Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0005133

Physical Location & Seq

Genomic Coordinates Forward (+)

4236480 .. 4245016

Gene Structure 8537 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG057400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGTCGCCGTCGTCGTCGTCGTCTTCTTCCAAGTGCTGCTACAATTCCGAGTGCGGCGAATTGAAGCCGGAGCACCCGAGGAAGGCCTGGCGCCTCCGCACCGGAGACTTCGCCGAGCTCTGCGATCGATGCGCCCTCATTTATGAAGAAGGAAGATTTTGTGAGACTTTTCATGTGAAAGCTTCTGGGTGGAGGTGTTGTGAGTCGTGTGGAAAGCGGGTTCATTGTGGATGTATCGTTTCAGCTCAAGCCTTTACCTTGTTGGATCCTGGAGGGATTGAGTGCGTAACATGTGCAAGGAAACATATTGTTTTGACATCAAATCCAGCATGGGCACCAACTTTGTTCTTTCATTCACCTTTATCTGATAGACTGAAGGACATGTCTGGCAAAAATTGGACTCAGTTGGCTGGATCTGGTCCTGTACCATGGAGGCAAGCACCCAGTTTATTCAATTCTTCAATTTCTTCATCTGAATTGCATGGGAGGTTGCCATATGATGTTGATGGTTCAATGGGAATTAATAATAAACTTAATGCCGGTGAAAGAGTATCAGTCCATCCCTTGGAAAAGAAGAAAGCCGAGGATTTTTCTGAAAGATTAATGAAAGTGAACCTTGCAATTGGCACACCAGTTAGTTTTGAAAATGGGAATTCAGGAAATAAATGCATGGAGCAAAGCAGTTCATGTTTAAATATATCTCAACAGCCTGCCTCTTTGAAGGAGGAACCATCTACTCCACAGTTTGTCCTGTCTGTACCTTATGTATCAGCAAGTGAAACAAATGGTCAAACAAATGGTCAAGTGGTAGTTACGGGAACGAATTTGCGGCCTGCCCTTCCTATGGTAAAGCAGTTCAATGGTACTTTACATAATGGAGTTGAATTGTCTGGTGATACTCAGATCCGCAATGCAAGGCCTCGAGCAGATGCACGGGGAAGAAGTCCGTTACTTCCACGGTACTGGCCTAGATTTACTGATCAAGAGCTACAGCAAATGTCTGGAGATTCAAATTCTGTCATTACTCCATTATTTGAGAAAATGCTGAGCGCAAGTGATGCTGGGAGGATTGGACGTCTGGTGTTGCCAAAAAAGTGTGCAGAGGCCTACTTCCCACCGATTTCTCAGCCTGAAGGATTACCGCTTAAAGTCCAAGATTCGAAAGGCAAGGAATGGGTATTTCAGTTTCGCTTCTGGCCCAACAATAATAGCAGAATGTATGTTTTGGAGGGGGTTACTCCTTGCATACAATCCATGCAATTGCAAGCAGGCGACATAGTGACATTCAGTCGATTAGAGCCCGGAGGGAAATTGGTTATGGGGTGCAGAAGGGCTTCAACTGCCCCATCTGATCAGGAAAATGATACAAACAAGATGGGGAATGGAGTTTCAGCCCATGTAGATGTTAGTATAACAGATACCAAATCTGGTGAAGTTTTTTCAAATGCTGAATTGGCAGATCCTAGTACATTTCCCAAAGGTGATAAGTCAAGTTACATATCAAGAGAAGTAGAGGGAGCTAAATCTTTGATCTCTCGAAAAAGGAAAAATAGCAACTTGGGGTCTAAGAGTAAGCGCCTGAGAATTGAAAAGGAAGATCTGATAGAGCTGAAGATAACATGGGAAGAAGCTCAAGGACTGCTTCGCCCTCCTCCTAACCATGTTCCTACTGTTGTGGTGATTGAAGGTTTTGAGTTTGAGGAATATGAGGTACATATATTACTCCTGTTTTTTCTTGAAGGATTGACATTGCCATGTGTTCTTCATAGTTTTTCTCACTCAAATCTTCTTGTTCTCCTTGCAAGAAAGACGTACATCTTTCTATTCCATTTCTATAATTTCTGTTTCTTCTTTCCCCTTTATCACGATATAGCATGGTATTGGGTTGCGGATTACCATTTGCTACTTTATTCTGACTTCCAAAACTCAACAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0048366 GO:0048367 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B3 zf-CW

