Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0003906

Physical Location & Seq

Genomic Coordinates Reverse (-)

30618071 .. 30638495

Gene Structure 20425 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0191000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGTCCTTCCAATACTTGCAATCTTACATTGCGCCTCTTTTCATGAATCCTCCTGAAGTTCATGCTAATGCAGCAGTAACACTTTCTGCTATAACTCGAAATGCCCCATCAGCCCTGCCACCAAGCTTTCTAGCCCAAGGTTTGCAGTTCGTCACAAGGATATTTGATCATGCATTGGAAGATTTGCCTTCAAAGTTTGGCCTTGTGAACTCACTTTCTGTCTGCATATCTTTGTTGGATCCCCAAAGATCAGCAGCTTCTTCACCCTTGTTTCATTCCTTTTGGAGCCAACATATGTATGAGTCTCCAATCCCTATTAATCCAGACACTGTCAGTGCAATGCTCCCAAAACTCGTGCAGTTCCTCTCCCTGCTGGTTCAAGCCGAAGTCCATTACTATGATTTTGTTGTAAGGGAGAAAAATTACACGAGGCTGTGTGAGACAAAGAGCATTTTAGTTGTGAATGATAGTTTCCCAGGACCGGAGATACGTGTTCACAAAGGTGATACAGTTTATGTCAACGTGCATAACCAAGGAGATTATGCACTCACCATTCACTGGCATGGGATAAAGCAACCACGAAATCCATGGTCAGATGGTCCATCTTACATCACACAATGTCCAATCCCACCTGGAACAAACTTCACCCATGAAGTATTATTGTCCATAGAAGAAGGAACTGTATGGTGGCATGCACATAGTGATTGGACTAGAGCTACTGTTCATGGTGCTTTTGTTATCTTGCCTGCTATTGGAACCACATTCCCATTTCCGCAACCTGATGAAGACGAAGTTCTTGTAATTGCATCTTGGTACACAGGAGATATAAAAGAACTTACTGATGAGTCTATACAAAATGGTACTGACTTACCCCATTCAGATGCTTACACATTAAATGGGCAGCCAGGAGATTTTTGTGCATGCTCCTATGGAACAGCGTACCGTCGTATAGTGGATTACGGCAAGACATATCTTCTTCGTATAGTCAACGGAAACATGAATGCAGAACACTTCTTTGCCGTTGCAGAGCATAGTCTCACTGTGGTTGGACTAGATGGAGCCTATATAAAACCCATAAACACTGCCTACATAGTCATAAGTCCGGGACAAACGATGGATGTCTTGCTGGTAGCAAACCAGTCTCTTGGCCAATATTATATGGCTATTAGACAATACTCAAGTGAGGACCCTGCAGTCACTAGATTTGACCATGCCAATGTTACTGCAATCCTTGAATACAGAGGCGACTATACATATGAGACATCTCCTGTATTTCCATCTACTCTTCCTATGTACTTGGACAAAGCAGCAGCACTCAACTTCACATACCAACTTAGAAGCTTGGCTACTCCAGAGTACCCTGTAAATGTTCCACTCGACATCACTACTAGAATGTATATTACGGCGTCGATGAGTGTTCTTCCTTGTGACCATGCAGGCTGTGAAGTAACTGAGAATATTGCTTCAAGCCTAAATAATGTTAGTTGGGTCGATACAAAACCAACTACAAATGTCTTGGAAGCCTACTACAGGAACATAAGCGGGGCTTATGAATCAAATTTCCCAGACCAGCTGCCTTTGTTTTATAATTTTACAGCAGATTCTGTCCCCGACTATTATGATTACACAGCACAAGGGACAAAGGTGAAAGTGTTGAACTATAATGAATCGGTTGAAATTGTGTTCCAAGGGACTAATGTGATGGACGGTTCTGTCAATCATCCAATGCATATGCATGGATATAGCTTTTATGTGGTTGGATATGGTTTTGGAAATTTTGACAATGAGACTGATCCCAAGGGGTATAATTTGGTAGATCCTCCTGAAGTAACTACCTTTGGAGTTCCCAAAAGAGGATGGTTAGCAATCAGATTCAAAGCAACTAATCCTGGGGTGTGGTTTTGGCATTGTCATTTCGAGAGACACTTAACTTGGGGCATGAACACTGCTTTTATAGTGAAAAATGGGGACACTTCGGAGACTAGCATTCGCGGGCCACCAACTTACATGCCCCCATGTATTATTCCATTGAATTCTCGTGTCAACAGCTATGGTGAATTTATTGAAGAGAAAAGAGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001207 GO:0001208 GO:0003674 GO:0003824 GO:0006139 GO:0006259 GO:0006281 GO:0006283 GO:0006289 GO:0006325 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008094 GO:0008150 GO:0008152 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009987 GO:0010212 GO:0010332 GO:0010468 GO:0010556 GO:0010767 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033554 GO:0034641 GO:0034644 GO:0034728 GO:0042623 GO:0043170 GO:0043618 GO:0043620 GO:0043933 GO:0044237 GO:0044238 GO:0044260 GO:0046483 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0104004 GO:1901360 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03420 map03420

