Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0005133

Physical Location & Seq

Genomic Coordinates Forward (+)

5175021 .. 5183373

Gene Structure 8353 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G004990.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2703 bp

ATGTCGCCGTCGTCGTCGTCGTCTTCTTCCAAGTGCTGCTACAATTCCGAGTGCGGCGAATTGAAGCCGGAGCACCCGAGGAAGGCCTGGCGCCTCCGCACCGGAGACTTCGCCGAGCTCTGCGATCGATGCGCCCTCATTTATGAAGAAGGAAGATTTTGTGAGACTTTTCATGTGAAAGCTTCTGGGTGGAGGTGTTGTGAGTCGTGTGGAAAGCGGGTTCATTGTGGATGTATCGTTTCAGCTCAAGCCTTTACCTTGTTGGATCCTGGAGGGATTGAGTGCGTAACATGTGCAAGGAAACATATTGTTTTGACATCAAATCCAGCATGGGCACCAACTTTGTTCTTTCATTCACCTTTATCTGATAGACTGAAGGACATGTCTGGCAAAAATTGGACTCAGTTGGCTGGATCTGGGCCTGTACCATGGAGGCAAGCACCCAGTTTATTCAATTCTTCAATTTCTTCATCTGAATTGCATGGGAGGTTGCCATATGATGTTGATGGTTCAATGGGAATTAATAATAAACTTAATGCCGGTGAAAGAGTATCAGTCCATCCCTTGGAAAAGAAGAAAGCCGAGGATTTTTCTGAAAGATTAATGAAAGTGAACCTTGCAATTGGCACACCAGTTAGTTTTGAAAATGGGAATTCAGGAAATAAATGCATGGAGCAAAGCAGTTCATGTTTAAATATATCTCAACAGCCTGCCTCTTTGAAGGAGGAACCATCTACTCCACAGTTTGTCCTGTCTGTACCTTATGTATCAGCAAGTGAAACAAATGGTCAAGTGGTAGTTACGGGAACCAATTTGCGGCCTGCCCTTCCTATGGTAAAGCAGTTCAATGGTACTTTACATAATGGAGTTGAATTGTCTGGTGATACTCAGATCCGCAATGCAAGGCCTCGAGCAGATGCACGGGGAAGAAGTCCGTTACTTCCACGGTACTGGCCTAGATTTACTGATCAAGAGCTACAGCAAATGTCTGGAGATTCAAATTCTGTCATTACTCCATTATTTGAGAAAATGCTGAGCGCAAGTGATGCTGGGAGGATTGGACGTCTGGTGTTGCCAAAAAAGTGTGCAGAGGCCTACTTCCCACCGATTTCTCAGCCTGAAGGATTACCGCTTAAAGTCCAAGATTCGAAAGGCAAGGAATGGGTATTTCAGTTTCGCTTCTGGCCCAACAATAATAGCAGAATGTATGTTTTGGAGGGGGTTACTCCTTGCATACAATCCATGCAATTGCAAGCAGGCGACATAGTGACATTCAGTCGATTAGAGCCCGGAGGGAAATTGGTTATGGGGTGCAGAAGGGCTTCAACTGCCCCATCTGATCAGGAAAATGATACAAACAAGATGGGGAATGGAGTTTCAGCCCATGTAGATGTTAGTATAACAGATACCAAATCTGGTGAAGTTTTTTCAAATGCTGAATTGGCAGATCCTAGTACATTTCCCAAAGGTGATAAGTCAAGTTACATATCAAGAGAAGTAGAGGGAGCTAAATCTTTGATCTCTCGAAAAAGGAAAAATAGCAACTTGGGGTCTAAGAGTAAGCGCCTGAGAATTGAAAAGGAAGATCTGATAGAGCTGAAGATAACATGGGAAGAAGCTCAAGGACTGCTTCGCCCTCCTCCTAACCATGTTCCTACTGTTGTGGTGATTGAAGGTTTTGAGTTTGAGGAATATGAGGATGGTCCAATTCTTGGGAAGCCGACACTTTATGCTACAGGAAGTAAAGGTGAGAAGATTCAATGGGCACAATGTGAAGTCTGTTGTAAGTGGCGCAAATTGCCTGTTAATGCCCTTCTTCCCTCAAAGTGGACTTGCTCAGATAACTCATGGGACCCTGATAGGTCATTGTGTTCAGCAGCTCAAGAGTTGACAACAGAACAGCTTGAAGATCTGCTTCCCGGTTGTAATTTAGTTGCTCCTAAGAAAATAAAGGCTGCTAAACAGGACCCAGATAACATTGAAGCTTTGGAGGGGCTTGATACACTTGCAAACCTAGCTATCTTGGGAGAAGGTGAGTCACTCCCAGCATCAGCTCAGGCCACAACAAAGCACCCCCGACATAGGCCCGGATGCTCATGCATTGTCTGCATCCAGCCCCCTAGTGGGAAGGGTCCTAAACACAAGCAAACGTGCATCTGCAATGTATGCTCAACAGTGAAGCGCCGGTTCCGTACGTTAATGATGCGGCGCGAGAAGAATAAGTCGGAGAAAGAAGCAGAAACTACACGCAAAAAGCAGCAGCAACAGCAATTACTAGACGATGAGACCCTCTTATGTGGTAACGCAGGAAGTAGCAGTCCAAACAACAAAGTGGAGGTCCTTGAGCTTTCTGATGATGACTTTAACAGGACGAAATCTCCAACTCCACCTTATAAAGGCCAAATTGACCTGAATATCCAGCCAGAGCGGGAGGAAGATCTATCACCTGGCTCAGATTCTGGTGGCGTGATAAAGTTGCTCCAAGATGCCACAGAAAGGTATCTCAGGCAGCAGAGGCAGAGTTTGTCAACCTCTGGTGGTGGTGAAAGATCAATGGGCAACAAGTCGCAGCGAGCTGGAGGTGAAGCAGGGGGAGAACCACTTGGCAACATTGCAATTCTTGGGAATAGCAATCATGATAGTGGCAATGATCATCCTGCAACTTTATCTGTCAAAGCTTCAGCTTCCATGACAGCTACGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B3 zf-CW

Protein Analysis

900

Amino Acids

98.52

Weight (kDa)

8.08

Isoelectric Point (pI)

49.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf_VAL1_N	PF25813	56 - 103	5.1e-22	VAL1-like, N-terminal zinc finger domain
B3	PF02362	341 - 441	2.8e-16	B3 DNA binding domain
zf-CW	PF07496	587 - 629	2.5e-09	CW-type Zinc Finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21550 AT4G21550 AT4G21550
fragaria_vesca	FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120
malus_domestica	MD05G1324700.v1.1 MD10G1302500.v1.1
prunus_persica	Prupe.4G036100_v2.0.a1
pyrus_communis	pycom05g29890 pycom10g25500
rosa_chinensis	RchiOBHm_Chr5g0006571
rosa_laevigata	RLG00000031400
rosa_multiflora	Rmu_sc0007807.1_g000001 Rmu_sc0011154.1_g000008 Rmu_sc0011154.1_g000009
rosa_roxburghii	Rroxscaffold_1G00069470
rosa_rugosa	Rorug04G0422600.1 Rorug04G0422700
rosa_samantha	Rh5AG049800 Rh5BG049100 Rh5CG057400 Rh5DG048500
rosa_wichuraiana	Rw5G004990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2394
AatII	GACGTC	1 cut(s)	1066
AccB1I	GGYRCC	2 cut(s)	90, 334
AccB7I	CCANNNNNTGG	2 cut(s)	565, 1712
AccBSI	CCGCTC	1 cut(s)	2428
AccII	CGCG	1 cut(s)	2211
AciI	CCGC	8 cut(s)	54, 97, 217, 817, 895, 1130, 2206, 2428