Protein Analysis

645

Amino Acids

71.93

Weight (kDa)

7.99

Isoelectric Point (pI)

43.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf_VAL1_N	PF25813	56 - 103	3.4e-22	VAL1-like, N-terminal zinc finger domain
B3	PF02362	345 - 445	1.7e-16	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005133)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21550 AT4G21550 AT4G21550
fragaria_vesca	FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120 FvH4_3g04120
malus_domestica	MD05G1324700.v1.1 MD10G1302500.v1.1
prunus_persica	Prupe.4G036100_v2.0.a1
pyrus_communis	pycom05g29890 pycom10g25500
rosa_chinensis	RchiOBHm_Chr5g0006571
rosa_laevigata	RLG00000031400
rosa_multiflora	Rmu_sc0007807.1_g000001 Rmu_sc0011154.1_g000008 Rmu_sc0011154.1_g000009
rosa_roxburghii	Rroxscaffold_1G00069470
rosa_rugosa	Rorug04G0422600.1 Rorug04G0422700
rosa_samantha	Rh5AG049800 Rh5BG049100 Rh5CG057400 Rh5DG048500
rosa_wichuraiana	Rw5G004990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1078
AccB1I	GGYRCC	2 cut(s)	90, 334
AccB7I	CCANNNNNTGG	1 cut(s)	565
AciI	CCGC	7 cut(s)	54, 97, 217, 829, 907, 1142, 1889
AclWI	GGATC	5 cut(s)	260, 273, 421, 898, 1454
AcsI	RAATTY	3 cut(s)	652, 823, 1012
AcuI	CTGAAG	3 cut(s)	395, 1152, 1631
AcyI	GRCGYC	2 cut(s)	91, 1075
AfaI	GTAC	7 cut(s)	426, 759, 865, 962, 1468, 1713, 1814
AfiI	CCNNNNNNNGG	3 cut(s)	82, 565, 844
AflIII	ACRYGT	2 cut(s)	290, 381
AhdI	GACNNNNNGTC	1 cut(s)	1287
AjnI	CCWGG	2 cut(s)	86, 268
AloI	GAACNNNNNNTCC	2 cut(s)	204, 236
AluBI	AGCT	7 cut(s)	118, 182, 245, 988, 1520, 1609, 1631
AluI	AGCT	7 cut(s)	118, 182, 245, 988, 1520, 1609, 1631
Alw21I	GWGCWC	2 cut(s)	75, 120
Alw26I	GTCTC	2 cut(s)	99, 158
AlwI	GGATC	5 cut(s)	260, 273, 421, 898, 1454
Ama87I	CYCGRG	2 cut(s)	76, 921
AoxI	GGCC	6 cut(s)	84, 830, 917, 965, 1104, 1196
ApeKI	GCWGC	1 cut(s)	36
ApoI	RAATTY	3 cut(s)	652, 823, 1012
ArsI	GACNNNNNNTTYG	2 cut(s)	784, 816
AseI	ATTAAT	2 cut(s)	522, 602
Asp700I	GAANNNNTTC	1 cut(s)	1333
AspLEI	GCGC	4 cut(s)	93, 134, 1052, 1578
AspS9I	GGNCC	2 cut(s)	419, 1197
AsuC2I	CCSGG	1 cut(s)	1302
AsuHPI	GGTGA	6 cut(s)	348, 554, 905, 1442, 1493, 1690
AsuII	TTCGAA	1 cut(s)	1160
