Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0008543

Physical Location & Seq

Genomic Coordinates Reverse (-)

182570 .. 185632

Gene Structure 3063 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g00160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGATGGAAAACGCCGGCGGCCAAGTTGCTGCTCCAATTTACATTCACCAGACGCTTTCGGGCCGGTTTTGTGATTCGCCGGTCATGGGGAGGAAGCGCGATCTCCCTTACCAGGGCCCCAATTATCAACACCCCTACTCGCAGCAGCCGCGCTTCACAAACCCCGGCAACGACTGGAATCCTCACGTTTGGGACTGGGACACTGTCAGATTTGTTGCCAAGCCGCTGGACTCCAGGATGATGCATCTGGGCACTACTTCCACAACAGAGCAGAGGAACAAAGAGGAAGTTTCTGGGCCTGTGAAGGACACGGCAGAAGATGAAGATGACGAGAGCCTTCAGCTGAATCTCGCCGGTGGTTTCACCTCTGTGGAGGAGCCTGTGCCCAGGCCCAATAAAAGGGTCCGGTCTGGATCTCCAGGGAATGGGAATGGCAACTACCCTATGTGCCAAGTTGATAACTGTAAGGAAGATCTGTCAAATGCCAAGGACTACCATCGCCGACATAAAGTCTGCGAGGTTCACAGTAAATCCACCAGAGCCCTTGTTGCCAAGCAGATGCAGAGATTCTGCCAGCAGTGCAGCAGGTTTCACCCCCTTTCAGAGTTTGATGAGGGGAAGAGGAGTTGTAGACGGAGACTTGCGGGGCATAACCGGAGAAGAAGGAAAACCCAACCAGAGGATGTTACTTCACGGCTCACTCTCCCAGGAGATGGGGATAACAAAATCATTGGAAATAGCGATATCGTCAACTTGCTAGCTGCTATAGCTCGTCCTCAAGGGAAAAATGATGTCAGAAATATCAATGGCTCATCAGTGTTGGACAGAGAGCAGCTCCTTCGGGTTCTTAGTAAGATAAATTCATTACCTTTGTCAGCAGACCTTGCTGCCAAGTTGCCTAATCTTGGAAGTTTGACTAGGAAAGCTTCTGAACTGCTTTCTTTCGATCTTCAAAACAAATTGAATGGAAGGGCATCTGTATCAACCATGGACTTGCTTACTGTACTATCAGCTACTCTAGCAACATCTGCTCCTGAAGCTCACGCAATGTTATCTCAAAAGTGCAGCCAGAGCAGTGACAGTGAGAAAACTAAGTTGACCTGCTCTGACCAGGCAGCTGAACCCAATTTGCACAAGATACCTCCACAAGAGATTCATTCAGCCGGGGGAGAGAGAAGTAGCACTAGTTACCAGTCTCCCATGGAAGATTCAGACTGCCAAGTTCAAGAAGCTGGAGTTAATTTACCCTTACAGCTATTTAGCTCCTCACCTGAGAATGACAGCCCGCCAAAACTGGCTTCTTCTAGAAAGTATTTCTCGTCTGACAGTAGTAATCCCACTGAGGATAGGTCTCCTTCATCCTCCCCTCCTGTTGTGCAAACACTGTTTCCACTGAAGAGTTTGGCAGAAATTGTTAAGTCTGACAAGTTGCCGGTAAGCAAAGAGGGCAGTGGAAACCCTGACACTAGCTGGACTTGTGGCAGTAACATGCCTTTTGATCTTTTTAGAGGGTCAAATAGGGGAGCTGAAGCGAGCTCCATTCAAAACTTTCCTAACCAACCTGGCTATACTTCTTCTGGTTCAGACCATTCACCTTCTAGTTTGAATTCTGATGTGCAGGATCGCACCGGAAGGATATTATTTAAGCTTTTTGATAAAGATCCAAGTCATTTACCAGGGACATTGCGGACACAGATATTCAATTGGCTTTCCAGCAGTCCATCTGAAATGGAGAGCTACATAAGGCCTGGTTGTGTTGTTCTATCAGTTTATGTATCAATGCCATCTGCTTCGTGGGAGCAACTTGAAGAAAACCTGGTTCAGCGTGTCAGTTCTTTGGTTCAGAGTTCAGATTCTGATTTTTGGAGAAGTGGGAGGTTTTTAGTTAATACAGGCAGGCAATTAGCATCACACAAAGATGGAAAAATTCGTACATGCAAAGCTTGGAGATCGTGTAGTTCTCCAGAGCAACCGATCGATCTCTGTGTCCCCTTTGGCTGTCGTGGGTGGGCAAGAAACCTCTCTTCTGTTAAGGGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

680

Amino Acids

74.92

Weight (kDa)

8.37

Isoelectric Point (pI)

60.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	150 - 223	3e-30	SBP domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0008543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20980 AT1G76580 AT1G76580 AT1G76580
fragaria_vesca	FvH4_5g26510 FvH4_5g26510 FvH4_5g26510 FvH4_5g26510
malus_domestica	MD00G1031600.v1.1 MD06G1001500.v1.1
prunus_persica	Prupe.5G002300_v2.0.a1
pyrus_communis	pycom06g00160 pycom16g26290
rosa_chinensis	RchiOBHm_Chr7g0217411
rosa_laevigata	RLG00000002479
rosa_multiflora	Rmu_sc0000145.1_g000013
rosa_roxburghii	Rroxscaffold_3G00242100
rosa_rugosa	Rorug07G0169000
rosa_samantha	Rh7AG308600 Rh7BG299300 Rh7CG328000 Rh7DG307900
rosa_wichuraiana	Rw7G026170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	576, 1109
AccB7I	CCANNNNNTGG	2 cut(s)	425, 713
AccI	GTMKAC	1 cut(s)	631
AccII	CGCG	2 cut(s)	99, 151
AciI	CCGC	6 cut(s)	18, 149, 224, 644, 1286, 1687
AclWI	GGATC	3 cut(s)	421, 1629, 1655
AcoI	YGGCCR	1 cut(s)	19
AcsI	RAATTY	3 cut(s)	859, 1606, 1926
AcuI	CTGAAG	4 cut(s)	323, 1056, 1415, 1548
AfaI	GTAC	2 cut(s)	1005, 1933
AfiI	CCNNNNNNNGG	8 cut(s)	86, 112, 113, 399, 425, 679, 713, 905
AgsI	TTSAA	7 cut(s)	953, 964, 1226, 1544, 1606, 1702, 1808
AhdI	GACNNNNNGTC	1 cut(s)	509
AhlI	ACTAGT	1 cut(s)	1184
AjuI	GAANNNNNNNTTGG	2 cut(s)	1282, 1314
AleI	CACNNNNGTG	1 cut(s)	368
Alw21I	GWGCWC	1 cut(s)	1538
Alw26I	GTCTC	3 cut(s)	631, 1200, 1356
AlwI	GGATC	3 cut(s)	421, 1629, 1655
AlwNI	CAGNNNCTG	1 cut(s)	1856
AoxI	GGCC	6 cut(s)	19, 61, 115, 296, 389, 1745
ApaI	GGGCCC	1 cut(s)	119
ApeKI	GCWGC	9 cut(s)	29, 142, 145, 582, 761, 832, 887, 1065, 1115
ApoI	RAATTY	3 cut(s)	859, 1606, 1926
