Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010184.1

Orthogroup ID

OG0005571

Physical Location & Seq

Genomic Coordinates Reverse (-)

3473 .. 13473

Gene Structure 10001 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010184.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3990 bp

atggaagctcctgctggcggagttgatgacatgacaaagctatcttatctgcatgagcctggagttttggagaatttgaaaactagatacgaacttaatgaaatctatacgtatactggaaatatccttattgccattaatccattccaaagactgccccatatctatgatagtcacatgatgcaacaatacaagggagcaccatttggagagctaagtcctcatgtttttgcagttgctgacgttgcatacagggcaatgattaatgagggaaaaagcaattcaattctggtcagtggtgaaagtggagcaggtaaaactgagaccacaaaaatgctcatgcgtcggtttggtaagtttgttgaaatccagtttgataagcaaggaagaatctctggagcagccatcagaacttaccttctggaacggtctcgtgtttgccaagtttctgatcctgagcgcaactaccactgcttctaccttctttgtgctgcaccacaagaggaaattgagaaatacaaattgggaaatcctaaatcatttcactatcttaaccagtcacgttgctatgagctagtcggggtaagtgatgcccatgactatcttgccacaaggagagctatggatattgttggaataagtgcaaaggagcaggaagcaatttttagagtagttgccgcaattcttcatcttggaaatgttgtatttgctaagggaaaggaagttgattcatccattccaaaagatgatcaagccaaattccatctcaagatggtcgcagagcttctcatgtgtgatgctgctgcattagaagatgcattgtgtaagcgtgtcatgataacgcctgaagaagttatcaagagaagtcttgatcctcaaagtgcagcaattagccgtgatggtttagcaaagacaatatattctcgactgtttgactggttggtggacaaaattaatgtttcaattggacaggatgctaactcaaaatctttgattggggttcttgacatctacggttttgaaagttttaagcacaacagtttcgagcagttctgtatcaacttcacaaatgagaaattgcagcaacatttcaatcagcacgttttcaaaatggaacaagaagagtacacaaaagaggagattgattggagctacattgaatttgtcgataatcaagatgtcttggatcttattgaaaagaaacctggaggaatagttgctctcctcgatgaagcttgcatgtttccaaagtcaacccatgaaacatttgcaaataagctatatcagacatttaaagctcataagcgcttcataaagccgaaactttctcgaacagattttaccatcgcccattatgctggagaggtgctctatcagtctgaccaatttttggacaaaaacaaggactatgtggttcctgaacatcaagacttgttgggtgtttccaaatgtacttttgtggcaggtcttttccctccacttcgagaagagacagctaaatctaccaagttttcttcaattggctctcgttttaagggtgttttagaagcaattcgaattagctgtgctggttaccctactcgaaaacctttctttgaattcaccaaccgatttggacttcttgccccagaggtcttggatgcaaacgttgatgaaaaagttgcgtgcaaaaaaattctggaaaagaagggtcttcaagggtttcagataggtaaaacaaaggtattcttaagagctggtcagatggctgagttagatgcacgaagaaccgaagtacttagtggtgcagcaaaaactatccagcgacgtgtacgaactcattatgcgcggaaacggtttattgcattgcgtgaggcaaccatagttatgcaatcaatatgtagaggaagactctcttgcaaacgcttcgatggcatgaaaagagaggcagctgctaagaagattcagaagcacatacgtagatatcgcgccagaacaaattataaaaaactccatctctcagggcttgtcttgcaaacaggtttaagagcaatggctgctcgtaatcaattcagatttaggaagcaagctaaagcagcaaccattcttcaggctgtgtggagatgccataaagctgcctcatactttaagaggctcaagaggggttcagtggtcgcacagtgccgaatgaggtcaaaaattgcaaggaaggaacttaggaagctcaaaatggaagcaagggaaacaggtgctcttaaagaagcaaaagacaagttaacaaaacaagtggaggaactaacttggcgtctacagttggaaaaacgtttaaggactgacctagaagaagcaaaagcacaagagataactaaattgcagaactcattgcaagaaatgcagaataaagttgaagaagcaaatgcaaaaattgtcaaggaacgggaggaggctgcaaagaaagctattgaagaggcaactcctgttgtacaagaaacccaagttgttgttgaggacaccaaaaaaattgattctctaacagcagaattggagagtttaaaggcttcgttggattcagagaaacaaagagctgatgattgtgaaagaaaatacaatgaagctcaaacatctggtgaagaacgacgtaagaaattagaagaaactgagaaaaaagttagtcagctccaggaaaatatgaccaggctagaggagaagcttaccaatttagaatcagaaaatcaagtattgcgccaacaagccgtgtccatggcaccaaataagttcctttctggacggtccagatcaattattcagagggcagctgaaagtggtattccgactgatgcaaaggcagctatggatctgcatagtgcttcgataaaccacagggagtctgaattggaggataagccacagaaatcactaaatgaaaaacagcaggagaatcaagagctgctgattcgatgcattgcacaacacctaggctttgcagggaacaggcctattgctgcctgcatcatatataaatgccttttgcagtggagatcatttgaagttgagcggacaagcatttttgataggattattcagaccataggcaatgccattgagacccaggataacaatgatatcttggcctattggttatccaatgcctcaacacttctattactactccagcgtacactgaaagcaagtggtgctgcaggaatggcaccgcaacgacgtcgatcatcatcagctactttatttggaaggatgacacaaagtttccgtggaagcccacaaggtgtcaatctttccttaatcaacggtggatcgagtggtggagtggacactttacggcaagttgaagccaagtacccagctttgctttttaaacagcaactcacagcatatgtagaaaagatttatgggatgattcgagataatttgaagaaagaaatttcaccgttgcttggattgtgcatccaggcaccaagaacatcaagggcgagcttggttaaaggagcccgatcagttgcaaataccgaggcccagagagctttgattgctcactggcaagggattgttaagagtctcggaaacttcttaaatacgttaaaagcaaatcattatgcaggttcagcttgggatgaactcaagcatattaggcaagccattggattcctggtaatgcatcaaaaacccaaaaagacacttgacgaaataagccatgacctgtgcccaggcctcagtatacagcagctatatcgtatcagtacaatgtactgggatgacaaatatggcacacatagcgtggcctcggatgttatatccaatatgagagtgttgatgacagaagattctaacaatgctgtcagtaattctttcctcttggatgacgattccagcattccattttcagttgatgacttatcaaagtcgatggaacaaatagacatttccgacattgaacccccgccacttattcgtgaaaactcaggctttagtttcttgttgccgcgtgcagattga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000146 GO:0000166 GO:0000331 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003774 GO:0003779 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005856 GO:0006928 GO:0006996 GO:0007010 GO:0007015 GO:0008092 GO:0008144 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0015629 GO:0016043 GO:0016049 GO:0016459 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022414 GO:0030029 GO:0030036 GO:0030048 GO:0030154 GO:0030554 GO:0030898 GO:0031410 GO:0031982 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0033275 GO:0035639 GO:0036094 GO:0040007 GO:0042623 GO:0042641 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043531 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044706 GO:0044877 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051015 GO:0051179 GO:0051234 GO:0051640 GO:0051641 GO:0051656 GO:0051704 GO:0060560 GO:0070252 GO:0071840 GO:0097159 GO:0097367 GO:0097435 GO:0097708 GO:0140027 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DIL IQ Myosin_N Myosin_head