AvaI	CYCGRG	2 cut(s)	76, 921
AvaII	GGWCC	1 cut(s)	419
BaeGI	GKGCMC	1 cut(s)	337
BamHI	GGATCC	1 cut(s)	265
BanI	GGYRCC	2 cut(s)	90, 334
BanII	GRGCYC	2 cut(s)	120, 1302
BbsI	GAAGAC	1 cut(s)	15
Bbv12I	GWGCWC	2 cut(s)	75, 120
BbvI	GCAGC	1 cut(s)	23
BccI	CCATC	5 cut(s)	500, 567, 739, 1354, 1369
BciT130I	CCWGG	2 cut(s)	88, 270
BclI	TGATCA	2 cut(s)	979, 1351
BcnI	CCSGG	1 cut(s)	1302
BcoDI	GTCTC	2 cut(s)	99, 158
BfaI	CTAG	2 cut(s)	969, 1464
BfmI	CTRYAG	1 cut(s)	989
BfoI	RGCGCY	2 cut(s)	94, 1579
BglII	AGATCT	1 cut(s)	1597
BisI	GCNGC	3 cut(s)	37, 55, 830
BlpI	GCTNAGC	1 cut(s)	1046
BlsI	GCNGC	3 cut(s)	38, 56, 831
Bme1390I	CCNGG	3 cut(s)	88, 270, 1302
Bme18I	GGWCC	1 cut(s)	419
BmeRI	GACNNNNNGTC	1 cut(s)	1287
BmeT110I	CYCGRG	2 cut(s)	76, 921
BmgT120I	GGNCC	2 cut(s)	419, 1197
BmiI	GGNNCC	4 cut(s)	92, 267, 336, 729
BmrFI	CCNGG	3 cut(s)	88, 270, 1302
BmrI	ACTGGG	1 cut(s)	438
BmsI	GCATC	3 cut(s)	119, 919, 1048
BmuI	ACTGGG	1 cut(s)	438
BpiI	GAAGAC	1 cut(s)	15
BpmI	CTGGAG	2 cut(s)	291, 1023
Bpu1102I	GCTNAGC	1 cut(s)	1046
Bpu14I	TTCGAA	1 cut(s)	1160
BpuEI	CTTGAG	2 cut(s)	231, 1617
BpuMI	CCSGG	1 cut(s)	1302
Bsa29I	ATCGAT	1 cut(s)	127
BsaHI	GRCGYC	2 cut(s)	91, 1075
BsaJI	CCNNGG	5 cut(s)	77, 428, 564, 582, 956
BsaWI	WCCGGW	1 cut(s)	101
BsaXI	ACNNNNNCTCC	2 cut(s)	184, 214
Bsc4I	CCNNNNNNNGG	3 cut(s)	82, 565, 844
Bse118I	RCCGGY	1 cut(s)	539
Bse1I	ACTGG	3 cut(s)	444, 632, 968
Bse3DI	GCAATG	2 cut(s)	916, 1748
BseBI	CCWGG	2 cut(s)	88, 270
BseCI	ATCGAT	1 cut(s)	127
BseDI	CCNNGG	5 cut(s)	77, 428, 564, 582, 956
BseGI	GGATG	2 cut(s)	236, 559
BseLI	CCNNNNNNNGG	3 cut(s)	82, 565, 844
BseMI	GCAATG	2 cut(s)	916, 1748
BseMII	CTCAG	5 cut(s)	416, 914, 1037, 1139, 1571
BseNI	ACTGG	3 cut(s)	444, 632, 968
BseRI	GAGGAG	1 cut(s)	1641
BseSI	GKGCMC	1 cut(s)	337
BseXI	GCAGC	1 cut(s)	23
BseYI	CCCAGC	1 cut(s)	1061
BsgI	GTGCAG	2 cut(s)	1119, 1345
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	6 cut(s)	86, 832, 919, 967, 1106, 1198
BshNI	GGYRCC	2 cut(s)	90, 334
BshVI	ATCGAT	1 cut(s)	127
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	2 cut(s)	75, 120
BsiHKCI	CYCGRG	2 cut(s)	76, 921
BsiSI	CCGG	4 cut(s)	68, 102, 540, 1302
