pycom05g28920

transcriptional co-repressor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0012593
Physical Location & Seq
Reverse (-)
29470275 .. 29475402
5128 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1659 bp
ATGGGTTCAGGTTCACACTGGGATGCTGAAAAAATGTTTAATCTGTATTTACATGACTATATGGTGAAAAAAAATATGCACGAGACTGCTGCAATTTTCAGGGAGGAGGCTGATGTTTTCAACCATCCTGTTGTCATTAATAGTCCAGACGGATTCTTGCACGAATGGTGGTCTTTGTTTCATGATGTGTATGCCCTTCGGCACTTAGAGGCTCAAGAGGCCGAGGCAGGACCGTCTGCAACTGAGGCTAAGCAAATGCGAGAGAATGAAGGACAGAATAAGCGTCCAAGAGCGGCACGTAAAGCAACCACCCCACCGAAGCCTCCACAATTTTATAAGGGTACTAGTTCAAGGTCTGTTGCAACCAGGTCAAGCCATATGCAGCCAGAACTTCCCAATTACGCTCAACAGCAGGCACAGGACAACAGAAGCTCGGGCAGGGCTGTCACTGAGGACCCTAGGCTTTATGGATTGCGTCGTACCACATTGCCAGTAACTGAAGATCTGGATTCAGGTATGCTTGCAGTCAATCCTGGAACACTTCATGGGAGGCCTTTAGAAGTATTAAACTCAGCCTTGCAGGCTCCAAATCATAAGCAACACCAGGCTTTGAACCATCAGAAACAACAGGCTTTGAATGATCAGCAAAAACAGGGTCCAAGCCATCAGCAACAGATTCAGACGTTGACAACAGAACATCAGTATCCGTGTTTGGATCAGAATGGCAGACAGAGGAAGACAGCACCCCATTTGAGAACTGGAGGCAGCGCTTTGGACGAAATGAATGCTAATGAAGAAATACCTGTGGAAGAAAATGCCGAATCTTTCTTGTCCACTGGTGATGACAACGTTGATGGTACACGCACTCCTTTCAGATTTTTAAGACGTCGTGCTACAGCTTGCAACAAAAATGAACAAAAAGGCTTCACATTTGAAGAAGTTGGTTCCCTCCACTCAAGCAAGTCGAAGGTTGTATGCTGCCATTTTTCATCAGAAGGGAACTTGTTAGCTAGTGCAGGGCATGAGAAAAAGTCAAGCAGATCATTGTCCCAGCTTGTAGGGCACTCTGAGCAAGTAATGTCAGTGGATTTCCACCCAAGGCAGGTCAATCTCCTTTGCTCATGTGGTAGTAACGATGAAGTTCGACTTTGGAACACCATCCAATGTGCTTGCACACGCTTGTTTAAGGGAGCAACTAAACAAGTCAGATTCCAGCCTCAATTTGGAAAGTTTTTGGCTACTGCTTCAGGAAAAGATATCAATATATTTGATCTTGAGACTGGACGGATTGAGTTGTTCTTGACGGGATCCGGACACGCCAAAGATATTCTTTCACTTTGCTGGGACCCCACTGGGAAGTATCTTGCCTCTGTTAGTGAAGATAGTGCAAGAGTTTGGTCTCCTGCGTCAAACGGGAAATGCATATACGAACTGAAATCAAATGGCAACAAATTCCAATCATGCACATTTCATCCCGGATATTCACTGCTCTTGATTATCGGTGGTTACCAGACCCTTGAGTTGTGGAGTCCAAGCGAGAGCAGCAAGACACTGACAGTTCCGGCGCACCAGGGGATAGTTTCTGCACTGTCAGCATCCGCGAATACTGAAATGGTTGCCTCAGTGAGCCATGATCAGTGTGTGAAGCTATGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001101 GO:0001558 GO:0001666 GO:0003002 GO:0003006 GO:0005975 GO:0005976 GO:0006355 GO:0006950 GO:0006974 GO:0006979 GO:0007275 GO:0007389 GO:0008150 GO:0008152 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009624 GO:0009628 GO:0009636 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009798 GO:0009845 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009943 GO:0009944 GO:0009955 