DNA repair
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G18760 AT2G18760 AT2G18760 AT2G18760 AT2G18760 AT2G18760 AT2G18760 |
| fragaria_vesca | FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 FvH4_2g21200 |
| malus_domestica | MD05G1194600.v1.1 |
| prunus_persica | Prupe.8G221300_v2.0.a1 |
| pyrus_communis | pycom05g18190 pycom10g15720 |
| rosa_chinensis | RchiOBHm_Chr6g0287701 |
| rosa_laevigata | RLG00000012472 |
| rosa_multiflora | Rmu_sc0003335.1_g000002 Rmu_sc0037270.1_g000001 Rmu_sc0037271.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00181080 Rroxscaffold_7G00181270 |
| rosa_rugosa | Rorug06G0190800 Rorug06G0190900 Rorug06G0191000 Rorug06G0191100 |
| rosa_samantha | Rh6AG301300 Rh6BG307000 Rh6CG302500 Rh6CG315200 Rh6DG298700 |
| rosa_wichuraiana | Rw6G026000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1217, 3146 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 390 |
| Acc36I | ACCTGC | 2 cut(s) | 1217, 3146 |
| Acc65I | GGTACC | 1 cut(s) | 1380 |
| AccB1I | GGYRCC | 3 cut(s) | 1380, 1523, 1742 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1533 |
| AccI | GTMKAC | 1 cut(s) | 1098 |
| AccII | CGCG | 3 cut(s) | 188, 2256, 2809 |
| AclWI | GGATC | 6 cut(s) | 173, 677, 740, 2700, 2971, 2984 |
| AcoI | YGGCCR | 4 cut(s) | 51, 189, 372, 2164 |
| AcuI | CTGAAG | 5 cut(s) | 344, 2784, 2972, 3255, 3477 |
| AcyI | GRCGYC | 1 cut(s) | 42 |
| AfaI | GTAC | 9 cut(s) | 1154, 1313, 1382, 1722, 2806, 2832, 3462, 3481, 3508 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 458, 627, 1131, 1132, 1533, 2180, 3618 |
| AflIII | ACRYGT | 1 cut(s) | 1996 |
| AjiI | CACGTC | 1 cut(s) | 48 |
| AjnI | CCWGG | 6 cut(s) | 1061, 1077, 1269, 1798, 2516, 3330 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 276, 308 |
| AleI | CACNNNNGTG | 1 cut(s) | 3524 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3172, 3204 |
| Alw21I | GWGCWC | 5 cut(s) | 1058, 1294, 2475, 2788, 3163 |
| Alw26I | GTCTC | 3 cut(s) | 580, 1498, 2712 |
| Alw44I | GTGCAC | 2 cut(s) | 1290, 3159 |
| AlwI | GGATC | 6 cut(s) | 173, 677, 740, 2700, 2971, 2984 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1571 |
| Ama87I | CYCGRG | 1 cut(s) | 2679 |
| AoxI | GGCC | 8 cut(s) | 51, 189, 372, 725, 2164, 2370, 2514, 3416 |
| ApaLI | GTGCAC | 2 cut(s) | 1290, 3159 |
| ApeKI | GCWGC | 8 cut(s) | 617, 800, 847, 881, 2010, 3071, 3361, 3529 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1653, 1685 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 657, 1465, 2304 |
| Asp718I | GGTACC | 1 cut(s) | 1380 |
| AspLEI | GCGC | 3 cut(s) | 1953, 2196, 3087 |
| AspS9I | GGNCC | 4 cut(s) | 725, 1192, 1776, 3416 |
| AsuC2I | CCSGG | 1 cut(s) | 3205 |
| AsuHPI | GGTGA | 6 cut(s) | 134, 314, 1063, 1869, 2008, 2330 |
| AsuII | TTCGAA | 1 cut(s) | 661 |
| AvaI | CYCGRG | 1 cut(s) | 2679 |
| AvaII | GGWCC | 2 cut(s) | 1192, 1776 |
| BaeGI | GKGCMC | 3 cut(s) | 1294, 1747, 3163 |
| BalI | TGGCCA | 1 cut(s) | 374 |
| BamHI | GGATCC | 1 cut(s) | 2976 |
| BanI | GGYRCC | 3 cut(s) | 1380, 1523, 1742 |
| BauI | CACGAG | 1 cut(s) | 2577 |
| BbsI | GAAGAC | 5 cut(s) | 15, 291, 765, 1786, 1994 |
| Bbv12I | GWGCWC | 5 cut(s) | 1058, 1294, 2475, 2788, 3163 |
| BbvI | GCAGC | 8 cut(s) | 629, 812, 834, 893, 2022, 3083, 3373, 3541 |
| BceAI | ACGGC | 6 cut(s) | 590, 1826, 1921, 2098, 3093, 3389 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1286, 1320, 2234, 2268 |
| BciT130I | CCWGG | 6 cut(s) | 1063, 1079, 1271, 1800, 2518, 3332 |
| BciVI | GTATCC | 2 cut(s) | 1122, 1900 |
| BclI | TGATCA | 2 cut(s) | 1929, 3003 |
| BcnI | CCSGG | 1 cut(s) | 3205 |
| BcoDI | GTCTC | 3 cut(s) | 580, 1498, 2712 |
| BfaI | CTAG | 8 cut(s) | 795, 1697, 2441, 3311, 3381, 3390, 3423, 3602 |
| BfmI | CTRYAG | 2 cut(s) | 2329, 2586 |
| BfuAI | ACCTGC | 2 cut(s) | 1217, 3146 |
| BfuI | GTATCC | 2 cut(s) | 1122, 1900 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3424 |
| BglII | AGATCT | 2 cut(s) | 1924, 3559 |
| BlpI | GCTNAGC | 1 cut(s) | 29 |
| BmcAI | AGTACT | 1 cut(s) | 3462 |
| Bme1390I | CCNGG | 7 cut(s) | 1063, 1079, 1271, 1800, 2518, 3205, 3332 |
| Bme18I | GGWCC | 2 cut(s) | 1192, 1776 |
| BmeT110I | CYCGRG | 1 cut(s) | 2679 |
| BmgBI | CACGTC | 1 cut(s) | 48 |
| BmgT120I | GGNCC | 4 cut(s) | 725, 1192, 1776, 3416 |
| BmiI | GGNNCC | 7 cut(s) | 1193, 1382, 1525, 1744, 2495, 2978, 3107 |
| BmrFI | CCNGG | 7 cut(s) | 1063, 1079, 1271, 1800, 2518, 3205, 3332 |
| BmrI | ACTGGG | 3 cut(s) | 1331, 1645, 3147 |
| BmsI | GCATC | 8 cut(s) | 232, 260, 592, 604, 1528, 2106, 2758, 3284 |
| BmuI | ACTGGG | 3 cut(s) | 1331, 1645, 3147 |
| BpiI | GAAGAC | 5 cut(s) | 15, 291, 765, 1786, 1994 |
| BpmI | CTGGAG | 2 cut(s) | 150, 1110 |
| Bpu10I | CCTNAGC | 2 cut(s) | 905, 1419 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 29 |
| Bpu14I | TTCGAA | 1 cut(s) | 661 |
| BpuEI | CTTGAG | 5 cut(s) | 437, 896, 1043, 2168, 3059 |
| BpuMI | CCSGG | 1 cut(s) | 3205 |
| BsaAI | YACGTR | 1 cut(s) | 1430 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1110 |
| BsaHI | GRCGYC | 1 cut(s) | 42 |
| BsaI | GGTCTC | 1 cut(s) | 1498 |
