAGCTAGTCGGGGTAAGTGATGCCCATGACTATCTTGCCACAAGGAGAGCTATGGATATTGTTGGAATAAGTGCAAAGGAGCAGGAAGCAATTTTTAGAGTAGTTGCCGCAATTCTTCATCTTGGAAATGTTGTATTTGCTAAGGGAAAGGAAGTTGATTCATCCATTCCAAAAGATGATCAAGCCAAATTCCATCTCAAGATGGTCGCAGAGCTTCTCATGTGTGATGCTGCTGCATTAGAAGATGCATTGTGTAAGCGTGTCATGATAACGCCTGAAGAAGTTATCAAGAGAAGTCTTGATCCTCAAAGTGCAGCAATTAGCCGTGATGGTTTAGCAAAGACAATATATTCTCGACTGTTTGACTGGTTGGTGGACAAAATTAATGTTTCAATTGGACAGGATGCTAACTCAAAATCTTTGATTGGGGTTCTTGACATCTACGGTTTTGAAAGTTTTAAGCACAACAGTTTCGAGCAGTTCTGTATCAACTTCACAAATGAGAAATTGCAGCAACATTTCAATCAGCACGTTTTCAAAATGGAACAAGAAGAGTACACAAAAGAGGAGATTGATTGGAGCTACATTGAATTTGTCGATAATCAAGATGTCTTGGATCTTATTGAAAAGAAACCTGGAGGAATAGTTGCTCTCCTCGATGAAGCTTGCATGTTTCCAAAGTCAACCCATGAAACATTTGCAAATAAGCTATATCAGACATTTAAAGCTCATAAGCGCTTCATAAAGCCGAAACTTTCTCGAACAGATTTTACCATCGCCCATTATGCTGGAGAGGTGCTCTATCAGTCTGACCAATTTTTGGACAAAAACAAGGACTATGTGGTTCCTGAACATCAAGACTTGTTGGGTGTTTCCAAATGTACTTTTGTGGCAGGTCTTTTCCCTCCACTTCGAGAAGAGACAGCTAAATCTACCAAGTTTTCTTCAATTGGCTCTCGTTTTAAGCTACAACTACAAAGCCTAATGGAAACTTTAAACTCTACGGAGCCTCACTATATCAGATGTGTAAAACCAAACAACCTTCTAAAACCGGCTGTATTTGAGAACGTAAACATTATGCAGCAACTGCGCTGTGGTGGTGTTTTAGAAGCAATTCGAATTAGCTGTGCTGGTTACCCTACTCGAAAACCTTTCTTTGAATTCACCAACCGATTTGGACTTCTTGCCCCAGAGGTCTTGGATGCAAACGTTGATGAAAAAGTTGCGTGCAAAAAAATTCTGGAAAAGAAGGGTCTTCAAGGGTTTCAGATAGGTAAAACAAAGGTATTCTTAAGAGCTGGTCAGATGGCTGAGTTAGATGCACGAAGAACCGAAGTACTTAGTGGTGCAGCAAAAACTATCCAGCGACGTGTACGAACTCATTATGCGCGGAAACGGTTTATTGCATTGCGTGAGGCAACCATAGTTATGCAATCAATATGTAGAGGAAGACTCTCTTGCAAACGCTTCGATGGCATGAAAAGAGAGGCAGCTGCTAAGAAGATTCAGAAGCACATACGTAGATATCGCGCCAGAACAAATTATAAAAAACTCCATCTCTCAGGGCTTGTCTTGCAAACAGGTTTAAGAGCAATGGCTGCTCGTAATCAATTCAGATTTAGGAAGCAAGCTAAAGCAGCAACCATTCTTCAGGCTGTGTGGAGATGCCATAAAGCTGCCTCATACTTTAAGAGGCTCAAGAGGGGTTCAGTGGTCGCACAGTGCCGAATGAGGTCAAAAATTGCAAGGAAGGAACTTAGGAAGCTCAAAATGGAAGCAAGGGAAACAGGTGCTCTTAAAGAAGCAAAAGACAAGTTAACAAAACAAGTGGAGGAACTAACTTGGCGTCTACAGTTGGAAAAACGTTTAAGGACTGACCTAGAAGAAGCAAAAGCACAAGAGATAACTAAATTGCAGAACTCATTGCAAGAAATGCAGAATAAAGTTGAAGAAGCAAATGCAAAAATTGTCAAGGAACGGGAGGAGGCTGCAAAGAAAGCTATTGAAGAGGCAACTCCTGTTGTACAAGAAACCCAAGTTGTCGTTGAGGACACCAAAAAAATTGATTCTCTAACAGCAGAAGTGGAGAGTTTAAAGGCTTCGTTGGATTCAGAGAAACAAAGAGCTGATGATTGTGAAAGAAAATACAATGAAGCTCAAACATCTGGTGAAGAACGACGTAAGAAATTAGAAGAAACTGAGAAAAAAGTTAGTCAGCTCCAGGAAAATATGACCAGGCTAGAGGAGAAGCTTACCAATTTAGAATCAGAAAATCAAGTATTGCGCCAACAAGCCGTGTCCATGGCACCAAATAAGTTCCTTTCTGGACGGTCCAGATCAATTATTCAGAGGGCAGCTGAAAGTGGTATTCCGACTGATGCAAAGGCAGCTATGGATCTGCATAGTGCTTCGATAAACCACAGGGAGTCTGAATTGGAGGATAAGCCACAGAAATCACTAAATGAAAAACAGCAGGAGAATCAAGAGCTGCTGATTCGATGCATTGCACAACACCTAGGCTTTGCAGGGAACAGGCCTATTGCTGCCTGCATCATATATAAATGCCTTTTGCAGTGGAGATCATTTGAAGTTGAGCGGACAAGCATTTTTGATAGGATTATTCAGACCATAGGCAATGCCATTGAGACCCAGGATAACAATGATATCTTGGCCTATTGGTTATCCAATGCCTCAACACTTCTATTACTACTCCAGCGTACACTGAAAGCAAGTGGTGCTGCAGGAATGGCACCGCAACGACGTCGATCATCATCAGCTACTTTATTTGGAAGGATGACACAAAGTTTCCGTGGAAGCCCACAAGGTGTCAATCTTTCCTTAATCAACGGTGGATCGAGTGGTGGAGTGGACACTTTACGGCAAGTTGAAGCCAAGTACCCAGCTTTGCTTTTTAAACAGCAACTCACAGCATATGTAGAAAAGATTTATGGGATGATTCGAGATAATTTGAAGAAAGAAATTTCACCGTTGCTTGGATTGTGCATCCAGGCACCAAGAACATCAAGGGCGAGCTTGGTTAAAGGAGCCCGATCAGTTGCAAATACCGAGGCCCAGAGAGCTTTGATTGCTCACTGGCAAGGGATTGTTAAGAGTCTCGGAAACTTCTTAAATACGTTAAAAGCAAATCATGTACCTCCTTTTTTAGTCCGCAAGGTGTTCACACAGATATTCTCCTTCATCAATGTTCAGTTATTCAACAGCCTTCTATTACGACGAGAGTGCTGTTCGTTTAGTAATGGGGAGTATGTAAAAGCTGGTTTGGCTGAGTTGGAGCATTGGTGCTATAAAGCAACAGATGAGTATGCAGGTTCAGCTTGGGATGAACTCAAGCATATTAGGCAAGCCATTGGATTCCTGGTAATACATCAAAAACCCAAAAAGACACTTGATGAAATAAGCCATGACCTGTGCCCAGTCCTCAGTATACAGCAGCTATATCGTATCAGTACAATGTACTGGGATGACAAATATGGCACACATAGCGTGTCCTCGGATGTTATATCCAATATGAGAGTGTTGATGACAGAAGATTCTAACAATGCTGTCAGTAATTCTTTCCTCTTGGATGACGATTCCAGCATTCCATTTTCAGTTGATGACTTATCAAAGTCGATGGAACAAATAGACATTTCCGACATTGAACCACCGCCACTTATTCGTGAAAACTCAGGCTTTAGTTTCTTGTTGCCGCGTGCAGATTGA

Protein Analysis

1528

Amino Acids

173.12

Weight (kDa)

9.01

Isoelectric Point (pI)

44.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Myosin_N PF02736 11 - 51 2.9e-09 Myosin N-terminal SH3-like domain
Myosin_head PF00063 64 - 720 1.8e-254 Myosin head (motor domain)
DIL PF01843 1346 - 1450 1.4e-30 DIL domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2409
AatII GACGTC 1 cut(s) 3628
