Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0005133

Physical Location & Seq

Genomic Coordinates Reverse (-)

30215212 .. 30222090

Gene Structure 6879 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g29890.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGTCGTCGTCTTCGTCGGCTTCCAAGGTCTGCTACAATTCTGAGTGCAAGGAGGTGAAATCGGAGTTTCCGAGAAAGGGCTGGCGGCTTCGGACTGGCGAGTACTGCGAACTCTGCGATCGGTGCTATTTTGCTTATGAGGAAGGGAGATTCTGTGAGACCTTTCATATGAATGCTGCTGGTTGGAGGTGCTGTGAGTCTTGTGGGAAGCGGGTTCATTGTGGATGCATCGTTTCAAGTCACGCATTTACATTGTTGGATCCCGGAGGAATTGAGTGCATGACATGTGCAAGGAAAAATTATGTAATGACATCAAACCCAGCATGGCCAACATCTATGTTCTTCCATTCACCTTTATCTGAGAGACTTAAGGACCTGTCTACCAAAAATTGGACTCAGTTGGCTGGATCTGGTCCTGTACCATGGAGGCAAGCGCCCAGTTTATTCAATTCTTCTATTCCTTCATCTGAGTTGCATACGAGGGTGCCACATGAAGTTGATGGTTCAACTGGAATTAACAAGCTTAATGCCAGTGAGAGAATATTTGTCTCCACCTTGGAAAAGAAGAAAGTTGAGGAATTTTCTGAAAGACTAATGAAAGTAAACCTAAGTATTGGCACACAACAAAGTCTTGAAAATGGGATTGGGAACCCAGGAATTAACCATGAGGAGAAAAGTAGTTCATGTTTAAATATATCCCAGCAGTCTGCCTCTTTGAAGGAGGAACCGTCTACTCCACAGTTTGTACCTTATGGATCTCCCAGTGAAACAAATCCACAACTGGGGTTTACTGGAACTAATTTGCGGCCAATCGCTCCTTTGGCAAAGAATTATAATGGTAATGGAGTTGAATCATCTGGTGATAATCAGATCCGCAATGCAAGGCCTAGAGTAGATGCCCGGGGAAGAAATCAGTTACTTCCTCGGTACTGGCCTAGATTGATTATCGATCAAGAGCTGCAGCATATATCTGGAGATAAAAATTCTGTAATCACTCCATTATTCGAGAAAATGTTGAGTGCTAGTGATGCTGGGCGGATCGGGCGTTTGGTGTTGCCAAAAAAATGTGCAGAGGCCTACTTTCCTCCAATTTCTCAGCCTGAAGGGTTACCTCTTAAAGTCCAGGATTCAAAAGGCAAGGAATGGATATTTCAGTTTCGCTTCTGGCCCAACAACAATAGCAGAATGTATGTTTTGGAGGGGGTTACCCCTTGCATACAATCCATGCAATTGCTGGCCGGTGACATAGTGACATTTAGTCGATTGGAGCCAGAAGGGAAATTGGTTATGGGGTTCAGAAAGGCTTCAACTTCCCTACAATCTGATCAGGAAAATGAGGCAAACAAGACAACCAACGGAGTTTCAGCCCATGCAGAAGTTGAATTGGCAGATCCTAGCTCATGGTCTAATGTTGATAAGTCAGGTTACATAGCAAAAGAAGCACTGGAAGATAAATCTTTGATCCCTAAAAAAAGAAAGAACAGTAACTTGGGTTCTAAGAGTAAGCGTCTGAGAATTGAAAATGAAGACGTGATAGAACTGAAGGTTACATGGGAAGAAGCTCAAGGCCTGCTTCGTCCTCCTGCTAACCATGTTCCCACTGTTGTGGTGATTGAAGGCTTTGAGTTTGAGGAATATGAGGATGCTCCAATTCTTGGGAAGCCAACAATTTATGCGACGGGCAGAGCAGGTGAGAAGATTCAGTGGGTTCAATGCGAAGATTGTTTCAAATGGCGCAAACTGCCAATCAATGCTCTTCTACCATCAAAGTGGACTTGTTCTGAGAATTCATGGGACCCTGAAAGATCTTTGTGTTCAGCAGCTCAAGAATTGACAACGGAACAGCTTCAAGATTTGCTACCACGCTGTAATACAGTTGCTTCGAAGAAATTGAAGGCTGCTAAACAGGACCCCGATAACATTGAAGTTCTGGAGGGGCTTGACACACTTGCGAACCTAGCCATCTTGGGAGAGGGTGAGTCACTCCCATCATCAGCTCAGGCCACCACAAAGCACCCCCGACATAGGCCCGGATGCTCATGTATTGTCTGCATCCAGCCCCCTAGTGGGAAGGGTCCTAAACACAAGCAAACATGCACCTGCAATGTATGCTTAACAGTGAAGCGCCGCTTCCGTACATTAATGATGCGGCGTGAGAAGAAACAGTCAGATAAAGAAGCAGAAACTACACGCAGAAAGCAGCACAAGGGGCAATTACTGGTGGTTGATAAACCGGAGGATGACACCCTATCATATTGTAACGCAGGAAGCAGTAGTCCAAACCAGAAAATAGAGATCCTTGAGCTTTCCGATGATGACCTTAACATGACGAAATCCTCAACTTCACCTTTCAAAGGCCAAATTGACCTGAATATCCAGCCAGAACGGGAGGATGAGCTATCACCTGGATCCGATTCAGGCGGCATGATGAAGTTACTTCACGATGCCACAGCAAGGTATCTCAGGCAGCAAAGATTGTCAAGCTCTGGTGGTAGTGAAAAGTCATCAGGCAACGGGTCACAACGAGCTGCAAGTGAAGCAGGAGGGGGAGAACCCCTCAGCAATGGTGTAAACCTCGAAAGTAGCAATGTTGTAAACCTCGAAAGTAGCAATCATGACAGCAGCAACGACTGTCCTGCAACTTTATCCATTAAACCATCGGCATCCATGACTGCCACGGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B3 zf-CW

Protein Analysis

895

Amino Acids

98.75

Weight (kDa)

7.42

Isoelectric Point (pI)

49.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21550 AT4G21550 AT4G21550
fragaria_vesca	FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120
malus_domestica	MD05G1324700.v1.1 MD10G1302500.v1.1
prunus_persica	Prupe.4G036100_v2.0.a1
pyrus_communis	pycom05g29890 pycom10g25500
rosa_chinensis	RchiOBHm_Chr5g0006571
rosa_laevigata	RLG00000031400
rosa_multiflora	Rmu_sc0007807.1_g000001 Rmu_sc0011154.1_g000008 Rmu_sc0011154.1_g000009
rosa_roxburghii	Rroxscaffold_1G00069470
rosa_rugosa	Rorug04G0422600.1 Rorug04G0422700
rosa_samantha	Rh5AG049800 Rh5BG049100 Rh5CG057400 Rh5DG048500
rosa_wichuraiana	Rw5G004990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	834
AarI	CACCTGC	2 cut(s)	1679, 2108
Acc36I	ACCTGC	2 cut(s)	1679, 2108
AccB1I	GGYRCC	1 cut(s)	484
AccB7I	CCANNNNNTGG	2 cut(s)	390, 1655
AccI	GTMKAC	2 cut(s)	380, 731
