Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000145.1

Orthogroup ID

OG0008543

Physical Location & Seq

Genomic Coordinates Forward (+)

82887 .. 88031

Gene Structure 5145 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000145.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3231 bp

atggaagaggttggtgcccaagttgctgccccaattttcctccggcaatcgctttcgagtcggttctgcgacgcgccggcggcggcggcggcggccatgggtaagaagaagcgcgatctcccttaccagaccccaaactatcaacacccaaattcgcagccgaggttcgcaaaccccgggaccaacagctggaacccaagcgtttggggctgggacagtatgaggtttgtagccaagccactggacactgagatgatgggtactaccaattcagagcccaagaggaaggaggaagcggctgctggagttgtgaagagcaccgccgtggtgggggatgatgatgaacgccttcagctgaatctgggtggtgggttggctactgtggaggagccggcggcatccaggccgaataagagggtccggtccggatctccggggaataatggtggaagctaccccatgtgccaagttgatgattgtaaagaggatctgtcaagtgccaaagactatcatcgccgtcataaagtctgtgagagtcacagtaaatccaccaaggccctagttgctaagcagatgcagaggttctgccagcagtgcagcaggtttcacccgctttcagagtttgatgaggggaagagaagttgcagaaggagacttgcggggcataacaggcgaagaaggaaaacccagcctgaggatgttacctcaaggctcactatccctggagatggggataacaaaactagtggaaatttggatattgtcaacttgttagctgctataactcgtccacaggggaaaaatgatgtccgaactaccaacggctcgtcggtactggacagagagcagctccttcagattcttagtaagataaattcattgcctttgccagtagaccttgctgccaagttgccgaatctcggaaatttaaattggaaagcttcagacctactttctttagatcttcaaaacaaattgaatggaaaaacatctgcgtcaaccatggacttgattactgttctttcagctactctagcagcaccttcttctgacacacttgctatgttatctcaaaagagcagtcagagtagtgacagtgagaaaactaagttaacatgctctgaccaggcagctggtcctaatttgcagaagaggcctcctcaagagtttcattcagctgggggagagagaagtagtactagctaccagtctcctacagaagattcagactgccaggttcaagagactcgagtcaaattacctttacagctattcagctcctcacctgaggatgacagtccaccaaaactggcttcttccagaaagtatttctcttcagacagtagtaatcgcacagaggagaggtctccatcatcgtcacctcctgtaatgcaaacactgtttccaatgaagagtatggcagacactgtcaagtcggagaaactttcaataagcaaagatttgaatgtgaacctggactctagcatgaacggtggtagtaacttgccttttgatctttttagagggccaaatagaggagctgtcagctcctccattcaaaattttccacaccaagctggctatacatcttctagttctgatcattcaccatctagcttgaattctgatcctcaggatcgtactggaagaatactgtttaaactatttgataaggatccgagtcagttaccagggacattgcggacacaggtatacagttggctttctaacagtccatctgaaatggagagctacataaggcctggctgtgtggtcctatcagtttatgtgtcaatgtcatttgcggcctgggagcatcttgaagaaaacctggtccaacgtgtcagttctttaatacagagttcagattctgatttttggagaagtggaaggtttttagtaaatacagggaggcaattagcttctcataaagatggaaagattcgtctatccaaagcctggacaacatttagttcaccagagttaatctctgtgtcccctttggctgtcgtggccgggcaaaaaacctctctttcaataaggggtagaaatctgactaatcttggcaccaagattcattgcacgtatatgggtggttacacatcaaaggaagttggaacaacatatcatggaaccgcgtatgatgagataaatttgggaagctttcaaattcatgatgcatctcccggtgttctaggtcgctgtttcatagaggtggaaaatggtttcaagggaaacagctttcctgtgatcatagctgatgctacaatctgtagcgaattgaatctcattgagtctgagtttgatggggagacaaaggtatgcagtgcaatttcagaagatgaaaatcatgattatgggcggcccaggtcaagggaggaagtccttcactttctgaacgagctaggttggctcttccaaaggaaaaggatctcttccatgtttcaagggtctggctactctcttagccgtttcaaatttttactcacattcacagttgagagagactgttgtactttggtgaaaacacttctagacatattggtaaatttcgatgggaatgagctatcaagagagtcattggggatgctgtcagatgtccagctattaaaccgggctgtaaaaaggaggtgcaggaagatgattgacttgcttattaattattcggtgattagcagtgacaagagatacatttttcctccaaatcttgctggacctggtggcctgacacctcttcatttggctgcttctttgtcaaattcggaggatatgattgatgctttgacgaatgacccagaggagatcggattgaactgctggcattcccttttggatggtaatgggcagtctccatatgcttatgctatgatgaggaataattactcttacaacaatctggtggctcgcaaacttactgacagaagaaatagtcaggttaccttaacaattggaaatgagatagagcaaacccatatggctatggagctggagcgtaggacaagtatccaattcagacaaggtagcagatcatgtgccaaatgcgcagttgcagcaacaaaatacaccaggagggttcctggtgctcaaggcttgcttcagcgtccattcattcattctatgcttgccatagctgctgtttgtgtttgtgtgtgcttgttcttgagaggttccccagacattggctcagttgctcctttcaagtgggagaatttggattttggcacaatttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

