DNA repair
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G18760 AT2G18760 AT2G18760 AT2G18760 AT2G18760 AT2G18760 AT2G18760 |
| fragaria_vesca | FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 |
| malus_domestica | MD05G1194600.v1.1 |
| prunus_persica | Prupe.8G221300_v2.0.a1 |
| pyrus_communis | pycom05g18190 pycom10g15720 |
| rosa_chinensis | RchiOBHm_Chr6g0287701 |
| rosa_laevigata | RLG00000012472 |
| rosa_multiflora | Rmu_sc0003335.1_g000002 Rmu_sc0037270.1_g000001 Rmu_sc0037271.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00181080 Rroxscaffold_7G00181270 |
| rosa_rugosa | Rorug06G0190800 Rorug06G0190900 Rorug06G0191000 Rorug06G0191100 |
| rosa_samantha | Rh6AG301300 Rh6BG307000 Rh6CG302500 Rh6CG315200 Rh6DG298700 |
| rosa_wichuraiana | Rw6G026000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1718 |
| AarI | CACCTGC | 2 cut(s) | 1202, 3137 |
| Acc16I | TGCGCA | 1 cut(s) | 2105 |
| Acc36I | ACCTGC | 2 cut(s) | 1202, 3137 |
| Acc65I | GGTACC | 1 cut(s) | 1365 |
| AccB1I | GGYRCC | 2 cut(s) | 1365, 2946 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1518, 2165 |
| AccBSI | CCGCTC | 1 cut(s) | 2512 |
| AccI | GTMKAC | 3 cut(s) | 2717, 2825, 3182 |
| AccII | CGCG | 5 cut(s) | 454, 693, 737, 1958, 2568 |
| AccIII | TCCGGA | 2 cut(s) | 527, 1132 |
| AcoI | YGGCCR | 1 cut(s) | 2149 |
| AcsI | RAATTY | 7 cut(s) | 654, 906, 1128, 2077, 2369, 2601, 3173 |
| AcuI | CTGAAG | 2 cut(s) | 2772, 3447 |
| AcyI | GRCGYC | 1 cut(s) | 2958 |
| AfaI | GTAC | 8 cut(s) | 96, 931, 1139, 1367, 1707, 2820, 3451, 3478 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 443, 719, 740, 1116, 1117, 1518, 2165, 2323, 3239 |
| AflIII | ACRYGT | 2 cut(s) | 1102, 1981 |
| AgeI | ACCGGT | 1 cut(s) | 366 |
| AjnI | CCWGG | 5 cut(s) | 354, 1254, 1783, 2499, 2876 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 3182, 3214 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 931, 963 |
| Alw21I | GWGCWC | 2 cut(s) | 1732, 3154 |
| Alw26I | GTCTC | 5 cut(s) | 565, 1483, 1902, 2664, 2924 |
| Alw44I | GTGCAC | 2 cut(s) | 1728, 3150 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 608, 806, 1261, 2867 |
| Ama87I | CYCGRG | 5 cut(s) | 62, 717, 1369, 1404, 3045 |
| Aor13HI | TCCGGA | 2 cut(s) | 527, 1132 |
| AoxI | GGCC | 5 cut(s) | 694, 710, 721, 2149, 3229 |
| ApaLI | GTGCAC | 2 cut(s) | 1728, 3150 |
| ApeKI | GCWGC | 6 cut(s) | 602, 806, 1960, 1995, 3062, 3499 |
| ApoI | RAATTY | 7 cut(s) | 654, 906, 1128, 2077, 2369, 2601, 3173 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2923, 2955 |
| AsiGI | ACCGGT | 1 cut(s) | 366 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 642, 2289 |
