Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0004721

Physical Location & Seq

Genomic Coordinates Reverse (-)

15708334 .. 15718134

Gene Structure 9801 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 6966 bp

ATGGGAATGGCGAACCTGTCGAGCCTCGTCCACGAGCTCCGAGAGCGCATAGCGGCCTCCTCCACTCCTCCTAGCAACCGTTACGACGACGACTTGGTGATCCGATTCCGCGCCGTCCTCCCTGACCTCCTCCGCGCCTCCGTCGTTCCATCTCCCTCAGCGAACGAGCGAGAAGTGATAGCTGTTTTGAAGCTCATCGTTATCACTGCTAGGCATTTGCCCGGAGTTTTCTATCATGGAAAGGCCACCGCAATTCTTCCTCTGCTCGGTCGCATCTTGCCTTTCTTCGCAGAGCCCTCGTTCCGGCATGGAGTAATATTTGAGACTGTTGGACCACTTTTAGCGCTACTTCGTACTGGAGAACGGGATGCCTACCGTCAAATTTTCATTGATTCCATGCTTGTTGTTCGAGATATTTTGTGTGTGGCATCAGTCTGTGCAGACGCTTCAAATATTACGGATTTGACGAAATTGACTTTAAGGTGTTTTTGTGAGTCCTTCAATGGAATTTTTGATGACCCTGATCATCTTGGGGATCTTCCGGCAAGTAATAAACCGGATGATGGGATTGGTGTCTTGATTAACCTTACGGGCAAAACAAGATGGCAACCTTTTGCAACCTGGATGATAAAGCTTCTTGGTAAATGCTTAACCGAAGGAACTCTGTATGTGGAAGGACTCATTAATATGCCTTTTGTTCTGGACGCATGTTCCCTCTTATGTTATGGGGATGCTGATTTGCAGATGGCATGTTTTGAATTTGCACGTGTCGTTGGATCAGGGATAAATTATGACATCCTTCCTCACCAGAATATTATTCAGTCGATATCAACTATCTTAAGGGAGGACAAAGAGGGGTTTCCTGTGTTCAGAAACATCGTTTATGATTCGTCCTTGGGTGGTTGCCTTGATGCATTACACTGTAATTGCCCTGAAGATGTTGTTGAGCTAACAGCTGCCGATTTAGTAGATGTCTTTTCTCATTCAATGGGGAGAACCAAAAGCCAGGAGCTTAAGGTTGCGCTGTGCAATGCATACATACGGATTGCAAAAATATGCTCTCCTAATATCTGGAGGCCAGAATCTCTCCTTTATGTGCTTTCTTATCCAGAACCCTGCTTCTCGTTGATAGATTGCCTACAAGTAGCTCTCTCTATACTTGGTCCCAATCTTGTTGGATGGAGAATTACAAACAGCAACTGTCAGAGTTTATCATCACTAAGTGACAAATCAAATGAAAACTCGAGGGTTGGAGAAAAAAGGCCTATAGAGGATTTGGACACTTTCAAGAATAAACGGCAAAGGGTAGATGAAGATATTATGAGTTTGCATTCTAATTTTCAGGGGGAGCACAAGCGTACTCATACAGTTGCTTGTGAAAGAGAGAATTATGCAGATTATATGCATAAATCGGTACTTTCTTTTGTTGAATCTTTAGAACCTCCTGGTGTCCATCCTGATTCTTTAAGACCAGATGCCGCATTAAGAGCTCTTAGCATGCTTTGCATTGCCTTCTGTAGTTATCCAGAGACCAATCTGTCACTAAGCATCTTTCGTCAGATGTACACATGGATGCCACGGGTATTCCAGCAGGCAAAGCAAGGAATTTCAGTTGCACTTGATATTTCCATCTACCTGGAAGGAATTCACAGCATGCTGCTTTTGCAGAGTCCCTTAATGATGGAGAGTATGGGGTTCAAAAATAAGAATGTTGCTGCAGACCTTGTATGCATCCTAAAGCTTCCGTGGACCTATCCTCGTGTAGTTCCTGACCCACATCCTCTGTGGAAACTTAAATGCATCTCTGTTCAAGTTGCATGCAAACTTGGTAATATAACAAGTACTGAAACTCAGCTTGAAGTCCTGGATTTGAGCCTTCATGATGAATTTGAAGAAGTTATTATTGAAGCTATAATCTCTATGCCTATGATTGTCATGTGGTCTGGTGTTGGTTGGCTGCCACATATATCAAGAAGGCTTCTTGAGTTCTTGGGGGGAGAGAGAAGTGAGAAGGTTAAGAATATTATTCCCTCTTCTCTTGGTTTTTTGTCGTGCCTGTTTGGTTCTTGTAATGATGGAGATGGTATGAATAGAAGTCGGTGCAAATTAATTTTAAATATGAATAATGAGAAATGTAGCCAAACAGTGGATTATCTTCTGCAAGGATTCTGGTGTTCAGAGTGTGACAAAAGTGTTCAACTCAATACTGAGTCATGTTCAAAAGTGATATATCCACCTGATATGCACAACAGAGAAACGAGTTTGGATTGTGATTTTGCCCATCTGCAGTCTCTGTTTCTCAAACTTCTTTATGATGAATCATCGGAGGAGGTCCAAGTTGCTTGTGTGAAAAATATTCGCCGAATATTTGTACATGGGAGCATAAGGAATCTGATTGTGTCTAGATTTGAATGGATTAAATGTGTGGAATATTTACTCCTTAATGGGAAGAAGGCTGTAAGGGATGCATTCTGCACTCAGATTAGTTCATTCCTTGAGGATTCTTTTTTGAGCTGCTTATTTCCTGTTGAGGACGCATCGAATAAAAGTAAAGAACAAGAGTTTTTTAACATAATGAAGCATGCCTTTTCAGAAACTAAAGATCCCCAAATCTTTGAGACTCTTTTGGAATCTACAGCAGAAATAATGATTGCAGTTGACATTCACAGTCAATTGTTCTTGTTTTCTGTATTATTGTTGGTTGATCAGCTTGATAATCCACACATGACAGTGAGACTGATGGCATCAAAGTTGATAAAGAAATCTTGCTACTTTCATCTTAAAGGAGGATTTGAACTAATCCTTTCAAAAGTTGTTCATGTTCGAAATGAACTATTTGATTATTTATCTGTGAGGCTGTCTAGCCGTCCAATTATGGTCAAAGAGTTTACAGAATCCGTTCTTGGTATTGCAACAGAAGAACTTGTCAAGAAAATGATTCCTACTGTTCTTCCGAAACTTGTAGTGTCTCAGCAGGGTGATGATCGATCACTTGAAACATTATATGAACTGGCCAAGTGTTTAAACACTGATTTGGTGCCTCTTATAGTTAATTGGCTACCAAAAGTGCTAGCTTTTGCTCTCCATCAAGTAGATGCACGAGAGTTAGTTGTTGCTTTGCAGTTTTACCATACGCAGACTGGTTCTGACAAACAAGAAATCTTCGCAGCTGCATTACCTGCCCTTTTGGACGAACTCATATGCTTTTTAGATGGAGGTGATTCAGATGAGATAAACAGAAGGTTAGCAAGAGTTCCTGAGATGATAAAAGAGGTTGCTAGAGTTCTGACTGGTGGTGAAGATCTTCCAAGCTTTTTGAGGAATCATTTTGTTGGCCTTCTTAACAGTATTGACAGAAAGATGCTCCATGCAGAAGACATTTCATTGCATAAACAAGCCTTACAACGTATTGAGATGCTGATTAAAATGATGGGTTCTCACCTTACTACTTATGTGCCTAAACTGATGGTTCTTCTCATGCATGCTATTGGTAAAGAAGCCCTCCAGAGTGAGGGTCTTTCTGTGCTGCATTTTTTCATTGTGCAGCTGGTAAAAATATCGCCAGATAGCACTAAACATGTTATCTCTCAAGTTTTTGCTGCCCTTATTCCTTTTTTAGAGAGACATGACGAAAATCCTATACATCTAGATAAAGTGGTAAACATTTTGGAAGAACTTGTACTAAATAACAGGGCCGTTCTAAAGCTGCATATACGCGAGTTCCCTCCGTTGCCCAGCATTTCAGCTCTAATAGAAGTGAACAAAGCTATACAAGAAGTGCGAGGGTCAATGAAATTGAAGGATCGATTGCGTGATGTCGTTGATGGTTTGAATCATGAGAGCTTAAATGTGAGATATATGGTAGTTTGTGAGTTGAGCAAGTTGCTGAGCCTGAAACAGGAAGAGGTTACAGCTCTGATAACTGCTGAAGGTGGTACAGATATGGATATTTTGAGTTCTTTAATTACATCCTTACTAAGAGGATGCGCAGAAGAATCAAGGACCGCAGTTGGACAGCGGCTGAAGTTGGTCTGTGCTGATTGCCTTGGGGCCCTGGGAGCGGTTGATCCTGCTAAACTGAAAGGATTTTCATGCCAACGCTTTAAAATTGAATGCTCCGATGATGACCTTATATATGAGTTAATTCACAAGCACCTTGCAAGGGCTTTTAGAGCTGCACCTGACACTGTAATTCAAGACTCAGCTGCATTGGCTATACAGGAACTGTTAAAGATTGCAGGTTGTGAGGCCTCTTTAGATGAGAATGCTTCTTCATCCACATCAGAGACTCCTAAGGGCAAAGAGCCTTTAAATGTTGCTGCATCTGGGATTAAGGGTACTGATGGTAGCAGTGAGATGAATAGAAGGGGTCAGAGATTATGGGATAGATTCTCCAATTATGTTAAAGAGATAATTGCCCCTTGCTTAACCTCTAGGTTTCAACTTCCCAATTTTGCTGATTCTTCATTTGTCGGCCCAATTTACAGGCCATCTATGTCATTCAGGAGATGGATATTCTCCTGGATAAGAAAGCTGACTGCACATGCCACTGGTTCTCGTAGCAGCATTTTCAATTCCTGTCGAGGTATTGTGCGTCATGATATGCAGACAGCAATATATCTGCTTCCATATCTGGTTCTTAATGCTGTTTGTCATGGCACGGAGGAGGCACGTCATGGCATAACAGAAGAAATCCTACATGTTCTTGATGTTGCAGCATCTGATAACAGTGGGGATGGAGCTCATGGAGTGAAGGGTGGGAAAATTGAAGTTTGCATTCAAGCTGTGTTCACTCTCCTTGATAATCTTGGTCAATGGGTGGATGACATTAAACAAGAATTAGCTCTTTCCCAGGCTTCTCAATCACTGGCTTCTAAGCAACAAGCATCCAAGACAAGGGATCGATCTCGTAGCTCTTCTGCAGATCAGGAGCGTCTCCTTGTACAATGTAAATATGTTTCAGAACTGTTGTCAGCAATTCCTAAGGTAACCCTTGCCAGGGCCTCCTTCAGGTGCCAGGCTTATGCAAGGTCTTTAATGTACTTTGAGTCATACGTGAGGGGAAAGTCAGGTTCTTTCAACCCTGCATCTGATAAAAGTGGCATCTTTGATGATGAAGACGTTTCATATCTAATGGAAATATACAGCTGCCTAGATGAGCCTGATGGTCTTTCTGGCTTTGCATGTTTACGTAAATCTATGGGATTACAGTTACAGGACCAGCTCTTAATAAACAAAAAAGCGGGAAACTGGGCAGAGGCTTTAACTTCTTGTGAACAAGCTTTGCAAATGGAACCAACATCAGTTCAAAGGCATTCTGATGTCCTTAACTGTTTGTTAAACATGTGTCACCTTCAGGCAATGGTTACTCATGTGGATGGCTTAATCTCTAGGGTTCCCCAGTACAAGAAAACATGGTGCATGCAAGGTGTGCAGGCAGCATGGAGGCTTGGCAGGTGGGATTTGATGGATGAATATCTTAATGGAGCTGATGAAGAAGGTCTACTTTGTAGCAGTTCTGAAAGTAATGCCTCATTTGATATGGATGTTGCAAAGATTCTCCAGGCAATGATGAAGAAGGATCAGTTCTCAGTTGCTGAAAAAATTGCCCTCTCAAAGCAAGCGCTCATTGCTCCTCTCGCTGCTGCAGGCATGGATTCCTATGTACGGGCCTACCCATTTGTTGTAAAACTTCACCTTCTACGAGAGCTTGAGGACTTTCACTCTCTTCTTGTTGATAATTCTTTCTTGGAGAAATCATTTCAACTGGGTGATCATGGGTTCTCCCAGTTGATGGAGAACTGGGAAAACCGTCTCAGGTTTACACAGCCATCACTCTGGGCAAGAGAGCCACTTTTGGCCTTCCGCAGATTAGTTTTTGCTGCCAGTGCTTTGGGTGCTCAAGTTGGGAACTGCTGGCTTCAATATGCAAAGCTCTGTCGCATGGCTGGTCATTATGAGACAGCAAACCAGGCGATTCTAGAAGCTCAAGCTACAGGTGGACCTAATGTTCACATGGAGAAGGCTAAACTTCTATGGAGCACCCGGCGATCTGATGGTGCCATTGCACAGTTGCAGCAGTCTCTCCTGAACATGCCTGTAGAGATTGTTGGTTCCTCTGCAATTTCATCAATTACTAGTCTTTCACTGGTTCCACTGAACCAGCCGCTGTTAGTTTGTGATACTCAAGCTTTGAATGAGAATCGAGATATTGCAAAGACCCTACTCCTCTATACTAGGTGGATCCAACACACTAGGCAAAAGCAGAAAGAAGATGTATTATGTCTTTATACGAGGGTGAGGGAACTGCAGCCTAAGTGGGAGAAAGGATATTTCTACATTGCTAAGTATTGTGAGGAATTGCTTGCTGATGCCAGGAAACGCCAGGAAGAAAATATAGAACTCAGTGCAAGGAAAATGCCATCAAATAGTGCTATTGTTGGTTCTCCAAATTTAAGCACTGAGAAGCCTTGGTGGTTGTATGTACCTGATGTACTGTTATTTTATGCAAGGGGGCTTCTTAAGGGTCACAAAAATCTCTTTCAAGCACTTCCAAGATTGTTAACCCTATGGTTTGACTTTGGAAGTATGTATCTAACATGTGGCACAGCATCCAGTAAAGAGTTGAAAAAAACTCATGAGAAGGTAATAAAAATCATGCAAGGATGTTTGAAGGATTTGCCAACGTACCAGTGGTTAACAGTACTACCCCAGTTGGTTTCCAGAATTTGCCACCAGAATGAGGAAGTTGTTCGATTGGTCAAAAACATAATAACAACTGTTCTCCGGCAATACCCACAACAAGCGCTCTGGATTATGGCGGCAGTTTCAAAATCGACTGTTCCTTCAAGGCGGGAGGCAGCTGCAGAAATCCTACAGGCTGCACGAAAAGGGTTCACCCAAGGAAATACGGGTAGCAATCTATTTGTTCAGTTTGCAAGTCTGATTGATCGATCCTGCACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000723 GO:0000726 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005911 GO:0006139 GO:0006259 GO:0006278 GO:0006281 GO:0006282 GO:0006302 GO:0006303 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007004 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009314 GO:0009506 GO:0009628 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010212 GO:0010332 GO:0010833 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0022414 GO:0030054 GO:0031323 GO:0031347 GO:0032200 GO:0032204 GO:0032501 GO:0032504 GO:0033043 GO:0033044 GO:0033554 GO:0034641 GO:0034645 GO:0034654 GO:0042221 GO:0042592 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043247 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0046483 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051128 GO:0051171 GO:0051276 GO:0051321 GO:0051716 GO:0055044 GO:0060249 GO:0060255 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071897 GO:0080090 GO:0080134 GO:0080135 GO:0090304 GO:1901360 GO:1901362 GO:1901576 GO:2001020