| BsaJI | CCNNGG | 9 cut(s) | 186, 869, 1061, 1062, 1285, 1798, 2517, 3175, 3405 |
| BsaWI | WCCGGW | 1 cut(s) | 166 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 137, 167 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 458, 627, 1131, 1132, 1533, 2180, 3618 |
| Bse118I | RCCGGY | 1 cut(s) | 110 |
| Bse1I | ACTGG | 8 cut(s) | 786, 1093, 1195, 1337, 1491, 1640, 2495, 3142 |
| Bse3DI | GCAATG | 4 cut(s) | 112, 145, 1213, 3080 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1110 |
| BseBI | CCWGG | 6 cut(s) | 1063, 1079, 1271, 1800, 2518, 3332 |
| BseDI | CCNNGG | 9 cut(s) | 186, 869, 1061, 1062, 1285, 1798, 2517, 3175, 3405 |
| BseJI | GATNNNNATC | 1 cut(s) | 1110 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 458, 627, 1131, 1132, 1533, 2180, 3618 |
| BseMI | GCAATG | 4 cut(s) | 112, 145, 1213, 3080 |
| BseNI | ACTGG | 8 cut(s) | 786, 1093, 1195, 1337, 1491, 1640, 2495, 3142 |
| BseRI | GAGGAG | 5 cut(s) | 158, 161, 164, 1934, 3056 |
| BseSI | GKGCMC | 3 cut(s) | 1294, 1747, 3163 |
| BseXI | GCAGC | 8 cut(s) | 629, 812, 834, 893, 2022, 3083, 3373, 3541 |
| BseYI | CCCAGC | 4 cut(s) | 2655, 3269, 3281, 3413 |
| BsgI | GTGCAG | 2 cut(s) | 492, 3548 |
| Bsh1236I | CGCG | 3 cut(s) | 188, 2256, 2809 |
| BshFI | GGCC | 8 cut(s) | 53, 191, 374, 727, 2166, 2372, 2516, 3418 |
| BshNI | GGYRCC | 3 cut(s) | 1380, 1523, 1742 |
| BsiHKAI | GWGCWC | 5 cut(s) | 1058, 1294, 2475, 2788, 3163 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2679 |
| BsiSI | CCGG | 5 cut(s) | 111, 167, 1948, 2167, 3204 |
| BslFI | GGGAC | 4 cut(s) | 89, 2458, 2564, 3110 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 458, 627, 1131, 1132, 1533, 2180, 3618 |
| BsmAI | GTCTC | 3 cut(s) | 580, 1498, 2712 |
| BsmFI | GGGAC | 4 cut(s) | 89, 2458, 2564, 3110 |
| BsmI | GAATGC | 4 cut(s) | 1876, 1975, 3016, 3102 |
| BsnI | GGCC | 8 cut(s) | 53, 191, 374, 727, 2166, 2372, 2516, 3418 |
| Bso31I | GGTCTC | 1 cut(s) | 1498 |
| BsoBI | CYCGRG | 1 cut(s) | 2679 |
| Bsp119I | TTCGAA | 1 cut(s) | 661 |
| Bsp1286I | GDGCHC | 6 cut(s) | 1058, 1294, 1747, 2475, 2788, 3163 |
| Bsp1407I | TGTACA | 2 cut(s) | 1311, 3479 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 29 |
| BspANI | GGCC | 8 cut(s) | 53, 191, 374, 727, 2166, 2372, 2516, 3418 |
| BspFNI | CGCG | 3 cut(s) | 188, 2256, 2809 |
| BspHI | TCATGA | 4 cut(s) | 1408, 1734, 2995, 3006 |
| BspLI | GGNNCC | 7 cut(s) | 1193, 1382, 1525, 1744, 2495, 2978, 3107 |
| BspMI | ACCTGC | 2 cut(s) | 1217, 3146 |