AspLEI	GCGC	2 cut(s)	99, 153
AspS9I	GGNCC	6 cut(s)	61, 115, 116, 296, 390, 403
AsuC2I	CCSGG	2 cut(s)	165, 1165
AsuHPI	GGTGA	5 cut(s)	38, 355, 584, 1260, 1584
AsuNHI	GCTAGC	1 cut(s)	757
AvaII	GGWCC	1 cut(s)	403
BaeGI	GKGCMC	3 cut(s)	119, 254, 387
BanII	GRGCYC	3 cut(s)	119, 544, 1538
Bbv12I	GWGCWC	1 cut(s)	1538
BbvI	GCAGC	9 cut(s)	16, 154, 157, 594, 748, 844, 874, 1077, 1127
BccI	CCATC	5 cut(s)	504, 707, 1729, 1792, 1913
BceAI	ACGGC	2 cut(s)	327, 710
BcgI	CGANNNNNNTGC	2 cut(s)	821, 855
BcnI	CCSGG	2 cut(s)	165, 1165
BcoDI	GTCTC	3 cut(s)	631, 1200, 1356
BcuI	ACTAGT	1 cut(s)	1184
BfaI	CTAG	7 cut(s)	758, 918, 1019, 1185, 1305, 1467, 1599
BfmI	CTRYAG	1 cut(s)	765
BfuAI	ACCTGC	2 cut(s)	576, 1109
BglII	AGATCT	1 cut(s)	472
Bme18I	GGWCC	1 cut(s)	403
BmeRI	GACNNNNNGTC	1 cut(s)	509
BmgT120I	GGNCC	6 cut(s)	61, 115, 116, 296, 390, 403
BmiI	GGNNCC	4 cut(s)	117, 118, 378, 404
BmrI	ACTGGG	1 cut(s)	205
BmsI	GCATC	5 cut(s)	231, 253, 549, 983, 1916
BmtI	GCTAGC	1 cut(s)	761
BmuI	ACTGGG	1 cut(s)	205
BplI	GAGNNNNNCTC	2 cut(s)	819, 851
BpmI	CTGGAG	4 cut(s)	217, 402, 1254, 1947
BpuEI	CTTGAG	1 cut(s)	762
BpuMI	CCSGG	2 cut(s)	165, 1165
Bsa29I	ATCGAT	1 cut(s)	1977
BsaBI	GATNNNNATC	1 cut(s)	1659
BsaI	GGTCTC	1 cut(s)	1356
BsaWI	WCCGGW	3 cut(s)	405, 654, 1628
BsaXI	ACNNNNNCTCC	4 cut(s)	1015, 1045, 1939, 1969
Bsc4I	CCNNNNNNNGG	8 cut(s)	86, 112, 113, 399, 425, 679, 713, 905
Bse118I	RCCGGY	5 cut(s)	14, 63, 79, 353, 1432
Bse1I	ACTGG	4 cut(s)	179, 200, 1192, 1299
Bse3DI	GCAATG	2 cut(s)	1053, 1682
Bse8I	GATNNNNATC	1 cut(s)	1659
BseCI	ATCGAT	1 cut(s)	1977
BseGI	GGATG	3 cut(s)	243, 688, 1358
BseJI	GATNNNNATC	1 cut(s)	1659
BseLI	CCNNNNNNNGG	8 cut(s)	86, 112, 113, 399, 425, 679, 713, 905
BseMI	GCAATG	2 cut(s)	1053, 1682
BseMII	CTCAG	2 cut(s)	1263, 1332
BseNI	ACTGG	4 cut(s)	179, 200, 1192, 1299
BseRI	GAGGAG	3 cut(s)	389, 637, 1255
BseSI	GKGCMC	3 cut(s)	119, 254, 387
BseXI	GCAGC	9 cut(s)	16, 154, 157, 594, 748, 844, 874, 1077, 1127
BsgI	GTGCAG	3 cut(s)	601, 1084, 1637
Bsh1236I	CGCG	2 cut(s)	99, 151
Bsh1285I	CGRYCG	1 cut(s)	1977