| Asp718I | GGTACC | 1 cut(s) | 1365 |
| AspS9I | GGNCC | 7 cut(s) | 710, 721, 1177, 1761, 2870, 3230, 3386 |
| AsuHPI | GGTGA | 7 cut(s) | 137, 305, 320, 1854, 2467, 2554, 2927 |
| AsuII | TTCGAA | 1 cut(s) | 3094 |
| AvaI | CYCGRG | 5 cut(s) | 62, 717, 1369, 1404, 3045 |
| AvaII | GGWCC | 4 cut(s) | 1177, 1761, 2870, 3386 |
| BaeGI | GKGCMC | 2 cut(s) | 1732, 3154 |
| BanI | GGYRCC | 2 cut(s) | 1365, 2946 |
| BanII | GRGCYC | 1 cut(s) | 3268 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3469, 3501 |
| BbsI | GAAGAC | 3 cut(s) | 15, 439, 1979 |
| Bbv12I | GWGCWC | 2 cut(s) | 1732, 3154 |
| BbvI | GCAGC | 6 cut(s) | 614, 793, 1972, 2007, 3074, 3511 |
| BceAI | ACGGC | 6 cut(s) | 66, 233, 708, 1906, 3084, 3256 |
| BciT130I | CCWGG | 5 cut(s) | 356, 1256, 1785, 2501, 2878 |
| BciVI | GTATCC | 3 cut(s) | 1107, 1885, 2961 |
| BclI | TGATCA | 4 cut(s) | 1530, 1914, 2457, 2559 |
| BcoDI | GTCTC | 5 cut(s) | 565, 1483, 1902, 2664, 2924 |
| BfaI | CTAG | 9 cut(s) | 780, 920, 1112, 1565, 1682, 2040, 2174, 2667, 3393 |
| BfmI | CTRYAG | 1 cut(s) | 609 |
| BfuAI | ACCTGC | 2 cut(s) | 1202, 3137 |
| BfuI | GTATCC | 3 cut(s) | 1107, 1885, 2961 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3105 |
| BglII | AGATCT | 3 cut(s) | 2015, 2109, 3444 |
| BisI | GCNGC | 9 cut(s) | 54, 603, 694, 807, 1961, 1996, 2149, 3063, 3500 |
| BlsI | GCNGC | 9 cut(s) | 55, 604, 695, 808, 1962, 1997, 2150, 3064, 3501 |
| Bme1390I | CCNGG | 5 cut(s) | 356, 1256, 1785, 2501, 2878 |
| Bme18I | GGWCC | 4 cut(s) | 1177, 1761, 2870, 3386 |
| BmeT110I | CYCGRG | 5 cut(s) | 62, 717, 1369, 1404, 3045 |
| BmgT120I | GGNCC | 7 cut(s) | 710, 721, 1177, 1761, 2870, 3230, 3386 |
| BmrFI | CCNGG | 5 cut(s) | 356, 1256, 1785, 2501, 2878 |
| BmrI | ACTGGG | 3 cut(s) | 1316, 3138, 3190 |
| BmsI | GCATC | 8 cut(s) | 7, 235, 577, 589, 614, 2746, 3078, 3361 |
| BmuI | ACTGGG | 3 cut(s) | 1316, 3138, 3190 |
| BpiI | GAAGAC | 3 cut(s) | 15, 439, 1979 |
| BpmI | CTGGAG | 2 cut(s) | 329, 3593 |
| Bpu10I | CCTNAGC | 1 cut(s) | 890 |
| Bpu14I | TTCGAA | 1 cut(s) | 3094 |
| BpuEI | CTTGAG | 5 cut(s) | 182, 422, 795, 1028, 2153 |
| Bsa29I | ATCGAT | 1 cut(s) | 3618 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1095 |
| BsaHI | GRCGYC | 1 cut(s) | 2958 |
| BsaI | GGTCTC | 2 cut(s) | 565, 1483 |
| BsaJI | CCNNGG | 9 cut(s) | 63, 354, 441, 735, 1270, 1783, 2566, 2962, 3166 |
| BsaWI | WCCGGW | 4 cut(s) | 366, 527, 1132, 2316 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 443, 719, 740, 1116, 1117, 1518, 2165, 2323, 3239 |
| Bse118I | RCCGGY | 1 cut(s) | 366 |