Protein Analysis

1329

Amino Acids

150.64

Weight (kDa)

9.16

Isoelectric Point (pI)

45.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005571)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08730 AT1G08730 AT1G54560 AT1G54560
fragaria_vesca	FvH4_6g02450 FvH4_6g02450
malus_domestica	MD04G1227800.v1.1 MD12G1244600.v1.1
prunus_persica	Prupe.6G347100_v2.0.a1 Prupe.6G347100_v2.0.a1 Prupe.6G347100_v2.0.a1 Prupe.6G347100_v2.0.a1
pyrus_communis	pycom04g20130 pycom04g20140 pycom04g20150 pycom12g22440
rosa_chinensis	RchiOBHm_Chr3g0450241 RchiOBHm_Chr3g0450271
rosa_laevigata	RLG00000025743 RLG00000025747
rosa_multiflora	Rmu_sc0010184.1_g000002
rosa_roxburghii	Rroxscaffold_6G00427950
rosa_rugosa	Rorug02G0626300 Rorug02G0626400
rosa_samantha	Rh3AG025600 Rh3BG026300 Rh3CG025300
rosa_wichuraiana	Rw3G002080

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1983
AatII	GACGTC	1 cut(s)	3202
Acc36I	ACCTGC	3 cut(s)	302, 1454, 3584
AccB1I	GGYRCC	3 cut(s)	2743, 3187, 3448
AccB7I	CCANNNNNTGG	1 cut(s)	1390
AccBSI	CCGCTC	1 cut(s)	3034
AccI	GTMKAC	3 cut(s)	113, 2287, 3712
AccII	CGCG	3 cut(s)	1828, 1968, 3979
AciI	CCGC	7 cut(s)	18, 678, 1828, 3034, 3191, 3935, 3977
AclI	AACGTT	2 cut(s)	1647, 2302
AclWI	GGATC	5 cut(s)	446, 866, 1194, 2841, 3298
AcsI	RAATTY	6 cut(s)	73, 758, 1160, 1598, 1674, 3417
AcuI	CTGAAG	2 cut(s)	867, 2072
AcyI	GRCGYC	2 cut(s)	2284, 3199
AdeI	CACNNNGTG	1 cut(s)	3263
AfaI	GTAC	9 cut(s)	1127, 1453, 1776, 1812, 2463, 3157, 3335, 3736, 3743
AfeI	AGCGCT	1 cut(s)	1307
AfiI	CCNNNNNNNGG	3 cut(s)	17, 1390, 3431
AflII	CTTAAG	1 cut(s)	1729
AflIII	ACRYGT	1 cut(s)	1807
AjiI	CACGTC	1 cut(s)	1808
AjnI	CCWGG	8 cut(s)	58, 1204, 2658, 2672, 3087, 3444, 3642, 3700
AjuI	GAANNNNNNNTTGG	2 cut(s)	506, 538
Alw21I	GWGCWC	3 cut(s)	202, 1371, 2233
Alw26I	GTCTC	5 cut(s)	317, 435, 1484, 3077, 3557
AlwI	GGATC	5 cut(s)	446, 866, 1194, 2841, 3298
AlwNI	CAGNNNCTG	1 cut(s)	239
Aor51HI	AGCGCT	1 cut(s)	1307
AoxI	GGCC	5 cut(s)	2972, 3108, 3507, 3703, 3774
ApoI	RAATTY	6 cut(s)	73, 758, 1160, 1598, 1674, 3417
AseI	ATTAAT	3 cut(s)	138, 264, 954
Asp700I	GAANNNNTTC	1 cut(s)	1551
AspA2I	CCTAGG	1 cut(s)	2953
AspLEI	GCGC	5 cut(s)	462, 1308, 1828, 1970, 2724
AspS9I	GGNCC	2 cut(s)	2769, 3508
