Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0008543

Physical Location & Seq

Genomic Coordinates Forward (+)

36014003 .. 36020563

Gene Structure 6561 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG307900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGAAATGGCGTATGAAAATCTATGTTGGTTACCTGCTCTATGTTTGTTTTTGCAGGTTTCACCCGCTTTCAGAGTTTGATGAGGGGAAGAGAAGTTGCAGAAGGAGACTTGCGGGGCATAACAGGCGAAGAAGGAAAACCCAGCCTGAGGATGTTACCTCAAGGCTCACTATCCCTGGAGATGGGGATAACAAAACTAGTGGAAATTTGGATATTGTCAACTTGTTAGCTGCTATAACTCGTCCACAGGGGAAAAATGATGTCCGAACCACCAACGGCTCGTCGGTACTGGACAGAGAGCAGCTCCTTCAGATTCTTAGTAAGATAAATTCATTGCCTTTGCCAGTAGACCTTGCTGCCAAGTTGCCGAATCTCGGAAATTTAAATTGGAAAGCTTCAGACCTACTTTCTTTAGATCTTCAAAACAAATTGAATGGAAAAACATCTGCGTCAACCATGGACTTGATTACTGTTCTTTCAGCTACTCTAGCAGCACCTTCTTCTGACACACTTGCTATGTTACCTCAAAAGAGCAGTCAGAGTAGTGACAGTGAGAAAACTAAGTTAACATGCTCTGACCAGGCAGCTGGTCCTAATTTGCAGAAGAGGCCTCCTCAAGAGTTTCATTCAGCTGGGGGAGAGAGAAGTAGTACTAGCTACCAGTCTCCTACAGAAGATTCAGACTGCCAGGTTCAAGAGACTCGGGTCAAATTACCTTTACAGCTATTCAGCTCCTCACCTGAGGATGACAGTCCACCAAAACTGGCTTCTTCCAGAAAGTATTTCTCTTCAGACAGTAGTAATCGCACAGAGGAGAGGTCTCCATCATCGTCACCTCCTGTAATGCAAACACTGTTTCCAATGAAGAGTATGGCAGACACTGTCAAGTCGGAGAAACTTTCAATAAGCAAAGATTTGAATGTGAACCTGGACTCTAGCATGAACGGTGGTAGTAACTTGCCTTTTGATCTTTTTAGAGGGCCAAATAGAGGAGCTGTCAGCTCCTCCATTCAAAATTTTCCACACCAAGCTGGCTATACATCTTCTAGTTCTGATCATTCACCATCTAGCTTGAATTCTGATCCTCAGGATCGTACTGGAAGAATACTGTTTAAACTATTTGATAAGGATCCGAGTCAGTTACCAGGGACATTGCGGACACAGGTATACAGTTGGCTTTCTAACAGTCCATCTGAAATGGAGAGCTACATAAGGCCTGGCTGTGTGGTCCTATCAGTTTATGTGTCAATGTCATTTGCGGCCTGGGAGCATCTTGAAGAAAACCTGGTCCAACGTGTCAGTTCTTTAATACAGAGTTCAGATTCTGATTTTTGGAGAAGTGGAAGGTTTTTAGTAAATACAGGGAGGCAATTAGCTTCTCATAAAGATGGAAAGATTCGTCTATCCAAAGCCTGGACAACATTTAGTTCACCAGAGTTAATCTCTGTGTCCCCTTTGGCTGTCGTGGCCGGGCAAAAAACCTCTCTTTCAATAAGGGGTAGAAATCTGACTAATCTTGGCACCAAGATTCATTGCACGTATATGGGTGGTTACACATCAAAGGAAGTTGGAACAACATATCATGGAACCGCGTATGATGAGATAAATTTGGGAAGCTTTCAAATTCATGATGCATCTCCCGGTGTTCTAGGTCGCTGTTTCATAGAGGTGGAAAATGGTTTCAAGGGAAACAGCTTTCCTGTGATCATAGCTGATGCTACAATCTGTAGCGAATTGAATCTCATTGAGTCTGAGTTTGATGGGGAGACAAAGGTATGCAGTGCAATTTCAGAAGATGAAAATCATGATTATGGGCGGCCCAGGTCAAGGGAGGAAGTCCTTCACTTTCTGAACGAGCTAGGTTGGCTCTTCCAAAGGAAAAAGATCTCTTCCATGTTTCAAGGGTCCGGCTACTCTCTTAGCCGTTTCAAATTTTTACTCACATTCACAGTTGAGAGAGACTGTTGTACTTTGGTGAAAACACTTCTAGACATATTGGTAAATTTCGATGGGAATGAGCTATCAAGAGAGTCATTGGGGATGCTGTCAGATGTCCAGCTATTAAACCGGGCTGTAAAAAGGAGGTGCAGGAAGATGATTGACTTGCTTATTAATTATTCTGTGATTAGCAGTGACAAGAGATACATTTTTCCTCCAAATCTTGCTGGACCTGGTGGCCTGACACCTCTTCATTTGGCTGCTTCTTTGTCAAATTCGGAGGATATGATTGATGCTTTGACGAATGACCCAGAGGAGATCGGATTGAACTGCTGGCATTCCCTTTTGGATGGTAACGGGCAGTCTCCATATGCTTATGCTATGATGAGGAATAATTACTCTTACAACAATCTGGTGGCTCGCAAACTTACTGACAGAAGAAATAGTCAGGTTACCTTAACAATTGGAAATGAGATAGAGCAAACCCATATGGCTATGGAGCTGGAGCGTAGGACAAGTATCCAATTCAGACAAGGTAGCAGATCATGTGCCAAATGCGCAGTTGCAGCAACAAAATACACCAGGAGGGTTCCTGGTGCTCAAGGCTTGCTTCAGCGTCCATTCATTCATTCTATGCTTGCCATAGCTGCTGTTTGTGTTTGTGTGTGCTTGTTCTTGAGAGGTTCCCCAGACATTGGCTCAGTTGCTCCTTTCAAGTGGGAGAATTTGGATTTTGGCACAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

894

Amino Acids

99.06

Weight (kDa)

8.54

Isoelectric Point (pI)

54.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	19 - 46	4e-08	SBP domain
Ig_SPL7	PF26102	476 - 580	1.6e-35	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20980 AT1G76580 AT1G76580 AT1G76580
fragaria_vesca	FvH4_5g26510 FvH4_5g26510 FvH4_5g26510 FvH4_5g26510
malus_domestica	MD00G1031600.v1.1 MD06G1001500.v1.1
prunus_persica	Prupe.5G002300_v2.0.a1
pyrus_communis	pycom06g00160 pycom16g26290
rosa_chinensis	RchiOBHm_Chr7g0217411
rosa_laevigata	RLG00000002479
rosa_multiflora	Rmu_sc0000145.1_g000013
rosa_roxburghii	Rroxscaffold_3G00242100
rosa_rugosa	Rorug07G0169000
rosa_samantha	Rh7AG308600 Rh7BG299300 Rh7CG328000 Rh7DG307900
rosa_wichuraiana	Rw7G026170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2497
Acc36I	ACCTGC	2 cut(s)	42, 45
AccB1I	GGYRCC	1 cut(s)	1520
AccB7I	CCANNNNNTGG	2 cut(s)	1413, 2633
AccI	GTMKAC	2 cut(s)	348, 1167
AccII	CGCG	1 cut(s)	1592
AciI	CCGC	6 cut(s)	65, 113, 1156, 1259, 1590, 1816
AclWI	GGATC	4 cut(s)	1076, 1098, 1124, 1137
AcoI	YGGCCR	1 cut(s)	1467
AcuI	CTGAAG	4 cut(s)	293, 381, 774, 2534
AfaI	GTAC	4 cut(s)	288, 652, 1096, 1969
AfiI	CCNNNNNNNGG	7 cut(s)	148, 182, 374, 989, 1413, 1827, 2633
AflIII	ACRYGT	1 cut(s)	1294
AhlI	ACTAGT	1 cut(s)	197
AjuI	GAANNNNNNNTTGG	4 cut(s)	370, 402, 751, 783
Alw21I	GWGCWC	1 cut(s)	2539
Alw26I	GTCTC	7 cut(s)	100, 669, 692, 825, 1760, 1953, 2307
AlwI	GGATC	4 cut(s)	1076, 1098, 1124, 1137
AlwNI	CAGNNNCTG	2 cut(s)	881, 1325