| BspPI | GGATC | 6 cut(s) | 173, 677, 740, 2700, 2971, 2984 |
| BspT104I | TTCGAA | 1 cut(s) | 661 |
| BspT107I | GGYRCC | 3 cut(s) | 1380, 1523, 1742 |
| BspTNI | GGTCTC | 1 cut(s) | 1498 |
| BsrDI | GCAATG | 4 cut(s) | 112, 145, 1213, 3080 |
| BsrFI | RCCGGY | 1 cut(s) | 110 |
| BsrGI | TGTACA | 2 cut(s) | 1311, 3479 |
| BsrI | ACTGG | 8 cut(s) | 786, 1093, 1195, 1337, 1491, 1640, 2495, 3142 |
| BssAI | RCCGGY | 1 cut(s) | 110 |
| BssECI | CCNNGG | 9 cut(s) | 186, 869, 1061, 1062, 1285, 1798, 2517, 3175, 3405 |
| BssNI | GRCGYC | 1 cut(s) | 42 |
| BssSI | CACGAG | 1 cut(s) | 2577 |
| BssT1I | CCWWGG | 2 cut(s) | 869, 1285 |
| Bst2BI | CACGAG | 1 cut(s) | 2577 |
| Bst2UI | CCWGG | 6 cut(s) | 1063, 1079, 1271, 1800, 2518, 3332 |
| Bst6I | CTCTTC | 3 cut(s) | 2586, 2702, 3018 |
| BstACI | GRCGYC | 1 cut(s) | 42 |
| BstAUI | TGTACA | 2 cut(s) | 1311, 3479 |
| BstBAI | YACGTR | 1 cut(s) | 1430 |
| BstBI | TTCGAA | 1 cut(s) | 661 |
| BstDSI | CCRYGG | 3 cut(s) | 186, 3175, 3405 |
| BstFNI | CGCG | 3 cut(s) | 188, 2256, 2809 |
| BstHHI | GCGC | 3 cut(s) | 1953, 2196, 3087 |
| BstMAI | GTCTC | 3 cut(s) | 580, 1498, 2712 |
| BstNI | CCWGG | 6 cut(s) | 1063, 1079, 1271, 1800, 2518, 3332 |
| BstNSI | RCATGY | 4 cut(s) | 368, 2000, 2162, 2512 |
| BstSCI | CCNGG | 7 cut(s) | 1061, 1077, 1269, 1798, 2516, 3203, 3330 |
| BstSFI | CTRYAG | 2 cut(s) | 2329, 2586 |
| BstSLI | GKGCMC | 3 cut(s) | 1294, 1747, 3163 |
| BstUI | CGCG | 3 cut(s) | 188, 2256, 2809 |
| BstV1I | GCAGC | 8 cut(s) | 629, 812, 834, 893, 2022, 3083, 3373, 3541 |
| BstV2I | GAAGAC | 5 cut(s) | 15, 291, 765, 1786, 1994 |
| BstX2I | RGATCY | 5 cut(s) | 669, 1924, 2692, 2976, 3559 |
| BstYI | RGATCY | 5 cut(s) | 669, 1924, 2692, 2976, 3559 |
| BsuI | GTATCC | 2 cut(s) | 1122, 1900 |
| BsuRI | GGCC | 8 cut(s) | 53, 191, 374, 727, 2166, 2372, 2516, 3418 |
| BtgI | CCRYGG | 3 cut(s) | 186, 3175, 3405 |
| BtgZI | GCGATG | 3 cut(s) | 1015, 2237, 2940 |
| BtrI | CACGTC | 1 cut(s) | 48 |
| BtsI | GCAGTG | 2 cut(s) | 1292, 2203 |
| BveI | ACCTGC | 2 cut(s) | 1217, 3146 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1571 |
| CciI | TCATGA | 4 cut(s) | 1408, 1734, 2995, 3006 |
| CfoI | GCGC | 3 cut(s) | 1953, 2196, 3087 |
| Cfr10I | RCCGGY | 1 cut(s) | 110 |
| Cfr13I | GGNCC | 4 cut(s) | 725, 1192, 1776, 3416 |
| Cfr42I | CCGCGG | 1 cut(s) | 189 |
| CseI | GACGC | 2 cut(s) | 31, 971 |
| Csp6I | GTAC | 9 cut(s) | 1153, 1312, 1381, 1721, 2805, 2831, 3461, 3480, 3507 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 613, 648 |