BslI	CCNNNNNNNGG	3 cut(s)	82, 565, 844
BsmAI	GTCTC	2 cut(s)	99, 158
BsnI	GGCC	6 cut(s)	86, 832, 919, 967, 1106, 1198
BsoBI	CYCGRG	2 cut(s)	76, 921
Bsp119I	TTCGAA	1 cut(s)	1160
Bsp1286I	GDGCHC	4 cut(s)	75, 120, 337, 1302
Bsp143I	GATC	9 cut(s)	124, 265, 413, 903, 979, 1351, 1459, 1530, 1597
Bsp1720I	GCTNAGC	1 cut(s)	1046
Bsp19I	CCATGG	1 cut(s)	428
BspACI	CCGC	7 cut(s)	54, 97, 217, 829, 907, 1142, 1889
BspANI	GGCC	6 cut(s)	86, 832, 919, 967, 1106, 1198
BspCNI	CTCAG	5 cut(s)	415, 913, 1038, 1138, 1572
BspDI	ATCGAT	1 cut(s)	127
BspLI	GGNNCC	4 cut(s)	92, 267, 336, 729
BspPI	GGATC	5 cut(s)	260, 273, 421, 898, 1454
BspT104I	TTCGAA	1 cut(s)	1160
BspT107I	GGYRCC	2 cut(s)	90, 334
BsrDI	GCAATG	2 cut(s)	916, 1748
BsrFI	RCCGGY	1 cut(s)	539
BsrI	ACTGG	3 cut(s)	444, 632, 968
BssAI	RCCGGY	1 cut(s)	539
BssECI	CCNNGG	5 cut(s)	77, 428, 564, 582, 956
BssMI	GATC	9 cut(s)	124, 265, 413, 903, 979, 1351, 1459, 1530, 1597
BssNI	GRCGYC	2 cut(s)	91, 1075
BssT1I	CCWWGG	2 cut(s)	428, 564
Bst2UI	CCWGG	2 cut(s)	88, 270
Bst4CI	ACNGT	3 cut(s)	744, 960, 1672
BstACI	GRCGYC	2 cut(s)	91, 1075
BstAPI	GCANNNNNTGC	1 cut(s)	1058
BstBI	TTCGAA	1 cut(s)	1160
BstC8I	GCNNGC	5 cut(s)	438, 711, 834, 1266, 1270
BstDEI	CTNAG	6 cut(s)	402, 900, 1046, 1125, 1566, 1580
BstDSI	CCRYGG	2 cut(s)	428, 956
BstF5I	GGATG	2 cut(s)	236, 559
BstH2I	RGCGCY	2 cut(s)	94, 1579
BstHHI	GCGC	4 cut(s)	93, 134, 1052, 1578
BstKTI	GATC	9 cut(s)	127, 268, 416, 906, 982, 1354, 1462, 1533, 1600
BstMAI	GTCTC	2 cut(s)	99, 158
BstMBI	GATC	9 cut(s)	124, 265, 413, 903, 979, 1351, 1459, 1530, 1597
BstMCI	CGRYCG	1 cut(s)	127
BstMWI	GCNNNNNNNGC	4 cut(s)	129, 1058, 1340, 1454
BstNI	CCWGG	2 cut(s)	88, 270
BstNSI	RCATGY	2 cut(s)	294, 385
BstSCI	CCNGG	3 cut(s)	86, 268, 1300
BstSFI	CTRYAG	1 cut(s)	989
BstSLI	GKGCMC	1 cut(s)	337
BstV1I	GCAGC	1 cut(s)	23
BstV2I	GAAGAC	1 cut(s)	15
BstX2I	RGATCY	5 cut(s)	265, 413, 903, 1459, 1597
BstXI	CCANNNNNNTGG	1 cut(s)	963
BstYI	RGATCY	5 cut(s)	265, 413, 903, 1459, 1597
Bsu15I	ATCGAT	1 cut(s)	127
BsuRI	GGCC	6 cut(s)	86, 832, 919, 967, 1106, 1198
BsuTUI	ATCGAT	1 cut(s)	127
BtgI	CCRYGG	2 cut(s)	428, 956
BtsCI	GGATG	2 cut(s)	236, 559
Cac8I	GCNNGC	5 cut(s)	438, 711, 834, 1266, 1270