Ama87I	CYCGRG	1 cut(s)	702
AoxI	GGCC	7 cut(s)	608, 980, 1214, 1260, 1467, 1817, 2176
ApeKI	GCWGC	8 cut(s)	230, 301, 356, 491, 584, 2198, 2504, 2585
ArsI	GACNNNNNNTTYG	2 cut(s)	520, 552
AseI	ATTAAT	1 cut(s)	2112
Asp700I	GAANNNNTTC	1 cut(s)	1839
AspLEI	GCGC	1 cut(s)	2498
AspS9I	GGNCC	7 cut(s)	590, 980, 1228, 1288, 1818, 1905, 2168
AsuC2I	CCSGG	3 cut(s)	1471, 1641, 2069
AsuHPI	GGTGA	6 cut(s)	53, 729, 825, 1053, 1422, 1987
AvaI	CYCGRG	1 cut(s)	702
AvaII	GGWCC	5 cut(s)	590, 1228, 1288, 1905, 2168
AxyI	CCTNAGG	3 cut(s)	147, 741, 1086
BamHI	GGATCC	1 cut(s)	1129
BanI	GGYRCC	1 cut(s)	1520
Bbv12I	GWGCWC	1 cut(s)	2539
BbvI	GCAGC	8 cut(s)	217, 313, 343, 503, 596, 2185, 2516, 2572
BccI	CCATC	8 cut(s)	176, 832, 1072, 1198, 1382, 1754, 2003, 2282
BceAI	ACGGC	2 cut(s)	292, 1908
BciVI	GTATCC	1 cut(s)	2468
BclI	TGATCA	2 cut(s)	1054, 1704
BcnI	CCSGG	3 cut(s)	1471, 1641, 2069
BcoDI	GTCTC	7 cut(s)	100, 669, 692, 825, 1760, 1953, 2307
BcuI	ACTAGT	1 cut(s)	197
BfaI	CTAG	9 cut(s)	198, 488, 654, 936, 1047, 1068, 1649, 1859, 1988
BfmI	CTRYAG	2 cut(s)	669, 1726
BfuAI	ACCTGC	2 cut(s)	42, 45
BfuI	GTATCC	1 cut(s)	2468
BglII	AGATCT	2 cut(s)	415, 1884
BmcAI	AGTACT	1 cut(s)	652
Bme18I	GGWCC	5 cut(s)	590, 1228, 1288, 1905, 2168
BmeT110I	CYCGRG	1 cut(s)	702
BmgT120I	GGNCC	7 cut(s)	590, 980, 1228, 1288, 1818, 1905, 2168
BmiI	GGNNCC	6 cut(s)	1131, 1522, 1588, 1906, 2529, 2623
BmsI	GCATC	6 cut(s)	1279, 1621, 1643, 1705, 2031, 2221
BoxI	GACNNNNGTC	1 cut(s)	704
BplI	GAGNNNNNCTC	6 cut(s)	288, 320, 598, 630, 1427, 1459
BpmI	CTGGAG	2 cut(s)	198, 2462
BpuEI	CTTGAG	4 cut(s)	145, 600, 2523, 2635
BpuMI	CCSGG	3 cut(s)	1471, 1641, 2069
BsaAI	YACGTR	1 cut(s)	1539
BsaBI	GATNNNNATC	2 cut(s)	1128, 1800
BsaI	GGTCTC	1 cut(s)	825
BsaJI	CCNNGG	5 cut(s)	175, 456, 1145, 1263, 1820
Bsc4I	CCNNNNNNNGG	7 cut(s)	148, 182, 374, 989, 1413, 1827, 2633
Bse1I	ACTGG	5 cut(s)	294, 344, 661, 768, 1102
Bse21I	CCTNAGG	3 cut(s)	147, 741, 1086
Bse3DI	GCAATG	3 cut(s)	332, 1151, 1531
Bse8I	GATNNNNATC	2 cut(s)	1128, 1800
BseDI	CCNNGG	5 cut(s)	175, 456, 1145, 1263, 1820
BseGI	GGATG	4 cut(s)	157, 751, 2046, 2293
BseJI	GATNNNNATC	2 cut(s)	1128, 1800
BseLI	CCNNNNNNNGG	7 cut(s)	148, 182, 374, 989, 1413, 1827, 2633
BseMI	GCAATG	3 cut(s)	332, 1151, 1531
BseMII	CTCAG	5 cut(s)	138, 732, 1100, 1743, 2652