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

693

Amino Acids

77.78

Weight (kDa)

5.17

Isoelectric Point (pI)

38.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cu-oxidase_3	PF07732	137 - 249	5.9e-39	Multicopper oxidase
Cu-oxidase	PF00394	263 - 415	5.8e-34	Multicopper oxidase
Cu-oxidase_2	PF07731	523 - 656	5.2e-40	Multicopper oxidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003906)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18760 AT2G18760 AT2G18760 AT2G18760 AT2G18760 AT2G18760 AT2G18760
fragaria_vesca	FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 FvH4_2g21200
malus_domestica	MD05G1194600.v1.1
prunus_persica	Prupe.8G221300_v2.0.a1
pyrus_communis	pycom05g18190 pycom10g15720
rosa_chinensis	RchiOBHm_Chr6g0287701
rosa_laevigata	RLG00000012472
rosa_multiflora	Rmu_sc0003335.1_g000002 Rmu_sc0037270.1_g000001 Rmu_sc0037271.1_g000001
rosa_roxburghii	Rroxscaffold_7G00181080 Rroxscaffold_7G00181270
rosa_rugosa	Rorug06G0190800 Rorug06G0190900 Rorug06G0191000 Rorug06G0191100
rosa_samantha	Rh6AG301300 Rh6BG307000 Rh6CG302500 Rh6CG315200 Rh6DG298700
rosa_wichuraiana	Rw6G026000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1587
AasI	GACNNNNNNGTC	2 cut(s)	1193, 1712
AccB7I	CCANNNNNTGG	1 cut(s)	558
AccII	CGCG	1 cut(s)	1992
AciI	CCGC	3 cut(s)	773, 1542, 1992
AclWI	GGATC	4 cut(s)	233, 246, 1787, 1811
AcoI	YGGCCR	1 cut(s)	1147
AcsI	RAATTY	4 cut(s)	1558, 1774, 2032, 2057
AcuI	CTGAAG	2 cut(s)	75, 1845
AcyI	GRCGYC	1 cut(s)	1406
AdeI	CACNNNGTG	1 cut(s)	701
AfaI	GTAC	5 cut(s)	815, 862, 941, 1295, 1358
AfiI	CCNNNNNNNGG	5 cut(s)	481, 558, 752, 1530, 1853
AflIII	ACRYGT	1 cut(s)	490
AgsI	TTSAA	9 cut(s)	192, 380, 1235, 1467, 1657, 1676, 1876, 2032, 2066
AjnI	CCWGG	4 cut(s)	475, 631, 904, 1888
AleI	CACNNNNGTG	1 cut(s)	501
AluBI	AGCT	7 cut(s)	126, 257, 716, 1341, 1573, 1746, 2049
AluI	AGCT	7 cut(s)	126, 257, 716, 1341, 1573, 1746, 2049
Alw26I	GTCTC	8 cut(s)	309, 434, 1040, 1146, 1253, 1781, 1915, 1973
AlwI	GGATC	4 cut(s)	233, 246, 1787, 1811
AlwNI	CAGNNNCTG	2 cut(s)	329, 1604
AoxI	GGCC	3 cut(s)	199, 1147, 1994
ApeKI	GCWGC	6 cut(s)	71, 254, 901, 1307, 1310, 1573
ApoI	RAATTY	4 cut(s)	1558, 1774, 2032, 2057