CfoI	GCGC	4 cut(s)	93, 134, 1052, 1578
Cfr10I	RCCGGY	1 cut(s)	539
Cfr13I	GGNCC	2 cut(s)	419, 1197
ClaI	ATCGAT	1 cut(s)	127
Csp6I	GTAC	7 cut(s)	425, 758, 864, 961, 1467, 1712, 1813
CviQI	GTAC	7 cut(s)	425, 758, 864, 961, 1467, 1712, 1813
DdeI	CTNAG	6 cut(s)	402, 900, 1046, 1125, 1566, 1580
DinI	GGCGCC	1 cut(s)	92
DpnI	GATC	9 cut(s)	126, 267, 415, 905, 981, 1353, 1461, 1532, 1599
DpnII	GATC	9 cut(s)	124, 265, 413, 903, 979, 1351, 1459, 1530, 1597
DraI	TTTAAA	1 cut(s)	693
DriI	GACNNNNNGTC	1 cut(s)	1287
Eam1105I	GACNNNNNGTC	1 cut(s)	1287
Ecl136II	GAGCTC	1 cut(s)	118
Eco130I	CCWWGG	2 cut(s)	428, 564
Eco147I	AGGCCT	3 cut(s)	86, 919, 1106
Eco24I	GRGCYC	2 cut(s)	120, 1302
Eco47I	GGWCC	1 cut(s)	419
Eco53kI	GAGCTC	1 cut(s)	118
Eco57I	CTGAAG	3 cut(s)	395, 1152, 1631
Eco88I	CYCGRG	2 cut(s)	76, 921
EcoICRI	GAGCTC	1 cut(s)	118
EcoRI	GAATTC	1 cut(s)	652
EcoRII	CCWGG	2 cut(s)	86, 268
EcoT14I	CCWWGG	2 cut(s)	428, 564
EcoT22I	ATGCAT	1 cut(s)	671
EcoT38I	GRGCYC	2 cut(s)	120, 1302
EgeI	GGCGCC	1 cut(s)	92
EheI	GGCGCC	1 cut(s)	92
ErhI	CCWWGG	2 cut(s)	428, 564
FalI	AAGNNNNNCTT	4 cut(s)	600, 632, 1626, 1658
FauI	CCCGC	1 cut(s)	210
FauNDI	CATATG	1 cut(s)	496
FbaI	TGATCA	2 cut(s)	979, 1351
Fnu4HI	GCNGC	3 cut(s)	37, 55, 830
FokI	GGATG	2 cut(s)	243, 546
FriOI	GRGCYC	2 cut(s)	120, 1302
Fsp4HI	GCNGC	3 cut(s)	37, 55, 830
FspBI	CTAG	2 cut(s)	969, 1464
GlaI	GCGC	4 cut(s)	92, 133, 1051, 1577
GluI	GCNGC	3 cut(s)	37, 55, 830
GsaI	CCCAGC	1 cut(s)	1065
GsuI	CTGGAG	2 cut(s)	291, 1023
HaeII	RGCGCY	2 cut(s)	94, 1579
HaeIII	GGCC	6 cut(s)	86, 832, 919, 967, 1106, 1198
HapII	CCGG	4 cut(s)	68, 102, 540, 1302
HhaI	GCGC	4 cut(s)	93, 134, 1052, 1578
Hin1I	GRCGYC	2 cut(s)	91, 1075
Hin6I	GCGC	4 cut(s)	91, 132, 1050, 1576
HinP1I	GCGC	4 cut(s)	91, 132, 1050, 1576
HindIII	AAGCTT	1 cut(s)	180
HinfI	GANTC	4 cut(s)	203, 400, 1007, 1157
HpaII	CCGG	4 cut(s)	68, 102, 540, 1302
HphI	GGTGA	6 cut(s)	348, 554, 905, 1442, 1493, 1690
Hpy166II	GTNNAC	1 cut(s)	613
Hpy188I	TCNGA	8 cut(s)	49, 367, 475, 595, 903, 1351, 1602, 1915
Hpy188III	TCNNGA	8 cut(s)	657, 983, 1002, 1355, 1503, 1536, 1736, 1865
Hpy8I	GTNNAC	1 cut(s)	613
Hpy99I	CGWCG	4 cut(s)	13, 16, 19, 22