1076

Amino Acids

118.59

Weight (kDa)

8.57

Isoelectric Point (pI)

55.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20980 AT1G76580 AT1G76580 AT1G76580
fragaria_vesca	FvH4_5g26510 FvH4_5g26510 FvH4_5g26510 FvH4_5g26510
malus_domestica	MD00G1031600.v1.1 MD06G1001500.v1.1
prunus_persica	Prupe.5G002300_v2.0.a1
pyrus_communis	pycom06g00160 pycom16g26290
rosa_chinensis	RchiOBHm_Chr7g0217411
rosa_laevigata	RLG00000002479
rosa_multiflora	Rmu_sc0000145.1_g000013
rosa_roxburghii	Rroxscaffold_3G00242100
rosa_rugosa	Rorug07G0169000
rosa_samantha	Rh7AG308600 Rh7BG299300 Rh7CG328000 Rh7DG307900
rosa_wichuraiana	Rw7G026170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	3043
Acc36I	ACCTGC	1 cut(s)	591
AccB1I	GGYRCC	2 cut(s)	14, 2066
AccB7I	CCANNNNNTGG	3 cut(s)	189, 1959, 3179
AccI	GTMKAC	2 cut(s)	894, 1713
AccII	CGCG	3 cut(s)	74, 114, 2138
AccIII	TCCGGA	1 cut(s)	425
AclWI	GGATC	7 cut(s)	436, 495, 1622, 1644, 1670, 1683, 2438
AcoI	YGGCCR	2 cut(s)	93, 2013
AcuI	CTGAAG	5 cut(s)	335, 839, 927, 1320, 3080
AfaI	GTAC	5 cut(s)	262, 834, 1198, 1642, 2515
AfiI	CCNNNNNNNGG	9 cut(s)	189, 330, 694, 728, 920, 1535, 1959, 2373, 3179
AflIII	ACRYGT	1 cut(s)	1840
AhlI	ACTAGT	1 cut(s)	743
AjuI	GAANNNNNNNTTGG	4 cut(s)	916, 948, 1297, 1329
AleI	CACNNNNGTG	1 cut(s)	323
Alw21I	GWGCWC	2 cut(s)	320, 3085
Alw26I	GTCTC	7 cut(s)	646, 1215, 1238, 1371, 2306, 2499, 2853
AlwI	GGATC	7 cut(s)	436, 495, 1622, 1644, 1670, 1683, 2438
AlwNI	CAGNNNCTG	2 cut(s)	1427, 1871
Ama87I	CYCGRG	2 cut(s)	176, 1248
Aor13HI	TCCGGA	1 cut(s)	425
ArsI	GACNNNNNNTTYG	2 cut(s)	1066, 1098
AseI	ATTAAT	1 cut(s)	2658
Asp700I	GAANNNNTTC	2 cut(s)	348, 2385
AspLEI	GCGC	3 cut(s)	76, 114, 3044
AsuC2I	CCSGG	6 cut(s)	177, 178, 435, 2017, 2187, 2615
AsuHPI	GGTGA	7 cut(s)	599, 1275, 1371, 1599, 1968, 2533, 2680
AvaI	CYCGRG	2 cut(s)	176, 1248
AvaII	GGWCC	7 cut(s)	180, 418, 423, 1136, 1774, 1834, 2714
AxyI	CCTNAGG	3 cut(s)	693, 1287, 1632
BaeGI	GKGCMC	1 cut(s)	19
BamHI	GGATCC	1 cut(s)	1675
BanI	GGYRCC	2 cut(s)	14, 2066
BanII	GRGCYC	1 cut(s)	279
Bbv12I	GWGCWC	2 cut(s)	320, 3085
BccI	CCATC	9 cut(s)	250, 722, 1378, 1618, 1744, 1928, 2300, 2549, 2828