AclWI	GGATC	5 cut(s)	260, 273, 421, 886, 1442
AcsI	RAATTY	2 cut(s)	652, 1000
AcuI	CTGAAG	4 cut(s)	395, 1140, 1619, 2664
AcyI	GRCGYC	2 cut(s)	91, 1063
AdeI	CACNNNGTG	1 cut(s)	1772
AfaI	GTAC	6 cut(s)	426, 759, 853, 950, 1456, 2194
AflIII	ACRYGT	2 cut(s)	290, 381
AhdI	GACNNNNNGTC	1 cut(s)	1275
AjnI	CCWGG	3 cut(s)	86, 268, 2446
AloI	GAACNNNNNNTCC	2 cut(s)	204, 236
Alw21I	GWGCWC	2 cut(s)	75, 120
Alw26I	GTCTC	3 cut(s)	99, 158, 2279
AlwI	GGATC	5 cut(s)	260, 273, 421, 886, 1442
AlwNI	CAGNNNCTG	1 cut(s)	2459
Ama87I	CYCGRG	2 cut(s)	76, 909
ApeKI	GCWGC	7 cut(s)	36, 1877, 1955, 2257, 2260, 2509, 2569
ApoI	RAATTY	2 cut(s)	652, 1000
ArsI	GACNNNNNNTTYG	2 cut(s)	2322, 2354
AseI	ATTAAT	2 cut(s)	522, 602
Asp700I	GAANNNNTTC	1 cut(s)	1321
AspLEI	GCGC	7 cut(s)	93, 134, 1040, 1566, 1794, 2184, 2211
AspS9I	GGNCC	8 cut(s)	419, 1185, 1703, 1852, 1966, 2085, 2132, 2338
AsuC2I	CCSGG	3 cut(s)	1290, 1920, 2088
AsuII	TTCGAA	1 cut(s)	1148
AvaI	CYCGRG	2 cut(s)	76, 909
AvaII	GGWCC	5 cut(s)	1703, 1852, 1966, 2132, 2338
BaeGI	GKGCMC	2 cut(s)	337, 1768
BamHI	GGATCC	1 cut(s)	265
BanI	GGYRCC	2 cut(s)	90, 334
BanII	GRGCYC	2 cut(s)	120, 1290
BbsI	GAAGAC	1 cut(s)	15
Bbv12I	GWGCWC	2 cut(s)	75, 120
BbvI	GCAGC	7 cut(s)	23, 1889, 1942, 2269, 2272, 2521, 2581
BccI	CCATC	6 cut(s)	500, 567, 739, 1342, 1357, 1694
BciT130I	CCWGG	3 cut(s)	88, 270, 2448
BclI	TGATCA	3 cut(s)	967, 1339, 2650
BcnI	CCSGG	3 cut(s)	1290, 1920, 2088
BcoDI	GTCTC	3 cut(s)	99, 158, 2279
BfaI	CTAG	5 cut(s)	957, 1452, 2015, 2121, 2276
BfmI	CTRYAG	2 cut(s)	977, 1734
BfoI	RGCGCY	3 cut(s)	94, 1567, 2185
BglII	AGATCT	3 cut(s)	1585, 1909, 2437
BlpI	GCTNAGC	1 cut(s)	1034
Bme1390I	CCNGG	6 cut(s)	88, 270, 1290, 1920, 2088, 2448
Bme18I	GGWCC	5 cut(s)	1703, 1852, 1966, 2132, 2338
BmeRI	GACNNNNNGTC	1 cut(s)	1275
BmeT110I	CYCGRG	2 cut(s)	76, 909
BmgT120I	GGNCC	8 cut(s)	419, 1185, 1703, 1852, 1966, 2085, 2132, 2338
BmrFI	CCNGG	6 cut(s)	88, 270, 1290, 1920, 2088, 2448
BmrI	ACTGGG	1 cut(s)	438
BmsI	GCATC	9 cut(s)	119, 907, 1036, 2057, 2081, 2118, 2163, 2193, 2476
BmuI	ACTGGG	1 cut(s)	438
BpiI	GAAGAC	1 cut(s)	15
BpmI	CTGGAG	3 cut(s)	291, 1011, 2598
Bpu10I	CCTNAGC	1 cut(s)	2055