| Bse3DI | GCAATG | 3 cut(s) | 115, 1198, 1277 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1095 |
| BseAI | TCCGGA | 2 cut(s) | 527, 1132 |
| BseBI | CCWGG | 5 cut(s) | 356, 1256, 1785, 2501, 2878 |
| BseCI | ATCGAT | 1 cut(s) | 3618 |
| BseDI | CCNNGG | 9 cut(s) | 63, 354, 441, 735, 1270, 1783, 2566, 2962, 3166 |
| BseJI | GATNNNNATC | 1 cut(s) | 1095 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 443, 719, 740, 1116, 1117, 1518, 2165, 2323, 3239 |
| BseMI | GCAATG | 3 cut(s) | 115, 1198, 1277 |
| BseMII | CTCAG | 6 cut(s) | 1809, 2037, 2276, 2684, 2819, 2874 |
| BseRI | GAGGAG | 4 cut(s) | 161, 164, 1919, 2594 |
| BseSI | GKGCMC | 2 cut(s) | 1732, 3154 |
| BseXI | GCAGC | 6 cut(s) | 614, 793, 1972, 2007, 3074, 3511 |
| BseYI | CCCAGC | 5 cut(s) | 820, 1043, 3233, 3260, 3272 |
| BsgI | GTGCAG | 3 cut(s) | 477, 2795, 3518 |
| Bsh1236I | CGCG | 5 cut(s) | 454, 693, 737, 1958, 2568 |
| Bsh1285I | CGRYCG | 1 cut(s) | 3622 |
| BshFI | GGCC | 5 cut(s) | 696, 712, 723, 2151, 3231 |
| BshNI | GGYRCC | 2 cut(s) | 1365, 2946 |
| BshTI | ACCGGT | 1 cut(s) | 366 |
| BshVI | ATCGAT | 1 cut(s) | 3618 |
| BsiEI | CGRYCG | 1 cut(s) | 3622 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1732, 3154 |
| BsiHKCI | CYCGRG | 5 cut(s) | 62, 717, 1369, 1404, 3045 |
| BsiSI | CCGG | 7 cut(s) | 367, 528, 977, 1133, 1933, 2317, 3342 |
| BslFI | GGGAC | 2 cut(s) | 92, 3101 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 443, 719, 740, 1116, 1117, 1518, 2165, 2323, 3239 |
| BsmAI | GTCTC | 5 cut(s) | 565, 1483, 1902, 2664, 2924 |
| BsmFI | GGGAC | 2 cut(s) | 92, 3101 |
| BsmI | GAATGC | 2 cut(s) | 1861, 3007 |
| BsnI | GGCC | 5 cut(s) | 696, 712, 723, 2151, 3231 |
| Bso31I | GGTCTC | 2 cut(s) | 565, 1483 |
| BsoBI | CYCGRG | 5 cut(s) | 62, 717, 1369, 1404, 3045 |
| Bsp119I | TTCGAA | 1 cut(s) | 3094 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1732, 3154, 3268 |
| Bsp13I | TCCGGA | 2 cut(s) | 527, 1132 |
| Bsp1407I | TGTACA | 1 cut(s) | 3449 |
| BspANI | GGCC | 5 cut(s) | 696, 712, 723, 2151, 3231 |
| BspCNI | CTCAG | 6 cut(s) | 1810, 2038, 2275, 2685, 2818, 2873 |
| BspDI | ATCGAT | 1 cut(s) | 3618 |
| BspEI | TCCGGA | 2 cut(s) | 527, 1132 |
| BspFNI | CGCG | 5 cut(s) | 454, 693, 737, 1958, 2568 |
| BspHI | TCATGA | 2 cut(s) | 1393, 2997 |
| BspMAI | CTGCAG | 1 cut(s) | 613 |
| BspMI | ACCTGC | 2 cut(s) | 1202, 3137 |
| BspT104I | TTCGAA | 1 cut(s) | 3094 |
| BspT107I | GGYRCC | 2 cut(s) | 1365, 2946 |
| BspTNI | GGTCTC | 2 cut(s) | 565, 1483 |
| BsrBI | CCGCTC | 1 cut(s) | 2512 |
| BsrDI | GCAATG | 3 cut(s) | 115, 1198, 1277 |
| BsrFI | RCCGGY | 1 cut(s) | 366 |
| BsrGI | TGTACA | 1 cut(s) | 3449 |