| CviQI | GTAC | 9 cut(s) | 1153, 1312, 1381, 1721, 2805, 2831, 3461, 3480, 3507 |
| DraI | TTTAAA | 1 cut(s) | 2674 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 390 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 390 |
| EaeI | YGGCCR | 4 cut(s) | 51, 189, 372, 2164 |
| Eam1104I | CTCTTC | 3 cut(s) | 2586, 2702, 3018 |
| EarI | CTCTTC | 3 cut(s) | 2586, 2702, 3018 |
| Eco130I | CCWWGG | 2 cut(s) | 869, 1285 |
| Eco31I | GGTCTC | 1 cut(s) | 1498 |
| Eco47I | GGWCC | 2 cut(s) | 1192, 1776 |
| Eco57I | CTGAAG | 5 cut(s) | 344, 2784, 2972, 3255, 3477 |
| Eco88I | CYCGRG | 1 cut(s) | 2679 |
| EcoRI | GAATTC | 6 cut(s) | 1668, 2092, 2185, 3199, 3318, 3511 |
| EcoRII | CCWGG | 6 cut(s) | 1061, 1077, 1269, 1798, 2516, 3330 |
| EcoT14I | CCWWGG | 2 cut(s) | 869, 1285 |
| ErhI | CCWWGG | 2 cut(s) | 869, 1285 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2681, 2713 |
| FaqI | GGGAC | 4 cut(s) | 89, 2458, 2564, 3110 |
| FauI | CCCGC | 4 cut(s) | 555, 839, 2541, 3611 |
| FauNDI | CATATG | 1 cut(s) | 2836 |
| FbaI | TGATCA | 2 cut(s) | 1929, 3003 |
| FblI | GTMKAC | 1 cut(s) | 1098 |
| FspBI | CTAG | 8 cut(s) | 795, 1697, 2441, 3311, 3381, 3390, 3423, 3602 |
| GlaI | GCGC | 3 cut(s) | 1952, 2195, 3086 |
| GsaI | CCCAGC | 4 cut(s) | 2659, 3273, 3285, 3417 |
| GsuI | CTGGAG | 2 cut(s) | 150, 1110 |
| HaeIII | GGCC | 8 cut(s) | 53, 191, 374, 727, 2166, 2372, 2516, 3418 |
| HapII | CCGG | 5 cut(s) | 111, 167, 1948, 2167, 3204 |
| HgaI | GACGC | 2 cut(s) | 31, 971 |
| HhaI | GCGC | 3 cut(s) | 1953, 2196, 3087 |
| Hin1I | GRCGYC | 1 cut(s) | 42 |
| Hin6I | GCGC | 3 cut(s) | 1951, 2194, 3085 |
| HinP1I | GCGC | 3 cut(s) | 1951, 2194, 3085 |
| HincII | GTYRAC | 1 cut(s) | 1633 |
| HindII | GTYRAC | 1 cut(s) | 1633 |
| HindIII | AAGCTT | 3 cut(s) | 1387, 2232, 3048 |
| HpaII | CCGG | 5 cut(s) | 111, 167, 1948, 2167, 3204 |
| HphI | GGTGA | 6 cut(s) | 134, 314, 1063, 1869, 2008, 2330 |
| Hpy166II | GTNNAC | 7 cut(s) | 1099, 1292, 1484, 1633, 1706, 1723, 3161 |
| Hpy8I | GTNNAC | 7 cut(s) | 1099, 1292, 1484, 1633, 1706, 1723, 3161 |
| Hpy99I | CGWCG | 1 cut(s) | 52 |
| HpyCH4IV | ACGT | 4 cut(s) | 47, 1429, 1629, 2553 |
| HpySE526I | ACGT | 4 cut(s) | 47, 1429, 1629, 2553 |
| Hsp92I | GRCGYC | 1 cut(s) | 42 |
| HspAI | GCGC | 3 cut(s) | 1951, 2194, 3085 |
| KpnI | GGTACC | 1 cut(s) | 1384 |
| Ksp22I | TGATCA | 2 cut(s) | 1929, 3003 |
| KspI | CCGCGG | 1 cut(s) | 189 |
| LmnI | GCTCC | 5 cut(s) | 135, 2242, 2521, 3043, 3105 |
| Lsp1109I | GCAGC | 8 cut(s) | 629, 812, 834, 893, 2022, 3083, 3373, 3541 |