KEGG Pathways

Metabolic & Signaling

ko03460 ko04110 ko04115 ko04214 ko04218 ko05165 ko05166 map03460 map04110 map04115 map04214 map04218 map05165 map05166

Pfam Domains

Protein Families

FAT FATC PI3_PI4_kinase UME

Protein Analysis

2322

Amino Acids

260.39

Weight (kDa)

6.28

Isoelectric Point (pI)

49.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UME	PF08064	1105 - 1205	3.4e-18	UME (NUC010) domain
M-HEAT_ATR	PF25030	1493 - 1728	1.3e-33	Serine/threonine-protein kinase ATR, M-HEAT region
FAT	PF02259	1810 - 2189	1.5e-54	FAT domain
HEAT_ATR	PF23593	2215 - 2315	9e-33	Serine/threonine-protein kinase ATR-like, HEAT repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

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Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0004721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G40820 AT5G40820 AT5G40820 AT5G40820
fragaria_vesca	FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770 FvH4_2g15770
malus_domestica	MD05G1126600.v1.1
prunus_persica	Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1 Prupe.8G170300_v2.0.a1
pyrus_communis	pycom05g12250 pycom10g11100 pycom10g11110
rosa_chinensis	RchiOBHm_Chr6g0279121
rosa_laevigata	RLG00000013166
rosa_multiflora	Rmu_sc0014203.1_g000022
rosa_roxburghii	Rroxscaffold_7G00189110
rosa_rugosa	Rorug06G0122400
rosa_samantha	Rh6AG231100 Rh6BG236000 Rh6CG238100 Rh6DG229700
rosa_wichuraiana	Rw6G020240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	5445
AasI	GACNNNNNNGTC	1 cut(s)	1537
Acc16I	TGCGCA	1 cut(s)	3988
Acc36I	ACCTGC	3 cut(s)	3187, 4229, 5445
AccB1I	GGYRCC	3 cut(s)	3037, 5013, 6059
AccB7I	CCANNNNNTGG	2 cut(s)	2146, 5794
AccBSI	CCGCTC	1 cut(s)	4061
AccI	GTMKAC	1 cut(s)	5503
AccII	CGCG	3 cut(s)	111, 135, 3717
AcoI	YGGCCR	1 cut(s)	3012
AcsI	RAATTY	8 cut(s)	381, 507, 758, 1605, 1644, 1886, 6451, 6726
AcuI	CTGAAG	5 cut(s)	954, 3948, 4043, 4993, 5339
AcvI	CACGTG	1 cut(s)	767
AdeI	CACNNNGTG	1 cut(s)	1223
AfeI	AGCGCT	3 cut(s)	345, 5625, 6807
AflII	CTTAAG	3 cut(s)	838, 1013, 6521
AflIII	ACRYGT	5 cut(s)	766, 3577, 4699, 5343, 6599
AhlI	ACTAGT	1 cut(s)	6137
AjiI	CACGTC	1 cut(s)	4673
AjuI	GAANNNNNNNTTGG	2 cut(s)	2886, 2918
AloI	GAACNNNNNNTCC	2 cut(s)	5994, 6026
Alw21I	GWGCWC	6 cut(s)	39, 1353, 1492, 4744, 5902, 6044
AlwNI	CAGNNNCTG	7 cut(s)	1200, 2293, 4021, 4225, 4721, 5597, 6169
Ama87I	CYCGRG	1 cut(s)	1243
Aor51HI	AGCGCT	3 cut(s)	345, 5625, 6807
ApaI	GGGCCC	1 cut(s)	4054
ApoI	RAATTY	8 cut(s)	381, 507, 758, 1605, 1644, 1886, 6451, 6726
AseI	ATTAAT	2 cut(s)	684, 2108
Asp700I	GAANNNNTTC	4 cut(s)	1644, 2898, 3303, 6750
AspLEI	GCGC	8 cut(s)	48, 113, 137, 346, 1024, 3989, 5626, 6808
AsuC2I	CCSGG	2 cut(s)	222, 6046
AsuII	TTCGAA	1 cut(s)	2824
AsuNHI	GCTAGC	1 cut(s)	3070
AvaI	CYCGRG	1 cut(s)	1243
AvaII	GGWCC	7 cut(s)	332, 1163, 1749, 2332, 4002, 5218, 6002
AxyI	CCTNAGG	2 cut(s)	4293, 4983