AciI	CCGC	8 cut(s)	85, 211, 805, 874, 1036, 2128, 2149, 2421
AcoI	YGGCCR	3 cut(s)	326, 806, 1236
AcsI	RAATTY	3 cut(s)	578, 982, 1786
AcuI	CTGAAG	2 cut(s)	1122, 1562
AfaI	GTAC	5 cut(s)	104, 420, 747, 929, 2137
AfiI	CCNNNNNNNGG	9 cut(s)	77, 390, 782, 1655, 2025, 2066, 2067, 2354, 2454
AflII	CTTAAG	1 cut(s)	368
AflIII	ACRYGT	1 cut(s)	284
AhdI	GACNNNNNGTC	1 cut(s)	1257
AjiI	CACGTC	1 cut(s)	1531
AjnI	CCWGG	3 cut(s)	652, 1122, 2404
AjuI	GAANNNNNNNTTGG	4 cut(s)	627, 659, 1472, 1504
AleI	CACNNNNGTG	1 cut(s)	1604
Alw26I	GTCTC	3 cut(s)	152, 358, 553
Ama87I	CYCGRG	1 cut(s)	900
ApeKI	GCWGC	9 cut(s)	176, 958, 961, 1820, 1898, 2200, 2467, 2528, 2622
ApoI	RAATTY	3 cut(s)	578, 982, 1786
AseI	ATTAAT	1 cut(s)	2141
Asp700I	GAANNNNTTC	2 cut(s)	1303, 1845
AspLEI	GCGC	3 cut(s)	436, 1737, 2127
AspS9I	GGNCC	7 cut(s)	373, 413, 1167, 1795, 1909, 2028, 2075
AsuC2I	CCSGG	4 cut(s)	264, 901, 902, 2031
AsuHPI	GGTGA	9 cut(s)	67, 342, 872, 1253, 1621, 1703, 1988, 2337, 2394
AsuII	TTCGAA	1 cut(s)	1883
AvaI	CYCGRG	1 cut(s)	900
AvaII	GGWCC	5 cut(s)	373, 413, 1795, 1909, 2075
BalI	TGGCCA	1 cut(s)	328
BamHI	GGATCC	2 cut(s)	259, 2408
BanI	GGYRCC	1 cut(s)	484
BbsI	GAAGAC	2 cut(s)	3, 1533
BbvCI	CCTCAGC	1 cut(s)	2558
BbvI	GCAGC	9 cut(s)	163, 945, 973, 1832, 1885, 2212, 2479, 2515, 2634
BccI	CCATC	5 cut(s)	494, 1771, 1970, 1996, 2665
BcgI	CGANNNNNNTGC	2 cut(s)	2618, 2652
BciT130I	CCWGG	3 cut(s)	654, 1124, 2406
BclI	TGATCA	1 cut(s)	1324
BcnI	CCSGG	4 cut(s)	264, 901, 902, 2031
BcoDI	GTCTC	3 cut(s)	152, 358, 553
BfaI	CTAG	6 cut(s)	888, 936, 1023, 1395, 1958, 2064
BfmI	CTRYAG	1 cut(s)	959
BfoI	RGCGCY	2 cut(s)	437, 2128
BfrI	CTTAAG	1 cut(s)	368
BfuAI	ACCTGC	2 cut(s)	1679, 2108
BglII	AGATCT	1 cut(s)	1805
BmcAI	AGTACT	1 cut(s)	104
Bme1390I	CCNGG	7 cut(s)	264, 654, 901, 902, 1124, 2031, 2406
Bme18I	GGWCC	5 cut(s)	373, 413, 1795, 1909, 2075
BmeRI	GACNNNNNGTC	1 cut(s)	1257
BmeT110I	CYCGRG	1 cut(s)	900
BmgBI	CACGTC	1 cut(s)	1531
BmgT120I	GGNCC	7 cut(s)	373, 413, 1167, 1795, 1909, 2028, 2075
BmrFI	CCNGG	7 cut(s)	264, 654, 901, 902, 1124, 2031, 2406