| BssAI | RCCGGY | 1 cut(s) | 366 |
| BssECI | CCNNGG | 9 cut(s) | 63, 354, 441, 735, 1270, 1783, 2566, 2962, 3166 |
| BssNI | GRCGYC | 1 cut(s) | 2958 |
| BssT1I | CCWWGG | 2 cut(s) | 441, 2962 |
| Bst2UI | CCWGG | 5 cut(s) | 356, 1256, 1785, 2501, 2878 |
| Bst4CI | ACNGT | 9 cut(s) | 35, 262, 559, 1478, 1538, 1705, 1758, 2823, 2915 |
| Bst6I | CTCTTC | 3 cut(s) | 282, 2922, 3009 |
| BstACI | GRCGYC | 1 cut(s) | 2958 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 608, 2036, 2112 |
| BstAUI | TGTACA | 1 cut(s) | 3449 |
| BstBI | TTCGAA | 1 cut(s) | 3094 |
| BstC8I | GCNNGC | 7 cut(s) | 351, 492, 613, 817, 1413, 2514, 3039 |
| BstDEI | CTNAG | 9 cut(s) | 890, 1818, 1968, 2046, 2262, 2693, 2805, 2860, 3409 |
| BstDSI | CCRYGG | 3 cut(s) | 735, 2566, 3166 |
| BstEII | GGTNACC | 1 cut(s) | 190 |
| BstFNI | CGCG | 5 cut(s) | 454, 693, 737, 1958, 2568 |
| BstMAI | GTCTC | 5 cut(s) | 565, 1483, 1902, 2664, 2924 |
| BstMCI | CGRYCG | 1 cut(s) | 3622 |
| BstNI | CCWGG | 5 cut(s) | 356, 1256, 1785, 2501, 2878 |
| BstNSI | RCATGY | 3 cut(s) | 353, 1106, 1985 |
| BstPI | GGTNACC | 1 cut(s) | 190 |
| BstSCI | CCNGG | 5 cut(s) | 354, 1254, 1783, 2499, 2876 |
| BstSFI | CTRYAG | 1 cut(s) | 609 |
| BstSLI | GKGCMC | 2 cut(s) | 1732, 3154 |
| BstUI | CGCG | 5 cut(s) | 454, 693, 737, 1958, 2568 |
| BstV1I | GCAGC | 6 cut(s) | 614, 793, 1972, 2007, 3074, 3511 |
| BstV2I | GAAGAC | 3 cut(s) | 15, 439, 1979 |
| BstX2I | RGATCY | 6 cut(s) | 2015, 2109, 2655, 2680, 3444, 3529 |
| BstYI | RGATCY | 6 cut(s) | 2015, 2109, 2655, 2680, 3444, 3529 |
| Bsu15I | ATCGAT | 1 cut(s) | 3618 |
| BsuI | GTATCC | 3 cut(s) | 1107, 1885, 2961 |
| BsuRI | GGCC | 5 cut(s) | 696, 712, 723, 2151, 3231 |
| BsuTUI | ATCGAT | 1 cut(s) | 3618 |
| BtgI | CCRYGG | 3 cut(s) | 735, 2566, 3166 |
| BtsI | GCAGTG | 2 cut(s) | 1878, 2143 |
| BtsIMutI | CAGTG | 8 cut(s) | 202, 258, 778, 1187, 1483, 1878, 2001, 2143 |
| BveI | ACCTGC | 2 cut(s) | 1202, 3137 |
| Cac8I | GCNNGC | 7 cut(s) | 351, 492, 613, 817, 1413, 2514, 3039 |
| CaiI | CAGNNNCTG | 4 cut(s) | 608, 806, 1261, 2867 |
| CciI | TCATGA | 2 cut(s) | 1393, 2997 |
| Cfr10I | RCCGGY | 1 cut(s) | 366 |
| Cfr13I | GGNCC | 7 cut(s) | 710, 721, 1177, 1761, 2870, 3230, 3386 |
| Cfr42I | CCGCGG | 2 cut(s) | 738, 2569 |
| ClaI | ATCGAT | 1 cut(s) | 3618 |
| CseI | GACGC | 3 cut(s) | 956, 1964, 2966 |
| Csp6I | GTAC | 8 cut(s) | 95, 930, 1138, 1366, 1706, 2819, 3450, 3477 |
| CspAI | ACCGGT | 1 cut(s) | 366 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2397, 2432 |
| CviQI | GTAC | 8 cut(s) | 95, 930, 1138, 1366, 1706, 2819, 3450, 3477 |