Acc36I ACCTGC 3 cut(s) 470, 1748, 4181
Acc65I GGTACC 1 cut(s) 513
AccB1I GGYRCC 4 cut(s) 513, 3169, 3613, 3874
AccB7I CCANNNNNTGG 1 cut(s) 1684
AccBSI CCGCTC 1 cut(s) 3460
AccI GTMKAC 3 cut(s) 281, 2713, 4309
AccII CGCG 3 cut(s) 2254, 2394, 4576
AclI AACGTT 2 cut(s) 2073, 2728
AclWI GGATC 6 cut(s) 103, 740, 1160, 1488, 3267, 3724
AcoI YGGCCR 1 cut(s) 532
AcsI RAATTY 6 cut(s) 241, 1052, 1454, 2024, 2100, 3843
AcuI CTGAAG 2 cut(s) 1161, 2498
AcyI GRCGYC 2 cut(s) 2710, 3625
AdeI CACNNNGTG 1 cut(s) 3689
AfeI AGCGCT 1 cut(s) 1601
AfiI CCNNNNNNNGG 5 cut(s) 58, 185, 552, 1684, 3857
AflII CTTAAG 1 cut(s) 2155
AflIII ACRYGT 1 cut(s) 2233
AjiI CACGTC 1 cut(s) 2234
AjnI CCWGG 8 cut(s) 111, 226, 1498, 3084, 3098, 3513, 3870, 4239
AjuI GAANNNNNNNTTGG 2 cut(s) 800, 832
Alw21I GWGCWC 4 cut(s) 32, 370, 1665, 2659
Alw26I GTCTC 5 cut(s) 485, 729, 1778, 3503, 3983
AlwI GGATC 6 cut(s) 103, 740, 1160, 1488, 3267, 3724
AlwNI CAGNNNCTG 2 cut(s) 407, 1951
Aor51HI AGCGCT 1 cut(s) 1601
AoxI GGCC 4 cut(s) 532, 3398, 3534, 3933
ApoI RAATTY 6 cut(s) 241, 1052, 1454, 2024, 2100, 3843
AseI ATTAAT 4 cut(s) 90, 306, 432, 1248
Asp700I GAANNNNTTC 1 cut(s) 1977
Asp718I GGTACC 1 cut(s) 513
AspA2I CCTAGG 1 cut(s) 3379
AspLEI GCGC 6 cut(s) 756, 1602, 1956, 2254, 2396, 3150
AspS9I GGNCC 2 cut(s) 3195, 3934
AsuC2I CCSGG 1 cut(s) 536
AsuHPI GGTGA 4 cut(s) 479, 2020, 3044, 3840
AsuII TTCGAA 1 cut(s) 1981
AvaII GGWCC 1 cut(s) 3195
AvrII CCTAGG 1 cut(s) 3379
BaeGI GKGCMC 1 cut(s) 4298
BanI GGYRCC 4 cut(s) 513, 3169, 3613, 3874
BanII GRGCYC 1 cut(s) 3913
BauI CACGAG 1 cut(s) 726
BbsI GAAGAC 3 cut(s) 54, 2111, 2320
Bbv12I GWGCWC 4 cut(s) 32, 370, 1665, 2659
BceAI ACGGC 3 cut(s) 1173, 3143, 3758
BcgI CGANNNNNNTGC 8 cut(s) 2314, 2348, 3608, 3642, 4086, 4120, 4304, 4338
BciT130I CCWGG 8 cut(s) 113, 228, 1500, 3086, 3100, 3515, 3872, 4241
BclI TGATCA 1 cut(s) 1042
BcnI CCSGG 1 cut(s) 536
BcoDI GTCTC 5 cut(s) 485, 729, 1778, 3503, 3983
BfaI CTAG 6 cut(s) 252, 636, 869, 2744, 3104, 3380
BfmI CTRYAG 2 cut(s) 2714, 3603
BfoI RGCGCY 1 cut(s) 1603
BfrI CTTAAG 1 cut(s) 2155
BfuAI ACCTGC 3 cut(s) 470, 1748, 4181