Bpu1102I	GCTNAGC	1 cut(s)	1034
Bpu14I	TTCGAA	1 cut(s)	1148
BpuEI	CTTGAG	4 cut(s)	231, 1605, 1866, 2363
BpuMI	CCSGG	3 cut(s)	1290, 1920, 2088
Bsa29I	ATCGAT	1 cut(s)	127
BsaAI	YACGTR	1 cut(s)	2700
BsaHI	GRCGYC	2 cut(s)	91, 1063
BsaI	GGTCTC	1 cut(s)	2279
BsaJI	CCNNGG	5 cut(s)	77, 428, 564, 582, 944
BsaWI	WCCGGW	1 cut(s)	101
BsaXI	ACNNNNNCTCC	4 cut(s)	184, 214, 2362, 2392
Bse118I	RCCGGY	2 cut(s)	539, 2184
Bse1I	ACTGG	3 cut(s)	444, 632, 956
Bse3DI	GCAATG	4 cut(s)	904, 2167, 2610, 2653
BseBI	CCWGG	3 cut(s)	88, 270, 2448
BseCI	ATCGAT	1 cut(s)	127
BseDI	CCNNGG	5 cut(s)	77, 428, 564, 582, 944
BseGI	GGATG	6 cut(s)	236, 559, 1705, 2096, 2109, 2653
BseMI	GCAATG	4 cut(s)	904, 2167, 2610, 2653
BseMII	CTCAG	9 cut(s)	416, 902, 1025, 1127, 1559, 1851, 2069, 2466, 2518
BseNI	ACTGG	3 cut(s)	444, 632, 956
BseRI	GAGGAG	1 cut(s)	1629
BseSI	GKGCMC	2 cut(s)	337, 1768
BseXI	GCAGC	7 cut(s)	23, 1889, 1942, 2269, 2272, 2521, 2581
BseYI	CCCAGC	2 cut(s)	1049, 2044
BsgI	GTGCAG	2 cut(s)	1107, 1333
Bsh1236I	CGCG	1 cut(s)	2211
Bsh1285I	CGRYCG	1 cut(s)	127
BshNI	GGYRCC	2 cut(s)	90, 334
BshVI	ATCGAT	1 cut(s)	127
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	2 cut(s)	75, 120
BsiHKCI	CYCGRG	2 cut(s)	76, 909
BsiSI	CCGG	7 cut(s)	68, 102, 540, 1290, 1920, 2088, 2185
BsiWI	CGTACG	1 cut(s)	2192
BslFI	GGGAC	1 cut(s)	1865
BsmAI	GTCTC	3 cut(s)	99, 158, 2279
BsmFI	GGGAC	1 cut(s)	1865
Bso31I	GGTCTC	1 cut(s)	2279
BsoBI	CYCGRG	2 cut(s)	76, 909
Bsp119I	TTCGAA	1 cut(s)	1148
Bsp1286I	GDGCHC	5 cut(s)	75, 120, 337, 1290, 1768
Bsp1720I	GCTNAGC	1 cut(s)	1034
Bsp19I	CCATGG	1 cut(s)	428
BspACI	CCGC	8 cut(s)	54, 97, 217, 817, 895, 1130, 2206, 2428
BspCNI	CTCAG	9 cut(s)	415, 901, 1026, 1126, 1560, 1850, 2068, 2465, 2517
BspDI	ATCGAT	1 cut(s)	127
BspFNI	CGCG	1 cut(s)	2211
BspHI	TCATGA	1 cut(s)	2635
BspPI	GGATC	5 cut(s)	260, 273, 421, 886, 1442
BspT104I	TTCGAA	1 cut(s)	1148
BspT107I	GGYRCC	2 cut(s)	90, 334
BspTNI	GGTCTC	1 cut(s)	2279
BsrBI	CCGCTC	1 cut(s)	2428
BsrDI	GCAATG	4 cut(s)	904, 2167, 2610, 2653
BsrFI	RCCGGY	2 cut(s)	539, 2184
BsrI	ACTGG	3 cut(s)	444, 632, 956
BssAI	RCCGGY	2 cut(s)	539, 2184
BssECI	CCNNGG	5 cut(s)	77, 428, 564, 582, 944