BceAI	ACGGC	4 cut(s)	308, 501, 838, 2454
BciVI	GTATCC	1 cut(s)	3014
BclI	TGATCA	2 cut(s)	1600, 2250
BcnI	CCSGG	6 cut(s)	177, 178, 435, 2017, 2187, 2615
BcoDI	GTCTC	7 cut(s)	646, 1215, 1238, 1371, 2306, 2499, 2853
BcuI	ACTAGT	1 cut(s)	743
BfmI	CTRYAG	2 cut(s)	1215, 2272
BfuAI	ACCTGC	1 cut(s)	591
BfuI	GTATCC	1 cut(s)	3014
BglII	AGATCT	1 cut(s)	961
BlpI	GCTNAGC	1 cut(s)	567
BmcAI	AGTACT	1 cut(s)	1198
Bme18I	GGWCC	7 cut(s)	180, 418, 423, 1136, 1774, 1834, 2714
BmeT110I	CYCGRG	2 cut(s)	176, 1248
BmsI	GCATC	8 cut(s)	407, 564, 1825, 2167, 2189, 2251, 2577, 2767
BoxI	GACNNNNGTC	1 cut(s)	1250
BplI	GAGNNNNNCTC	6 cut(s)	834, 866, 1144, 1176, 1973, 2005
BpmI	CTGGAG	3 cut(s)	324, 744, 3008
Bpu1102I	GCTNAGC	1 cut(s)	567
BpuEI	CTTGAG	4 cut(s)	691, 1146, 3069, 3181
BpuMI	CCSGG	6 cut(s)	177, 178, 435, 2017, 2187, 2615
BsaAI	YACGTR	1 cut(s)	2085
BsaBI	GATNNNNATC	2 cut(s)	1674, 2346
BsaI	GGTCTC	1 cut(s)	1371
BsaWI	WCCGGW	2 cut(s)	420, 425
Bsc4I	CCNNNNNNNGG	9 cut(s)	189, 330, 694, 728, 920, 1535, 1959, 2373, 3179
Bse118I	RCCGGY	2 cut(s)	76, 391
Bse1I	ACTGG	6 cut(s)	246, 840, 890, 1207, 1314, 1648
Bse21I	CCTNAGG	3 cut(s)	693, 1287, 1632
Bse3DI	GCAATG	3 cut(s)	878, 1697, 2077
Bse8I	GATNNNNATC	2 cut(s)	1674, 2346
BseAI	TCCGGA	1 cut(s)	425
BseGI	GGATG	6 cut(s)	340, 398, 703, 1297, 2592, 2839
BseJI	GATNNNNATC	2 cut(s)	1674, 2346
BseLI	CCNNNNNNNGG	9 cut(s)	189, 330, 694, 728, 920, 1535, 1959, 2373, 3179
BseMI	GCAATG	3 cut(s)	878, 1697, 2077
BseMII	CTCAG	6 cut(s)	240, 684, 1278, 1646, 2289, 3198
BseNI	ACTGG	6 cut(s)	246, 840, 890, 1207, 1314, 1648
BseRI	GAGGAG	7 cut(s)	401, 1149, 1270, 1373, 1540, 1551, 2813
BseSI	GKGCMC	1 cut(s)	19
BseYI	CCCAGC	3 cut(s)	210, 687, 1178
BsgI	GTGCAG	2 cut(s)	616, 2653
Bsh1236I	CGCG	3 cut(s)	74, 114, 2138
BshNI	GGYRCC	2 cut(s)	14, 2066
BsiHKAI	GWGCWC	2 cut(s)	320, 3085
BsiHKCI	CYCGRG	2 cut(s)	176, 1248
BslFI	GGGAC	4 cut(s)	193, 227, 1708, 1981
BslI	CCNNNNNNNGG	9 cut(s)	189, 330, 694, 728, 920, 1535, 1959, 2373, 3179
BsmAI	GTCTC	7 cut(s)	646, 1215, 1238, 1371, 2306, 2499, 2853
BsmFI	GGGAC	4 cut(s)	193, 227, 1708, 1981
BsmI	GAATGC	1 cut(s)	2821
Bso31I	GGTCTC	1 cut(s)	1371
BsoBI	CYCGRG	2 cut(s)	176, 1248