AsuHPI	GGTGA	4 cut(s)	311, 1594, 2618, 3414
AsuII	TTCGAA	1 cut(s)	1555
AvaII	GGWCC	1 cut(s)	2769
AvrII	CCTAGG	1 cut(s)	2953
BaeGI	GKGCMC	1 cut(s)	3701
BanI	GGYRCC	3 cut(s)	2743, 3187, 3448
BanII	GRGCYC	1 cut(s)	3487
BauI	CACGAG	1 cut(s)	432
BbsI	GAAGAC	2 cut(s)	1685, 1894
Bbv12I	GWGCWC	3 cut(s)	202, 1371, 2233
BccI	CCATC	9 cut(s)	413, 766, 771, 893, 1352, 1738, 1904, 2001, 3895
BceAI	ACGGC	3 cut(s)	879, 2717, 3332
BcgI	CGANNNNNNTGC	6 cut(s)	1888, 1922, 3182, 3216, 3707, 3741
BciT130I	CCWGG	8 cut(s)	60, 1206, 2660, 2674, 3089, 3446, 3644, 3702
BclI	TGATCA	1 cut(s)	748
BcoDI	GTCTC	5 cut(s)	317, 435, 1484, 3077, 3557
BfaI	CTAG	5 cut(s)	84, 575, 2318, 2678, 2954
BfmI	CTRYAG	2 cut(s)	2288, 3177
BfoI	RGCGCY	1 cut(s)	1309
BfrI	CTTAAG	1 cut(s)	1729
BfuAI	ACCTGC	3 cut(s)	302, 1454, 3584
BlnI	CCTAGG	1 cut(s)	2953
BmcAI	AGTACT	1 cut(s)	1776
Bme1390I	CCNGG	8 cut(s)	60, 1206, 2660, 2674, 3089, 3446, 3644, 3702
Bme18I	GGWCC	1 cut(s)	2769
BmgBI	CACGTC	1 cut(s)	1808
BmgT120I	GGNCC	2 cut(s)	2769, 3508
BmiI	GGNNCC	5 cut(s)	1416, 2745, 3189, 3450, 3484
BmrFI	CCNGG	8 cut(s)	60, 1206, 2660, 2674, 3089, 3446, 3644, 3702
BmrI	ACTGGG	1 cut(s)	3754
BmuI	ACTGGG	1 cut(s)	3754
BpiI	GAAGAC	2 cut(s)	1685, 1894
BplI	GAGNNNNNCTC	4 cut(s)	1353, 1385, 1875, 1907
BpmI	CTGGAG	6 cut(s)	81, 417, 1227, 1380, 2642, 3134
Bpu10I	CCTNAGC	2 cut(s)	456, 711
Bpu14I	TTCGAA	1 cut(s)	1555
BpuEI	CTTGAG	3 cut(s)	752, 2120, 3599
BsaAI	YACGTR	2 cut(s)	111, 1958
BsaBI	GATNNNNATC	1 cut(s)	3208
BsaHI	GRCGYC	2 cut(s)	2284, 3199
BsaI	GGTCTC	3 cut(s)	317, 435, 3077
BsaJI	CCNNGG	7 cut(s)	2739, 2953, 3087, 3247, 3504, 3700, 3777
BsaXI	ACNNNNNCTCC	2 cut(s)	1200, 1230
Bsc4I	CCNNNNNNNGG	3 cut(s)	17, 1390, 3431
Bse1I	ACTGG	6 cut(s)	121, 370, 556, 941, 3536, 3749
Bse3DI	GCAATG	6 cut(s)	264, 1844, 2037, 2360, 2940, 3079
Bse8I	GATNNNNATC	1 cut(s)	3208
BseBI	CCWGG	8 cut(s)	60, 1206, 2660, 2674, 3089, 3446, 3644, 3702
BseDI	CCNNGG	7 cut(s)	2739, 2953, 3087, 3247, 3504, 3700, 3777
BseJI	GATNNNNATC	1 cut(s)	3208
BseLI	CCNNNNNNNGG	3 cut(s)	17, 1390, 3431
BseMI	GCAATG	6 cut(s)	264, 1844, 2037, 2360, 2940, 3079
BseMII	CTCAG	7 cut(s)	312, 447, 1740, 2013, 2628, 3721, 3969
BseNI	ACTGG	6 cut(s)	121, 370, 556, 941, 3536, 3749