| LweI | GCATC | 8 cut(s) | 232, 260, 592, 604, 1528, 2106, 2758, 3284 |
| MaeI | CTAG | 8 cut(s) | 795, 1697, 2441, 3311, 3381, 3390, 3423, 3602 |
| MaeII | ACGT | 4 cut(s) | 47, 1429, 1629, 2553 |
| MflI | RGATCY | 5 cut(s) | 669, 1924, 2692, 2976, 3559 |
| MhlI | GDGCHC | 6 cut(s) | 1058, 1294, 1747, 2475, 2788, 3163 |
| MlsI | TGGCCA | 1 cut(s) | 374 |
| MluNI | TGGCCA | 1 cut(s) | 374 |
| MlyI | GAGTC | 4 cut(s) | 400, 486, 1418, 2822 |
| MmeI | TCCRAC | 2 cut(s) | 591, 3267 |
| Mox20I | TGGCCA | 1 cut(s) | 374 |
| MroXI | GAANNNNTTC | 3 cut(s) | 657, 1465, 2304 |
| MscI | TGGCCA | 1 cut(s) | 374 |
| MseI | TTAA | 8 cut(s) | 567, 674, 2229, 2375, 2388, 2673, 3537, 3573 |
| MslI | CAYNNNNRTG | 2 cut(s) | 303, 3524 |
| Msp20I | TGGCCA | 1 cut(s) | 374 |
| MspA1I | CMGCKG | 3 cut(s) | 188, 3170, 3233 |
| MspI | CCGG | 5 cut(s) | 111, 167, 1948, 2167, 3204 |
| MspR9I | CCNGG | 7 cut(s) | 1063, 1079, 1271, 1800, 2518, 3205, 3332 |
| Mva1269I | GAATGC | 4 cut(s) | 1876, 1975, 3016, 3102 |
| MvaI | CCWGG | 6 cut(s) | 1063, 1079, 1271, 1800, 2518, 3332 |
| MvnI | CGCG | 3 cut(s) | 188, 2256, 2809 |
| NciI | CCSGG | 1 cut(s) | 3205 |
| NdeI | CATATG | 1 cut(s) | 2836 |
| NlaIV | GGNNCC | 7 cut(s) | 1193, 1382, 1525, 1744, 2495, 2978, 3107 |
| NmuCI | GTSAC | 3 cut(s) | 43, 3110, 3429 |
| NspI | RCATGY | 4 cut(s) | 368, 2000, 2162, 2512 |
| NspV | TTCGAA | 1 cut(s) | 661 |
| OliI | CACNNNNGTG | 1 cut(s) | 3524 |
| PaeI | GCATGC | 1 cut(s) | 368 |
| PaeR7I | CTCGAG | 1 cut(s) | 2679 |
| PagI | TCATGA | 4 cut(s) | 1408, 1734, 2995, 3006 |
| PaqCI | CACCTGC | 2 cut(s) | 1217, 3146 |
| PasI | CCCWGGG | 1 cut(s) | 1062 |
| PciI | ACATGT | 1 cut(s) | 1996 |
| PctI | GAATGC | 4 cut(s) | 1876, 1975, 3016, 3102 |
| PdmI | GAANNNNTTC | 3 cut(s) | 657, 1465, 2304 |
| PflFI | GACNNNGTC | 1 cut(s) | 476 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1533 |
| PleI | GAGTC | 4 cut(s) | 399, 485, 1418, 2821 |
| PpsI | GAGTC | 4 cut(s) | 399, 485, 1418, 2821 |
| Ppu21I | YACGTR | 1 cut(s) | 1430 |
| PscI | ACATGT | 1 cut(s) | 1996 |
| Psp6I | CCWGG | 6 cut(s) | 1061, 1077, 1269, 1798, 2516, 3330 |
| PspFI | CCCAGC | 4 cut(s) | 2655, 3269, 3281, 3413 |
| PspGI | CCWGG | 6 cut(s) | 1061, 1077, 1269, 1798, 2516, 3330 |
| PspN4I | GGNNCC | 7 cut(s) | 1193, 1382, 1525, 1744, 2495, 2978, 3107 |
| PspPI | GGNCC | 4 cut(s) | 725, 1192, 1776, 3416 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1571 |
| PsuI | RGATCY | 5 cut(s) | 669, 1924, 2692, 2976, 3559 |
| PsyI | GACNNNGTC | 1 cut(s) | 476 |
| PvuII | CAGCTG | 1 cut(s) | 3170 |