BshFI	GGCC	6 cut(s)	21, 63, 117, 298, 391, 1747
BshVI	ATCGAT	1 cut(s)	1977
BsiEI	CGRYCG	1 cut(s)	1977
BsiHKAI	GWGCWC	1 cut(s)	1538
BslFI	GGGAC	4 cut(s)	206, 212, 1693, 1973
BslI	CCNNNNNNNGG	8 cut(s)	86, 112, 113, 399, 425, 679, 713, 905
BsmAI	GTCTC	3 cut(s)	631, 1200, 1356
BsmFI	GGGAC	4 cut(s)	206, 212, 1693, 1973
BsnI	GGCC	6 cut(s)	21, 63, 117, 298, 391, 1747
Bso31I	GGTCTC	1 cut(s)	1356
Bsp120I	GGGCCC	1 cut(s)	115
Bsp1286I	GDGCHC	5 cut(s)	119, 254, 387, 544, 1538
Bsp19I	CCATGG	2 cut(s)	987, 1200
BspACI	CCGC	6 cut(s)	18, 149, 224, 644, 1286, 1687
BspANI	GGCC	6 cut(s)	21, 63, 117, 298, 391, 1747
BspCNI	CTCAG	2 cut(s)	1264, 1333
BspDI	ATCGAT	1 cut(s)	1977
BspFNI	CGCG	2 cut(s)	99, 151
BspLI	GGNNCC	4 cut(s)	117, 118, 378, 404
BspMI	ACCTGC	2 cut(s)	576, 1109
BspOI	GCTAGC	1 cut(s)	761
BspPI	GGATC	3 cut(s)	421, 1629, 1655
BspTNI	GGTCTC	1 cut(s)	1356
BsrDI	GCAATG	2 cut(s)	1053, 1682
BsrFI	RCCGGY	5 cut(s)	14, 63, 79, 353, 1432
BsrI	ACTGG	4 cut(s)	179, 200, 1192, 1299
BssAI	RCCGGY	5 cut(s)	14, 63, 79, 353, 1432
BssT1I	CCWWGG	3 cut(s)	486, 987, 1200
Bst4CI	ACNGT	7 cut(s)	205, 464, 527, 1003, 1082, 1328, 1386
Bst6I	CTCTTC	3 cut(s)	614, 1391, 2029
BstAPI	GCANNNNNTGC	2 cut(s)	884, 1028
BstC8I	GCNNGC	6 cut(s)	16, 575, 759, 1286, 1534, 1898
BstDEI	CTNAG	4 cut(s)	848, 1092, 1272, 1341
BstDSI	CCRYGG	2 cut(s)	987, 1200
BstF5I	GGATG	3 cut(s)	243, 688, 1358
BstFNI	CGCG	2 cut(s)	99, 151
BstHHI	GCGC	2 cut(s)	99, 153
BstMAI	GTCTC	3 cut(s)	631, 1200, 1356
BstMCI	CGRYCG	1 cut(s)	1977
BstNSI	RCATGY	2 cut(s)	1492, 1938
BstSFI	CTRYAG	1 cut(s)	765
BstSLI	GKGCMC	3 cut(s)	119, 254, 387
BstUI	CGCG	2 cut(s)	99, 151
BstV1I	GCAGC	9 cut(s)	16, 154, 157, 594, 748, 844, 874, 1077, 1127
BstX2I	RGATCY	3 cut(s)	413, 472, 1660
BstXI	CCANNNNNNTGG	1 cut(s)	226
BstYI	RGATCY	3 cut(s)	413, 472, 1660
Bsu15I	ATCGAT	1 cut(s)	1977
BsuRI	GGCC	6 cut(s)	21, 63, 117, 298, 391, 1747
BsuTUI	ATCGAT	1 cut(s)	1977
BtgI	CCRYGG	2 cut(s)	987, 1200
BtgZI	GCGATG	1 cut(s)	482
BtsCI	GGATG	3 cut(s)	243, 688, 1358
BtsI	GCAGTG	3 cut(s)	584, 1081, 1456