BmrI	ACTGGG	3 cut(s)	432, 756, 791
BmuI	ACTGGG	3 cut(s)	432, 756, 791
BpiI	GAAGAC	2 cut(s)	3, 1533
BplI	GAGNNNNNCTC	2 cut(s)	2541, 2573
BpmI	CTGGAG	2 cut(s)	993, 1952
Bpu10I	CCTNAGC	2 cut(s)	1998, 2558
Bpu14I	TTCGAA	1 cut(s)	1883
BpuEI	CTTGAG	3 cut(s)	1548, 1809, 2321
BpuMI	CCSGG	4 cut(s)	264, 901, 902, 2031
Bsa29I	ATCGAT	1 cut(s)	948
BsaI	GGTCTC	1 cut(s)	152
BsaJI	CCNNGG	8 cut(s)	24, 422, 555, 652, 900, 901, 923, 2676
BsaWI	WCCGGW	1 cut(s)	2233
BsaXI	ACNNNNNCTCC	6 cut(s)	139, 169, 178, 208, 713, 743
Bsc4I	CCNNNNNNNGG	9 cut(s)	77, 390, 782, 1655, 2025, 2066, 2067, 2354, 2454
Bse118I	RCCGGY	1 cut(s)	1238
Bse3DI	GCAATG	4 cut(s)	883, 2110, 2569, 2593
BseBI	CCWGG	3 cut(s)	654, 1124, 2406
BseCI	ATCGAT	1 cut(s)	948
BseDI	CCNNGG	8 cut(s)	24, 422, 555, 652, 900, 901, 923, 2676
BseGI	GGATG	7 cut(s)	230, 1648, 2039, 2052, 2245, 2398, 2663
BseLI	CCNNNNNNNGG	9 cut(s)	77, 390, 782, 1655, 2025, 2066, 2067, 2354, 2454
BseMI	GCAATG	4 cut(s)	883, 2110, 2569, 2593
BseRI	GAGGAG	1 cut(s)	683
BseXI	GCAGC	9 cut(s)	163, 945, 973, 1832, 1885, 2212, 2479, 2515, 2634
BseYI	CCCAGC	3 cut(s)	319, 699, 1031
BsgI	GTGCAG	1 cut(s)	1089
Bsh1285I	CGRYCG	1 cut(s)	121
BshNI	GGYRCC	1 cut(s)	484
BshVI	ATCGAT	1 cut(s)	948
BsiEI	CGRYCG	1 cut(s)	121
BsiHKCI	CYCGRG	1 cut(s)	900
BsiSI	CCGG	5 cut(s)	264, 901, 1239, 2031, 2234
BslFI	GGGAC	1 cut(s)	1808
BslI	CCNNNNNNNGG	9 cut(s)	77, 390, 782, 1655, 2025, 2066, 2067, 2354, 2454
BsmAI	GTCTC	3 cut(s)	152, 358, 553
BsmFI	GGGAC	1 cut(s)	1808
BsmI	GAATGC	1 cut(s)	178
Bso31I	GGTCTC	1 cut(s)	152
BsoBI	CYCGRG	1 cut(s)	900
Bsp119I	TTCGAA	1 cut(s)	1883
Bsp19I	CCATGG	1 cut(s)	422
BspACI	CCGC	8 cut(s)	85, 211, 805, 874, 1036, 2128, 2149, 2421
BspDI	ATCGAT	1 cut(s)	948
BspHI	TCATGA	1 cut(s)	2614
BspMAI	CTGCAG	1 cut(s)	963
BspMI	ACCTGC	2 cut(s)	1679, 2108
BspQI	GCTCTTC	1 cut(s)	1761
BspT104I	TTCGAA	1 cut(s)	1883
BspT107I	GGYRCC	1 cut(s)	484
BspTI	CTTAAG	1 cut(s)	368
BspTNI	GGTCTC	1 cut(s)	152
BsrDI	GCAATG	4 cut(s)	883, 2110, 2569, 2593