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010073 GO:0010154 GO:0010191 GO:0010214 GO:0010243 GO:0010272 GO:0010393 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022603 GO:0022604 GO:0030307 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0032504 GO:0033554 GO:0036293 GO:0040008 GO:0042221 GO:0042493 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0045892 GO:0045927 GO:0045934 GO:0045995 GO:0046677 GO:0046898 GO:0048316 GO:0048359 GO:0048507 GO:0048509 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048580 GO:0048608 GO:0048609 GO:0048638 GO:0048639 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051130 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0051510 GO:0051512 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0060992 GO:0061458 GO:0065001 GO:0065007 GO:0070482 GO:0071216 GO:0071217 GO:0071496 GO:0071704 GO:0080001 GO:0080090 GO:0090351 GO:0097305 GO:1901654 GO:1901698 GO:1901700 GO:1902074 GO:1902183 GO:1902679 GO:1903506 GO:1903507 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LisH WD40

Protein Analysis

553

Amino Acids

61.43

Weight (kDa)

7.35

Isoelectric Point (pI)

54.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WD40_WDHD1_1st PF24817 301 - 492 4.5e-16 WDHD1 first WD40 domain
Beta-prop_WDR5 PF25175 314 - 395 4.9e-09 WDR5 beta-propeller domain
Beta-prop_WDR3_1st PF25173 316 - 402 7.7e-07 WDR3 first beta-propeller domain
WD40_Prp19 PF24814 318 - 429 1.6e-07 Prp19 WD40 domain
Beta-prop_THOC3 PF25174 321 - 396 2.4e-08 THOC3 beta-propeller domain
WD40_CDC20-Fz PF24807 344 - 552 7.6e-15 CDC20/Fizzy WD40 domain
WD40_Prp19 PF24814 358 - 551 3.4e-22 Prp19 WD40 domain
Beta-prop_WDR5 PF25175 399 - 551 6.1e-23 WDR5 beta-propeller domain
Beta-prop_THOC3 PF25174 399 - 551 4e-18 THOC3 beta-propeller domain
Beta-prop_WDR3_1st PF25173 400 - 552 8.7e-16 WDR3 first beta-propeller domain
Beta-prop_WDR3_2nd PF25172 442 - 552 1.2e-08 WDR3 second beta-propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 336
AatII GACGTC 1 cut(s) 889
Acc36I ACCTGC 1 cut(s) 1093
AccBSI CCGCTC 1 cut(s) 293
AccII CGCG 1 cut(s) 1601
AccIII TCCGGA 1 cut(s) 1310
AciI CCGC 2 cut(s) 293, 1599
AclI AACGTT 1 cut(s) 849
AclWI GGATC 3 cut(s) 723, 1302, 1315
AcsI RAATTY 1 cut(s) 1451
AcuI CTGAAG 2 cut(s) 519, 1230
AcyI GRCGYC 1 cut(s) 886
AfaI GTAC 3 cut(s) 343, 481, 859
AfeI AGCGCT 1 cut(s) 769