BtsIMutI	CAGTG	9 cut(s)	201, 584, 822, 1081, 1087, 1338, 1382, 1391, 1456
BveI	ACCTGC	2 cut(s)	576, 1109
Cac8I	GCNNGC	6 cut(s)	16, 575, 759, 1286, 1534, 1898
CaiI	CAGNNNCTG	1 cut(s)	1856
CfoI	GCGC	2 cut(s)	99, 153
Cfr10I	RCCGGY	5 cut(s)	14, 63, 79, 353, 1432
Cfr13I	GGNCC	6 cut(s)	61, 115, 116, 296, 390, 403
ClaI	ATCGAT	1 cut(s)	1977
CseI	GACGC	1 cut(s)	61
CsiI	ACCWGGT	1 cut(s)	1815
Csp6I	GTAC	2 cut(s)	1004, 1932
CviAII	CATG	5 cut(s)	85, 988, 1201, 1489, 1935
CviQI	GTAC	2 cut(s)	1004, 1932
DdeI	CTNAG	4 cut(s)	848, 1092, 1272, 1341
DriI	GACNNNNNGTC	1 cut(s)	509
EaeI	YGGCCR	1 cut(s)	19
Eam1104I	CTCTTC	3 cut(s)	614, 1391, 2029
Eam1105I	GACNNNNNGTC	1 cut(s)	509
EarI	CTCTTC	3 cut(s)	614, 1391, 2029
Ecl136II	GAGCTC	1 cut(s)	1536
Eco130I	CCWWGG	3 cut(s)	486, 987, 1200
Eco147I	AGGCCT	1 cut(s)	1747
Eco24I	GRGCYC	3 cut(s)	119, 544, 1538
Eco31I	GGTCTC	1 cut(s)	1356
Eco32I	GATATC	1 cut(s)	745
Eco47I	GGWCC	1 cut(s)	403
Eco53kI	GAGCTC	1 cut(s)	1536
Eco57I	CTGAAG	4 cut(s)	323, 1056, 1415, 1548
EcoICRI	GAGCTC	1 cut(s)	1536
EcoO109I	RGGNCCY	2 cut(s)	115, 116
EcoRI	GAATTC	1 cut(s)	1606
EcoRV	GATATC	1 cut(s)	745
EcoT14I	CCWWGG	3 cut(s)	486, 987, 1200
EcoT22I	ATGCAT	1 cut(s)	246
EcoT38I	GRGCYC	3 cut(s)	119, 544, 1538
ErhI	CCWWGG	3 cut(s)	486, 987, 1200
FaeI	CATG	5 cut(s)	88, 991, 1204, 1492, 1938
FaqI	GGGAC	4 cut(s)	206, 212, 1693, 1973
FatI	CATG	5 cut(s)	84, 987, 1200, 1488, 1934
FauI	CCCGC	2 cut(s)	637, 1293
FblI	GTMKAC	1 cut(s)	631
FokI	GGATG	3 cut(s)	250, 695, 1345
FriOI	GRGCYC	3 cut(s)	119, 544, 1538
FspBI	CTAG	7 cut(s)	758, 918, 1019, 1185, 1305, 1467, 1599
GlaI	GCGC	2 cut(s)	98, 152
GsuI	CTGGAG	4 cut(s)	217, 402, 1254, 1947
HaeIII	GGCC	6 cut(s)	21, 63, 117, 298, 391, 1747
HgaI	GACGC	1 cut(s)	61
HhaI	GCGC	2 cut(s)	99, 153
Hin1II	CATG	5 cut(s)	88, 991, 1204, 1492, 1938
Hin6I	GCGC	2 cut(s)	97, 151
HinP1I	GCGC	2 cut(s)	97, 151
HincII	GTYRAC	2 cut(s)	751, 1098
HindII	GTYRAC	2 cut(s)	751, 1098
HindIII	AAGCTT	3 cut(s)	924, 1646, 1941
HinfI	GANTC	8 cut(s)	74, 178, 230, 346, 567, 1153, 1208, 1853
HphI	GGTGA	5 cut(s)	38, 355, 584, 1260, 1584