HpyAV	CCTTC	9 cut(s)	76, 143, 370, 715, 848, 1127, 1323, 1679, 1733
HpyCH4III	ACNGT	3 cut(s)	744, 960, 1672
HpyCH4IV	ACGT	2 cut(s)	1075, 1811
HpyF10VI	GCNNNNNNNGC	4 cut(s)	129, 1058, 1340, 1454
HpyF3I	CTNAG	6 cut(s)	402, 900, 1046, 1125, 1566, 1580
HpySE526I	ACGT	2 cut(s)	1075, 1811
Hsp92I	GRCGYC	2 cut(s)	91, 1075
HspAI	GCGC	4 cut(s)	91, 132, 1050, 1576
KasI	GGCGCC	1 cut(s)	90
Ksp22I	TGATCA	2 cut(s)	979, 1351
Kzo9I	GATC	9 cut(s)	124, 265, 413, 903, 979, 1351, 1459, 1530, 1597
LmnI	GCTCC	3 cut(s)	70, 673, 1517
Lsp1109I	GCAGC	1 cut(s)	23
LweI	GCATC	3 cut(s)	119, 919, 1048
MaeI	CTAG	2 cut(s)	969, 1464
MaeII	ACGT	2 cut(s)	1075, 1811
MaeIII	GTNAC	6 cut(s)	286, 811, 948, 1234, 1279, 1493
MalI	GATC	9 cut(s)	126, 267, 415, 905, 981, 1353, 1461, 1532, 1599
MboI	GATC	9 cut(s)	124, 265, 413, 903, 979, 1351, 1459, 1530, 1597
MfeI	CAATTG	2 cut(s)	621, 1259
MflI	RGATCY	5 cut(s)	265, 413, 903, 1459, 1597
MhlI	GDGCHC	4 cut(s)	75, 120, 337, 1302
Mly113I	GGCGCC	1 cut(s)	91
MlyI	GAGTC	2 cut(s)	212, 394
MmeI	TCCRAC	1 cut(s)	243
Mph1103I	ATGCAT	1 cut(s)	671
MroXI	GAANNNNTTC	1 cut(s)	1333
MseI	TTAA	5 cut(s)	522, 534, 602, 692, 1146
MslI	CAYNNNNRTG	2 cut(s)	1401, 1753
MspI	CCGG	4 cut(s)	68, 102, 540, 1302
MspR9I	CCNGG	3 cut(s)	88, 270, 1302
MunI	CAATTG	2 cut(s)	621, 1259
MvaI	CCWGG	2 cut(s)	88, 270
MwoI	GCNNNNNNNGC	4 cut(s)	129, 1058, 1340, 1454
NarI	GGCGCC	1 cut(s)	91
NciI	CCSGG	1 cut(s)	1302
NcoI	CCATGG	1 cut(s)	428
NdeI	CATATG	1 cut(s)	496
NdeII	GATC	9 cut(s)	124, 265, 413, 903, 979, 1351, 1459, 1530, 1597
NlaIV	GGNNCC	4 cut(s)	92, 267, 336, 729
NmeAIII	GCCGAG	2 cut(s)	139, 607
NmuCI	GTSAC	1 cut(s)	1279
NsiI	ATGCAT	1 cut(s)	671
NspI	RCATGY	2 cut(s)	294, 385
NspV	TTCGAA	1 cut(s)	1160
PaeR7I	CTCGAG	1 cut(s)	921
PceI	AGGCCT	3 cut(s)	86, 919, 1106
PciI	ACATGT	2 cut(s)	290, 381
PcsI	WCGNNNNNNNCGW	2 cut(s)	11, 17
PdmI	GAANNNNTTC	1 cut(s)	1333
PfeI	GAWTC	2 cut(s)	1007, 1157
PflMI	CCANNNNNTGG	1 cut(s)	565
PfoI	TCCNGGA	1 cut(s)	268
PkrI	GCNGC	3 cut(s)	38, 56, 831
Ple19I	CGATCG	1 cut(s)	127
PleI	GAGTC	2 cut(s)	211, 394
PluTI	GGCGCC	1 cut(s)	94
PpsI	GAGTC	2 cut(s)	211, 394
PscI	ACATGT	2 cut(s)	290, 381