| RsaI | GTAC | 9 cut(s) | 1154, 1313, 1382, 1722, 2806, 2832, 3462, 3481, 3508 |
| RsaNI | GTAC | 9 cut(s) | 1153, 1312, 1381, 1721, 2805, 2831, 3461, 3480, 3507 |
| RseI | CAYNNNNRTG | 2 cut(s) | 303, 3524 |
| SacII | CCGCGG | 1 cut(s) | 189 |
| SaqAI | TTAA | 8 cut(s) | 567, 674, 2229, 2375, 2388, 2673, 3537, 3573 |
| Sau96I | GGNCC | 4 cut(s) | 725, 1192, 1776, 3416 |
| ScaI | AGTACT | 1 cut(s) | 3462 |
| SchI | GAGTC | 4 cut(s) | 400, 486, 1418, 2822 |
| ScrFI | CCNGG | 7 cut(s) | 1063, 1079, 1271, 1800, 2518, 3205, 3332 |
| SduI | GDGCHC | 6 cut(s) | 1058, 1294, 1747, 2475, 2788, 3163 |
| SfaNI | GCATC | 8 cut(s) | 232, 260, 592, 604, 1528, 2106, 2758, 3284 |
| SfcI | CTRYAG | 2 cut(s) | 2329, 2586 |
| Sfr274I | CTCGAG | 1 cut(s) | 2679 |
| Sfr303I | CCGCGG | 1 cut(s) | 189 |
| SfuI | TTCGAA | 1 cut(s) | 661 |
| SgrBI | CCGCGG | 1 cut(s) | 189 |
| SinI | GGWCC | 2 cut(s) | 1192, 1776 |
| SlaI | CTCGAG | 1 cut(s) | 2679 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 303, 3524 |
| SmlI | CTYRAG | 6 cut(s) | 416, 875, 1022, 2147, 2679, 3038 |
| SmoI | CTYRAG | 6 cut(s) | 416, 875, 1022, 2147, 2679, 3038 |
| SphI | GCATGC | 1 cut(s) | 368 |
| SspI | AATATT | 2 cut(s) | 490, 2947 |
| SspMI | CTAG | 8 cut(s) | 795, 1697, 2441, 3311, 3381, 3390, 3423, 3602 |
| StyD4I | CCNGG | 7 cut(s) | 1061, 1077, 1269, 1798, 2516, 3203, 3330 |
| StyI | CCWWGG | 2 cut(s) | 869, 1285 |
| TaiI | ACGT | 4 cut(s) | 50, 1432, 1632, 2556 |
| TaqI | TCGA | 6 cut(s) | 261, 342, 465, 661, 2680, 3322 |
| TatI | WGTACW | 5 cut(s) | 1152, 1311, 1720, 3460, 3479 |
| TauI | GCSGC | 2 cut(s) | 191, 711 |
| Tru1I | TTAA | 8 cut(s) | 567, 674, 2229, 2375, 2388, 2673, 3537, 3573 |
| Tru9I | TTAA | 8 cut(s) | 567, 674, 2229, 2375, 2388, 2673, 3537, 3573 |
| TseFI | GTSAC | 3 cut(s) | 43, 3110, 3429 |
| TseI | GCWGC | 8 cut(s) | 617, 800, 847, 881, 2010, 3071, 3361, 3529 |
| Tsp45I | GTSAC | 3 cut(s) | 43, 3110, 3429 |
| TspGWI | ACGGA | 4 cut(s) | 403, 446, 656, 3164 |
| Tth111I | GACNNNGTC | 1 cut(s) | 476 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1533 |
| VneI | GTGCAC | 2 cut(s) | 1290, 3159 |
| VpaK11BI | GGWCC | 2 cut(s) | 1192, 1776 |
| XceI | RCATGY | 4 cut(s) | 368, 2000, 2162, 2512 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 1085, 1226, 2062, 3497 |
| XhoI | CTCGAG | 1 cut(s) | 2679 |
| XmiI | GTMKAC | 1 cut(s) | 1098 |
| XmnI | GAANNNNTTC | 3 cut(s) | 657, 1465, 2304 |
| XspI | CTAG | 8 cut(s) | 795, 1697, 2441, 3311, 3381, 3390, 3423, 3602 |
| ZrmI | AGTACT | 1 cut(s) | 3462 |