Hpy166II	GTNNAC	4 cut(s)	523, 632, 751, 1098
Hpy188III	TCNNGA	5 cut(s)	411, 1034, 1226, 1305, 1964
Hpy8I	GTNNAC	4 cut(s)	523, 632, 751, 1098
HpyAV	CCTTC	8 cut(s)	298, 347, 657, 848, 963, 1365, 1605, 1626
HpyCH4III	ACNGT	7 cut(s)	205, 464, 527, 1003, 1082, 1328, 1386
HpyCH4IV	ACGT	1 cut(s)	186
HpyCH4V	TGCA	8 cut(s)	244, 562, 582, 1065, 1132, 1378, 1618, 1938
HpyF3I	CTNAG	4 cut(s)	848, 1092, 1272, 1341
HpySE526I	ACGT	1 cut(s)	186
Hsp92II	CATG	5 cut(s)	88, 991, 1204, 1492, 1938
HspAI	GCGC	2 cut(s)	97, 151
KroI	GCCGGC	1 cut(s)	14
KroNI	GCCGGC	1 cut(s)	16
LmnI	GCTCC	8 cut(s)	37, 376, 840, 1036, 1268, 1523, 1541, 1798
Lsp1109I	GCAGC	9 cut(s)	16, 154, 157, 594, 748, 844, 874, 1077, 1127
LweI	GCATC	5 cut(s)	231, 253, 549, 983, 1916
MabI	ACCWGGT	1 cut(s)	1815
MaeI	CTAG	7 cut(s)	758, 918, 1019, 1185, 1305, 1467, 1599
MaeII	ACGT	1 cut(s)	186
MaeIII	GTNAC	4 cut(s)	685, 1076, 1187, 1484
MfeI	CAATTG	1 cut(s)	1702
MflI	RGATCY	3 cut(s)	413, 472, 1660
MhlI	GDGCHC	5 cut(s)	119, 254, 387, 544, 1538
MlyI	GAGTC	1 cut(s)	224
MmeI	TCCRAC	1 cut(s)	801
Mph1103I	ATGCAT	1 cut(s)	246
MreI	CGCCGGCG	1 cut(s)	14
MroNI	GCCGGC	1 cut(s)	14
MseI	TTAA	5 cut(s)	1239, 1416, 1644, 1887, 2031
MslI	CAYNNNNRTG	2 cut(s)	368, 1917
MspA1I	CMGCKG	3 cut(s)	226, 343, 1118
MunI	CAATTG	1 cut(s)	1702
MvnI	CGCG	2 cut(s)	99, 151
NaeI	GCCGGC	1 cut(s)	16
NciI	CCSGG	2 cut(s)	165, 1165
NcoI	CCATGG	2 cut(s)	987, 1200
NgoMIV	GCCGGC	1 cut(s)	14
NheI	GCTAGC	1 cut(s)	757
NlaIII	CATG	5 cut(s)	88, 991, 1204, 1492, 1938
NlaIV	GGNNCC	4 cut(s)	117, 118, 378, 404
NmuCI	GTSAC	1 cut(s)	1076
NsiI	ATGCAT	1 cut(s)	246
NspI	RCATGY	2 cut(s)	1492, 1938
OliI	CACNNNNGTG	1 cut(s)	368
PceI	AGGCCT	1 cut(s)	1747
PdiI	GCCGGC	1 cut(s)	16
PfeI	GAWTC	7 cut(s)	74, 178, 346, 567, 1153, 1208, 1853
PflFI	GACNNNGTC	1 cut(s)	203
PflMI	CCANNNNNTGG	2 cut(s)	425, 713
PfoI	TCCNGGA	1 cut(s)	233
Ple19I	CGATCG	1 cut(s)	1977
PleI	GAGTC	1 cut(s)	224
PpsI	GAGTC	1 cut(s)	224
Psp124BI	GAGCTC	1 cut(s)	1538
PspN4I	GGNNCC	4 cut(s)	117, 118, 378, 404
PspOMI	GGGCCC	1 cut(s)	115