Bsp1286I	GDGCHC	4 cut(s)	19, 279, 320, 3085
Bsp13I	TCCGGA	1 cut(s)	425
Bsp1720I	GCTNAGC	1 cut(s)	567
Bsp19I	CCATGG	2 cut(s)	96, 1002
BspCNI	CTCAG	6 cut(s)	241, 685, 1279, 1645, 2290, 3197
BspEI	TCCGGA	1 cut(s)	425
BspFNI	CGCG	3 cut(s)	74, 114, 2138
BspHI	TCATGA	2 cut(s)	2173, 2350
BspMI	ACCTGC	1 cut(s)	591
BspPI	GGATC	7 cut(s)	436, 495, 1622, 1644, 1670, 1683, 2438
BspQI	GCTCTTC	2 cut(s)	308, 2420
BspT107I	GGYRCC	2 cut(s)	14, 2066
BspTNI	GGTCTC	1 cut(s)	1371
BsrDI	GCAATG	3 cut(s)	878, 1697, 2077
BsrFI	RCCGGY	2 cut(s)	76, 391
BsrI	ACTGG	6 cut(s)	246, 840, 890, 1207, 1314, 1648
BssAI	RCCGGY	2 cut(s)	76, 391
BssNAI	GTATAC	1 cut(s)	1714
BssT1I	CCWWGG	3 cut(s)	96, 552, 1002
Bst1107I	GTATAC	1 cut(s)	1714
Bst6I	CTCTTC	8 cut(s)	308, 629, 1145, 1339, 1406, 2420, 2440, 2739
BstBAI	YACGTR	1 cut(s)	2085
BstC8I	GCNNGC	8 cut(s)	78, 393, 590, 1579, 2819, 2905, 3092, 3123
BstDSI	CCRYGG	3 cut(s)	96, 324, 1002
BstEII	GGTNACC	1 cut(s)	2935
BstF5I	GGATG	6 cut(s)	340, 398, 703, 1297, 2592, 2839
BstFNI	CGCG	3 cut(s)	74, 114, 2138
BstHHI	GCGC	3 cut(s)	76, 114, 3044
BstMAI	GTCTC	7 cut(s)	646, 1215, 1238, 1371, 2306, 2499, 2853
BstNSI	RCATGY	1 cut(s)	1119
BstPAI	GACNNNNGTC	1 cut(s)	1250
BstPI	GGTNACC	1 cut(s)	2935
BstSFI	CTRYAG	2 cut(s)	1215, 2272
BstSLI	GKGCMC	1 cut(s)	19
BstUI	CGCG	3 cut(s)	74, 114, 2138
BstX2I	RGATCY	5 cut(s)	428, 487, 961, 1675, 2430
BstXI	CCANNNNNNTGG	3 cut(s)	204, 241, 1133
BstYI	RGATCY	5 cut(s)	428, 487, 961, 1675, 2430
BstZ17I	GTATAC	1 cut(s)	1714
Bsu36I	CCTNAGG	3 cut(s)	693, 1287, 1632
BsuI	GTATCC	1 cut(s)	3014
BtgI	CCRYGG	3 cut(s)	96, 324, 1002
BtgZI	GCGATG	1 cut(s)	497
BtsCI	GGATG	6 cut(s)	340, 398, 703, 1297, 2592, 2839
BtsI	GCAGTG	3 cut(s)	599, 2332, 2683
BtsIMutI	CAGTG	8 cut(s)	239, 246, 599, 1102, 1397, 1425, 2332, 2683
BveI	ACCTGC	1 cut(s)	591
Cac8I	GCNNGC	8 cut(s)	78, 393, 590, 1579, 2819, 2905, 3092, 3123
CaiI	CAGNNNCTG	2 cut(s)	1427, 1871
CciI	TCATGA	2 cut(s)	2173, 2350
CfoI	GCGC	3 cut(s)	76, 114, 3044
Cfr10I	RCCGGY	2 cut(s)	76, 391
Cfr9I	CCCGGG	1 cut(s)	176
CpoI	CGGWCCG	1 cut(s)	423
CseI	GACGC	3 cut(s)	80, 984, 3089
CsiI	ACCWGGT	2 cut(s)	1830, 2716
Csp6I	GTAC	5 cut(s)	261, 833, 1197, 1641, 2514