BlnI CCTAGG 1 cut(s) 3379
BmcAI AGTACT 1 cut(s) 2202
Bme1390I CCNGG 9 cut(s) 113, 228, 536, 1500, 3086, 3100, 3515, 3872, 4241
Bme18I GGWCC 1 cut(s) 3195
BmgBI CACGTC 1 cut(s) 2234
BmgT120I GGNCC 2 cut(s) 3195, 3934
BmiI GGNNCC 7 cut(s) 515, 1710, 1872, 3171, 3615, 3876, 3910
BmrFI CCNGG 9 cut(s) 113, 228, 536, 1500, 3086, 3100, 3515, 3872, 4241
BmrI ACTGGG 2 cut(s) 4292, 4351
BmuI ACTGGG 2 cut(s) 4292, 4351
BpiI GAAGAC 3 cut(s) 54, 2111, 2320
BplI GAGNNNNNCTC 4 cut(s) 1647, 1679, 2301, 2333
BpmI CTGGAG 6 cut(s) 249, 711, 1521, 1674, 3068, 3560
Bpu10I CCTNAGC 2 cut(s) 750, 1005
Bpu14I TTCGAA 1 cut(s) 1981
BpuEI CTTGAG 3 cut(s) 1046, 2546, 4196
BpuMI CCSGG 1 cut(s) 536
BsaAI YACGTR 2 cut(s) 279, 2384
BsaBI GATNNNNATC 1 cut(s) 3634
BsaHI GRCGYC 2 cut(s) 2710, 3625
BsaI GGTCTC 3 cut(s) 485, 729, 3503
BsaJI CCNNGG 7 cut(s) 112, 3165, 3379, 3513, 3673, 3930, 4374
BsaXI ACNNNNNCTCC 4 cut(s) 1494, 1524, 4148, 4178
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 185, 552, 1684, 3857
Bse118I RCCGGY 1 cut(s) 1915
Bse1I ACTGG 8 cut(s) 289, 587, 664, 850, 1235, 3962, 4298, 4346
Bse3DI GCAATG 8 cut(s) 127, 432, 613, 2270, 2463, 2786, 3366, 3505
Bse8I GATNNNNATC 1 cut(s) 3634
BseBI CCWGG 8 cut(s) 113, 228, 1500, 3086, 3100, 3515, 3872, 4241
BseDI CCNNGG 7 cut(s) 112, 3165, 3379, 3513, 3673, 3930, 4374
BseJI GATNNNNATC 1 cut(s) 3634
BseLI CCNNNNNNNGG 5 cut(s) 58, 185, 552, 1684, 3857
BseMI GCAATG 8 cut(s) 127, 432, 613, 2270, 2463, 2786, 3366, 3505
BseMII CTCAG 8 cut(s) 480, 741, 2166, 2439, 3054, 4140, 4318, 4566
BseNI ACTGG 8 cut(s) 289, 587, 664, 850, 1235, 3962, 4298, 4346
BseRI GAGGAG 4 cut(s) 1445, 1508, 2861, 3122
BseSI GKGCMC 1 cut(s) 4298
BseYI CCCAGC 1 cut(s) 3763
BsgI GTGCAG 3 cut(s) 771, 1197, 2232
Bsh1236I CGCG 3 cut(s) 2254, 2394, 4576
BshFI GGCC 4 cut(s) 534, 3400, 3536, 3935
BshNI GGYRCC 4 cut(s) 513, 3169, 3613, 3874
BsiHKAI GWGCWC 4 cut(s) 32, 370, 1665, 2659
BsiSI CCGG 2 cut(s) 535, 1916
BslI CCNNNNNNNGG 5 cut(s) 58, 185, 552, 1684, 3857
BsmAI GTCTC 5 cut(s) 485, 729, 1778, 3503, 3983
BsmI GAATGC 1 cut(s) 4464