AseI	ATTAAT	1 cut(s)	318
AspLEI	GCGC	1 cut(s)	34
AspS9I	GGNCC	4 cut(s)	479, 599, 1186, 1994
AsuC2I	CCSGG	1 cut(s)	1104
AsuHPI	GGTGA	6 cut(s)	255, 515, 541, 637, 1657, 2066
AvaII	GGWCC	3 cut(s)	479, 599, 1186
BalI	TGGCCA	1 cut(s)	1149
BamHI	GGATCC	1 cut(s)	238
BarI	GAAGNNNNNNTAC	2 cut(s)	1330, 1362
BauI	CACGAG	3 cut(s)	353, 427, 2037
BbsI	GAAGAC	1 cut(s)	792
BbvI	GCAGC	6 cut(s)	83, 266, 913, 1319, 1322, 1560
BccI	CCATC	8 cut(s)	115, 590, 610, 1049, 1108, 1285, 1696, 1851
BceAI	ACGGC	3 cut(s)	976, 1004, 1419
BciT130I	CCWGG	4 cut(s)	477, 633, 906, 1890
BclI	TGATCA	1 cut(s)	166
BcnI	CCSGG	1 cut(s)	1104
BcoDI	GTCTC	8 cut(s)	309, 434, 1040, 1146, 1253, 1781, 1915, 1973
BfaI	CTAG	6 cut(s)	131, 711, 1052, 1200, 1389, 1983
BfmI	CTRYAG	2 cut(s)	1191, 1528
BisI	GCNGC	6 cut(s)	72, 255, 902, 1308, 1311, 1574
BlsI	GCNGC	6 cut(s)	73, 256, 903, 1309, 1312, 1575
Bme1390I	CCNGG	5 cut(s)	477, 633, 906, 1104, 1890
Bme18I	GGWCC	3 cut(s)	479, 599, 1186
BmgT120I	GGNCC	4 cut(s)	479, 599, 1186, 1994
BmiI	GGNNCC	5 cut(s)	240, 287, 757, 1060, 1188
BmrFI	CCNGG	5 cut(s)	477, 633, 906, 1104, 1890
BmsI	GCATC	2 cut(s)	815, 871
BpiI	GAAGAC	1 cut(s)	792
BpmI	CTGGAG	1 cut(s)	1335
BpuEI	CTTGAG	1 cut(s)	1162
BpuMI	CCSGG	1 cut(s)	1104
BsaAI	YACGTR	1 cut(s)	491
BsaHI	GRCGYC	1 cut(s)	1406
BsaJI	CCNNGG	7 cut(s)	136, 475, 532, 587, 1687, 1797, 1889
BsaWI	WCCGGW	1 cut(s)	481
Bsc4I	CCNNNNNNNGG	5 cut(s)	481, 558, 752, 1530, 1853
Bse1I	ACTGG	2 cut(s)	563, 1138
Bse3DI	GCAATG	2 cut(s)	27, 345
BseBI	CCWGG	4 cut(s)	477, 633, 906, 1890
BseDI	CCNNGG	7 cut(s)	136, 475, 532, 587, 1687, 1797, 1889
BseGI	GGATG	3 cut(s)	1123, 1720, 1862
BseLI	CCNNNNNNNGG	5 cut(s)	481, 558, 752, 1530, 1853
BseMI	GCAATG	2 cut(s)	27, 345
BseMII	CTCAG	1 cut(s)	1443
BseNI	ACTGG	2 cut(s)	563, 1138
BseXI	GCAGC	6 cut(s)	83, 266, 913, 1319, 1322, 1560
BsgI	GTGCAG	1 cut(s)	377
Bsh1236I	CGCG	1 cut(s)	1992
BshFI	GGCC	3 cut(s)	201, 1149, 1996
BsiSI	CCGG	2 cut(s)	482, 1103
BslFI	GGGAC	5 cut(s)	1119, 1592, 1651, 1705, 1982
BslI	CCNNNNNNNGG	5 cut(s)	481, 558, 752, 1530, 1853
BsmAI	GTCTC	8 cut(s)	309, 434, 1040, 1146, 1253, 1781, 1915, 1973
BsmFI	GGGAC	5 cut(s)	1119, 1592, 1651, 1705, 1982
BsmI	GAATGC	2 cut(s)	1006, 1986