BsrFI	RCCGGY	1 cut(s)	1238
BssAI	RCCGGY	1 cut(s)	1238
BssECI	CCNNGG	8 cut(s)	24, 422, 555, 652, 900, 901, 923, 2676
BssT1I	CCWWGG	3 cut(s)	24, 422, 555
Bst2UI	CCWGG	3 cut(s)	654, 1124, 2406
Bst4CI	ACNGT	8 cut(s)	729, 741, 1484, 1603, 1876, 2119, 2166, 2633
Bst6I	CTCTTC	1 cut(s)	1761
BstAFI	CTTAAG	1 cut(s)	368
BstAPI	GCANNNNNTGC	1 cut(s)	2109
BstBI	TTCGAA	1 cut(s)	1883
BstC8I	GCNNGC	4 cut(s)	83, 432, 1236, 1571
BstDSI	CCRYGG	2 cut(s)	422, 2676
BstEII	GGTNACC	2 cut(s)	1107, 1204
BstENI	CCTNNNNNAGG	1 cut(s)	2352
BstF5I	GGATG	7 cut(s)	230, 1648, 2039, 2052, 2245, 2398, 2663
BstH2I	RGCGCY	2 cut(s)	437, 2128
BstHHI	GCGC	3 cut(s)	436, 1737, 2127
BstMAI	GTCTC	3 cut(s)	152, 358, 553
BstMCI	CGRYCG	1 cut(s)	121
BstNI	CCWGG	3 cut(s)	654, 1124, 2406
BstNSI	RCATGY	2 cut(s)	288, 2097
BstPI	GGTNACC	2 cut(s)	1107, 1204
BstSCI	CCNGG	7 cut(s)	262, 652, 899, 900, 1122, 2029, 2404
BstSFI	CTRYAG	1 cut(s)	959
BstV1I	GCAGC	9 cut(s)	163, 945, 973, 1832, 1885, 2212, 2479, 2515, 2634
BstV2I	GAAGAC	2 cut(s)	3, 1533
BstX2I	RGATCY	8 cut(s)	259, 407, 755, 870, 1390, 1805, 2295, 2408
BstXI	CCANNNNNNTGG	2 cut(s)	1606, 1770
BstYI	RGATCY	8 cut(s)	259, 407, 755, 870, 1390, 1805, 2295, 2408
Bsu15I	ATCGAT	1 cut(s)	948
BsuTUI	ATCGAT	1 cut(s)	948
BtgI	CCRYGG	2 cut(s)	422, 2676
BtrI	CACGTC	1 cut(s)	1531
BtsCI	GGATG	7 cut(s)	230, 1648, 2039, 2052, 2245, 2398, 2663
BtsIMutI	CAGTG	6 cut(s)	538, 769, 1442, 1599, 1709, 2124
BveI	ACCTGC	2 cut(s)	1679, 2108
Cac8I	GCNNGC	4 cut(s)	83, 432, 1236, 1571
CciI	TCATGA	1 cut(s)	2614
CfoI	GCGC	3 cut(s)	436, 1737, 2127
Cfr10I	RCCGGY	1 cut(s)	1238
Cfr13I	GGNCC	7 cut(s)	373, 413, 1167, 1795, 1909, 2028, 2075
Cfr9I	CCCGGG	1 cut(s)	900
ClaI	ATCGAT	1 cut(s)	948
CseI	GACGC	1 cut(s)	1496
Csp6I	GTAC	5 cut(s)	103, 419, 746, 928, 2136
CviQI	GTAC	5 cut(s)	103, 419, 746, 928, 2136
DraI	TTTAAA	1 cut(s)	690
DriI	GACNNNNNGTC	1 cut(s)	1257
EaeI	YGGCCR	3 cut(s)	326, 806, 1236
Eam1104I	CTCTTC	1 cut(s)	1761
Eam1105I	GACNNNNNGTC	1 cut(s)	1257
EarI	CTCTTC	1 cut(s)	1761
EciI	GGCGGA	1 cut(s)	1051