BssNI	GRCGYC	2 cut(s)	91, 1063
BssT1I	CCWWGG	2 cut(s)	428, 564
Bst2UI	CCWGG	3 cut(s)	88, 270, 2448
Bst4CI	ACNGT	4 cut(s)	744, 948, 1660, 2176
BstACI	GRCGYC	2 cut(s)	91, 1063
BstAPI	GCANNNNNTGC	3 cut(s)	1046, 2106, 2166
BstBAI	YACGTR	1 cut(s)	2700
BstBI	TTCGAA	1 cut(s)	1148
BstC8I	GCNNGC	6 cut(s)	438, 711, 822, 1254, 1258, 2574
BstDSI	CCRYGG	2 cut(s)	428, 944
BstENI	CCTNNNNNAGG	1 cut(s)	2394
BstF5I	GGATG	6 cut(s)	236, 559, 1705, 2096, 2109, 2653
BstFNI	CGCG	1 cut(s)	2211
BstH2I	RGCGCY	3 cut(s)	94, 1567, 2185
BstHHI	GCGC	7 cut(s)	93, 134, 1040, 1566, 1794, 2184, 2211
BstMAI	GTCTC	3 cut(s)	99, 158, 2279
BstMCI	CGRYCG	1 cut(s)	127
BstNI	CCWGG	3 cut(s)	88, 270, 2448
BstNSI	RCATGY	2 cut(s)	294, 385
BstSCI	CCNGG	6 cut(s)	86, 268, 1288, 1918, 2086, 2446
BstSFI	CTRYAG	2 cut(s)	977, 1734
BstSLI	GKGCMC	2 cut(s)	337, 1768
BstUI	CGCG	1 cut(s)	2211
BstV1I	GCAGC	7 cut(s)	23, 1889, 1942, 2269, 2272, 2521, 2581
BstV2I	GAAGAC	1 cut(s)	15
BstX2I	RGATCY	7 cut(s)	265, 413, 891, 1447, 1585, 1909, 2437
BstXI	CCANNNNNNTGG	1 cut(s)	951
BstYI	RGATCY	7 cut(s)	265, 413, 891, 1447, 1585, 1909, 2437
Bsu15I	ATCGAT	1 cut(s)	127
BsuTUI	ATCGAT	1 cut(s)	127
BtgI	CCRYGG	2 cut(s)	428, 944
BtsCI	GGATG	6 cut(s)	236, 559, 1705, 2096, 2109, 2653
BtsIMutI	CAGTG	1 cut(s)	2181
Cac8I	GCNNGC	6 cut(s)	438, 711, 822, 1254, 1258, 2574
CaiI	CAGNNNCTG	1 cut(s)	2459
CciI	TCATGA	1 cut(s)	2635
CfoI	GCGC	7 cut(s)	93, 134, 1040, 1566, 1794, 2184, 2211
Cfr10I	RCCGGY	2 cut(s)	539, 2184
Cfr13I	GGNCC	8 cut(s)	419, 1185, 1703, 1852, 1966, 2085, 2132, 2338
ClaI	ATCGAT	1 cut(s)	127
Csp6I	GTAC	6 cut(s)	425, 758, 852, 949, 1455, 2193
CviQI	GTAC	6 cut(s)	425, 758, 852, 949, 1455, 2193
DinI	GGCGCC	1 cut(s)	92
DraI	TTTAAA	1 cut(s)	693
DraIII	CACNNNGTG	1 cut(s)	1772
DriI	GACNNNNNGTC	1 cut(s)	1275
Eam1105I	GACNNNNNGTC	1 cut(s)	1275
Ecl136II	GAGCTC	1 cut(s)	118
Eco130I	CCWWGG	2 cut(s)	428, 564
Eco147I	AGGCCT	3 cut(s)	86, 907, 1094
Eco24I	GRGCYC	2 cut(s)	120, 1290
Eco31I	GGTCTC	1 cut(s)	2279
Eco47I	GGWCC	5 cut(s)	1703, 1852, 1966, 2132, 2338
Eco53kI	GAGCTC	1 cut(s)	118
Eco57I	CTGAAG	4 cut(s)	395, 1140, 1619, 2664
Eco88I	CYCGRG	2 cut(s)	76, 909