BsnI	GGCC	3 cut(s)	201, 1149, 1996
Bsp143I	GATC	5 cut(s)	166, 238, 248, 1792, 1816
Bsp19I	CCATGG	1 cut(s)	587
BspACI	CCGC	3 cut(s)	773, 1542, 1992
BspANI	GGCC	3 cut(s)	201, 1149, 1996
BspCNI	CTCAG	1 cut(s)	1444
BspFNI	CGCG	1 cut(s)	1992
BspHI	TCATGA	1 cut(s)	42
BspLI	GGNNCC	5 cut(s)	240, 287, 757, 1060, 1188
BspMAI	CTGCAG	1 cut(s)	1195
BspPI	GGATC	4 cut(s)	233, 246, 1787, 1811
BsrDI	GCAATG	2 cut(s)	27, 345
BsrI	ACTGG	2 cut(s)	563, 1138
BssECI	CCNNGG	7 cut(s)	136, 475, 532, 587, 1687, 1797, 1889
BssMI	GATC	5 cut(s)	166, 238, 248, 1792, 1816
BssNI	GRCGYC	1 cut(s)	1406
BssSI	CACGAG	3 cut(s)	353, 427, 2037
BssT1I	CCWWGG	5 cut(s)	136, 532, 587, 1687, 1797
Bst2BI	CACGAG	3 cut(s)	353, 427, 2037
Bst2UI	CCWGG	4 cut(s)	477, 633, 906, 1890
Bst4CI	ACNGT	7 cut(s)	331, 511, 682, 721, 944, 1042, 1709
Bst6I	CTCTTC	2 cut(s)	1290, 2061
BstACI	GRCGYC	1 cut(s)	1406
BstBAI	YACGTR	1 cut(s)	491
BstC8I	GCNNGC	5 cut(s)	693, 747, 922, 1438, 1994
BstDEI	CTNAG	2 cut(s)	1334, 1452
BstDSI	CCRYGG	1 cut(s)	587
BstENI	CCTNNNNNAGG	1 cut(s)	1528
BstF5I	GGATG	3 cut(s)	1123, 1720, 1862
BstFNI	CGCG	1 cut(s)	1992
BstHHI	GCGC	1 cut(s)	34
BstKTI	GATC	5 cut(s)	169, 241, 251, 1795, 1819
BstMAI	GTCTC	8 cut(s)	309, 434, 1040, 1146, 1253, 1781, 1915, 1973
BstMBI	GATC	5 cut(s)	166, 238, 248, 1792, 1816
BstMWI	GCNNNNNNNGC	2 cut(s)	71, 110
BstNI	CCWGG	4 cut(s)	477, 633, 906, 1890
BstNSI	RCATGY	3 cut(s)	695, 924, 2011
BstSCI	CCNGG	5 cut(s)	475, 631, 904, 1102, 1888
BstSFI	CTRYAG	2 cut(s)	1191, 1528
BstUI	CGCG	1 cut(s)	1992
BstV1I	GCAGC	6 cut(s)	83, 266, 913, 1319, 1322, 1560
BstV2I	GAAGAC	1 cut(s)	792
BstX2I	RGATCY	2 cut(s)	238, 1816
BstXI	CCANNNNNNTGG	1 cut(s)	1145
BstYI	RGATCY	2 cut(s)	238, 1816
BsuRI	GGCC	3 cut(s)	201, 1149, 1996
BtgI	CCRYGG	1 cut(s)	587
BtsCI	GGATG	3 cut(s)	1123, 1720, 1862
BtsI	GCAGTG	2 cut(s)	1080, 1944
BtsIMutI	CAGTG	6 cut(s)	327, 340, 556, 1038, 1080, 1944
Cac8I	GCNNGC	5 cut(s)	693, 747, 922, 1438, 1994
CaiI	CAGNNNCTG	2 cut(s)	329, 1604
CciI	TCATGA	1 cut(s)	42
CfoI	GCGC	1 cut(s)	34
Cfr13I	GGNCC	4 cut(s)	479, 599, 1186, 1994
CseI	GACGC	1 cut(s)	1395
Csp6I	GTAC	5 cut(s)	814, 861, 940, 1294, 1357
CviQI	GTAC	5 cut(s)	814, 861, 940, 1294, 1357