BseRI	GAGGAG	4 cut(s)	1151, 1214, 2435, 2696
BseSI	GKGCMC	1 cut(s)	3701
BseYI	CCCAGC	1 cut(s)	3337
BsgI	GTGCAG	3 cut(s)	477, 903, 1806
Bsh1236I	CGCG	3 cut(s)	1828, 1968, 3979
BshFI	GGCC	5 cut(s)	2974, 3110, 3509, 3705, 3776
BshNI	GGYRCC	3 cut(s)	2743, 3187, 3448
BsiHKAI	GWGCWC	3 cut(s)	202, 1371, 2233
BslI	CCNNNNNNNGG	3 cut(s)	17, 1390, 3431
BsmAI	GTCTC	5 cut(s)	317, 435, 1484, 3077, 3557
BsmI	GAATGC	1 cut(s)	3867
BsnI	GGCC	5 cut(s)	2974, 3110, 3509, 3705, 3776
Bso31I	GGTCTC	3 cut(s)	317, 435, 3077
Bsp119I	TTCGAA	1 cut(s)	1555
Bsp1286I	GDGCHC	5 cut(s)	202, 1371, 2233, 3487, 3701
Bsp1407I	TGTACA	1 cut(s)	2461
Bsp19I	CCATGG	1 cut(s)	2739
BspACI	CCGC	7 cut(s)	18, 678, 1828, 3034, 3191, 3935, 3977
BspANI	GGCC	5 cut(s)	2974, 3110, 3509, 3705, 3776
BspCNI	CTCAG	7 cut(s)	313, 448, 1741, 2012, 2629, 3720, 3968
BspFNI	CGCG	3 cut(s)	1828, 1968, 3979
BspHI	TCATGA	1 cut(s)	834
BspLI	GGNNCC	5 cut(s)	1416, 2745, 3189, 3450, 3484
BspMAI	CTGCAG	1 cut(s)	3181
BspMI	ACCTGC	3 cut(s)	302, 1454, 3584
BspPI	GGATC	5 cut(s)	446, 866, 1194, 2841, 3298
BspT104I	TTCGAA	1 cut(s)	1555
BspT107I	GGYRCC	3 cut(s)	2743, 3187, 3448
BspTI	CTTAAG	1 cut(s)	1729
BspTNI	GGTCTC	3 cut(s)	317, 435, 3077
BsrBI	CCGCTC	1 cut(s)	3034
BsrDI	GCAATG	6 cut(s)	264, 1844, 2037, 2360, 2940, 3079
BsrGI	TGTACA	1 cut(s)	2461
BsrI	ACTGG	6 cut(s)	121, 370, 556, 941, 3536, 3749
BssECI	CCNNGG	7 cut(s)	2739, 2953, 3087, 3247, 3504, 3700, 3777
BssNAI	GTATAC	2 cut(s)	114, 3713
BssNI	GRCGYC	2 cut(s)	2284, 3199
BssSI	CACGAG	1 cut(s)	432
BssT1I	CCWWGG	2 cut(s)	2739, 2953
Bst1107I	GTATAC	2 cut(s)	114, 3713
Bst2BI	CACGAG	1 cut(s)	432
Bst2UI	CCWGG	8 cut(s)	60, 1206, 2660, 2674, 3089, 3446, 3644, 3702
Bst6I	CTCTTC	3 cut(s)	1116, 1482, 2439
BstACI	GRCGYC	2 cut(s)	2284, 3199
BstAFI	CTTAAG	1 cut(s)	1729
BstAPI	GCANNNNNTGC	3 cut(s)	2036, 2371, 3173
BstAUI	TGTACA	1 cut(s)	2461
BstBAI	YACGTR	2 cut(s)	111, 1958
BstBI	TTCGAA	1 cut(s)	1555
BstC8I	GCNNGC	8 cut(s)	16, 1237, 1666, 2067, 2986, 3469, 3630, 3981
BstDSI	CCRYGG	2 cut(s)	2739, 3247
BstEII	GGTNACC	1 cut(s)	1571
BstFNI	CGCG	3 cut(s)	1828, 1968, 3979
BstH2I	RGCGCY	1 cut(s)	1309
BstHHI	GCGC	5 cut(s)	462, 1308, 1828, 1970, 2724
BstMAI	GTCTC	5 cut(s)	317, 435, 1484, 3077, 3557