Eco130I	CCWWGG	3 cut(s)	24, 422, 555
Eco147I	AGGCCT	3 cut(s)	886, 1076, 1569
Eco31I	GGTCTC	1 cut(s)	152
Eco47I	GGWCC	5 cut(s)	373, 413, 1795, 1909, 2075
Eco57I	CTGAAG	2 cut(s)	1122, 1562
Eco88I	CYCGRG	1 cut(s)	900
Eco91I	GGTNACC	2 cut(s)	1107, 1204
EcoNI	CCTNNNNNAGG	1 cut(s)	2352
EcoO109I	RGGNCCY	4 cut(s)	373, 1795, 1909, 2075
EcoO65I	GGTNACC	2 cut(s)	1107, 1204
EcoRI	GAATTC	1 cut(s)	1786
EcoRII	CCWGG	3 cut(s)	652, 1122, 2404
EcoT14I	CCWWGG	3 cut(s)	24, 422, 555
EcoT22I	ATGCAT	1 cut(s)	230
ErhI	CCWWGG	3 cut(s)	24, 422, 555
FalI	AAGNNNNNCTT	4 cut(s)	1557, 1589, 2114, 2146
FaqI	GGGAC	1 cut(s)	1808
FauI	CCCGC	1 cut(s)	204
FauNDI	CATATG	1 cut(s)	168
FbaI	TGATCA	1 cut(s)	1324
FblI	GTMKAC	2 cut(s)	380, 731
FokI	GGATG	7 cut(s)	237, 1655, 2039, 2046, 2252, 2405, 2650
FspBI	CTAG	6 cut(s)	888, 936, 1023, 1395, 1958, 2064
GlaI	GCGC	3 cut(s)	435, 1736, 2126
GsaI	CCCAGC	3 cut(s)	323, 703, 1035
GsuI	CTGGAG	2 cut(s)	993, 1952
HaeII	RGCGCY	2 cut(s)	437, 2128
HapII	CCGG	5 cut(s)	264, 901, 1239, 2031, 2234
HgaI	GACGC	1 cut(s)	1496
HhaI	GCGC	3 cut(s)	436, 1737, 2127
Hin6I	GCGC	3 cut(s)	434, 1735, 2125
HinP1I	GCGC	3 cut(s)	434, 1735, 2125
HindIII	AAGCTT	1 cut(s)	521
HinfI	GANTC	8 cut(s)	150, 197, 394, 851, 1127, 1699, 1979, 2414
HpaII	CCGG	5 cut(s)	264, 901, 1239, 2031, 2234
HphI	GGTGA	9 cut(s)	67, 342, 872, 1253, 1621, 1703, 1988, 2337, 2394
Hpy166II	GTNNAC	7 cut(s)	381, 604, 732, 789, 1773, 2572, 2596
Hpy8I	GTNNAC	7 cut(s)	381, 604, 732, 789, 1773, 2572, 2596
Hpy99I	CGWCG	3 cut(s)	10, 19, 1681
HpyAV	CCTTC	9 cut(s)	137, 471, 712, 1097, 1268, 1537, 1610, 1888, 2065
HpyCH4III	ACNGT	8 cut(s)	729, 741, 1484, 1603, 1876, 2119, 2166, 2633
HpyCH4IV	ACGT	1 cut(s)	1530
HpySE526I	ACGT	1 cut(s)	1530
HspAI	GCGC	3 cut(s)	434, 1735, 2125
KflI	GGGWCCC	1 cut(s)	1795
Ksp22I	TGATCA	1 cut(s)	1324
LguI	GCTCTTC	1 cut(s)	1761
LmnI	GCTCC	3 cut(s)	820, 1267, 1651
Lsp1109I	GCAGC	9 cut(s)	163, 945, 973, 1832, 1885, 2212, 2479, 2515, 2634
MaeI	CTAG	6 cut(s)	888, 936, 1023, 1395, 1958, 2064