PspPI	GGNCC	6 cut(s)	61, 115, 116, 296, 390, 403
PstNI	CAGNNNCTG	1 cut(s)	1856
PsuI	RGATCY	3 cut(s)	413, 472, 1660
PsyI	GACNNNGTC	1 cut(s)	203
PvuI	CGATCG	1 cut(s)	1977
PvuII	CAGCTG	2 cut(s)	343, 1118
RsaI	GTAC	2 cut(s)	1005, 1933
RsaNI	GTAC	2 cut(s)	1004, 1932
RseI	CAYNNNNRTG	2 cut(s)	368, 1917
SacI	GAGCTC	1 cut(s)	1538
SaqAI	TTAA	5 cut(s)	1239, 1416, 1644, 1887, 2031
Sau96I	GGNCC	6 cut(s)	61, 115, 116, 296, 390, 403
SchI	GAGTC	1 cut(s)	224
SduI	GDGCHC	5 cut(s)	119, 254, 387, 544, 1538
SexAI	ACCWGGT	1 cut(s)	1815
SfaNI	GCATC	5 cut(s)	231, 253, 549, 983, 1916
SfcI	CTRYAG	1 cut(s)	765
SgrAI	CRCCGGYG	2 cut(s)	14, 353
SinI	GGWCC	1 cut(s)	403
SmiMI	CAYNNNNRTG	2 cut(s)	368, 1917
SmlI	CTYRAG	1 cut(s)	777
SmoI	CTYRAG	1 cut(s)	777
SpeI	ACTAGT	1 cut(s)	1184
SseBI	AGGCCT	1 cut(s)	1747
SsiI	CCGC	6 cut(s)	18, 149, 224, 644, 1286, 1687
SspMI	CTAG	7 cut(s)	758, 918, 1019, 1185, 1305, 1467, 1599
SstI	GAGCTC	1 cut(s)	1538
StuI	AGGCCT	1 cut(s)	1747
StyI	CCWWGG	3 cut(s)	486, 987, 1200
TaaI	ACNGT	7 cut(s)	205, 464, 527, 1003, 1082, 1328, 1386
TaiI	ACGT	1 cut(s)	189
TaqI	TCGA	2 cut(s)	945, 1977
TatI	WGTACW	1 cut(s)	1003
TauI	GCSGC	3 cut(s)	21, 151, 226
TfiI	GAWTC	7 cut(s)	74, 178, 346, 567, 1153, 1208, 1853
Tru1I	TTAA	5 cut(s)	1239, 1416, 1644, 1887, 2031
Tru9I	TTAA	5 cut(s)	1239, 1416, 1644, 1887, 2031
TscAI	CASTG	9 cut(s)	208, 584, 822, 1081, 1087, 1345, 1389, 1398, 1456
TseFI	GTSAC	1 cut(s)	1076
TseI	GCWGC	9 cut(s)	29, 142, 145, 582, 761, 832, 887, 1065, 1115
Tsp45I	GTSAC	1 cut(s)	1076
TspDTI	ATGAA	4 cut(s)	336, 852, 1145, 1347
TspGWI	ACGGA	1 cut(s)	649
TspRI	CASTG	9 cut(s)	208, 584, 822, 1081, 1087, 1345, 1389, 1398, 1456
Tth111I	GACNNNGTC	1 cut(s)	203
Van91I	CCANNNNNTGG	2 cut(s)	425, 713
VpaK11BI	GGWCC	1 cut(s)	403
XapI	RAATTY	3 cut(s)	859, 1606, 1926
XbaI	TCTAGA	1 cut(s)	1304
XceI	RCATGY	2 cut(s)	1492, 1938
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1791
XmiI	GTMKAC	1 cut(s)	631
XspI	CTAG	7 cut(s)	758, 918, 1019, 1185, 1305, 1467, 1599
Zsp2I	ATGCAT	1 cut(s)	246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.