BseNI	ACTGG	5 cut(s)	294, 344, 661, 768, 1102
BseRI	GAGGAG	6 cut(s)	603, 724, 827, 994, 1005, 2267
BseXI	GCAGC	8 cut(s)	217, 313, 343, 503, 596, 2185, 2516, 2572
BseYI	CCCAGC	2 cut(s)	141, 632
BsgI	GTGCAG	1 cut(s)	2107
Bsh1236I	CGCG	1 cut(s)	1592
BshFI	GGCC	7 cut(s)	610, 982, 1216, 1262, 1469, 1819, 2178
BshNI	GGYRCC	1 cut(s)	1520
BsiHKAI	GWGCWC	1 cut(s)	2539
BsiHKCI	CYCGRG	1 cut(s)	702
BsiSI	CCGG	4 cut(s)	1470, 1641, 1908, 2068
BslFI	GGGAC	2 cut(s)	1162, 1435
BslI	CCNNNNNNNGG	7 cut(s)	148, 182, 374, 989, 1413, 1827, 2633
BsmAI	GTCTC	7 cut(s)	100, 669, 692, 825, 1760, 1953, 2307
BsmFI	GGGAC	2 cut(s)	1162, 1435
BsmI	GAATGC	1 cut(s)	2275
BsnI	GGCC	7 cut(s)	610, 982, 1216, 1262, 1469, 1819, 2178
Bso31I	GGTCTC	1 cut(s)	825
BsoBI	CYCGRG	1 cut(s)	702
Bsp1286I	GDGCHC	1 cut(s)	2539
Bsp19I	CCATGG	1 cut(s)	456
BspACI	CCGC	6 cut(s)	65, 113, 1156, 1259, 1590, 1816
BspANI	GGCC	7 cut(s)	610, 982, 1216, 1262, 1469, 1819, 2178
BspCNI	CTCAG	5 cut(s)	139, 733, 1099, 1744, 2651
BspFNI	CGCG	1 cut(s)	1592
BspHI	TCATGA	2 cut(s)	1627, 1804
BspLI	GGNNCC	6 cut(s)	1131, 1522, 1588, 1906, 2529, 2623
BspMI	ACCTGC	2 cut(s)	42, 45
BspPI	GGATC	4 cut(s)	1076, 1098, 1124, 1137
BspQI	GCTCTTC	1 cut(s)	1874
BspT107I	GGYRCC	1 cut(s)	1520
BspTNI	GGTCTC	1 cut(s)	825
BsrDI	GCAATG	3 cut(s)	332, 1151, 1531
BsrI	ACTGG	5 cut(s)	294, 344, 661, 768, 1102
BssECI	CCNNGG	5 cut(s)	175, 456, 1145, 1263, 1820
BssNAI	GTATAC	1 cut(s)	1168
BssT1I	CCWWGG	1 cut(s)	456
Bst1107I	GTATAC	1 cut(s)	1168
Bst6I	CTCTTC	7 cut(s)	83, 599, 793, 860, 1874, 1894, 2193
BstBAI	YACGTR	1 cut(s)	1539
BstC8I	GCNNGC	5 cut(s)	1033, 2273, 2359, 2546, 2577
BstDEI	CTNAG	8 cut(s)	147, 317, 561, 741, 1086, 1752, 1919, 2638
BstDSI	CCRYGG	1 cut(s)	456
BstEII	GGTNACC	2 cut(s)	29, 2389
BstF5I	GGATG	4 cut(s)	157, 751, 2046, 2293
BstFNI	CGCG	1 cut(s)	1592
BstHHI	GCGC	1 cut(s)	2498
BstMAI	GTCTC	7 cut(s)	100, 669, 692, 825, 1760, 1953, 2307
BstMWI	GCNNNNNNNGC	8 cut(s)	124, 488, 607, 1466, 1864, 2495, 2504, 2585
BstNSI	RCATGY	1 cut(s)	573
BstPAI	GACNNNNGTC	1 cut(s)	704
BstPI	GGTNACC	2 cut(s)	29, 2389
BstSFI	CTRYAG	2 cut(s)	669, 1726
BstUI	CGCG	1 cut(s)	1592
BstV1I	GCAGC	8 cut(s)	217, 313, 343, 503, 596, 2185, 2516, 2572
BstX2I	RGATCY	3 cut(s)	415, 1129, 1884
BstXI	CCANNNNNNTGG	1 cut(s)	587