BstNI	CCWGG	8 cut(s)	60, 1206, 2660, 2674, 3089, 3446, 3644, 3702
BstNSI	RCATGY	1 cut(s)	1243
BstPI	GGTNACC	1 cut(s)	1571
BstSCI	CCNGG	8 cut(s)	58, 1204, 2658, 2672, 3087, 3444, 3642, 3700
BstSFI	CTRYAG	2 cut(s)	2288, 3177
BstSLI	GKGCMC	1 cut(s)	3701
BstSNI	TACGTA	2 cut(s)	111, 1958
BstUI	CGCG	3 cut(s)	1828, 1968, 3979
BstV2I	GAAGAC	2 cut(s)	1685, 1894
BstX2I	RGATCY	2 cut(s)	1186, 2833
BstXI	CCANNNNNNTGG	1 cut(s)	1358
BstYI	RGATCY	2 cut(s)	1186, 2833
BstZ17I	GTATAC	2 cut(s)	114, 3713
BsuRI	GGCC	5 cut(s)	2974, 3110, 3509, 3705, 3776
BtgI	CCRYGG	2 cut(s)	2739, 3247
BtgZI	GCGATG	1 cut(s)	1330
BtrI	CACGTC	1 cut(s)	1808
BtsI	GCAGTG	2 cut(s)	469, 3017
BtsIMutI	CAGTG	7 cut(s)	301, 469, 2154, 2165, 3017, 3158, 3529
BveI	ACCTGC	3 cut(s)	302, 1454, 3584
Cac8I	GCNNGC	8 cut(s)	16, 1237, 1666, 2067, 2986, 3469, 3630, 3981
CaiI	CAGNNNCTG	1 cut(s)	239
CciI	TCATGA	1 cut(s)	834
CfoI	GCGC	5 cut(s)	462, 1308, 1828, 1970, 2724
Cfr13I	GGNCC	2 cut(s)	2769, 3508
CseI	GACGC	2 cut(s)	332, 2273
Csp6I	GTAC	9 cut(s)	1126, 1452, 1775, 1811, 2462, 3156, 3334, 3735, 3742
CspCI	CAANNNNNGTGG	2 cut(s)	2247, 2282
CviQI	GTAC	9 cut(s)	1126, 1452, 1775, 1811, 2462, 3156, 3334, 3735, 3742
DraI	TTTAAA	3 cut(s)	1294, 2532, 3352
DraIII	CACNNNGTG	1 cut(s)	3263
Eam1104I	CTCTTC	3 cut(s)	1116, 1482, 2439
EarI	CTCTTC	3 cut(s)	1116, 1482, 2439
EciI	GGCGGA	1 cut(s)	33
Eco105I	TACGTA	2 cut(s)	111, 1958
Eco130I	CCWWGG	2 cut(s)	2739, 2953
Eco147I	AGGCCT	2 cut(s)	2974, 3705
Eco24I	GRGCYC	1 cut(s)	3487
Eco31I	GGTCTC	3 cut(s)	317, 435, 3077
Eco32I	GATATC	2 cut(s)	1964, 3103
Eco47I	GGWCC	1 cut(s)	2769
Eco47III	AGCGCT	1 cut(s)	1307
Eco57I	CTGAAG	2 cut(s)	867, 2072
Eco91I	GGTNACC	1 cut(s)	1571
EcoO65I	GGTNACC	1 cut(s)	1571
EcoRI	GAATTC	1 cut(s)	1598
EcoRII	CCWGG	8 cut(s)	58, 1204, 2658, 2672, 3087, 3444, 3642, 3700
EcoRV	GATATC	2 cut(s)	1964, 3103
EcoT14I	CCWWGG	2 cut(s)	2739, 2953
EcoT22I	ATGCAT	3 cut(s)	820, 2942, 3654
EcoT38I	GRGCYC	1 cut(s)	3487
ErhI	CCWWGG	2 cut(s)	2739, 2953
FalI	AAGNNNNNCTT	4 cut(s)	1712, 1744, 1879, 1911
FauI	CCCGC	1 cut(s)	3942
FauNDI	CATATG	1 cut(s)	3370
FbaI	TGATCA	1 cut(s)	748
FblI	GTMKAC	3 cut(s)	113, 2287, 3712
FriOI	GRGCYC	1 cut(s)	3487
FspBI	CTAG	5 cut(s)	84, 575, 2318, 2678, 2954