AfiI CCNNNNNNNGG 2 cut(s) 1102, 1223
AgsI TTSAA 5 cut(s) 121, 351, 613, 637, 935
AhlI ACTAGT 1 cut(s) 344
AjnI CCWGG 4 cut(s) 365, 532, 603, 1569
AluBI AGCT 5 cut(s) 432, 899, 1010, 1054, 1648
AluI AGCT 5 cut(s) 432, 899, 1010, 1054, 1648
Alw26I GTCTC 3 cut(s) 77, 1271, 1404
AlwI GGATC 3 cut(s) 723, 1302, 1315
AlwNI CAGNNNCTG 1 cut(s) 497
Ama87I CYCGRG 1 cut(s) 433
Aor13HI TCCGGA 1 cut(s) 1310
Aor51HI AGCGCT 1 cut(s) 769
AoxI GGCC 2 cut(s) 219, 551
ApeKI GCWGC 5 cut(s) 89, 382, 765, 978, 1542
ApoI RAATTY 1 cut(s) 1451
ArsI GACNNNNNNTTYG 2 cut(s) 640, 672
AseI ATTAAT 1 cut(s) 138
AspA2I CCTAGG 1 cut(s) 458
AspLEI GCGC 2 cut(s) 770, 1567
AspS9I GGNCC 4 cut(s) 230, 454, 656, 1345
AsuC2I CCSGG 1 cut(s) 1476
AsuHPI GGTGA 2 cut(s) 76, 851
AvaI CYCGRG 1 cut(s) 433
AvaII GGWCC 4 cut(s) 230, 454, 656, 1345
AvrII CCTAGG 1 cut(s) 458
BaeGI GKGCMC 1 cut(s) 1065
BaeI ACNNNNGTAYC 2 cut(s) 686, 719
BamHI GGATCC 1 cut(s) 1307
BauI CACGAG 1 cut(s) 80
BbsI GAAGAC 1 cut(s) 743
BbvI GCAGC 5 cut(s) 76, 394, 777, 965, 1554
BccI CCATC 5 cut(s) 132, 624, 672, 848, 1166
BcgI CGANNNNNNTGC 4 cut(s) 71, 105, 767, 801
BciT130I CCWGG 4 cut(s) 367, 534, 605, 1571
BciVI GTATCC 1 cut(s) 714
BclI TGATCA 2 cut(s) 640, 1633
BcnI CCSGG 1 cut(s) 1476
BcoDI GTCTC 3 cut(s) 77, 1271, 1404
BcuI ACTAGT 1 cut(s) 344
BfaI CTAG 3 cut(s) 345, 459, 1011
BfmI CTRYAG 1 cut(s) 894
BfoI RGCGCY 1 cut(s) 771
BfuAI ACCTGC 1 cut(s) 1093
BfuI GTATCC 1 cut(s) 714
BglI GCCNNNNNGGC 1 cut(s) 581
BglII AGATCT 1 cut(s) 502
BisI GCNGC 6 cut(s) 90, 294, 383, 766, 979, 1543
BlnI CCTAGG 1 cut(s) 458
BlpI GCTNAGC 1 cut(s) 249
BlsI GCNGC 6 cut(s) 91, 295, 384, 767, 980, 1544
Bme1390I CCNGG 5 cut(s) 367, 534, 605, 1476, 1571
Bme18I GGWCC 4 cut(s) 230, 454, 656, 1345
BmeT110I CYCGRG 1 cut(s) 433
BmgT120I GGNCC 4 cut(s) 230, 454, 656, 1345
BmiI GGNNCC 7 cut(s) 456, 585, 657, 946, 1309, 1346, 1347
BmrFI CCNGG 5 cut(s) 367, 534, 605, 1476, 1571
BmrI ACTGGG 2 cut(s) 28, 1362
BmsI GCATC 2 cut(s) 13, 1604
BmuI ACTGGG 2 cut(s) 28, 1362
BpiI GAAGAC 1 cut(s) 743
BpmI CTGGAG 1 cut(s) 780
Bpu1102I GCTNAGC 1 cut(s) 249
BpuEI CTTGAG 4 cut(s) 198, 940, 1295, 1538
BpuMI CCSGG 1 cut(s) 1476
BsaAI YACGTR 1 cut(s) 299
BsaHI GRCGYC 1 cut(s) 886
BsaI GGTCTC 1 cut(s) 1404
BsaJI CCNNGG 4 cut(s) 222, 458, 1097, 1570
BsaWI WCCGGW 1 cut(s) 1310
BsaXI ACNNNNNCTCC 2 cut(s) 850, 880
Bsc4I CCNNNNNNNGG 2 cut(s) 1102, 1223