BstYI	RGATCY	3 cut(s)	415, 1129, 1884
BstZ17I	GTATAC	1 cut(s)	1168
Bsu36I	CCTNAGG	3 cut(s)	147, 741, 1086
BsuI	GTATCC	1 cut(s)	2468
BsuRI	GGCC	7 cut(s)	610, 982, 1216, 1262, 1469, 1819, 2178
BtgI	CCRYGG	1 cut(s)	456
BtsCI	GGATG	4 cut(s)	157, 751, 2046, 2293
BtsI	GCAGTG	2 cut(s)	1786, 2137
BtsIMutI	CAGTG	5 cut(s)	556, 851, 879, 1786, 2137
BveI	ACCTGC	2 cut(s)	42, 45
Cac8I	GCNNGC	5 cut(s)	1033, 2273, 2359, 2546, 2577
CaiI	CAGNNNCTG	2 cut(s)	881, 1325
CciI	TCATGA	2 cut(s)	1627, 1804
CfoI	GCGC	1 cut(s)	2498
Cfr13I	GGNCC	7 cut(s)	590, 980, 1228, 1288, 1818, 1905, 2168
CseI	GACGC	2 cut(s)	438, 2543
CsiI	ACCWGGT	2 cut(s)	1284, 2170
Csp6I	GTAC	4 cut(s)	287, 651, 1095, 1968
CspCI	CAANNNNNGTGG	2 cut(s)	181, 216
CviAII	CATG	8 cut(s)	457, 570, 940, 1583, 1628, 1805, 1894, 2484
CviQI	GTAC	4 cut(s)	287, 651, 1095, 1968
DdeI	CTNAG	8 cut(s)	147, 317, 561, 741, 1086, 1752, 1919, 2638
DraI	TTTAAA	2 cut(s)	384, 1114
EaeI	YGGCCR	1 cut(s)	1467
Eam1104I	CTCTTC	7 cut(s)	83, 599, 793, 860, 1874, 1894, 2193
EarI	CTCTTC	7 cut(s)	83, 599, 793, 860, 1874, 1894, 2193
Eco130I	CCWWGG	1 cut(s)	456
Eco147I	AGGCCT	2 cut(s)	610, 1216
Eco31I	GGTCTC	1 cut(s)	825
Eco47I	GGWCC	5 cut(s)	590, 1228, 1288, 1905, 2168
Eco57I	CTGAAG	4 cut(s)	293, 381, 774, 2534
Eco81I	CCTNAGG	3 cut(s)	147, 741, 1086
Eco88I	CYCGRG	1 cut(s)	702
Eco91I	GGTNACC	2 cut(s)	29, 2389
EcoO65I	GGTNACC	2 cut(s)	29, 2389
EcoRI	GAATTC	1 cut(s)	1075
EcoT14I	CCWWGG	1 cut(s)	456
EcoT22I	ATGCAT	1 cut(s)	1636
ErhI	CCWWGG	1 cut(s)	456
FaeI	CATG	8 cut(s)	460, 573, 943, 1586, 1631, 1808, 1897, 2487
FalI	AAGNNNNNCTT	2 cut(s)	2532, 2564
FaqI	GGGAC	2 cut(s)	1162, 1435
FatI	CATG	8 cut(s)	456, 569, 939, 1582, 1627, 1804, 1893, 2483
FauI	CCCGC	2 cut(s)	72, 106
FauNDI	CATATG	2 cut(s)	2308, 2427
FbaI	TGATCA	2 cut(s)	1054, 1704
FblI	GTMKAC	2 cut(s)	348, 1167
FokI	GGATG	4 cut(s)	164, 758, 2053, 2300
FspBI	CTAG	9 cut(s)	198, 488, 654, 936, 1047, 1068, 1649, 1859, 1988
FspI	TGCGCA	1 cut(s)	2497
GlaI	GCGC	1 cut(s)	2497
GsaI	CCCAGC	2 cut(s)	145, 636
GsuI	CTGGAG	2 cut(s)	198, 2462
HaeIII	GGCC	7 cut(s)	610, 982, 1216, 1262, 1469, 1819, 2178
HapII	CCGG	4 cut(s)	1470, 1641, 1908, 2068
HgaI	GACGC	2 cut(s)	438, 2543
HhaI	GCGC	1 cut(s)	2498
Hin1II	CATG	8 cut(s)	460, 573, 943, 1586, 1631, 1808, 1897, 2487