DdeI	CTNAG	2 cut(s)	1334, 1452
DpnI	GATC	5 cut(s)	168, 240, 250, 1794, 1818
DpnII	GATC	5 cut(s)	166, 238, 248, 1792, 1816
DraIII	CACNNNGTG	1 cut(s)	701
DrdI	GACNNNNNNGTC	2 cut(s)	1193, 1712
DseDI	GACNNNNNNGTC	2 cut(s)	1193, 1712
EaeI	YGGCCR	1 cut(s)	1147
Eam1104I	CTCTTC	2 cut(s)	1290, 2061
EarI	CTCTTC	2 cut(s)	1290, 2061
Eco130I	CCWWGG	5 cut(s)	136, 532, 587, 1687, 1797
Eco47I	GGWCC	3 cut(s)	479, 599, 1186
Eco57I	CTGAAG	2 cut(s)	75, 1845
EcoNI	CCTNNNNNAGG	1 cut(s)	1528
EcoO109I	RGGNCCY	1 cut(s)	1186
EcoRI	GAATTC	1 cut(s)	2032
EcoRII	CCWGG	4 cut(s)	475, 631, 904, 1888
EcoT14I	CCWWGG	5 cut(s)	136, 532, 587, 1687, 1797
EcoT22I	ATGCAT	3 cut(s)	175, 1731, 1737
ErhI	CCWWGG	5 cut(s)	136, 532, 587, 1687, 1797
FalI	AAGNNNNNCTT	2 cut(s)	1531, 1563
FaqI	GGGAC	5 cut(s)	1119, 1592, 1651, 1705, 1982
FauI	CCCGC	2 cut(s)	1535, 1985
FauNDI	CATATG	3 cut(s)	294, 1255, 1731
FbaI	TGATCA	1 cut(s)	166
Fnu4HI	GCNGC	6 cut(s)	72, 255, 902, 1308, 1311, 1574
FokI	GGATG	3 cut(s)	1130, 1707, 1869
Fsp4HI	GCNGC	6 cut(s)	72, 255, 902, 1308, 1311, 1574
FspBI	CTAG	6 cut(s)	131, 711, 1052, 1200, 1389, 1983
GlaI	GCGC	1 cut(s)	33
GluI	GCNGC	6 cut(s)	72, 255, 902, 1308, 1311, 1574
GsuI	CTGGAG	1 cut(s)	1335
HaeIII	GGCC	3 cut(s)	201, 1149, 1996
HapII	CCGG	2 cut(s)	482, 1103
HgaI	GACGC	1 cut(s)	1395
HhaI	GCGC	1 cut(s)	34
Hin1I	GRCGYC	1 cut(s)	1406
Hin6I	GCGC	1 cut(s)	32
HinP1I	GCGC	1 cut(s)	32
HincII	GTYRAC	3 cut(s)	520, 988, 2044
HindII	GTYRAC	3 cut(s)	520, 988, 2044
HindIII	AAGCTT	2 cut(s)	124, 1339
HinfI	GANTC	7 cut(s)	46, 302, 845, 1553, 1601, 1667, 1872
HpaII	CCGG	2 cut(s)	482, 1103
HphI	GGTGA	6 cut(s)	255, 515, 541, 637, 1657, 2066
Hpy166II	GTNNAC	6 cut(s)	208, 496, 520, 816, 988, 2044
Hpy188I	TCNGA	4 cut(s)	595, 880, 1871, 1978
Hpy188III	TCNNGA	6 cut(s)	43, 53, 323, 1352, 1823, 1918
Hpy8I	GTNNAC	6 cut(s)	208, 496, 520, 816, 988, 2044
Hpy99I	CGWCG	2 cut(s)	948, 1411
HpyAV	CCTTC	3 cut(s)	16, 198, 668
HpyCH4III	ACNGT	7 cut(s)	331, 511, 682, 721, 944, 1042, 1709
HpyCH4IV	ACGT	2 cut(s)	490, 522
HpyF10VI	GCNNNNNNNGC	2 cut(s)	71, 110
HpyF3I	CTNAG	2 cut(s)	1334, 1452
HpySE526I	ACGT	2 cut(s)	490, 522
Hsp92I	GRCGYC	1 cut(s)	1406
HspAI	GCGC	1 cut(s)	32