Bse1I ACTGG 6 cut(s) 23, 491, 763, 841, 1285, 1357
Bse3DI GCAATG 1 cut(s) 485
BseAI TCCGGA 1 cut(s) 1310
BseBI CCWGG 4 cut(s) 367, 534, 605, 1571
BseDI CCNNGG 4 cut(s) 222, 458, 1097, 1570
BseGI GGATG 5 cut(s) 28, 124, 1158, 1471, 1595
BseLI CCNNNNNNNGG 2 cut(s) 1102, 1223
BseMI GCAATG 1 cut(s) 485
BseMII CTCAG 5 cut(s) 234, 441, 585, 1059, 1635
BseNI ACTGG 6 cut(s) 23, 491, 763, 841, 1285, 1357
BseRI GAGGAG 1 cut(s) 119
BseSI GKGCMC 1 cut(s) 1065
BseXI GCAGC 5 cut(s) 76, 394, 777, 965, 1554
BseYI CCCAGC 2 cut(s) 1050, 1341
BsgI GTGCAG 2 cut(s) 1035, 1569
Bsh1236I CGCG 1 cut(s) 1601
BshFI GGCC 2 cut(s) 221, 553
BsiHKCI CYCGRG 1 cut(s) 433
BsiSI CCGG 3 cut(s) 1311, 1476, 1562
BslFI GGGAC 2 cut(s) 1033, 1358
BslI CCNNNNNNNGG 2 cut(s) 1102, 1223
BsmAI GTCTC 3 cut(s) 77, 1271, 1404
BsmFI GGGAC 2 cut(s) 1033, 1358
BsmI GAATGC 1 cut(s) 790
BsnI GGCC 2 cut(s) 221, 553
Bso31I GGTCTC 1 cut(s) 1404
BsoBI CYCGRG 1 cut(s) 433
Bsp1286I GDGCHC 1 cut(s) 1065
Bsp13I TCCGGA 1 cut(s) 1310
Bsp143I GATC 7 cut(s) 502, 640, 715, 1040, 1270, 1307, 1633
Bsp1720I GCTNAGC 1 cut(s) 249
BspACI CCGC 2 cut(s) 293, 1599
BspANI GGCC 2 cut(s) 221, 553
BspCNI CTCAG 5 cut(s) 235, 442, 584, 1060, 1634
BspEI TCCGGA 1 cut(s) 1310
BspFNI CGCG 1 cut(s) 1601
BspHI TCATGA 1 cut(s) 181
BspLI GGNNCC 7 cut(s) 456, 585, 657, 946, 1309, 1346, 1347
BspMI ACCTGC 1 cut(s) 1093
BspPI GGATC 3 cut(s) 723, 1302, 1315
BspTNI GGTCTC 1 cut(s) 1404
BsrBI CCGCTC 1 cut(s) 293
BsrDI GCAATG 1 cut(s) 485
BsrI ACTGG 6 cut(s) 23, 491, 763, 841, 1285, 1357
BssECI CCNNGG 4 cut(s) 222, 458, 1097, 1570
BssMI GATC 7 cut(s) 502, 640, 715, 1040, 1270, 1307, 1633
BssNI GRCGYC 1 cut(s) 886
BssSI CACGAG 1 cut(s) 80
BssT1I CCWWGG 2 cut(s) 458, 1097
Bst2BI CACGAG 1 cut(s) 80
Bst2UI CCWGG 4 cut(s) 367, 534, 605, 1571
Bst4CI ACNGT 3 cut(s) 234, 1558, 1590
BstACI GRCGYC 1 cut(s) 886
BstBAI YACGTR 1 cut(s) 299
BstC8I GCNNGC 5 cut(s) 414, 522, 582, 901, 1171
BstDEI CTNAG 7 cut(s) 205, 243, 249, 450, 571, 1068, 1621
BstEII GGTNACC 1 cut(s) 1505
BstF5I GGATG 5 cut(s) 28, 124, 1158, 1471, 1595
BstFNI CGCG 1 cut(s) 1601
BstH2I RGCGCY 1 cut(s) 771
BstHHI GCGC 2 cut(s) 770, 1567
BstKTI GATC 7 cut(s) 505, 643, 718, 1043, 1273, 1310, 1636
BstMAI GTCTC 3 cut(s) 77, 1271, 1404
BstMBI GATC 7 cut(s) 502, 640, 715, 1040, 1270, 1307, 1633
BstMWI GCNNNNNNNGC 8 cut(s) 218, 245, 302, 581, 1060, 1069, 1542, 1592