Hin6I	GCGC	1 cut(s)	2496
HinP1I	GCGC	1 cut(s)	2496
HincII	GTYRAC	3 cut(s)	220, 453, 567
HindII	GTYRAC	3 cut(s)	220, 453, 567
HindIII	AAGCTT	2 cut(s)	393, 1615
HpaI	GTTAAC	1 cut(s)	567
HpaII	CCGG	4 cut(s)	1470, 1641, 1908, 2068
HphI	GGTGA	6 cut(s)	53, 729, 825, 1053, 1422, 1987
Hpy166II	GTNNAC	9 cut(s)	220, 245, 349, 453, 567, 755, 925, 1168, 1430
Hpy8I	GTNNAC	9 cut(s)	220, 245, 349, 453, 567, 755, 925, 1168, 1430
Hpy99I	CGWCG	1 cut(s)	286
HpyAV	CCTTC	6 cut(s)	96, 126, 317, 507, 1338, 1850
HpyCH4IV	ACGT	2 cut(s)	1294, 1538
HpyF10VI	GCNNNNNNNGC	8 cut(s)	124, 488, 607, 1466, 1864, 2495, 2504, 2585
HpyF3I	CTNAG	8 cut(s)	147, 317, 561, 741, 1086, 1752, 1919, 2638
HpySE526I	ACGT	2 cut(s)	1294, 1538
Hsp92II	CATG	8 cut(s)	460, 573, 943, 1586, 1631, 1808, 1897, 2487
HspAI	GCGC	1 cut(s)	2496
Ksp22I	TGATCA	2 cut(s)	1054, 1704
KspAI	GTTAAC	1 cut(s)	567
LguI	GCTCTTC	1 cut(s)	1874
LmnI	GCTCC	8 cut(s)	309, 737, 992, 1007, 1267, 2437, 2443, 2650
Lsp1109I	GCAGC	8 cut(s)	217, 313, 343, 503, 596, 2185, 2516, 2572
LweI	GCATC	6 cut(s)	1279, 1621, 1643, 1705, 2031, 2221
MabI	ACCWGGT	2 cut(s)	1284, 2170
MaeI	CTAG	9 cut(s)	198, 488, 654, 936, 1047, 1068, 1649, 1859, 1988
MaeII	ACGT	2 cut(s)	1294, 1538
MfeI	CAATTG	1 cut(s)	2400
MflI	RGATCY	3 cut(s)	415, 1129, 1884
MhlI	GDGCHC	1 cut(s)	2539
MlyI	GAGTC	5 cut(s)	694, 926, 1144, 1757, 2039
MmeI	TCCRAC	3 cut(s)	870, 1315, 1549
Mph1103I	ATGCAT	1 cut(s)	1636
MroXI	GAANNNNTTC	1 cut(s)	1839
MseI	TTAA	8 cut(s)	383, 566, 1113, 1307, 1439, 2063, 2112, 2396
MslI	CAYNNNNRTG	4 cut(s)	1386, 1541, 1667, 1809
MspA1I	CMGCKG	2 cut(s)	587, 632
MspI	CCGG	4 cut(s)	1470, 1641, 1908, 2068
MssI	GTTTAAAC	1 cut(s)	1114
MunI	CAATTG	1 cut(s)	2400
Mva1269I	GAATGC	1 cut(s)	2275
MvnI	CGCG	1 cut(s)	1592
MwoI	GCNNNNNNNGC	8 cut(s)	124, 488, 607, 1466, 1864, 2495, 2504, 2585
NciI	CCSGG	3 cut(s)	1471, 1641, 2069
NcoI	CCATGG	1 cut(s)	456
NdeI	CATATG	2 cut(s)	2308, 2427
NlaIII	CATG	8 cut(s)	460, 573, 943, 1586, 1631, 1808, 1897, 2487
NlaIV	GGNNCC	6 cut(s)	1131, 1522, 1588, 1906, 2529, 2623
NmuCI	GTSAC	3 cut(s)	545, 831, 2132
NsbI	TGCGCA	1 cut(s)	2497
NsiI	ATGCAT	1 cut(s)	1636
NspI	RCATGY	1 cut(s)	573
PagI	TCATGA	2 cut(s)	1627, 1804
PceI	AGGCCT	2 cut(s)	610, 1216
PciSI	GCTCTTC	1 cut(s)	1874