Ksp22I	TGATCA	1 cut(s)	166
Kzo9I	GATC	5 cut(s)	166, 238, 248, 1792, 1816
LmnI	GCTCC	4 cut(s)	285, 348, 929, 1058
Lsp1109I	GCAGC	6 cut(s)	83, 266, 913, 1319, 1322, 1560
LweI	GCATC	2 cut(s)	815, 871
MaeI	CTAG	6 cut(s)	131, 711, 1052, 1200, 1389, 1983
MaeII	ACGT	2 cut(s)	490, 522
MaeIII	GTNAC	7 cut(s)	76, 151, 1195, 1219, 1427, 1447, 1828
MalI	GATC	5 cut(s)	168, 240, 250, 1794, 1818
MboI	GATC	5 cut(s)	166, 238, 248, 1792, 1816
MboII	GAAGA	9 cut(s)	191, 252, 683, 797, 965, 968, 1277, 1412, 2078
MflI	RGATCY	2 cut(s)	238, 1816
MlsI	TGGCCA	1 cut(s)	1149
MluCI	AATT	9 cut(s)	421, 801, 1558, 1588, 1677, 1774, 1807, 2032, 2057
MluNI	TGGCCA	1 cut(s)	1149
MlyI	GAGTC	2 cut(s)	311, 854
MmeI	TCCRAC	3 cut(s)	216, 1027, 1738
MnlI	CCTC	8 cut(s)	45, 60, 374, 423, 1177, 1235, 1830, 1847
Mox20I	TGGCCA	1 cut(s)	1149
Mph1103I	ATGCAT	3 cut(s)	175, 1731, 1737
MscI	TGGCCA	1 cut(s)	1149
MseI	TTAA	3 cut(s)	318, 893, 1928
MslI	CAYNNNNRTG	8 cut(s)	66, 297, 396, 501, 561, 879, 1215, 1734
Msp20I	TGGCCA	1 cut(s)	1149
MspA1I	CMGCKG	1 cut(s)	1573
MspI	CCGG	2 cut(s)	482, 1103
MspR9I	CCNGG	5 cut(s)	477, 633, 906, 1104, 1890
Mva1269I	GAATGC	2 cut(s)	1006, 1986
MvaI	CCWGG	4 cut(s)	477, 633, 906, 1890
MvnI	CGCG	1 cut(s)	1992
MwoI	GCNNNNNNNGC	2 cut(s)	71, 110
NciI	CCSGG	1 cut(s)	1104
NcoI	CCATGG	1 cut(s)	587
NdeI	CATATG	3 cut(s)	294, 1255, 1731
NdeII	GATC	5 cut(s)	166, 238, 248, 1792, 1816
NlaIV	GGNNCC	5 cut(s)	240, 287, 757, 1060, 1188
NmuCI	GTSAC	3 cut(s)	151, 1195, 1427
NsiI	ATGCAT	3 cut(s)	175, 1731, 1737
NspI	RCATGY	3 cut(s)	695, 924, 2011
OliI	CACNNNNGTG	1 cut(s)	501
PaeI	GCATGC	2 cut(s)	695, 924
PagI	TCATGA	1 cut(s)	42
PctI	GAATGC	2 cut(s)	1006, 1986
PfeI	GAWTC	5 cut(s)	46, 1553, 1601, 1667, 1872
PflFI	GACNNNGTC	1 cut(s)	329
PflMI	CCANNNNNTGG	1 cut(s)	558
PfoI	TCCNGGA	1 cut(s)	1102
PkrI	GCNGC	6 cut(s)	73, 256, 903, 1309, 1312, 1575
PleI	GAGTC	2 cut(s)	310, 853
PpsI	GAGTC	2 cut(s)	310, 853
Ppu21I	YACGTR	1 cut(s)	491
PpuMI	RGGWCCY	1 cut(s)	1186
PshBI	ATTAAT	1 cut(s)	318
PsiI	TTATAA	1 cut(s)	1587
Psp5II	RGGWCCY	1 cut(s)	1186
Psp6I	CCWGG	4 cut(s)	475, 631, 904, 1888
PspGI	CCWGG	4 cut(s)	475, 631, 904, 1888
PspN4I	GGNNCC	5 cut(s)	240, 287, 757, 1060, 1188