GlaI	GCGC	5 cut(s)	461, 1307, 1827, 1969, 2723
GsaI	CCCAGC	1 cut(s)	3341
GsuI	CTGGAG	6 cut(s)	81, 417, 1227, 1380, 2642, 3134
HaeII	RGCGCY	1 cut(s)	1309
HaeIII	GGCC	5 cut(s)	2974, 3110, 3509, 3705, 3776
HgaI	GACGC	2 cut(s)	332, 2273
HhaI	GCGC	5 cut(s)	462, 1308, 1828, 1970, 2724
Hin1I	GRCGYC	2 cut(s)	2284, 3199
Hin6I	GCGC	5 cut(s)	460, 1306, 1826, 1968, 2722
HinP1I	GCGC	5 cut(s)	460, 1306, 1826, 1968, 2722
HincII	GTYRAC	2 cut(s)	1254, 2256
HindII	GTYRAC	2 cut(s)	1254, 2256
HindIII	AAGCTT	2 cut(s)	1233, 2687
HpaI	GTTAAC	1 cut(s)	2256
HphI	GGTGA	4 cut(s)	311, 1594, 2618, 3414
Hpy99I	CGWCG	5 cut(s)	348, 1809, 2619, 3201, 3204
HpyAV	CCTTC	5 cut(s)	428, 491, 1681, 2182, 3222
Hsp92I	GRCGYC	2 cut(s)	2284, 3199
HspAI	GCGC	5 cut(s)	460, 1306, 1826, 1968, 2722
Ksp22I	TGATCA	1 cut(s)	748
KspAI	GTTAAC	1 cut(s)	2256
LmnI	GCTCC	8 cut(s)	13, 197, 308, 398, 649, 1149, 2661, 3482
MaeI	CTAG	5 cut(s)	84, 575, 2318, 2678, 2954
MaeIII	GTNAC	3 cut(s)	173, 558, 1571
MbiI	CCGCTC	1 cut(s)	3034
MfeI	CAATTG	2 cut(s)	963, 1518
MflI	RGATCY	2 cut(s)	1186, 2833
MhlI	GDGCHC	5 cut(s)	202, 1371, 2233, 3487, 3701
MlyI	GAGTC	3 cut(s)	1884, 2873, 3559
MmeI	TCCRAC	5 cut(s)	613, 2274, 2523, 2834, 3945
Mph1103I	ATGCAT	3 cut(s)	820, 2942, 3654
MroXI	GAANNNNTTC	1 cut(s)	1551
MslI	CAYNNNNRTG	3 cut(s)	165, 332, 1865
MspA1I	CMGCKG	2 cut(s)	1931, 2795
MspCI	CTTAAG	1 cut(s)	1729
MspR9I	CCNGG	8 cut(s)	60, 1206, 2660, 2674, 3089, 3446, 3644, 3702
MunI	CAATTG	2 cut(s)	963, 1518
Mva1269I	GAATGC	1 cut(s)	3867
MvaI	CCWGG	8 cut(s)	60, 1206, 2660, 2674, 3089, 3446, 3644, 3702
MvnI	CGCG	3 cut(s)	1828, 1968, 3979
NcoI	CCATGG	1 cut(s)	2739
NdeI	CATATG	1 cut(s)	3370
NlaIV	GGNNCC	5 cut(s)	1416, 2745, 3189, 3450, 3484
NmuCI	GTSAC	2 cut(s)	173, 558
NsiI	ATGCAT	3 cut(s)	820, 2942, 3654
NspI	RCATGY	1 cut(s)	1243
NspV	TTCGAA	1 cut(s)	1555
PagI	TCATGA	1 cut(s)	834
PceI	AGGCCT	2 cut(s)	2974, 3705
PctI	GAATGC	1 cut(s)	3867
PdmI	GAANNNNTTC	1 cut(s)	1551
PflMI	CCANNNNNTGG	1 cut(s)	1390
PfoI	TCCNGGA	1 cut(s)	2658
PleI	GAGTC	3 cut(s)	1884, 2872, 3558
PpsI	GAGTC	3 cut(s)	1884, 2872, 3558
Ppu21I	YACGTR	2 cut(s)	111, 1958
PshBI	ATTAAT	3 cut(s)	138, 264, 954
PsiI	TTATAA	1 cut(s)	1983
Psp1406I	AACGTT	2 cut(s)	1647, 2302
