ribosomal RNA-processing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G11240 |
| fragaria_vesca | FvH4_1g04320 FvH4_1g04320 FvH4_3g04070 |
| malus_domestica | MD05G1325000.v1.1 MD10G1302800.v1.1 |
| prunus_persica | Prupe.4G036300_v2.0.a1 |
| pyrus_communis | pycom05g29910 pycom10g25540 |
| rosa_chinensis | RchiOBHm_Chr5g0006551 |
| rosa_laevigata | RLG00000031398 |
| rosa_multiflora | Rmu_sc0008991.1_g000017 |
| rosa_roxburghii | Rroxscaffold_1G00069510 |
| rosa_rugosa | Rorug04G0422100 Rorug04G0435300 |
| rosa_samantha | Rh5AG049600 Rh5BG048900 Rh5CG057200 Rh5DG048200 |
| rosa_wichuraiana | Rw5G004970 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 194 |
| AciI | CCGC | 4 cut(s) | 5, 8, 172, 175 |
| AcsI | RAATTY | 1 cut(s) | 207 |
| AgsI | TTSAA | 1 cut(s) | 79 |
| AluBI | AGCT | 2 cut(s) | 146, 190 |
| AluI | AGCT | 2 cut(s) | 146, 190 |
| Alw26I | GTCTC | 1 cut(s) | 188 |
| Ama87I | CYCGRG | 1 cut(s) | 185 |
| ApeKI | GCWGC | 3 cut(s) | 26, 169, 190 |
| ApoI | RAATTY | 1 cut(s) | 207 |
| AspLEI | GCGC | 2 cut(s) | 169, 195 |
| AspS9I | GGNCC | 1 cut(s) | 225 |
| AvaI | CYCGRG | 1 cut(s) | 185 |
| AvaII | GGWCC | 1 cut(s) | 225 |
| AxyI | CCTNAGG | 1 cut(s) | 119 |
| BbvI | GCAGC | 3 cut(s) | 38, 156, 177 |
| BceAI | ACGGC | 2 cut(s) | 39, 80 |
| BcoDI | GTCTC | 1 cut(s) | 188 |
| BfoI | RGCGCY | 1 cut(s) | 170 |
| BisI | GCNGC | 5 cut(s) | 6, 27, 170, 173, 191 |
| BlpI | GCTNAGC | 1 cut(s) | 147 |
| BlsI | GCNGC | 5 cut(s) | 7, 28, 171, 174, 192 |
| Bme18I | GGWCC | 1 cut(s) | 225 |
| BmeT110I | CYCGRG | 1 cut(s) | 185 |
| BmgT120I | GGNCC | 1 cut(s) | 225 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 147 |
| Bse21I | CCTNAGG | 1 cut(s) | 119 |
| BseMII | CTCAG | 2 cut(s) | 133, 138 |
| BseRI | GAGGAG | 1 cut(s) | 148 |
| BseXI | GCAGC | 3 cut(s) | 38, 156, 177 |
| BsiHKCI | CYCGRG | 1 cut(s) | 185 |
| BsmAI | GTCTC | 1 cut(s) | 188 |
| BsmBI | CGTCTC | 1 cut(s) | 188 |
| BsoBI | CYCGRG | 1 cut(s) | 185 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 147 |
| BspACI | CCGC | 4 cut(s) | 5, 8, 172, 175 |
| BspCNI | CTCAG | 2 cut(s) | 132, 139 |
| Bst4CI | ACNGT | 1 cut(s) | 229 |
| Bst6I | CTCTTC | 3 cut(s) | 15, 62, 125 |
| BstDEI | CTNAG | 2 cut(s) | 119, 147 |
| BstH2I | RGCGCY | 1 cut(s) | 170 |
| BstHHI | GCGC | 2 cut(s) | 169, 195 |
| BstMAI | GTCTC | 1 cut(s) | 188 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 178, 187 |
| BstV1I | GCAGC | 3 cut(s) | 38, 156, 177 |
| Bsu36I | CCTNAGG | 1 cut(s) | 119 |
| CfoI | GCGC | 2 cut(s) | 169, 195 |
| Cfr13I | GGNCC | 1 cut(s) | 225 |
| CseI | GACGC | 1 cut(s) | 170 |
| CviJI | RGCY | 6 cut(s) | 54, 74, 89, 146, 190, 216 |
| CviKI_1 | RGCY | 6 cut(s) | 54, 74, 89, 146, 190, 216 |