PspPI	GGNCC	4 cut(s)	479, 599, 1186, 1994
PspPPI	RGGWCCY	1 cut(s)	1186
PstI	CTGCAG	1 cut(s)	1195
PstNI	CAGNNNCTG	2 cut(s)	329, 1604
PsuI	RGATCY	2 cut(s)	238, 1816
PsyI	GACNNNGTC	1 cut(s)	329
PvuII	CAGCTG	1 cut(s)	1573
RsaI	GTAC	5 cut(s)	815, 862, 941, 1295, 1358
RsaNI	GTAC	5 cut(s)	814, 861, 940, 1294, 1357
RseI	CAYNNNNRTG	8 cut(s)	66, 297, 396, 501, 561, 879, 1215, 1734
SaqAI	TTAA	3 cut(s)	318, 893, 1928
SatI	GCNGC	6 cut(s)	72, 255, 902, 1308, 1311, 1574
Sau3AI	GATC	5 cut(s)	166, 238, 248, 1792, 1816
Sau96I	GGNCC	4 cut(s)	479, 599, 1186, 1994
SchI	GAGTC	2 cut(s)	311, 854
ScrFI	CCNGG	5 cut(s)	477, 633, 906, 1104, 1890
SfaNI	GCATC	2 cut(s)	815, 871
SfcI	CTRYAG	2 cut(s)	1191, 1528
SinI	GGWCC	3 cut(s)	479, 599, 1186
SmiMI	CAYNNNNRTG	8 cut(s)	66, 297, 396, 501, 561, 879, 1215, 1734
SmlI	CTYRAG	1 cut(s)	1177
SmoI	CTYRAG	1 cut(s)	1177
SphI	GCATGC	2 cut(s)	695, 924
Sse9I	AATT	9 cut(s)	421, 801, 1558, 1588, 1677, 1774, 1807, 2032, 2057
SsiI	CCGC	3 cut(s)	773, 1542, 1992
SspI	AATATT	2 cut(s)	1154, 1459
SspMI	CTAG	6 cut(s)	131, 711, 1052, 1200, 1389, 1983
StyD4I	CCNGG	5 cut(s)	475, 631, 904, 1102, 1888
StyI	CCWWGG	5 cut(s)	136, 532, 587, 1687, 1797
TaaI	ACNGT	7 cut(s)	331, 511, 682, 721, 944, 1042, 1709
TaiI	ACGT	2 cut(s)	493, 525
TaqI	TCGA	5 cut(s)	97, 1377, 1409, 1491, 1917
TasI	AATT	9 cut(s)	421, 801, 1558, 1588, 1677, 1774, 1807, 2032, 2057
TatI	WGTACW	1 cut(s)	1293
TfiI	GAWTC	5 cut(s)	46, 1553, 1601, 1667, 1872
Tru1I	TTAA	3 cut(s)	318, 893, 1928
Tru9I	TTAA	3 cut(s)	318, 893, 1928
TscAI	CASTG	6 cut(s)	334, 340, 563, 1045, 1087, 1951
TseFI	GTSAC	3 cut(s)	151, 1195, 1427
TseI	GCWGC	6 cut(s)	71, 254, 901, 1307, 1310, 1573
Tsp45I	GTSAC	3 cut(s)	151, 1195, 1427
TspGWI	ACGGA	1 cut(s)	1005
TspRI	CASTG	6 cut(s)	334, 340, 563, 1045, 1087, 1951
Tth111I	GACNNNGTC	1 cut(s)	329
Van91I	CCANNNNNTGG	1 cut(s)	558
VpaK11BI	GGWCC	3 cut(s)	479, 599, 1186
VspI	ATTAAT	1 cut(s)	318
XagI	CCTNNNNNAGG	1 cut(s)	1528
XapI	RAATTY	4 cut(s)	1558, 1774, 2032, 2057
XceI	RCATGY	3 cut(s)	695, 924, 2011
XcmI	CCANNNNNNNNNTGG	1 cut(s)	585
XspI	CTAG	6 cut(s)	131, 711, 1052, 1200, 1389, 1983
Zsp2I	ATGCAT	3 cut(s)	175, 1731, 1737

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.