EcoICRI	GAGCTC	1 cut(s)	118
EcoNI	CCTNNNNNAGG	1 cut(s)	2394
EcoO109I	RGGNCCY	4 cut(s)	1852, 1966, 2132, 2338
EcoRI	GAATTC	1 cut(s)	652
EcoRII	CCWGG	3 cut(s)	86, 268, 2446
EcoT14I	CCWWGG	2 cut(s)	428, 564
EcoT22I	ATGCAT	2 cut(s)	671, 2102
EcoT38I	GRGCYC	2 cut(s)	120, 1290
EgeI	GGCGCC	1 cut(s)	92
EheI	GGCGCC	1 cut(s)	92
ErhI	CCWWGG	2 cut(s)	428, 564
FalI	AAGNNNNNCTT	6 cut(s)	600, 632, 1614, 1646, 1899, 1931
FaqI	GGGAC	1 cut(s)	1865
FauI	CCCGC	2 cut(s)	210, 2421
FauNDI	CATATG	1 cut(s)	496
FbaI	TGATCA	3 cut(s)	967, 1339, 2650
FokI	GGATG	6 cut(s)	243, 546, 1712, 2096, 2103, 2640
FriOI	GRGCYC	2 cut(s)	120, 1290
FspBI	CTAG	5 cut(s)	957, 1452, 2015, 2121, 2276
GlaI	GCGC	7 cut(s)	92, 133, 1039, 1565, 1793, 2183, 2210
GsaI	CCCAGC	2 cut(s)	1053, 2048
GsuI	CTGGAG	3 cut(s)	291, 1011, 2598
HaeII	RGCGCY	3 cut(s)	94, 1567, 2185
HapII	CCGG	7 cut(s)	68, 102, 540, 1290, 1920, 2088, 2185
HhaI	GCGC	7 cut(s)	93, 134, 1040, 1566, 1794, 2184, 2211
Hin1I	GRCGYC	2 cut(s)	91, 1063
Hin6I	GCGC	7 cut(s)	91, 132, 1038, 1564, 1792, 2182, 2209
HinP1I	GCGC	7 cut(s)	91, 132, 1038, 1564, 1792, 2182, 2209
HincII	GTYRAC	2 cut(s)	1890, 2529
HindII	GTYRAC	2 cut(s)	1890, 2529
HindIII	AAGCTT	3 cut(s)	180, 1983, 2676
HinfI	GANTC	7 cut(s)	203, 400, 995, 1145, 1756, 2036, 2456
HpaII	CCGG	7 cut(s)	68, 102, 540, 1290, 1920, 2088, 2185
Hpy166II	GTNNAC	4 cut(s)	613, 1830, 1890, 2529
Hpy188III	TCNNGA	8 cut(s)	657, 971, 990, 1343, 1491, 1524, 1883, 2636
Hpy8I	GTNNAC	4 cut(s)	613, 1830, 1890, 2529
Hpy99I	CGWCG	4 cut(s)	13, 16, 19, 22
HpyCH4III	ACNGT	4 cut(s)	744, 948, 1660, 2176
HpyCH4IV	ACGT	4 cut(s)	1063, 2150, 2195, 2699
HpySE526I	ACGT	4 cut(s)	1063, 2150, 2195, 2699
Hsp92I	GRCGYC	2 cut(s)	91, 1063
HspAI	GCGC	7 cut(s)	91, 132, 1038, 1564, 1792, 2182, 2209
KasI	GGCGCC	1 cut(s)	90
KflI	GGGWCCC	1 cut(s)	1852
Ksp22I	TGATCA	3 cut(s)	967, 1339, 2650
LmnI	GCTCC	5 cut(s)	70, 673, 1505, 1942, 2484
Lsp1109I	GCAGC	7 cut(s)	23, 1889, 1942, 2269, 2272, 2521, 2581
LweI	GCATC	9 cut(s)	119, 907, 1036, 2057, 2081, 2118, 2163, 2193, 2476
MaeI	CTAG	5 cut(s)	957, 1452, 2015, 2121, 2276
MaeII	ACGT	4 cut(s)	1063, 2150, 2195, 2699