BstNI CCWGG 4 cut(s) 367, 534, 605, 1571
BstPI GGTNACC 1 cut(s) 1505
BstSCI CCNGG 5 cut(s) 365, 532, 603, 1474, 1569
BstSFI CTRYAG 1 cut(s) 894
BstSLI GKGCMC 1 cut(s) 1065
BstUI CGCG 1 cut(s) 1601
BstV1I GCAGC 5 cut(s) 76, 394, 777, 965, 1554
BstV2I GAAGAC 1 cut(s) 743
BstX2I RGATCY 2 cut(s) 502, 1307
BstYI RGATCY 2 cut(s) 502, 1307
BsuI GTATCC 1 cut(s) 714
BsuRI GGCC 2 cut(s) 221, 553
BtsCI GGATG 5 cut(s) 28, 124, 1158, 1471, 1595
BtsI GCAGTG 1 cut(s) 1484
BveI ACCTGC 1 cut(s) 1093
Cac8I GCNNGC 5 cut(s) 414, 522, 582, 901, 1171
CaiI CAGNNNCTG 1 cut(s) 497
CciI TCATGA 1 cut(s) 181
CfoI GCGC 2 cut(s) 770, 1567
Cfr13I GGNCC 4 cut(s) 230, 454, 656, 1345
CseI GACGC 3 cut(s) 272, 464, 1395
CsiI ACCWGGT 1 cut(s) 365
Csp6I GTAC 3 cut(s) 342, 480, 858
CviAII CATG 7 cut(s) 53, 182, 545, 1022, 1122, 1461, 1631
CviQI GTAC 3 cut(s) 342, 480, 858
DdeI CTNAG 7 cut(s) 205, 243, 249, 450, 571, 1068, 1621
DpnI GATC 7 cut(s) 504, 642, 717, 1042, 1272, 1309, 1635
DpnII GATC 7 cut(s) 502, 640, 715, 1040, 1270, 1307, 1633
Eco130I CCWWGG 2 cut(s) 458, 1097
Eco147I AGGCCT 1 cut(s) 553
Eco31I GGTCTC 1 cut(s) 1404
Eco32I GATATC 1 cut(s) 1258
Eco47I GGWCC 4 cut(s) 230, 454, 656, 1345
Eco47III AGCGCT 1 cut(s) 769
Eco57I CTGAAG 2 cut(s) 519, 1230
Eco88I CYCGRG 1 cut(s) 433
Eco91I GGTNACC 1 cut(s) 1505
EcoO109I RGGNCCY 2 cut(s) 454, 1345
EcoO65I GGTNACC 1 cut(s) 1505
EcoRII CCWGG 4 cut(s) 365, 532, 603, 1569
EcoRV GATATC 1 cut(s) 1258
EcoT14I CCWWGG 2 cut(s) 458, 1097
EcoT22I ATGCAT 1 cut(s) 1424
ErhI CCWWGG 2 cut(s) 458, 1097
FaeI CATG 7 cut(s) 56, 185, 548, 1025, 1125, 1464, 1634
FalI AAGNNNNNCTT 4 cut(s) 1131, 1163, 1314, 1346
FaqI GGGAC 2 cut(s) 1033, 1358
FatI CATG 7 cut(s) 52, 181, 544, 1021, 1121, 1460, 1630
FauNDI CATATG 1 cut(s) 378
FbaI TGATCA 2 cut(s) 640, 1633
Fnu4HI GCNGC 6 cut(s) 90, 294, 383, 766, 979, 1543
FokI GGATG 5 cut(s) 35, 111, 1145, 1458, 1582
Fsp4HI GCNGC 6 cut(s) 90, 294, 383, 766, 979, 1543
FspBI CTAG 3 cut(s) 345, 459, 1011
GlaI GCGC 2 cut(s) 769, 1566
GluI GCNGC 6 cut(s) 90, 294, 383, 766, 979, 1543
GsaI CCCAGC 2 cut(s) 1054, 1345
GsuI CTGGAG 1 cut(s) 780
HaeII RGCGCY 1 cut(s) 771
HaeIII GGCC 2 cut(s) 221, 553
HapII CCGG 3 cut(s) 1311, 1476, 1562
HgaI GACGC 3 cut(s) 272, 464, 1395
HhaI GCGC 2 cut(s) 770, 1567
Hin1I GRCGYC 1 cut(s) 886
Hin1II CATG 7 cut(s) 56, 185, 548, 1025, 1125, 1464, 1634
Hin6I GCGC 2 cut(s) 768, 1565