| DdeI | CTNAG | 2 cut(s) | 119, 147 |
| Eam1104I | CTCTTC | 3 cut(s) | 15, 62, 125 |
| EarI | CTCTTC | 3 cut(s) | 15, 62, 125 |
| EciI | GGCGGA | 1 cut(s) | 190 |
| Eco47I | GGWCC | 1 cut(s) | 225 |
| Eco81I | CCTNAGG | 1 cut(s) | 119 |
| Eco88I | CYCGRG | 1 cut(s) | 185 |
| Esp3I | CGTCTC | 1 cut(s) | 188 |
| FaiI | YATR | 2 cut(s) | 60, 62 |
| Fnu4HI | GCNGC | 5 cut(s) | 6, 27, 170, 173, 191 |
| Fsp4HI | GCNGC | 5 cut(s) | 6, 27, 170, 173, 191 |
| FspI | TGCGCA | 1 cut(s) | 194 |
| GlaI | GCGC | 2 cut(s) | 168, 194 |
| GluI | GCNGC | 5 cut(s) | 6, 27, 170, 173, 191 |
| HaeII | RGCGCY | 1 cut(s) | 170 |
| HgaI | GACGC | 1 cut(s) | 170 |
| HhaI | GCGC | 2 cut(s) | 169, 195 |
| Hin6I | GCGC | 2 cut(s) | 167, 193 |
| HinP1I | GCGC | 2 cut(s) | 167, 193 |
| HinfI | GANTC | 1 cut(s) | 31 |
| Hpy188III | TCNNGA | 2 cut(s) | 121, 185 |
| HpyCH4III | ACNGT | 1 cut(s) | 229 |
| HpyCH4IV | ACGT | 1 cut(s) | 101 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 178, 187 |
| HpyF3I | CTNAG | 2 cut(s) | 119, 147 |
| HpySE526I | ACGT | 1 cut(s) | 101 |
| HspAI | GCGC | 2 cut(s) | 167, 193 |
| LpnPI | CCDG | 2 cut(s) | 106, 185 |
| Lsp1109I | GCAGC | 3 cut(s) | 38, 156, 177 |
| MaeII | ACGT | 1 cut(s) | 101 |
| MaeIII | GTNAC | 1 cut(s) | 97 |
| MboII | GAAGA | 5 cut(s) | 32, 79, 136, 139, 142 |
| MluCI | AATT | 1 cut(s) | 207 |
| MmeI | TCCRAC | 1 cut(s) | 184 |
| MnlI | CCTC | 5 cut(s) | 16, 63, 126, 128, 157 |
| MseI | TTAA | 1 cut(s) | 105 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 178, 187 |
| NmuCI | GTSAC | 1 cut(s) | 97 |
| NsbI | TGCGCA | 1 cut(s) | 194 |
| PaeR7I | CTCGAG | 1 cut(s) | 185 |
| PfeI | GAWTC | 1 cut(s) | 31 |
| PkrI | GCNGC | 5 cut(s) | 7, 28, 171, 174, 192 |
| PspPI | GGNCC | 1 cut(s) | 225 |
| SaqAI | TTAA | 1 cut(s) | 105 |
| SatI | GCNGC | 5 cut(s) | 6, 27, 170, 173, 191 |
| Sau96I | GGNCC | 1 cut(s) | 225 |
| SetI | ASST | 6 cut(s) | 18, 104, 120, 148, 192, 204 |
| Sfr274I | CTCGAG | 1 cut(s) | 185 |
| SinI | GGWCC | 1 cut(s) | 225 |
| SlaI | CTCGAG | 1 cut(s) | 185 |
| SmlI | CTYRAG | 1 cut(s) | 185 |
| SmoI | CTYRAG | 1 cut(s) | 185 |
| Sse9I | AATT | 1 cut(s) | 207 |
| SsiI | CCGC | 4 cut(s) | 5, 8, 172, 175 |
| TaaI | ACNGT | 1 cut(s) | 229 |
| TaiI | ACGT | 1 cut(s) | 104 |
| TaqI | TCGA | 2 cut(s) | 18, 186 |
| TasI | AATT | 1 cut(s) | 207 |
| TauI | GCSGC | 2 cut(s) | 8, 175 |
| TfiI | GAWTC | 1 cut(s) | 31 |
| Tru1I | TTAA | 1 cut(s) | 105 |
| Tru9I | TTAA | 1 cut(s) | 105 |
| TseFI | GTSAC | 1 cut(s) | 97 |
| TseI | GCWGC | 3 cut(s) | 26, 169, 190 |
| Tsp45I | GTSAC | 1 cut(s) | 97 |
| TspGWI | ACGGA | 2 cut(s) | 24, 28 |
| VpaK11BI | GGWCC | 1 cut(s) | 225 |
| XapI | RAATTY | 1 cut(s) | 207 |
| XhoI | CTCGAG | 1 cut(s) | 185 |