CspCI	CAANNNNNGTGG	2 cut(s)	727, 762
CspI	CGGWCCG	1 cut(s)	423
CviQI	GTAC	5 cut(s)	261, 833, 1197, 1641, 2514
DraI	TTTAAA	2 cut(s)	930, 1660
EaeI	YGGCCR	2 cut(s)	93, 2013
Eam1104I	CTCTTC	8 cut(s)	308, 629, 1145, 1339, 1406, 2420, 2440, 2739
EarI	CTCTTC	8 cut(s)	308, 629, 1145, 1339, 1406, 2420, 2440, 2739
Eco130I	CCWWGG	3 cut(s)	96, 552, 1002
Eco147I	AGGCCT	2 cut(s)	1156, 1762
Eco24I	GRGCYC	1 cut(s)	279
Eco31I	GGTCTC	1 cut(s)	1371
Eco47I	GGWCC	7 cut(s)	180, 418, 423, 1136, 1774, 1834, 2714
Eco57I	CTGAAG	5 cut(s)	335, 839, 927, 1320, 3080
Eco81I	CCTNAGG	3 cut(s)	693, 1287, 1632
Eco88I	CYCGRG	2 cut(s)	176, 1248
Eco91I	GGTNACC	1 cut(s)	2935
EcoO109I	RGGNCCY	1 cut(s)	556
EcoO65I	GGTNACC	1 cut(s)	2935
EcoRI	GAATTC	1 cut(s)	1621
EcoT14I	CCWWGG	3 cut(s)	96, 552, 1002
EcoT22I	ATGCAT	1 cut(s)	2182
EcoT38I	GRGCYC	1 cut(s)	279
ErhI	CCWWGG	3 cut(s)	96, 552, 1002
FalI	AAGNNNNNCTT	4 cut(s)	2419, 2451, 3078, 3110
FaqI	GGGAC	4 cut(s)	193, 227, 1708, 1981
FauI	CCCGC	2 cut(s)	618, 652
FauNDI	CATATG	2 cut(s)	2854, 2973
FbaI	TGATCA	2 cut(s)	1600, 2250
FblI	GTMKAC	2 cut(s)	894, 1713
FokI	GGATG	6 cut(s)	347, 385, 710, 1304, 2599, 2846
FriOI	GRGCYC	1 cut(s)	279
FspI	TGCGCA	1 cut(s)	3043
GlaI	GCGC	3 cut(s)	75, 113, 3043
GsaI	CCCAGC	3 cut(s)	214, 691, 1182
GsuI	CTGGAG	3 cut(s)	324, 744, 3008
HgaI	GACGC	3 cut(s)	80, 984, 3089
HhaI	GCGC	3 cut(s)	76, 114, 3044
Hin6I	GCGC	3 cut(s)	74, 112, 3042
HinP1I	GCGC	3 cut(s)	74, 112, 3042
HincII	GTYRAC	3 cut(s)	766, 999, 1113
HindII	GTYRAC	3 cut(s)	766, 999, 1113
HindIII	AAGCTT	2 cut(s)	939, 2161
HpaI	GTTAAC	1 cut(s)	1113
HphI	GGTGA	7 cut(s)	599, 1275, 1371, 1599, 1968, 2533, 2680
Hpy166II	GTNNAC	9 cut(s)	766, 791, 895, 999, 1113, 1301, 1471, 1714, 1976
Hpy8I	GTNNAC	9 cut(s)	766, 791, 895, 999, 1113, 1301, 1471, 1714, 1976
Hpy99I	CGWCG	2 cut(s)	74, 832
HpyAV	CCTTC	8 cut(s)	280, 359, 642, 672, 863, 1053, 1884, 2396
HpyCH4IV	ACGT	2 cut(s)	1840, 2084
HpySE526I	ACGT	2 cut(s)	1840, 2084
HspAI	GCGC	3 cut(s)	74, 112, 3042
Kpn2I	TCCGGA	1 cut(s)	425
KroI	GCCGGC	2 cut(s)	76, 391
KroNI	GCCGGC	2 cut(s)	78, 393
Ksp22I	TGATCA	2 cut(s)	1600, 2250
KspAI	GTTAAC	1 cut(s)	1113