HinP1I GCGC 2 cut(s) 768, 1565
HincII GTYRAC 1 cut(s) 687
HindII GTYRAC 1 cut(s) 687
HinfI GANTC 6 cut(s) 153, 509, 676, 821, 1209, 1528
HpaII CCGG 3 cut(s) 1311, 1476, 1562
HphI GGTGA 2 cut(s) 76, 851
Hpy166II GTNNAC 4 cut(s) 14, 687, 834, 860
Hpy188I TCNGA 7 cut(s) 621, 681, 720, 875, 994, 1069, 1208
Hpy188III TCNNGA 9 cut(s) 146, 182, 215, 506, 1248, 1274, 1300, 1311, 1492
Hpy8I GTNNAC 4 cut(s) 14, 687, 834, 860
Hpy99I CGWCG 2 cut(s) 480, 891
HpyAV CCTTC 4 cut(s) 206, 263, 961, 989
HpyCH4III ACNGT 3 cut(s) 234, 1558, 1590
HpyCH4IV ACGT 4 cut(s) 298, 683, 849, 886
HpyF10VI GCNNNNNNNGC 8 cut(s) 218, 245, 302, 581, 1060, 1069, 1542, 1592
HpyF3I CTNAG 7 cut(s) 205, 243, 249, 450, 571, 1068, 1621
HpySE526I ACGT 4 cut(s) 298, 683, 849, 886
Hsp92I GRCGYC 1 cut(s) 886
Hsp92II CATG 7 cut(s) 56, 185, 548, 1025, 1125, 1464, 1634
HspAI GCGC 2 cut(s) 768, 1565
KflI GGGWCCC 1 cut(s) 1345
Kpn2I TCCGGA 1 cut(s) 1310
Ksp22I TGATCA 2 cut(s) 640, 1633
Kzo9I GATC 7 cut(s) 502, 640, 715, 1040, 1270, 1307, 1633
LmnI GCTCC 2 cut(s) 589, 1190
Lsp1109I GCAGC 5 cut(s) 76, 394, 777, 965, 1554
LweI GCATC 2 cut(s) 13, 1604
MabI ACCWGGT 1 cut(s) 365
MaeI CTAG 3 cut(s) 345, 459, 1011
MaeII ACGT 4 cut(s) 298, 683, 849, 886
MaeIII GTNAC 4 cut(s) 445, 493, 1130, 1505
MalI GATC 7 cut(s) 504, 642, 717, 1042, 1272, 1309, 1635
MbiI CCGCTC 1 cut(s) 293
MboI GATC 7 cut(s) 502, 640, 715, 1040, 1270, 1307, 1633
MboII GAAGA 6 cut(s) 512, 748, 806, 821, 947, 1391
MflI RGATCY 2 cut(s) 502, 1307
MhlI GDGCHC 1 cut(s) 1065
MluCI AATT 5 cut(s) 93, 329, 397, 1220, 1451
MlyI GAGTC 1 cut(s) 1537
Mph1103I ATGCAT 1 cut(s) 1424
MroI TCCGGA 1 cut(s) 1310
MseI TTAA 5 cut(s) 39, 138, 566, 881, 1185
MslI CAYNNNNRTG 1 cut(s) 21
MspI CCGG 3 cut(s) 1311, 1476, 1562
MspR9I CCNGG 5 cut(s) 367, 534, 605, 1476, 1571
Mva1269I GAATGC 1 cut(s) 790
MvaI CCWGG 4 cut(s) 367, 534, 605, 1571
MvnI CGCG 1 cut(s) 1601
MwoI GCNNNNNNNGC 8 cut(s) 218, 245, 302, 581, 1060, 1069, 1542, 1592
NciI CCSGG 1 cut(s) 1476
NdeI CATATG 1 cut(s) 378
NdeII GATC 7 cut(s) 502, 640, 715, 1040, 1270, 1307, 1633
NlaIII CATG 7 cut(s) 56, 185, 548, 1025, 1125, 1464, 1634
NlaIV GGNNCC 7 cut(s) 456, 585, 657, 946, 1309, 1346, 1347
NmeAIII GCCGAG 1 cut(s) 247
NmuCI GTSAC 1 cut(s) 445
NsiI ATGCAT 1 cut(s) 1424
PagI TCATGA 1 cut(s) 181
PceI AGGCCT 1 cut(s) 553
PctI GAATGC 1 cut(s) 790
PfeI GAWTC 5 cut(s) 153, 509, 676, 821, 1209