PshBI	ATTAAT	2 cut(s)	522, 602
Psp124BI	GAGCTC	1 cut(s)	120
Psp6I	CCWGG	2 cut(s)	86, 268
PspFI	CCCAGC	1 cut(s)	1061
PspGI	CCWGG	2 cut(s)	86, 268
PspN4I	GGNNCC	4 cut(s)	92, 267, 336, 729
PspPI	GGNCC	2 cut(s)	419, 1197
PspXI	VCTCGAGB	1 cut(s)	921
PsuI	RGATCY	5 cut(s)	265, 413, 903, 1459, 1597
PvuI	CGATCG	1 cut(s)	127
RsaI	GTAC	7 cut(s)	426, 759, 865, 962, 1468, 1713, 1814
RsaNI	GTAC	7 cut(s)	425, 758, 864, 961, 1467, 1712, 1813
RseI	CAYNNNNRTG	2 cut(s)	1401, 1753
SacI	GAGCTC	1 cut(s)	120
SaqAI	TTAA	5 cut(s)	522, 534, 602, 692, 1146
SatI	GCNGC	3 cut(s)	37, 55, 830
Sau3AI	GATC	9 cut(s)	124, 265, 413, 903, 979, 1351, 1459, 1530, 1597
Sau96I	GGNCC	2 cut(s)	419, 1197
SchI	GAGTC	2 cut(s)	212, 394
ScrFI	CCNGG	3 cut(s)	88, 270, 1302
SduI	GDGCHC	4 cut(s)	75, 120, 337, 1302
SfaNI	GCATC	3 cut(s)	119, 919, 1048
SfcI	CTRYAG	1 cut(s)	989
SfoI	GGCGCC	1 cut(s)	92
Sfr274I	CTCGAG	1 cut(s)	921
SfuI	TTCGAA	1 cut(s)	1160
SinI	GGWCC	1 cut(s)	419
SlaI	CTCGAG	1 cut(s)	921
SmiMI	CAYNNNNRTG	2 cut(s)	1401, 1753
SmlI	CTYRAG	3 cut(s)	246, 921, 1632
SmoI	CTYRAG	3 cut(s)	246, 921, 1632
SseBI	AGGCCT	3 cut(s)	86, 919, 1106
SsiI	CCGC	7 cut(s)	54, 97, 217, 829, 907, 1142, 1889
SspDI	GGCGCC	1 cut(s)	90
SspMI	CTAG	2 cut(s)	969, 1464
SstI	GAGCTC	1 cut(s)	120
StuI	AGGCCT	3 cut(s)	86, 919, 1106
StyD4I	CCNGG	3 cut(s)	86, 268, 1300
StyI	CCWWGG	2 cut(s)	428, 564
TaaI	ACNGT	3 cut(s)	744, 960, 1672
TaiI	ACGT	2 cut(s)	1078, 1814
TaqI	TCGA	5 cut(s)	127, 922, 1160, 1291, 1537
TatI	WGTACW	1 cut(s)	1466
TauI	GCSGC	2 cut(s)	57, 832
TfiI	GAWTC	2 cut(s)	1007, 1157
Tru1I	TTAA	5 cut(s)	522, 534, 602, 692, 1146
Tru9I	TTAA	5 cut(s)	522, 534, 602, 692, 1146
TseFI	GTSAC	1 cut(s)	1279
TseI	GCWGC	1 cut(s)	36
Tsp45I	GTSAC	1 cut(s)	1279
TspDTI	ATGAA	8 cut(s)	159, 161, 212, 341, 459, 620, 675, 1754
TspGWI	ACGGA	1 cut(s)	936
Van91I	CCANNNNNTGG	1 cut(s)	565
VpaK11BI	GGWCC	1 cut(s)	419
VspI	ATTAAT	2 cut(s)	522, 602
XapI	RAATTY	3 cut(s)	652, 823, 1012
XceI	RCATGY	2 cut(s)	294, 385
XhoI	CTCGAG	1 cut(s)	921
XmnI	GAANNNNTTC	1 cut(s)	1333
XspI	CTAG	2 cut(s)	969, 1464
ZraI	GACGTC	1 cut(s)	1076
Zsp2I	ATGCAT	1 cut(s)	671

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.