Psp6I	CCWGG	8 cut(s)	58, 1204, 2658, 2672, 3087, 3444, 3642, 3700
PspEI	GGTNACC	1 cut(s)	1571
PspFI	CCCAGC	1 cut(s)	3337
PspGI	CCWGG	8 cut(s)	58, 1204, 2658, 2672, 3087, 3444, 3642, 3700
PspN4I	GGNNCC	5 cut(s)	1416, 2745, 3189, 3450, 3484
PspPI	GGNCC	2 cut(s)	2769, 3508
PsrI	GAACNNNNNNTAC	2 cut(s)	1324, 1356
PstI	CTGCAG	1 cut(s)	3181
PstNI	CAGNNNCTG	1 cut(s)	239
PsuI	RGATCY	2 cut(s)	1186, 2833
PvuII	CAGCTG	2 cut(s)	1931, 2795
RsaI	GTAC	9 cut(s)	1127, 1453, 1776, 1812, 2463, 3157, 3335, 3736, 3743
RsaNI	GTAC	9 cut(s)	1126, 1452, 1775, 1811, 2462, 3156, 3334, 3735, 3742
RseI	CAYNNNNRTG	3 cut(s)	165, 332, 1865
Sau96I	GGNCC	2 cut(s)	2769, 3508
ScaI	AGTACT	1 cut(s)	1776
SchI	GAGTC	3 cut(s)	1884, 2873, 3559
ScrFI	CCNGG	8 cut(s)	60, 1206, 2660, 2674, 3089, 3446, 3644, 3702
SduI	GDGCHC	5 cut(s)	202, 1371, 2233, 3487, 3701
SfcI	CTRYAG	2 cut(s)	2288, 3177
SfuI	TTCGAA	1 cut(s)	1555
SinI	GGWCC	1 cut(s)	2769
SmiMI	CAYNNNNRTG	3 cut(s)	165, 332, 1865
SmlI	CTYRAG	4 cut(s)	767, 1729, 2135, 3614
SmoI	CTYRAG	4 cut(s)	767, 1729, 2135, 3614
SnaBI	TACGTA	2 cut(s)	111, 1958
SseBI	AGGCCT	2 cut(s)	2974, 3705
SsiI	CCGC	7 cut(s)	18, 678, 1828, 3034, 3191, 3935, 3977
SspMI	CTAG	5 cut(s)	84, 575, 2318, 2678, 2954
StuI	AGGCCT	2 cut(s)	2974, 3705
StyD4I	CCNGG	8 cut(s)	58, 1204, 2658, 2672, 3087, 3444, 3642, 3700
StyI	CCWWGG	2 cut(s)	2739, 2953
TatI	WGTACW	6 cut(s)	1125, 1451, 1774, 2461, 3734, 3741
TauI	GCSGC	2 cut(s)	680, 3979
TscAI	CASTG	7 cut(s)	301, 476, 2154, 2165, 3017, 3165, 3536
TseFI	GTSAC	2 cut(s)	173, 558
Tsp45I	GTSAC	2 cut(s)	173, 558
TspGWI	ACGGA	1 cut(s)	3236
TspRI	CASTG	7 cut(s)	301, 476, 2154, 2165, 3017, 3165, 3536
Van91I	CCANNNNNTGG	1 cut(s)	1390
Vha464I	CTTAAG	1 cut(s)	1729
VpaK11BI	GGWCC	1 cut(s)	2769
VspI	ATTAAT	3 cut(s)	138, 264, 954
XapI	RAATTY	6 cut(s)	73, 758, 1160, 1598, 1674, 3417
XceI	RCATGY	1 cut(s)	1243
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3640
XmaJI	CCTAGG	1 cut(s)	2953
XmiI	GTMKAC	3 cut(s)	113, 2287, 3712
XmnI	GAANNNNTTC	1 cut(s)	1551
XspI	CTAG	5 cut(s)	84, 575, 2318, 2678, 2954
ZraI	GACGTC	1 cut(s)	3200
ZrmI	AGTACT	1 cut(s)	1776
Zsp2I	ATGCAT	3 cut(s)	820, 2942, 3654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.