MaeII	ACGT	1 cut(s)	1530
MfeI	CAATTG	1 cut(s)	1229
MflI	RGATCY	8 cut(s)	259, 407, 755, 870, 1390, 1805, 2295, 2408
MlsI	TGGCCA	1 cut(s)	328
MluNI	TGGCCA	1 cut(s)	328
MlyI	GAGTC	3 cut(s)	206, 388, 1988
MmeI	TCCRAC	2 cut(s)	164, 237
Mox20I	TGGCCA	1 cut(s)	328
Mph1103I	ATGCAT	1 cut(s)	230
MroXI	GAANNNNTTC	2 cut(s)	1303, 1845
MscI	TGGCCA	1 cut(s)	328
MslI	CAYNNNNRTG	3 cut(s)	171, 1604, 1768
Msp20I	TGGCCA	1 cut(s)	328
MspCI	CTTAAG	1 cut(s)	368
MspI	CCGG	5 cut(s)	264, 901, 1239, 2031, 2234
MspR9I	CCNGG	7 cut(s)	264, 654, 901, 902, 1124, 2031, 2406
MunI	CAATTG	1 cut(s)	1229
Mva1269I	GAATGC	1 cut(s)	178
MvaI	CCWGG	3 cut(s)	654, 1124, 2406
NciI	CCSGG	4 cut(s)	264, 901, 902, 2031
NcoI	CCATGG	1 cut(s)	422
NdeI	CATATG	1 cut(s)	168
NmuCI	GTSAC	5 cut(s)	239, 1241, 1249, 1980, 2517
NsiI	ATGCAT	1 cut(s)	230
NspI	RCATGY	2 cut(s)	288, 2097
NspV	TTCGAA	1 cut(s)	1883
OliI	CACNNNNGTG	1 cut(s)	1604
PagI	TCATGA	1 cut(s)	2614
PaqCI	CACCTGC	2 cut(s)	1679, 2108
PceI	AGGCCT	3 cut(s)	886, 1076, 1569
PciI	ACATGT	1 cut(s)	284
PciSI	GCTCTTC	1 cut(s)	1761
PcsI	WCGNNNNNNNCGW	2 cut(s)	11, 68
PctI	GAATGC	1 cut(s)	178
PdmI	GAANNNNTTC	2 cut(s)	1303, 1845
PfeI	GAWTC	5 cut(s)	150, 851, 1127, 1699, 2414
PflMI	CCANNNNNTGG	2 cut(s)	390, 1655
PfoI	TCCNGGA	2 cut(s)	262, 1122
Ple19I	CGATCG	1 cut(s)	121
PleI	GAGTC	3 cut(s)	205, 388, 1987
PpsI	GAGTC	3 cut(s)	205, 388, 1987
PpuMI	RGGWCCY	4 cut(s)	373, 1795, 1909, 2075
PscI	ACATGT	1 cut(s)	284
PshBI	ATTAAT	1 cut(s)	2141
PsiI	TTATAA	1 cut(s)	834
Psp5II	RGGWCCY	4 cut(s)	373, 1795, 1909, 2075
Psp6I	CCWGG	3 cut(s)	652, 1122, 2404
PspEI	GGTNACC	2 cut(s)	1107, 1204
PspFI	CCCAGC	3 cut(s)	319, 699, 1031
PspGI	CCWGG	3 cut(s)	652, 1122, 2404
PspPI	GGNCC	7 cut(s)	373, 413, 1167, 1795, 1909, 2028, 2075
PspPPI	RGGWCCY	4 cut(s)	373, 1795, 1909, 2075
PsrI	GAACNNNNNNTAC	2 cut(s)	1477, 1509
PstI	CTGCAG	1 cut(s)	963
PsuI	RGATCY	8 cut(s)	259, 407, 755, 870, 1390, 1805, 2295, 2408
PvuI	CGATCG	1 cut(s)	121
RsaI	GTAC	5 cut(s)	104, 420, 747, 929, 2137