BsnI GGCC 4 cut(s) 534, 3400, 3536, 3935
Bso31I GGTCTC 3 cut(s) 485, 729, 3503
Bsp119I TTCGAA 1 cut(s) 1981
Bsp1286I GDGCHC 6 cut(s) 32, 370, 1665, 2659, 3913, 4298
Bsp1407I TGTACA 1 cut(s) 2887
Bsp19I CCATGG 1 cut(s) 3165
BspANI GGCC 4 cut(s) 534, 3400, 3536, 3935
BspCNI CTCAG 8 cut(s) 481, 742, 2167, 2438, 3055, 4141, 4317, 4565
BspFNI CGCG 3 cut(s) 2254, 2394, 4576
BspHI TCATGA 1 cut(s) 1128
BspLI GGNNCC 7 cut(s) 515, 1710, 1872, 3171, 3615, 3876, 3910
BspMAI CTGCAG 1 cut(s) 3607
BspMI ACCTGC 3 cut(s) 470, 1748, 4181
BspPI GGATC 6 cut(s) 103, 740, 1160, 1488, 3267, 3724
BspT104I TTCGAA 1 cut(s) 1981
BspT107I GGYRCC 4 cut(s) 513, 3169, 3613, 3874
BspTI CTTAAG 1 cut(s) 2155
BspTNI GGTCTC 3 cut(s) 485, 729, 3503
BsrBI CCGCTC 1 cut(s) 3460
BsrDI GCAATG 8 cut(s) 127, 432, 613, 2270, 2463, 2786, 3366, 3505
BsrFI RCCGGY 1 cut(s) 1915
BsrGI TGTACA 1 cut(s) 2887
BsrI ACTGG 8 cut(s) 289, 587, 664, 850, 1235, 3962, 4298, 4346
BssAI RCCGGY 1 cut(s) 1915
BssECI CCNNGG 7 cut(s) 112, 3165, 3379, 3513, 3673, 3930, 4374
BssNAI GTATAC 2 cut(s) 282, 4310
BssNI GRCGYC 2 cut(s) 2710, 3625
BssSI CACGAG 1 cut(s) 726
BssT1I CCWWGG 2 cut(s) 3165, 3379
Bst1107I GTATAC 2 cut(s) 282, 4310
Bst2BI CACGAG 1 cut(s) 726
Bst2UI CCWGG 8 cut(s) 113, 228, 1500, 3086, 3100, 3515, 3872, 4241
Bst6I CTCTTC 3 cut(s) 1410, 1776, 2865
BstACI GRCGYC 2 cut(s) 2710, 3625
BstAFI CTTAAG 1 cut(s) 2155
BstAPI GCANNNNNTGC 4 cut(s) 1951, 2462, 2797, 3599
BstAUI TGTACA 1 cut(s) 2887
BstBAI YACGTR 2 cut(s) 279, 2384
BstBI TTCGAA 1 cut(s) 1981
BstC8I GCNNGC 8 cut(s) 184, 1531, 2092, 2493, 3412, 3895, 4227, 4578
BstDSI CCRYGG 2 cut(s) 3165, 3673
BstEII GGTNACC 1 cut(s) 1997
BstFNI CGCG 3 cut(s) 2254, 2394, 4576
BstH2I RGCGCY 1 cut(s) 1603
BstHHI GCGC 6 cut(s) 756, 1602, 1956, 2254, 2396, 3150
BstMAI GTCTC 5 cut(s) 485, 729, 1778, 3503, 3983
BstNI CCWGG 8 cut(s) 113, 228, 1500, 3086, 3100, 3515, 3872, 4241
BstNSI RCATGY 2 cut(s) 15, 1537
BstPI GGTNACC 1 cut(s) 1997
BstSCI CCNGG 9 cut(s) 111, 226, 534, 1498, 3084, 3098, 3513, 3870, 4239
BstSFI CTRYAG 2 cut(s) 2714, 3603
BstSLI GKGCMC 1 cut(s) 4298