BaeGI	GKGCMC	1 cut(s)	4054
BalI	TGGCCA	1 cut(s)	3014
BamHI	GGATCC	1 cut(s)	6243
BanI	GGYRCC	3 cut(s)	3037, 5013, 6059
BanII	GRGCYC	5 cut(s)	39, 297, 1492, 4054, 4744
BarI	GAAGNNNNNNTAC	6 cut(s)	3663, 3695, 4680, 4712, 5487, 5519
BauI	CACGAG	3 cut(s)	32, 1758, 3099
BbrPI	CACGTG	1 cut(s)	767
BbsI	GAAGAC	2 cut(s)	3381, 5124
Bbv12I	GWGCWC	6 cut(s)	39, 1353, 1492, 4744, 5902, 6044
BbvCI	CCTCAGC	1 cut(s)	157
BceAI	ACGGC	4 cut(s)	98, 1313, 2850, 3680
BcgI	CGANNNNNNTGC	2 cut(s)	279, 313
BclI	TGATCA	3 cut(s)	523, 2704, 5773
BcnI	CCSGG	2 cut(s)	222, 6046
BcuI	ACTAGT	1 cut(s)	6137
BfoI	RGCGCY	3 cut(s)	347, 5627, 6809
BfrI	CTTAAG	3 cut(s)	838, 1013, 6521
BfuAI	ACCTGC	3 cut(s)	3187, 4229, 5445
BglII	AGATCT	1 cut(s)	3301
BlpI	GCTNAGC	1 cut(s)	3887
BmcAI	AGTACT	2 cut(s)	1843, 6705
Bme18I	GGWCC	7 cut(s)	332, 1163, 1749, 2332, 4002, 5218, 6002
BmeT110I	CYCGRG	1 cut(s)	1243
BmgBI	CACGTC	1 cut(s)	4673
BmrI	ACTGGG	6 cut(s)	5260, 5395, 5777, 5782, 5812, 6706
BmtI	GCTAGC	1 cut(s)	3074
BmuI	ACTGGG	6 cut(s)	5260, 5395, 5777, 5782, 5812, 6706
BpiI	GAAGAC	2 cut(s)	3381, 5124
BpmI	CTGGAG	4 cut(s)	378, 1093, 3488, 5546
Bpu10I	CCTNAGC	1 cut(s)	157
Bpu1102I	GCTNAGC	1 cut(s)	3887
Bpu14I	TTCGAA	1 cut(s)	2824
BpuEI	CTTGAG	7 cut(s)	2003, 2516, 3573, 5732, 5886, 5973, 6171
BpuMI	CCSGG	2 cut(s)	222, 6046
Bsa29I	ATCGAT	4 cut(s)	2986, 3805, 4903, 6952
BsaAI	YACGTR	3 cut(s)	767, 5056, 5192
BsaBI	GATNNNNATC	1 cut(s)	5475
BsaI	GGTCTC	1 cut(s)	1523
BsaWI	WCCGGW	1 cut(s)	556
Bse21I	CCTNAGG	2 cut(s)	4293, 4983
Bse3DI	GCAATG	8 cut(s)	1036, 1506, 3383, 5367, 5574, 5628, 6063, 6339
Bse8I	GATNNNNATC	1 cut(s)	5475
BseCI	ATCGAT	4 cut(s)	2986, 3805, 4903, 6952
BseJI	GATNNNNATC	1 cut(s)	5475
BseMI	GCAATG	8 cut(s)	1036, 1506, 3383, 5367, 5574, 5628, 6063, 6339
BseRI	GAGGAG	7 cut(s)	49, 57, 119, 2342, 4679, 5625, 6218
BseSI	GKGCMC	1 cut(s)	4054
BseYI	CCCAGC	1 cut(s)	3734
BsgI	GTGCAG	8 cut(s)	459, 2458, 3563, 4161, 4524, 5453, 6867, 6943
Bsh1236I	CGCG	3 cut(s)	111, 135, 3717
Bsh1285I	CGRYCG	1 cut(s)	271
BshNI	GGYRCC	3 cut(s)	3037, 5013, 6059
BshVI	ATCGAT	4 cut(s)	2986, 3805, 4903, 6952
BsiEI	CGRYCG	1 cut(s)	271
BsiHKAI	GWGCWC	6 cut(s)	39, 1353, 1492, 4744, 5902, 6044
BsiHKCI	CYCGRG	1 cut(s)	1243
BsiSI	CCGG	6 cut(s)	222, 304, 542, 557, 6046, 6787
BslFI	GGGAC	2 cut(s)	1149, 1656
BsmBI	CGTCTC	2 cut(s)	4940, 5819
BsmFI	GGGAC	2 cut(s)	1149, 1656
BsmI	GAATGC	6 cut(s)	1330, 2468, 4118, 4270, 4776, 5314
Bso31I	GGTCTC	1 cut(s)	1523
BsoBI	CYCGRG	1 cut(s)	1243
Bsp119I	TTCGAA	1 cut(s)	2824
Bsp120I	GGGCCC	1 cut(s)	4050
Bsp1286I	GDGCHC	8 cut(s)	39, 297, 1353, 1492, 4054, 4744, 5902, 6044
Bsp1407I	TGTACA	3 cut(s)	1563, 2371, 4942
Bsp1720I	GCTNAGC	1 cut(s)	3887
BspDI	ATCGAT	4 cut(s)	2986, 3805, 4903, 6952
BspFNI	CGCG	3 cut(s)	111, 135, 3717
BspHI	TCATGA	4 cut(s)	1879, 3835, 4597, 6637
BspMAI	CTGCAG	6 cut(s)	1720, 2289, 4924, 5650, 6312, 6868