MaeIII	GTNAC	8 cut(s)	286, 799, 936, 1222, 1267, 1481, 2037, 2300
MbiI	CCGCTC	1 cut(s)	2428
MfeI	CAATTG	2 cut(s)	621, 1247
MflI	RGATCY	7 cut(s)	265, 413, 891, 1447, 1585, 1909, 2437
MhlI	GDGCHC	5 cut(s)	75, 120, 337, 1290, 1768
Mly113I	GGCGCC	1 cut(s)	91
MlyI	GAGTC	3 cut(s)	212, 394, 2045
MmeI	TCCRAC	3 cut(s)	243, 2205, 2405
Mph1103I	ATGCAT	2 cut(s)	671, 2102
MroXI	GAANNNNTTC	1 cut(s)	1321
MseI	TTAA	8 cut(s)	522, 534, 602, 692, 1134, 1806, 2198, 2364
MslI	CAYNNNNRTG	2 cut(s)	1389, 2640
MspI	CCGG	7 cut(s)	68, 102, 540, 1290, 1920, 2088, 2185
MspR9I	CCNGG	6 cut(s)	88, 270, 1290, 1920, 2088, 2448
MunI	CAATTG	2 cut(s)	621, 1247
MvaI	CCWGG	3 cut(s)	88, 270, 2448
MvnI	CGCG	1 cut(s)	2211
NarI	GGCGCC	1 cut(s)	91
NciI	CCSGG	3 cut(s)	1290, 1920, 2088
NcoI	CCATGG	1 cut(s)	428
NdeI	CATATG	1 cut(s)	496
NmeAIII	GCCGAG	2 cut(s)	139, 607
NmuCI	GTSAC	2 cut(s)	1267, 2037
NsiI	ATGCAT	2 cut(s)	671, 2102
NspI	RCATGY	2 cut(s)	294, 385
NspV	TTCGAA	1 cut(s)	1148
PaeR7I	CTCGAG	1 cut(s)	909
PagI	TCATGA	1 cut(s)	2635
PceI	AGGCCT	3 cut(s)	86, 907, 1094
PciI	ACATGT	2 cut(s)	290, 381
PcsI	WCGNNNNNNNCGW	2 cut(s)	11, 17
PdmI	GAANNNNTTC	1 cut(s)	1321
PfeI	GAWTC	4 cut(s)	995, 1145, 1756, 2456
Pfl23II	CGTACG	1 cut(s)	2192
PflMI	CCANNNNNTGG	2 cut(s)	565, 1712
PfoI	TCCNGGA	1 cut(s)	268
Ple19I	CGATCG	1 cut(s)	127
PleI	GAGTC	3 cut(s)	211, 394, 2044
PluTI	GGCGCC	1 cut(s)	94
PpsI	GAGTC	3 cut(s)	211, 394, 2044
Ppu21I	YACGTR	1 cut(s)	2700
PpuMI	RGGWCCY	4 cut(s)	1852, 1966, 2132, 2338
PscI	ACATGT	2 cut(s)	290, 381
PshBI	ATTAAT	2 cut(s)	522, 602
PsiI	TTATAA	1 cut(s)	2394
Psp124BI	GAGCTC	1 cut(s)	120
Psp5II	RGGWCCY	4 cut(s)	1852, 1966, 2132, 2338
Psp6I	CCWGG	3 cut(s)	86, 268, 2446
PspFI	CCCAGC	2 cut(s)	1049, 2044
PspGI	CCWGG	3 cut(s)	86, 268, 2446
PspLI	CGTACG	1 cut(s)	2192
PspPI	GGNCC	8 cut(s)	419, 1185, 1703, 1852, 1966, 2085, 2132, 2338
PspPPI	RGGWCCY	4 cut(s)	1852, 1966, 2132, 2338
PspXI	VCTCGAGB	1 cut(s)	909
PstNI	CAGNNNCTG	1 cut(s)	2459
PsuI	RGATCY	7 cut(s)	265, 413, 891, 1447, 1585, 1909, 2437
PvuI	CGATCG	1 cut(s)	127
RsaI	GTAC	6 cut(s)	426, 759, 853, 950, 1456, 2194
RsaNI	GTAC	6 cut(s)	425, 758, 852, 949, 1455, 2193