LguI	GCTCTTC	2 cut(s)	308, 2420
LmnI	GCTCC	9 cut(s)	388, 855, 1283, 1538, 1553, 1813, 2983, 2989, 3196
LweI	GCATC	8 cut(s)	407, 564, 1825, 2167, 2189, 2251, 2577, 2767
MabI	ACCWGGT	2 cut(s)	1830, 2716
MaeII	ACGT	2 cut(s)	1840, 2084
MaeIII	GTNAC	9 cut(s)	536, 700, 1091, 1377, 1499, 1686, 2096, 2678, 2935
MfeI	CAATTG	1 cut(s)	2946
MflI	RGATCY	5 cut(s)	428, 487, 961, 1675, 2430
MhlI	GDGCHC	4 cut(s)	19, 279, 320, 3085
MlyI	GAGTC	8 cut(s)	67, 544, 1240, 1260, 1472, 1690, 2303, 2585
MmeI	TCCRAC	3 cut(s)	1416, 1861, 2095
Mph1103I	ATGCAT	1 cut(s)	2182
MreI	CGCCGGCG	1 cut(s)	76
MroI	TCCGGA	1 cut(s)	425
MroNI	GCCGGC	2 cut(s)	76, 391
MroXI	GAANNNNTTC	2 cut(s)	348, 2385
MseI	TTAA	8 cut(s)	929, 1112, 1659, 1853, 1985, 2609, 2658, 2942
MslI	CAYNNNNRTG	6 cut(s)	251, 323, 1932, 2087, 2213, 2355
MspA1I	CMGCKG	4 cut(s)	189, 355, 1133, 1178
MssI	GTTTAAAC	1 cut(s)	1660
MunI	CAATTG	1 cut(s)	2946
Mva1269I	GAATGC	1 cut(s)	2821
MvnI	CGCG	3 cut(s)	74, 114, 2138
NaeI	GCCGGC	2 cut(s)	78, 393
NciI	CCSGG	6 cut(s)	177, 178, 435, 2017, 2187, 2615
NcoI	CCATGG	2 cut(s)	96, 1002
NdeI	CATATG	2 cut(s)	2854, 2973
NgoMIV	GCCGGC	2 cut(s)	76, 391
NmeAIII	GCCGAG	1 cut(s)	186
NmuCI	GTSAC	4 cut(s)	536, 1091, 1377, 2678
NsbI	TGCGCA	1 cut(s)	3043
NsiI	ATGCAT	1 cut(s)	2182
NspI	RCATGY	1 cut(s)	1119
OliI	CACNNNNGTG	1 cut(s)	323
PaeR7I	CTCGAG	1 cut(s)	1248
PagI	TCATGA	2 cut(s)	2173, 2350
PceI	AGGCCT	2 cut(s)	1156, 1762
PciSI	GCTCTTC	2 cut(s)	308, 2420
PctI	GAATGC	1 cut(s)	2821
PdiI	GCCGGC	2 cut(s)	78, 393
PdmI	GAANNNNTTC	2 cut(s)	348, 2385
PfeI	GAWTC	8 cut(s)	358, 859, 916, 1223, 1868, 1942, 2074, 2284
PflFI	GACNNNGTC	1 cut(s)	1427
PflMI	CCANNNNNTGG	3 cut(s)	189, 1959, 3179
PleI	GAGTC	8 cut(s)	66, 543, 1240, 1259, 1472, 1689, 2302, 2584
PmeI	GTTTAAAC	1 cut(s)	1660
PpsI	GAGTC	8 cut(s)	66, 543, 1240, 1259, 1472, 1689, 2302, 2584
Ppu21I	YACGTR	1 cut(s)	2085
PshAI	GACNNNNGTC	1 cut(s)	1250
PshBI	ATTAAT	1 cut(s)	2658
PspEI	GGTNACC	1 cut(s)	2935
PspFI	CCCAGC	3 cut(s)	210, 687, 1178
PspXI	VCTCGAGB	1 cut(s)	1248
PstNI	CAGNNNCTG	2 cut(s)	1427, 1871
PsuI	RGATCY	5 cut(s)	428, 487, 961, 1675, 2430
PsyI	GACNNNGTC	1 cut(s)	1427