BstSNI TACGTA 2 cut(s) 279, 2384
BstUI CGCG 3 cut(s) 2254, 2394, 4576
BstV2I GAAGAC 3 cut(s) 54, 2111, 2320
BstX2I RGATCY 3 cut(s) 108, 1480, 3259
BstXI CCANNNNNNTGG 1 cut(s) 1652
BstYI RGATCY 3 cut(s) 108, 1480, 3259
BstZ17I GTATAC 2 cut(s) 282, 4310
BsuRI GGCC 4 cut(s) 534, 3400, 3536, 3935
BtgI CCRYGG 2 cut(s) 3165, 3673
BtgZI GCGATG 1 cut(s) 1624
BtrI CACGTC 1 cut(s) 2234
BtsI GCAGTG 2 cut(s) 763, 3443
BtsIMutI CAGTG 7 cut(s) 469, 763, 2580, 2591, 3443, 3584, 3955
BveI ACCTGC 3 cut(s) 470, 1748, 4181
Cac8I GCNNGC 8 cut(s) 184, 1531, 2092, 2493, 3412, 3895, 4227, 4578
CaiI CAGNNNCTG 2 cut(s) 407, 1951
CciI TCATGA 1 cut(s) 1128
CfoI GCGC 6 cut(s) 756, 1602, 1956, 2254, 2396, 3150
Cfr10I RCCGGY 1 cut(s) 1915
Cfr13I GGNCC 2 cut(s) 3195, 3934
CseI GACGC 1 cut(s) 2699
CspCI CAANNNNNGTGG 2 cut(s) 2673, 2708
DraI TTTAAA 4 cut(s) 1588, 1860, 2958, 3778
DraIII CACNNNGTG 1 cut(s) 3689
EaeI YGGCCR 1 cut(s) 532
Eam1104I CTCTTC 3 cut(s) 1410, 1776, 2865
EarI CTCTTC 3 cut(s) 1410, 1776, 2865
EciI GGCGGA 2 cut(s) 201, 568
Eco105I TACGTA 2 cut(s) 279, 2384
Eco130I CCWWGG 2 cut(s) 3165, 3379
Eco147I AGGCCT 1 cut(s) 3400
Eco24I GRGCYC 1 cut(s) 3913
Eco31I GGTCTC 3 cut(s) 485, 729, 3503
Eco32I GATATC 2 cut(s) 2390, 3529
Eco47I GGWCC 1 cut(s) 3195
Eco47III AGCGCT 1 cut(s) 1601
Eco57I CTGAAG 2 cut(s) 1161, 2498
Eco91I GGTNACC 1 cut(s) 1997
EcoO65I GGTNACC 1 cut(s) 1997
EcoRI GAATTC 1 cut(s) 2024
EcoRII CCWGG 8 cut(s) 111, 226, 1498, 3084, 3098, 3513, 3870, 4239
EcoRV GATATC 2 cut(s) 2390, 3529
EcoT14I CCWWGG 2 cut(s) 3165, 3379
EcoT22I ATGCAT 2 cut(s) 1114, 3368
EcoT38I GRGCYC 1 cut(s) 3913
ErhI CCWWGG 2 cut(s) 3165, 3379
FalI AAGNNNNNCTT 4 cut(s) 2138, 2170, 2305, 2337
FauNDI CATATG 1 cut(s) 3796
FbaI TGATCA 1 cut(s) 1042
FblI GTMKAC 3 cut(s) 281, 2713, 4309
FriOI GRGCYC 1 cut(s) 3913
FspBI CTAG 6 cut(s) 252, 636, 869, 2744, 3104, 3380
GlaI GCGC 6 cut(s) 755, 1601, 1955, 2253, 2395, 3149
GsaI CCCAGC 1 cut(s) 3767
GsuI CTGGAG 6 cut(s) 249, 711, 1521, 1674, 3068, 3560
HaeII RGCGCY 1 cut(s) 1603
HaeIII GGCC 4 cut(s) 534, 3400, 3536, 3935
HapII CCGG 2 cut(s) 535, 1916