BspMI	ACCTGC	3 cut(s)	3187, 4229, 5445
BspOI	GCTAGC	1 cut(s)	3074
BspQI	GCTCTTC	1 cut(s)	4921
BspT104I	TTCGAA	1 cut(s)	2824
BspT107I	GGYRCC	3 cut(s)	3037, 5013, 6059
BspTI	CTTAAG	3 cut(s)	838, 1013, 6521
BspTNI	GGTCTC	1 cut(s)	1523
BsrBI	CCGCTC	1 cut(s)	4061
BsrDI	GCAATG	8 cut(s)	1036, 1506, 3383, 5367, 5574, 5628, 6063, 6339
BsrGI	TGTACA	3 cut(s)	1563, 2371, 4942
BssSI	CACGAG	3 cut(s)	32, 1758, 3099
BssT1I	CCWWGG	4 cut(s)	894, 4045, 6470, 6901
Bst2BI	CACGAG	3 cut(s)	32, 1758, 3099
Bst6I	CTCTTC	4 cut(s)	2038, 3897, 4921, 5733
BstAFI	CTTAAG	3 cut(s)	838, 1013, 6521
BstAPI	GCANNNNNTGC	3 cut(s)	1503, 3179, 5431
BstAUI	TGTACA	3 cut(s)	1563, 2371, 4942
BstBAI	YACGTR	3 cut(s)	767, 5056, 5192
BstBI	TTCGAA	1 cut(s)	2824
BstDSI	CCRYGG	2 cut(s)	1577, 1745
BstEII	GGTNACC	1 cut(s)	4987
BstENI	CCTNNNNNAGG	2 cut(s)	3896, 5008
BstFNI	CGCG	3 cut(s)	111, 135, 3717
BstH2I	RGCGCY	3 cut(s)	347, 5627, 6809
BstHHI	GCGC	8 cut(s)	48, 113, 137, 346, 1024, 3989, 5626, 6808
BstMCI	CGRYCG	1 cut(s)	271
BstPI	GGTNACC	1 cut(s)	4987
BstSLI	GKGCMC	1 cut(s)	4054
BstSNI	TACGTA	1 cut(s)	5192
BstUI	CGCG	3 cut(s)	111, 135, 3717
BstV2I	GAAGAC	2 cut(s)	3381, 5124
BstX2I	RGATCY	4 cut(s)	535, 2602, 3301, 6243
BstXI	CCANNNNNNTGG	3 cut(s)	1636, 5838, 5893
BstYI	RGATCY	4 cut(s)	535, 2602, 3301, 6243
Bsu15I	ATCGAT	4 cut(s)	2986, 3805, 4903, 6952
Bsu36I	CCTNAGG	2 cut(s)	4293, 4983
BsuTUI	ATCGAT	4 cut(s)	2986, 3805, 4903, 6952
BtgI	CCRYGG	2 cut(s)	1577, 1745
BtrI	CACGTC	1 cut(s)	4673
BtsI	GCAGTG	2 cut(s)	204, 4357
BveI	ACCTGC	3 cut(s)	3187, 4229, 5445
CaiI	CAGNNNCTG	7 cut(s)	1200, 2293, 4021, 4225, 4721, 5597, 6169
CciI	TCATGA	4 cut(s)	1879, 3835, 4597, 6637
CfoI	GCGC	8 cut(s)	48, 113, 137, 346, 1024, 3989, 5626, 6808
ClaI	ATCGAT	4 cut(s)	2986, 3805, 4903, 6952
CseI	GACGC	5 cut(s)	452, 713, 2543, 4583, 4922
DraI	TTTAAA	4 cut(s)	2115, 3024, 4105, 4311
DraIII	CACNNNGTG	1 cut(s)	1223
DrdI	GACNNNNNNGTC	1 cut(s)	1537
DseDI	GACNNNNNNGTC	1 cut(s)	1537
EaeI	YGGCCR	1 cut(s)	3012
Eam1104I	CTCTTC	4 cut(s)	2038, 3897, 4921, 5733
EarI	CTCTTC	4 cut(s)	2038, 3897, 4921, 5733
Ecl136II	GAGCTC	3 cut(s)	37, 1490, 4742
Eco105I	TACGTA	1 cut(s)	5192
Eco130I	CCWWGG	4 cut(s)	894, 4045, 6470, 6901
Eco147I	AGGCCT	2 cut(s)	1264, 4250
Eco24I	GRGCYC	5 cut(s)	39, 297, 1492, 4054, 4744
Eco31I	GGTCTC	1 cut(s)	1523
Eco32I	GATATC	1 cut(s)	828
Eco47I	GGWCC	7 cut(s)	332, 1163, 1749, 2332, 4002, 5218, 6002
Eco47III	AGCGCT	3 cut(s)	345, 5625, 6807
Eco53kI	GAGCTC	3 cut(s)	37, 1490, 4742
Eco57I	CTGAAG	5 cut(s)	954, 3948, 4043, 4993, 5339
Eco72I	CACGTG	1 cut(s)	767
Eco81I	CCTNAGG	2 cut(s)	4293, 4983
Eco88I	CYCGRG	1 cut(s)	1243
Eco91I	GGTNACC	1 cut(s)	4987
EcoICRI	GAGCTC	3 cut(s)	37, 1490, 4742
EcoNI	CCTNNNNNAGG	2 cut(s)	3896, 5008
EcoO109I	RGGNCCY	3 cut(s)	4050, 4051, 5001
EcoO65I	GGTNACC	1 cut(s)	4987
EcoRI	GAATTC	1 cut(s)	1644
EcoRV	GATATC	1 cut(s)	828
EcoT14I	CCWWGG	4 cut(s)	894, 4045, 6470, 6901