RseI	CAYNNNNRTG	2 cut(s)	1389, 2640
SacI	GAGCTC	1 cut(s)	120
SaqAI	TTAA	8 cut(s)	522, 534, 602, 692, 1134, 1806, 2198, 2364
Sau96I	GGNCC	8 cut(s)	419, 1185, 1703, 1852, 1966, 2085, 2132, 2338
SchI	GAGTC	3 cut(s)	212, 394, 2045
ScrFI	CCNGG	6 cut(s)	88, 270, 1290, 1920, 2088, 2448
SduI	GDGCHC	5 cut(s)	75, 120, 337, 1290, 1768
SfaNI	GCATC	9 cut(s)	119, 907, 1036, 2057, 2081, 2118, 2163, 2193, 2476
SfcI	CTRYAG	2 cut(s)	977, 1734
SfoI	GGCGCC	1 cut(s)	92
Sfr274I	CTCGAG	1 cut(s)	909
SfuI	TTCGAA	1 cut(s)	1148
SinI	GGWCC	5 cut(s)	1703, 1852, 1966, 2132, 2338
SlaI	CTCGAG	1 cut(s)	909
SmiMI	CAYNNNNRTG	2 cut(s)	1389, 2640
SmlI	CTYRAG	5 cut(s)	246, 909, 1620, 1881, 2342
SmoI	CTYRAG	5 cut(s)	246, 909, 1620, 1881, 2342
SseBI	AGGCCT	3 cut(s)	86, 907, 1094
SsiI	CCGC	8 cut(s)	54, 97, 217, 817, 895, 1130, 2206, 2428
SspDI	GGCGCC	1 cut(s)	90
SspMI	CTAG	5 cut(s)	957, 1452, 2015, 2121, 2276
SstI	GAGCTC	1 cut(s)	120
StuI	AGGCCT	3 cut(s)	86, 907, 1094
StyD4I	CCNGG	6 cut(s)	86, 268, 1288, 1918, 2086, 2446
StyI	CCWWGG	2 cut(s)	428, 564
TaaI	ACNGT	4 cut(s)	744, 948, 1660, 2176
TaiI	ACGT	4 cut(s)	1066, 2153, 2198, 2702
TaqI	TCGA	5 cut(s)	127, 910, 1148, 1279, 1525
TatI	WGTACW	1 cut(s)	1454
TauI	GCSGC	3 cut(s)	57, 820, 2209
TfiI	GAWTC	4 cut(s)	995, 1145, 1756, 2456
Tru1I	TTAA	8 cut(s)	522, 534, 602, 692, 1134, 1806, 2198, 2364
Tru9I	TTAA	8 cut(s)	522, 534, 602, 692, 1134, 1806, 2198, 2364
TscAI	CASTG	1 cut(s)	2181
TseFI	GTSAC	2 cut(s)	1267, 2037
TseI	GCWGC	7 cut(s)	36, 1877, 1955, 2257, 2260, 2509, 2569
Tsp45I	GTSAC	2 cut(s)	1267, 2037
TspDTI	ATGAA	7 cut(s)	159, 161, 212, 341, 459, 620, 675
TspGWI	ACGGA	2 cut(s)	924, 2180
TspRI	CASTG	1 cut(s)	2181
Van91I	CCANNNNNTGG	2 cut(s)	565, 1712
VpaK11BI	GGWCC	5 cut(s)	1703, 1852, 1966, 2132, 2338
VspI	ATTAAT	2 cut(s)	522, 602
XagI	CCTNNNNNAGG	1 cut(s)	2394
XapI	RAATTY	2 cut(s)	652, 1000
XceI	RCATGY	2 cut(s)	294, 385
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2120
XhoI	CTCGAG	1 cut(s)	909
XmnI	GAANNNNTTC	1 cut(s)	1321
XspI	CTAG	5 cut(s)	957, 1452, 2015, 2121, 2276
ZraI	GACGTC	1 cut(s)	1064
Zsp2I	ATGCAT	2 cut(s)	671, 2102

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.