| DdeI | CTNAG | 9 cut(s) | 890, 1818, 1968, 2046, 2262, 2693, 2805, 2860, 3409 |
| DraI | TTTAAA | 1 cut(s) | 2662 |
| EaeI | YGGCCR | 1 cut(s) | 2149 |
| Eam1104I | CTCTTC | 3 cut(s) | 282, 2922, 3009 |
| EarI | CTCTTC | 3 cut(s) | 282, 2922, 3009 |
| EciI | GGCGGA | 2 cut(s) | 3429, 3486 |
| Eco130I | CCWWGG | 2 cut(s) | 441, 2962 |
| Eco24I | GRGCYC | 1 cut(s) | 3268 |
| Eco31I | GGTCTC | 2 cut(s) | 565, 1483 |
| Eco32I | GATATC | 2 cut(s) | 70, 525 |
| Eco47I | GGWCC | 4 cut(s) | 1177, 1761, 2870, 3386 |
| Eco57I | CTGAAG | 2 cut(s) | 2772, 3447 |
| Eco88I | CYCGRG | 5 cut(s) | 62, 717, 1369, 1404, 3045 |
| Eco91I | GGTNACC | 1 cut(s) | 190 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3230 |
| EcoO65I | GGTNACC | 1 cut(s) | 190 |
| EcoRI | GAATTC | 1 cut(s) | 2077 |
| EcoRII | CCWGG | 5 cut(s) | 354, 1254, 1783, 2499, 2876 |
| EcoRV | GATATC | 2 cut(s) | 70, 525 |
| EcoT14I | CCWWGG | 2 cut(s) | 441, 2962 |
| EcoT38I | GRGCYC | 1 cut(s) | 3268 |
| ErhI | CCWWGG | 2 cut(s) | 441, 2962 |
| FaqI | GGGAC | 2 cut(s) | 92, 3101 |
| FauI | CCCGC | 7 cut(s) | 271, 316, 742, 2505, 2529, 2573, 2649 |
| FauNDI | CATATG | 1 cut(s) | 1293 |
| FbaI | TGATCA | 4 cut(s) | 1530, 1914, 2457, 2559 |
| FblI | GTMKAC | 3 cut(s) | 2717, 2825, 3182 |
| Fnu4HI | GCNGC | 9 cut(s) | 54, 603, 694, 807, 1961, 1996, 2149, 3063, 3500 |
| FriOI | GRGCYC | 1 cut(s) | 3268 |
| Fsp4HI | GCNGC | 9 cut(s) | 54, 603, 694, 807, 1961, 1996, 2149, 3063, 3500 |
| FspBI | CTAG | 9 cut(s) | 780, 920, 1112, 1565, 1682, 2040, 2174, 2667, 3393 |
| FspI | TGCGCA | 1 cut(s) | 2105 |
| GluI | GCNGC | 9 cut(s) | 54, 603, 694, 807, 1961, 1996, 2149, 3063, 3500 |
| GsaI | CCCAGC | 5 cut(s) | 824, 1047, 3237, 3264, 3276 |
| GsuI | CTGGAG | 2 cut(s) | 329, 3593 |
| HaeIII | GGCC | 5 cut(s) | 696, 712, 723, 2151, 3231 |
| HapII | CCGG | 7 cut(s) | 367, 528, 977, 1133, 1933, 2317, 3342 |
| HgaI | GACGC | 3 cut(s) | 956, 1964, 2966 |
| Hin1I | GRCGYC | 1 cut(s) | 2958 |
| HindIII | AAGCTT | 3 cut(s) | 857, 3026, 3039 |
| HpaII | CCGG | 7 cut(s) | 367, 528, 977, 1133, 1933, 2317, 3342 |
| HphI | GGTGA | 7 cut(s) | 137, 305, 320, 1854, 2467, 2554, 2927 |
| Hpy166II | GTNNAC | 8 cut(s) | 258, 932, 1730, 1954, 2718, 2826, 3152, 3183 |
| Hpy8I | GTNNAC | 8 cut(s) | 258, 932, 1730, 1954, 2718, 2826, 3152, 3183 |
| Hpy99I | CGWCG | 2 cut(s) | 52, 2768 |
| HpyCH4III | ACNGT | 9 cut(s) | 35, 262, 559, 1478, 1538, 1705, 1758, 2823, 2915 |
| HpyCH4IV | ACGT | 3 cut(s) | 1614, 2179, 2763 |
| HpyF3I | CTNAG | 9 cut(s) | 890, 1818, 1968, 2046, 2262, 2693, 2805, 2860, 3409 |
| HpySE526I | ACGT | 3 cut(s) | 1614, 2179, 2763 |
| Hsp92I | GRCGYC | 1 cut(s) | 2958 |