EcoT22I	ATGCAT	7 cut(s)	916, 1036, 1407, 1733, 1802, 2470, 3483
EcoT38I	GRGCYC	5 cut(s)	39, 297, 1492, 4054, 4744
ErhI	CCWWGG	4 cut(s)	894, 4045, 6470, 6901
Esp3I	CGTCTC	2 cut(s)	4940, 5819
FalI	AAGNNNNNCTT	4 cut(s)	2570, 2602, 5490, 5522
FaqI	GGGAC	2 cut(s)	1149, 1656
FauI	CCCGC	2 cut(s)	5236, 6846
FauNDI	CATATG	1 cut(s)	3200
FbaI	TGATCA	3 cut(s)	523, 2704, 5773
FblI	GTMKAC	1 cut(s)	5503
FriOI	GRGCYC	5 cut(s)	39, 297, 1492, 4054, 4744
FspI	TGCGCA	1 cut(s)	3988
GlaI	GCGC	8 cut(s)	47, 112, 136, 345, 1023, 3988, 5625, 6807
GsaI	CCCAGC	1 cut(s)	3738
GsuI	CTGGAG	4 cut(s)	378, 1093, 3488, 5546
HaeII	RGCGCY	3 cut(s)	347, 5627, 6809
HapII	CCGG	6 cut(s)	222, 304, 542, 557, 6046, 6787
HgaI	GACGC	5 cut(s)	452, 713, 2543, 4583, 4922
HhaI	GCGC	8 cut(s)	48, 113, 137, 346, 1024, 3989, 5626, 6808
Hin6I	GCGC	8 cut(s)	46, 111, 135, 344, 1022, 3987, 5624, 6806
HinP1I	GCGC	8 cut(s)	46, 111, 135, 344, 1022, 3987, 5624, 6806
HincII	GTYRAC	3 cut(s)	2659, 6564, 6699
HindII	GTYRAC	3 cut(s)	2659, 6564, 6699
HindIII	AAGCTT	5 cut(s)	632, 1739, 3310, 5280, 6189
HpaI	GTTAAC	2 cut(s)	6564, 6699
HpaII	CCGG	6 cut(s)	222, 304, 542, 557, 6046, 6787
Hpy99I	CGWCG	3 cut(s)	89, 92, 146
HpyCH4IV	ACGT	7 cut(s)	766, 3406, 4672, 5055, 5121, 5191, 6686
HpySE526I	ACGT	7 cut(s)	766, 3406, 4672, 5055, 5121, 5191, 6686
HspAI	GCGC	8 cut(s)	46, 111, 135, 344, 1022, 3987, 5624, 6806
Ksp22I	TGATCA	3 cut(s)	523, 2704, 5773
KspAI	GTTAAC	2 cut(s)	6564, 6699
LguI	GCTCTTC	1 cut(s)	4921
MaeII	ACGT	7 cut(s)	766, 3406, 4672, 5055, 5121, 5191, 6686
MbiI	CCGCTC	1 cut(s)	4061
MfeI	CAATTG	1 cut(s)	2672
MflI	RGATCY	4 cut(s)	535, 2602, 3301, 6243
MhlI	GDGCHC	8 cut(s)	39, 297, 1353, 1492, 4054, 4744, 5902, 6044
MlsI	TGGCCA	1 cut(s)	3014
MluNI	TGGCCA	1 cut(s)	3014
MlyI	GAGTC	8 cut(s)	503, 672, 1678, 2219, 2614, 4193, 4282, 5057
MmeI	TCCRAC	6 cut(s)	310, 754, 1156, 1231, 3991, 6271
Mox20I	TGGCCA	1 cut(s)	3014
Mph1103I	ATGCAT	7 cut(s)	916, 1036, 1407, 1733, 1802, 2470, 3483
MroXI	GAANNNNTTC	4 cut(s)	1644, 2898, 3303, 6750
MscI	TGGCCA	1 cut(s)	3014
MslI	CAYNNNNRTG	6 cut(s)	686, 1571, 2729, 5319, 5376, 6738
Msp20I	TGGCCA	1 cut(s)	3014
MspA1I	CMGCKG	8 cut(s)	956, 3170, 3547, 4018, 4205, 5148, 6169, 6863
MspCI	CTTAAG	3 cut(s)	838, 1013, 6521
MspI	CCGG	6 cut(s)	222, 304, 542, 557, 6046, 6787
MssI	GTTTAAAC	1 cut(s)	3024
MunI	CAATTG	1 cut(s)	2672
Mva1269I	GAATGC	6 cut(s)	1330, 2468, 4118, 4270, 4776, 5314
MvnI	CGCG	3 cut(s)	111, 135, 3717
NciI	CCSGG	2 cut(s)	222, 6046
NdeI	CATATG	1 cut(s)	3200
NheI	GCTAGC	1 cut(s)	3070
NmuCI	GTSAC	5 cut(s)	1223, 1539, 2183, 5348, 6527
NsbI	TGCGCA	1 cut(s)	3988
NsiI	ATGCAT	7 cut(s)	916, 1036, 1407, 1733, 1802, 2470, 3483
NspV	TTCGAA	1 cut(s)	2824
PaeI	GCATGC	6 cut(s)	1501, 1657, 1821, 2585, 3485, 5425
PaeR7I	CTCGAG	1 cut(s)	1243
PagI	TCATGA	4 cut(s)	1879, 3835, 4597, 6637
PaqCI	CACCTGC	1 cut(s)	5445
PasI	CCCWGGG	1 cut(s)	4054