RsaNI	GTAC	5 cut(s)	103, 419, 746, 928, 2136
RseI	CAYNNNNRTG	3 cut(s)	171, 1604, 1768
SapI	GCTCTTC	1 cut(s)	1761
Sau96I	GGNCC	7 cut(s)	373, 413, 1167, 1795, 1909, 2028, 2075
ScaI	AGTACT	1 cut(s)	104
SchI	GAGTC	3 cut(s)	206, 388, 1988
ScrFI	CCNGG	7 cut(s)	264, 654, 901, 902, 1124, 2031, 2406
SfcI	CTRYAG	1 cut(s)	959
SfuI	TTCGAA	1 cut(s)	1883
SinI	GGWCC	5 cut(s)	373, 413, 1795, 1909, 2075
SmaI	CCCGGG	1 cut(s)	902
SmiMI	CAYNNNNRTG	3 cut(s)	171, 1604, 1768
SmlI	CTYRAG	4 cut(s)	368, 1563, 1824, 2300
SmoI	CTYRAG	4 cut(s)	368, 1563, 1824, 2300
SseBI	AGGCCT	3 cut(s)	886, 1076, 1569
SsiI	CCGC	8 cut(s)	85, 211, 805, 874, 1036, 2128, 2149, 2421
SspI	AATATT	1 cut(s)	543
SspMI	CTAG	6 cut(s)	888, 936, 1023, 1395, 1958, 2064
StuI	AGGCCT	3 cut(s)	886, 1076, 1569
StyD4I	CCNGG	7 cut(s)	262, 652, 899, 900, 1122, 2029, 2404
StyI	CCWWGG	3 cut(s)	24, 422, 555
TaaI	ACNGT	8 cut(s)	729, 741, 1484, 1603, 1876, 2119, 2166, 2633
TaiI	ACGT	1 cut(s)	1533
TaqI	TCGA	6 cut(s)	948, 1005, 1261, 1883, 2577, 2601
TatI	WGTACW	1 cut(s)	102
TauI	GCSGC	5 cut(s)	88, 808, 2130, 2152, 2424
TfiI	GAWTC	5 cut(s)	150, 851, 1127, 1699, 2414
TscAI	CASTG	6 cut(s)	538, 769, 1449, 1606, 1709, 2124
TseFI	GTSAC	5 cut(s)	239, 1241, 1249, 1980, 2517
TseI	GCWGC	9 cut(s)	176, 958, 961, 1820, 1898, 2200, 2467, 2528, 2622
Tsp45I	GTSAC	5 cut(s)	239, 1241, 1249, 1980, 2517
TspGWI	ACGGA	3 cut(s)	1371, 1853, 2123
TspMI	CCCGGG	1 cut(s)	900
TspRI	CASTG	6 cut(s)	538, 769, 1449, 1606, 1709, 2124
Van91I	CCANNNNNTGG	2 cut(s)	390, 1655
Vha464I	CTTAAG	1 cut(s)	368
VpaK11BI	GGWCC	5 cut(s)	373, 413, 1795, 1909, 2075
VspI	ATTAAT	1 cut(s)	2141
XagI	CCTNNNNNAGG	1 cut(s)	2352
XapI	RAATTY	3 cut(s)	578, 982, 1786
XceI	RCATGY	2 cut(s)	288, 2097
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1231, 2063
XmaI	CCCGGG	1 cut(s)	900
XmiI	GTMKAC	2 cut(s)	380, 731
XmnI	GAANNNNTTC	2 cut(s)	1303, 1845
XspI	CTAG	6 cut(s)	888, 936, 1023, 1395, 1958, 2064
ZrmI	AGTACT	1 cut(s)	104
Zsp2I	ATGCAT	1 cut(s)	230

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.