| Kpn2I | TCCGGA | 2 cut(s) | 527, 1132 |
| KpnI | GGTACC | 1 cut(s) | 1369 |
| Ksp22I | TGATCA | 4 cut(s) | 1530, 1914, 2457, 2559 |
| KspI | CCGCGG | 2 cut(s) | 738, 2569 |
| LmnI | GCTCC | 5 cut(s) | 409, 1384, 1408, 3271, 3590 |
| Lsp1109I | GCAGC | 6 cut(s) | 614, 793, 1972, 2007, 3074, 3511 |
| LweI | GCATC | 8 cut(s) | 7, 235, 577, 589, 614, 2746, 3078, 3361 |
| MaeI | CTAG | 9 cut(s) | 780, 920, 1112, 1565, 1682, 2040, 2174, 2667, 3393 |
| MaeII | ACGT | 3 cut(s) | 1614, 2179, 2763 |
| MbiI | CCGCTC | 1 cut(s) | 2512 |
| MflI | RGATCY | 6 cut(s) | 2015, 2109, 2655, 2680, 3444, 3529 |
| MhlI | GDGCHC | 3 cut(s) | 1732, 3154, 3268 |
| MlyI | GAGTC | 1 cut(s) | 263 |
| MmeI | TCCRAC | 6 cut(s) | 112, 576, 1054, 1530, 3364, 3484 |
| MroI | TCCGGA | 2 cut(s) | 527, 1132 |
| MroXI | GAANNNNTTC | 2 cut(s) | 642, 2289 |
| MslI | CAYNNNNRTG | 2 cut(s) | 102, 1888 |
| MspA1I | CMGCKG | 4 cut(s) | 737, 1047, 2568, 3161 |
| MspI | CCGG | 7 cut(s) | 367, 528, 977, 1133, 1933, 2317, 3342 |
| MspR9I | CCNGG | 5 cut(s) | 356, 1256, 1785, 2501, 2878 |
| Mva1269I | GAATGC | 2 cut(s) | 1861, 3007 |
| MvaI | CCWGG | 5 cut(s) | 356, 1256, 1785, 2501, 2878 |
| MvnI | CGCG | 5 cut(s) | 454, 693, 737, 1958, 2568 |
| NdeI | CATATG | 1 cut(s) | 1293 |
| NmuCI | GTSAC | 5 cut(s) | 455, 792, 2909, 3081, 3401 |
| NsbI | TGCGCA | 1 cut(s) | 2105 |
| NspI | RCATGY | 3 cut(s) | 353, 1106, 1985 |
| NspV | TTCGAA | 1 cut(s) | 3094 |
| PaeI | GCATGC | 1 cut(s) | 353 |
| PagI | TCATGA | 2 cut(s) | 1393, 2997 |
| PaqCI | CACCTGC | 2 cut(s) | 1202, 3137 |
| PciI | ACATGT | 2 cut(s) | 1102, 1981 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3091 |
| PctI | GAATGC | 2 cut(s) | 1861, 3007 |
| PdmI | GAANNNNTTC | 2 cut(s) | 642, 2289 |
| PflFI | GACNNNGTC | 1 cut(s) | 461 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1518, 2165 |
| PfoI | TCCNGGA | 1 cut(s) | 2876 |
| PinAI | ACCGGT | 1 cut(s) | 366 |
| PkrI | GCNGC | 9 cut(s) | 55, 604, 695, 808, 1962, 1997, 2150, 3064, 3501 |
| Ple19I | CGATCG | 1 cut(s) | 3622 |
| PleI | GAGTC | 1 cut(s) | 262 |
| PpsI | GAGTC | 1 cut(s) | 262 |
| PscI | ACATGT | 2 cut(s) | 1102, 1981 |
| PsiI | TTATAA | 1 cut(s) | 1718 |
| Psp6I | CCWGG | 5 cut(s) | 354, 1254, 1783, 2499, 2876 |
| PspEI | GGTNACC | 1 cut(s) | 190 |
| PspFI | CCCAGC | 5 cut(s) | 820, 1043, 3233, 3260, 3272 |
| PspGI | CCWGG | 5 cut(s) | 354, 1254, 1783, 2499, 2876 |
| PspPI | GGNCC | 7 cut(s) | 710, 721, 1177, 1761, 2870, 3230, 3386 |
| PstI | CTGCAG | 1 cut(s) | 613 |
| PstNI | CAGNNNCTG | 4 cut(s) | 608, 806, 1261, 2867 |
| PsuI | RGATCY | 6 cut(s) | 2015, 2109, 2655, 2680, 3444, 3529 |