PfoI TCCNGGA 2 cut(s) 532, 1474
PkrI GCNGC 6 cut(s) 91, 295, 384, 767, 980, 1544
PleI GAGTC 1 cut(s) 1536
PpsI GAGTC 1 cut(s) 1536
Ppu21I YACGTR 1 cut(s) 299
PpuMI RGGWCCY 2 cut(s) 454, 1345
PshBI ATTAAT 1 cut(s) 138
PsiI TTATAA 1 cut(s) 336
Psp1406I AACGTT 1 cut(s) 849
Psp5II RGGWCCY 2 cut(s) 454, 1345
Psp6I CCWGG 4 cut(s) 365, 532, 603, 1569
PspEI GGTNACC 1 cut(s) 1505
PspFI CCCAGC 2 cut(s) 1050, 1341
PspGI CCWGG 4 cut(s) 365, 532, 603, 1569
PspN4I GGNNCC 7 cut(s) 456, 585, 657, 946, 1309, 1346, 1347
PspPI GGNCC 4 cut(s) 230, 454, 656, 1345
PspPPI RGGWCCY 2 cut(s) 454, 1345
PstNI CAGNNNCTG 1 cut(s) 497
PsuI RGATCY 2 cut(s) 502, 1307
RsaI GTAC 3 cut(s) 343, 481, 859
RsaNI GTAC 3 cut(s) 342, 480, 858
RseI CAYNNNNRTG 1 cut(s) 21
SaqAI TTAA 5 cut(s) 39, 138, 566, 881, 1185
SatI GCNGC 6 cut(s) 90, 294, 383, 766, 979, 1543
Sau3AI GATC 7 cut(s) 502, 640, 715, 1040, 1270, 1307, 1633
Sau96I GGNCC 4 cut(s) 230, 454, 656, 1345
SchI GAGTC 1 cut(s) 1537
ScrFI CCNGG 5 cut(s) 367, 534, 605, 1476, 1571
SduI GDGCHC 1 cut(s) 1065
SexAI ACCWGGT 1 cut(s) 365
SfaNI GCATC 2 cut(s) 13, 1604
SfcI CTRYAG 1 cut(s) 894
SinI GGWCC 4 cut(s) 230, 454, 656, 1345
SmiMI CAYNNNNRTG 1 cut(s) 21
SmlI CTYRAG 4 cut(s) 213, 955, 1274, 1517
SmoI CTYRAG 4 cut(s) 213, 955, 1274, 1517
SpeI ACTAGT 1 cut(s) 344
Sse9I AATT 5 cut(s) 93, 329, 397, 1220, 1451
SseBI AGGCCT 1 cut(s) 553
SsiI CCGC 2 cut(s) 293, 1599
SspMI CTAG 3 cut(s) 345, 459, 1011
StuI AGGCCT 1 cut(s) 553
StyD4I CCNGG 5 cut(s) 365, 532, 603, 1474, 1569
StyI CCWWGG 2 cut(s) 458, 1097
TaaI ACNGT 3 cut(s) 234, 1558, 1590
TaiI ACGT 4 cut(s) 301, 686, 852, 889
TaqI TCGA 2 cut(s) 965, 1144
TasI AATT 5 cut(s) 93, 329, 397, 1220, 1451
TauI GCSGC 1 cut(s) 296
TfiI GAWTC 5 cut(s) 153, 509, 676, 821, 1209
Tru1I TTAA 5 cut(s) 39, 138, 566, 881, 1185
Tru9I TTAA 5 cut(s) 39, 138, 566, 881, 1185
TseFI GTSAC 1 cut(s) 445
TseI GCWGC 5 cut(s) 89, 382, 765, 978, 1542
Tsp45I GTSAC 1 cut(s) 445
TspDTI ATGAA 9 cut(s) 170, 282, 533, 797, 807, 927, 978, 1152, 1460
TspGWI ACGGA 3 cut(s) 165, 696, 1300
VpaK11BI GGWCC 4 cut(s) 230, 454, 656, 1345
VspI ATTAAT 1 cut(s) 138
XapI RAATTY 1 cut(s) 1451
XcmI CCANNNNNNNNNTGG 2 cut(s) 755, 1220
XmaJI CCTAGG 1 cut(s) 458
XspI CTAG 3 cut(s) 345, 459, 1011
ZraI GACGTC 1 cut(s) 887
Zsp2I ATGCAT 1 cut(s) 1424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.