PvuII	CAGCTG	4 cut(s)	189, 355, 1133, 1178
RsaI	GTAC	5 cut(s)	262, 834, 1198, 1642, 2515
RsaNI	GTAC	5 cut(s)	261, 833, 1197, 1641, 2514
RseI	CAYNNNNRTG	6 cut(s)	251, 323, 1932, 2087, 2213, 2355
Rsr2I	CGGWCCG	1 cut(s)	423
RsrII	CGGWCCG	1 cut(s)	423
SapI	GCTCTTC	2 cut(s)	308, 2420
SaqAI	TTAA	8 cut(s)	929, 1112, 1659, 1853, 1985, 2609, 2658, 2942
ScaI	AGTACT	1 cut(s)	1198
SchI	GAGTC	8 cut(s)	67, 544, 1240, 1260, 1472, 1690, 2303, 2585
SduI	GDGCHC	4 cut(s)	19, 279, 320, 3085
SexAI	ACCWGGT	2 cut(s)	1830, 2716
SfaNI	GCATC	8 cut(s)	407, 564, 1825, 2167, 2189, 2251, 2577, 2767
SfcI	CTRYAG	2 cut(s)	1215, 2272
Sfr274I	CTCGAG	1 cut(s)	1248
SgrAI	CRCCGGYG	1 cut(s)	76
SinI	GGWCC	7 cut(s)	180, 418, 423, 1136, 1774, 1834, 2714
SlaI	CTCGAG	1 cut(s)	1248
SmaI	CCCGGG	1 cut(s)	178
SmiI	ATTTAAAT	1 cut(s)	930
SmiMI	CAYNNNNRTG	6 cut(s)	251, 323, 1932, 2087, 2213, 2355
SmlI	CTYRAG	5 cut(s)	706, 1161, 1248, 3084, 3160
SmoI	CTYRAG	5 cut(s)	706, 1161, 1248, 3084, 3160
SpeI	ACTAGT	1 cut(s)	743
SseBI	AGGCCT	2 cut(s)	1156, 1762
StuI	AGGCCT	2 cut(s)	1156, 1762
StyI	CCWWGG	3 cut(s)	96, 552, 1002
SwaI	ATTTAAAT	1 cut(s)	930
TaiI	ACGT	2 cut(s)	1843, 2087
TaqI	TCGA	3 cut(s)	56, 1249, 2553
TatI	WGTACW	2 cut(s)	1196, 2513
TauI	GCSGC	9 cut(s)	83, 86, 89, 92, 95, 299, 398, 1808, 2365
TfiI	GAWTC	8 cut(s)	358, 859, 916, 1223, 1868, 1942, 2074, 2284
Tru1I	TTAA	8 cut(s)	929, 1112, 1659, 1853, 1985, 2609, 2658, 2942
Tru9I	TTAA	8 cut(s)	929, 1112, 1659, 1853, 1985, 2609, 2658, 2942
TscAI	CASTG	8 cut(s)	246, 253, 599, 1102, 1404, 1432, 2332, 2683
TseFI	GTSAC	4 cut(s)	536, 1091, 1377, 2678
Tsp45I	GTSAC	4 cut(s)	536, 1091, 1377, 2678
TspMI	CCCGGG	1 cut(s)	176
TspRI	CASTG	8 cut(s)	246, 253, 599, 1102, 1404, 1432, 2332, 2683
Tth111I	GACNNNGTC	1 cut(s)	1427
Van91I	CCANNNNNTGG	3 cut(s)	189, 1959, 3179
VpaK11BI	GGWCC	7 cut(s)	180, 418, 423, 1136, 1774, 1834, 2714
VspI	ATTAAT	1 cut(s)	2658
XbaI	TCTAGA	1 cut(s)	2533
XceI	RCATGY	1 cut(s)	1119
XhoI	CTCGAG	1 cut(s)	1248
XmaI	CCCGGG	1 cut(s)	176
XmiI	GTMKAC	2 cut(s)	894, 1713
XmnI	GAANNNNTTC	2 cut(s)	348, 2385
ZrmI	AGTACT	1 cut(s)	1198
Zsp2I	ATGCAT	1 cut(s)	2182

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.