HgaI GACGC 1 cut(s) 2699
HhaI GCGC 6 cut(s) 756, 1602, 1956, 2254, 2396, 3150
Hin1I GRCGYC 2 cut(s) 2710, 3625
Hin6I GCGC 6 cut(s) 754, 1600, 1954, 2252, 2394, 3148
HinP1I GCGC 6 cut(s) 754, 1600, 1954, 2252, 2394, 3148
HincII GTYRAC 2 cut(s) 1548, 2682
HindII GTYRAC 2 cut(s) 1548, 2682
HindIII AAGCTT 2 cut(s) 1527, 3113
HpaI GTTAAC 1 cut(s) 2682
HpaII CCGG 2 cut(s) 535, 1916
HphI GGTGA 4 cut(s) 479, 2020, 3044, 3840
Hpy99I CGWCG 5 cut(s) 2235, 3045, 3627, 3630, 4101
HpyAV CCTTC 9 cut(s) 542, 722, 785, 1916, 2107, 2608, 3648, 4069, 4097
Hsp92I GRCGYC 2 cut(s) 2710, 3625
HspAI GCGC 6 cut(s) 754, 1600, 1954, 2252, 2394, 3148
KpnI GGTACC 1 cut(s) 517
Ksp22I TGATCA 1 cut(s) 1042
KspAI GTTAAC 1 cut(s) 2682
MaeI CTAG 6 cut(s) 252, 636, 869, 2744, 3104, 3380
MaeIII GTNAC 4 cut(s) 79, 341, 852, 1997
MbiI CCGCTC 1 cut(s) 3460
MfeI CAATTG 2 cut(s) 1257, 1812
MflI RGATCY 3 cut(s) 108, 1480, 3259
MhlI GDGCHC 6 cut(s) 32, 370, 1665, 2659, 3913, 4298
MlyI GAGTC 3 cut(s) 2310, 3299, 3985
MmeI TCCRAC 6 cut(s) 907, 2700, 2949, 3260, 4134, 4542
Mph1103I ATGCAT 2 cut(s) 1114, 3368
MroXI GAANNNNTTC 1 cut(s) 1977
MslI CAYNNNNRTG 3 cut(s) 333, 500, 2291
MspA1I CMGCKG 2 cut(s) 2357, 3221
MspCI CTTAAG 1 cut(s) 2155
MspI CCGG 2 cut(s) 535, 1916
MspR9I CCNGG 9 cut(s) 113, 228, 536, 1500, 3086, 3100, 3515, 3872, 4241
MunI CAATTG 2 cut(s) 1257, 1812
Mva1269I GAATGC 1 cut(s) 4464
MvaI CCWGG 8 cut(s) 113, 228, 1500, 3086, 3100, 3515, 3872, 4241
MvnI CGCG 3 cut(s) 2254, 2394, 4576
NciI CCSGG 1 cut(s) 536
NcoI CCATGG 1 cut(s) 3165
NdeI CATATG 1 cut(s) 3796
NlaIV GGNNCC 7 cut(s) 515, 1710, 1872, 3171, 3615, 3876, 3910
NmuCI GTSAC 3 cut(s) 79, 341, 852
NsiI ATGCAT 2 cut(s) 1114, 3368
NspI RCATGY 2 cut(s) 15, 1537
NspV TTCGAA 1 cut(s) 1981
PagI TCATGA 1 cut(s) 1128
PceI AGGCCT 1 cut(s) 3400
PctI GAATGC 1 cut(s) 4464
PdmI GAANNNNTTC 1 cut(s) 1977
PflMI CCANNNNNTGG 1 cut(s) 1684
PfoI TCCNGGA 1 cut(s) 3084
PleI GAGTC 3 cut(s) 2310, 3298, 3984
PpsI GAGTC 3 cut(s) 2310, 3298, 3984
Ppu21I YACGTR 2 cut(s) 279, 2384
PshBI ATTAAT 4 cut(s) 90, 306, 432, 1248