| PsyI | GACNNNGTC | 1 cut(s) | 461 |
| PvuI | CGATCG | 1 cut(s) | 3622 |
| PvuII | CAGCTG | 2 cut(s) | 1047, 3161 |
| RsaI | GTAC | 8 cut(s) | 96, 931, 1139, 1367, 1707, 2820, 3451, 3478 |
| RsaNI | GTAC | 8 cut(s) | 95, 930, 1138, 1366, 1706, 2819, 3450, 3477 |
| RseI | CAYNNNNRTG | 2 cut(s) | 102, 1888 |
| SacII | CCGCGG | 2 cut(s) | 738, 2569 |
| SatI | GCNGC | 9 cut(s) | 54, 603, 694, 807, 1961, 1996, 2149, 3063, 3500 |
| Sau96I | GGNCC | 7 cut(s) | 710, 721, 1177, 1761, 2870, 3230, 3386 |
| SchI | GAGTC | 1 cut(s) | 263 |
| ScrFI | CCNGG | 5 cut(s) | 356, 1256, 1785, 2501, 2878 |
| SduI | GDGCHC | 3 cut(s) | 1732, 3154, 3268 |
| SfaNI | GCATC | 8 cut(s) | 7, 235, 577, 589, 614, 2746, 3078, 3361 |
| SfcI | CTRYAG | 1 cut(s) | 609 |
| Sfr303I | CCGCGG | 2 cut(s) | 738, 2569 |
| SfuI | TTCGAA | 1 cut(s) | 3094 |
| SgrBI | CCGCGG | 2 cut(s) | 738, 2569 |
| SinI | GGWCC | 4 cut(s) | 1177, 1761, 2870, 3386 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 102, 1888 |
| SmlI | CTYRAG | 5 cut(s) | 161, 401, 810, 1007, 2132 |
| SmoI | CTYRAG | 5 cut(s) | 161, 401, 810, 1007, 2132 |
| SphI | GCATGC | 1 cut(s) | 353 |
| SspI | AATATT | 1 cut(s) | 2938 |
| SspMI | CTAG | 9 cut(s) | 780, 920, 1112, 1565, 1682, 2040, 2174, 2667, 3393 |
| StyD4I | CCNGG | 5 cut(s) | 354, 1254, 1783, 2499, 2876 |
| StyI | CCWWGG | 2 cut(s) | 441, 2962 |
| TaaI | ACNGT | 9 cut(s) | 35, 262, 559, 1478, 1538, 1705, 1758, 2823, 2915 |
| TaiI | ACGT | 3 cut(s) | 1617, 2182, 2766 |
| TaqI | TCGA | 4 cut(s) | 72, 509, 3094, 3618 |
| TaqII | GACCGA | 1 cut(s) | 2729 |
| TatI | WGTACW | 3 cut(s) | 1137, 1705, 3449 |
| TauI | GCSGC | 3 cut(s) | 56, 696, 2151 |
| TscAI | CASTG | 8 cut(s) | 202, 265, 778, 1187, 1483, 1885, 2008, 2150 |
| TseFI | GTSAC | 5 cut(s) | 455, 792, 2909, 3081, 3401 |
| TseI | GCWGC | 6 cut(s) | 602, 806, 1960, 1995, 3062, 3499 |
| Tsp45I | GTSAC | 5 cut(s) | 455, 792, 2909, 3081, 3401 |
| TspGWI | ACGGA | 5 cut(s) | 1577, 3100, 3155, 3494, 3603 |
| TspRI | CASTG | 8 cut(s) | 202, 265, 778, 1187, 1483, 1885, 2008, 2150 |
| Tth111I | GACNNNGTC | 1 cut(s) | 461 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1518, 2165 |
| VneI | GTGCAC | 2 cut(s) | 1728, 3150 |
| VpaK11BI | GGWCC | 4 cut(s) | 1177, 1761, 2870, 3386 |
| XapI | RAATTY | 7 cut(s) | 654, 906, 1128, 2077, 2369, 2601, 3173 |
| XbaI | TCTAGA | 1 cut(s) | 2173 |
| XceI | RCATGY | 3 cut(s) | 353, 1106, 1985 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1211, 2836 |
| XmiI | GTMKAC | 3 cut(s) | 2717, 2825, 3182 |
| XmnI | GAANNNNTTC | 2 cut(s) | 642, 2289 |
| XspI | CTAG | 9 cut(s) | 780, 920, 1112, 1565, 1682, 2040, 2174, 2667, 3393 |