PceI	AGGCCT	2 cut(s)	1264, 4250
PciI	ACATGT	4 cut(s)	3577, 4699, 5343, 6599
PciSI	GCTCTTC	1 cut(s)	4921
PcsI	WCGNNNNNNNCGW	1 cut(s)	464
PctI	GAATGC	6 cut(s)	1330, 2468, 4118, 4270, 4776, 5314
PdmI	GAANNNNTTC	4 cut(s)	1644, 2898, 3303, 6750
PflMI	CCANNNNNTGG	2 cut(s)	2146, 5794
PfoI	TCCNGGA	2 cut(s)	1863, 4520
PleI	GAGTC	8 cut(s)	502, 672, 1677, 2218, 2614, 4193, 4282, 5056
PmaCI	CACGTG	1 cut(s)	767
PmeI	GTTTAAAC	1 cut(s)	3024
PmlI	CACGTG	1 cut(s)	767
PpsI	GAGTC	8 cut(s)	502, 672, 1677, 2218, 2614, 4193, 4282, 5056
Ppu21I	YACGTR	3 cut(s)	767, 5056, 5192
PscI	ACATGT	4 cut(s)	3577, 4699, 5343, 6599
PshBI	ATTAAT	2 cut(s)	684, 2108
Psp124BI	GAGCTC	3 cut(s)	39, 1492, 4744
PspCI	CACGTG	1 cut(s)	767
PspEI	GGTNACC	1 cut(s)	4987
PspFI	CCCAGC	1 cut(s)	3734
PspOMI	GGGCCC	1 cut(s)	4050
PspXI	VCTCGAGB	1 cut(s)	1243
PstI	CTGCAG	6 cut(s)	1720, 2289, 4924, 5650, 6312, 6868
PstNI	CAGNNNCTG	7 cut(s)	1200, 2293, 4021, 4225, 4721, 5597, 6169
PsuI	RGATCY	4 cut(s)	535, 2602, 3301, 6243
PvuII	CAGCTG	6 cut(s)	956, 3170, 3547, 4205, 5148, 6863
RseI	CAYNNNNRTG	6 cut(s)	686, 1571, 2729, 5319, 5376, 6738
SacI	GAGCTC	3 cut(s)	39, 1492, 4744
SapI	GCTCTTC	1 cut(s)	4921
ScaI	AGTACT	2 cut(s)	1843, 6705
SchI	GAGTC	8 cut(s)	503, 672, 1678, 2219, 2614, 4193, 4282, 5057
SduI	GDGCHC	8 cut(s)	39, 297, 1353, 1492, 4054, 4744, 5902, 6044
Sfr274I	CTCGAG	1 cut(s)	1243
SfuI	TTCGAA	1 cut(s)	2824
SinI	GGWCC	7 cut(s)	332, 1163, 1749, 2332, 4002, 5218, 6002
SlaI	CTCGAG	1 cut(s)	1243
SmiMI	CAYNNNNRTG	6 cut(s)	686, 1571, 2729, 5319, 5376, 6738
SnaBI	TACGTA	1 cut(s)	5192
SpeI	ACTAGT	1 cut(s)	6137
SphI	GCATGC	6 cut(s)	1501, 1657, 1821, 2585, 3485, 5425
SseBI	AGGCCT	2 cut(s)	1264, 4250
SspI	AATATT	7 cut(s)	318, 454, 814, 2023, 2356, 2367, 2432
SstI	GAGCTC	3 cut(s)	39, 1492, 4744
StuI	AGGCCT	2 cut(s)	1264, 4250
StyI	CCWWGG	4 cut(s)	894, 4045, 6470, 6901
TaiI	ACGT	7 cut(s)	769, 3409, 4675, 5058, 5124, 5194, 6689
TaqII	GACCGA	1 cut(s)	257
TatI	WGTACW	9 cut(s)	1563, 1841, 2371, 3679, 4942, 5040, 5403, 6493, 6703
TauI	GCSGC	5 cut(s)	56, 1481, 4021, 6169, 6824
TseFI	GTSAC	5 cut(s)	1223, 1539, 2183, 5348, 6527
Tsp45I	GTSAC	5 cut(s)	1223, 1539, 2183, 5348, 6527
TspGWI	ACGGA	7 cut(s)	130, 473, 1057, 1734, 2887, 3717, 4676
Van91I	CCANNNNNTGG	2 cut(s)	2146, 5794
Vha464I	CTTAAG	3 cut(s)	838, 1013, 6521
VpaK11BI	GGWCC	7 cut(s)	332, 1163, 1749, 2332, 4002, 5218, 6002
VspI	ATTAAT	2 cut(s)	684, 2108
XagI	CCTNNNNNAGG	2 cut(s)	3896, 5008
XapI	RAATTY	8 cut(s)	381, 507, 758, 1605, 1644, 1886, 6451, 6726
XbaI	TCTAGA	3 cut(s)	2402, 3646, 5980
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1782, 3137, 6690
XhoI	CTCGAG	1 cut(s)	1243
XmiI	GTMKAC	1 cut(s)	5503
XmnI	GAANNNNTTC	4 cut(s)	1644, 2898, 3303, 6750
ZrmI	AGTACT	2 cut(s)	1843, 6705
Zsp2I	ATGCAT	7 cut(s)	916, 1036, 1407, 1733, 1802, 2470, 3483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.