PsiI TTATAA 1 cut(s) 2409
Psp1406I AACGTT 2 cut(s) 2073, 2728
Psp6I CCWGG 8 cut(s) 111, 226, 1498, 3084, 3098, 3513, 3870, 4239
PspEI GGTNACC 1 cut(s) 1997
PspFI CCCAGC 1 cut(s) 3763
PspGI CCWGG 8 cut(s) 111, 226, 1498, 3084, 3098, 3513, 3870, 4239
PspN4I GGNNCC 7 cut(s) 515, 1710, 1872, 3171, 3615, 3876, 3910
PspPI GGNCC 2 cut(s) 3195, 3934
PsrI GAACNNNNNNTAC 2 cut(s) 1618, 1650
PstI CTGCAG 1 cut(s) 3607
PstNI CAGNNNCTG 2 cut(s) 407, 1951
PsuI RGATCY 3 cut(s) 108, 1480, 3259
PvuII CAGCTG 2 cut(s) 2357, 3221
RseI CAYNNNNRTG 3 cut(s) 333, 500, 2291
Sau96I GGNCC 2 cut(s) 3195, 3934
ScaI AGTACT 1 cut(s) 2202
SchI GAGTC 3 cut(s) 2310, 3299, 3985
ScrFI CCNGG 9 cut(s) 113, 228, 536, 1500, 3086, 3100, 3515, 3872, 4241
SduI GDGCHC 6 cut(s) 32, 370, 1665, 2659, 3913, 4298
SfcI CTRYAG 2 cut(s) 2714, 3603
SfuI TTCGAA 1 cut(s) 1981
SinI GGWCC 1 cut(s) 3195
SmiMI CAYNNNNRTG 3 cut(s) 333, 500, 2291
SmlI CTYRAG 4 cut(s) 1061, 2155, 2561, 4211
SmoI CTYRAG 4 cut(s) 1061, 2155, 2561, 4211
SnaBI TACGTA 2 cut(s) 279, 2384
SseBI AGGCCT 1 cut(s) 3400
SspMI CTAG 6 cut(s) 252, 636, 869, 2744, 3104, 3380
StuI AGGCCT 1 cut(s) 3400
StyD4I CCNGG 9 cut(s) 111, 226, 534, 1498, 3084, 3098, 3513, 3870, 4239
StyI CCWWGG 2 cut(s) 3165, 3379
TatI WGTACW 6 cut(s) 1419, 1745, 2200, 2887, 4331, 4338
TauI GCSGC 2 cut(s) 974, 4576
TscAI CASTG 7 cut(s) 469, 770, 2580, 2591, 3443, 3591, 3962
TseFI GTSAC 3 cut(s) 79, 341, 852
Tsp45I GTSAC 3 cut(s) 79, 341, 852
TspGWI ACGGA 3 cut(s) 83, 1883, 3662
TspRI CASTG 7 cut(s) 469, 770, 2580, 2591, 3443, 3591, 3962
Van91I CCANNNNNTGG 1 cut(s) 1684
Vha464I CTTAAG 1 cut(s) 2155
VpaK11BI GGWCC 1 cut(s) 3195
VspI ATTAAT 4 cut(s) 90, 306, 432, 1248
XapI RAATTY 6 cut(s) 241, 1052, 1454, 2024, 2100, 3843
XceI RCATGY 2 cut(s) 15, 1537
XcmI CCANNNNNNNNNTGG 3 cut(s) 60, 119, 4237
XmaJI CCTAGG 1 cut(s) 3379
XmiI GTMKAC 3 cut(s) 281, 2713, 4309
XmnI GAANNNNTTC 1 cut(s) 1977
XspI CTAG 6 cut(s) 252, 636, 869, 2744, 3104, 3380
ZraI GACGTC 1 cut(s) 3626
ZrmI AGTACT 1 cut(s) 2202
Zsp2I ATGCAT 2 cut(s) 1114, 3368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.