PctI	GAATGC	1 cut(s)	2275
PdmI	GAANNNNTTC	1 cut(s)	1839
PfeI	GAWTC	7 cut(s)	313, 370, 677, 1322, 1396, 1528, 1738
PflFI	GACNNNGTC	1 cut(s)	881
PflMI	CCANNNNNTGG	2 cut(s)	1413, 2633
PleI	GAGTC	5 cut(s)	694, 926, 1143, 1756, 2038
PmeI	GTTTAAAC	1 cut(s)	1114
PpsI	GAGTC	5 cut(s)	694, 926, 1143, 1756, 2038
Ppu21I	YACGTR	1 cut(s)	1539
PshAI	GACNNNNGTC	1 cut(s)	704
PshBI	ATTAAT	1 cut(s)	2112
PspEI	GGTNACC	2 cut(s)	29, 2389
PspFI	CCCAGC	2 cut(s)	141, 632
PspN4I	GGNNCC	6 cut(s)	1131, 1522, 1588, 1906, 2529, 2623
PspPI	GGNCC	7 cut(s)	590, 980, 1228, 1288, 1818, 1905, 2168
PstNI	CAGNNNCTG	2 cut(s)	881, 1325
PsuI	RGATCY	3 cut(s)	415, 1129, 1884
PsyI	GACNNNGTC	1 cut(s)	881
PvuII	CAGCTG	2 cut(s)	587, 632
RsaI	GTAC	4 cut(s)	288, 652, 1096, 1969
RsaNI	GTAC	4 cut(s)	287, 651, 1095, 1968
RseI	CAYNNNNRTG	4 cut(s)	1386, 1541, 1667, 1809
SapI	GCTCTTC	1 cut(s)	1874
SaqAI	TTAA	8 cut(s)	383, 566, 1113, 1307, 1439, 2063, 2112, 2396
Sau96I	GGNCC	7 cut(s)	590, 980, 1228, 1288, 1818, 1905, 2168
ScaI	AGTACT	1 cut(s)	652
SchI	GAGTC	5 cut(s)	694, 926, 1144, 1757, 2039
SduI	GDGCHC	1 cut(s)	2539
SexAI	ACCWGGT	2 cut(s)	1284, 2170
SfaNI	GCATC	6 cut(s)	1279, 1621, 1643, 1705, 2031, 2221
SfcI	CTRYAG	2 cut(s)	669, 1726
SinI	GGWCC	5 cut(s)	590, 1228, 1288, 1905, 2168
SmiI	ATTTAAAT	1 cut(s)	384
SmiMI	CAYNNNNRTG	4 cut(s)	1386, 1541, 1667, 1809
SmlI	CTYRAG	4 cut(s)	160, 615, 2538, 2614
SmoI	CTYRAG	4 cut(s)	160, 615, 2538, 2614
SpeI	ACTAGT	1 cut(s)	197
SseBI	AGGCCT	2 cut(s)	610, 1216
SsiI	CCGC	6 cut(s)	65, 113, 1156, 1259, 1590, 1816
SspMI	CTAG	9 cut(s)	198, 488, 654, 936, 1047, 1068, 1649, 1859, 1988
StuI	AGGCCT	2 cut(s)	610, 1216
StyI	CCWWGG	1 cut(s)	456
SwaI	ATTTAAAT	1 cut(s)	384
TaiI	ACGT	2 cut(s)	1297, 1541
TaqI	TCGA	1 cut(s)	2007
TatI	WGTACW	2 cut(s)	650, 1967
TauI	GCSGC	2 cut(s)	1262, 1819
TfiI	GAWTC	7 cut(s)	313, 370, 677, 1322, 1396, 1528, 1738
Tru1I	TTAA	8 cut(s)	383, 566, 1113, 1307, 1439, 2063, 2112, 2396
Tru9I	TTAA	8 cut(s)	383, 566, 1113, 1307, 1439, 2063, 2112, 2396
TscAI	CASTG	5 cut(s)	556, 858, 886, 1786, 2137
TseFI	GTSAC	3 cut(s)	545, 831, 2132
TseI	GCWGC	8 cut(s)	230, 301, 356, 491, 584, 2198, 2504, 2585
Tsp45I	GTSAC	3 cut(s)	545, 831, 2132
TspRI	CASTG	5 cut(s)	556, 858, 886, 1786, 2137
Tth111I	GACNNNGTC	1 cut(s)	881
Van91I	CCANNNNNTGG	2 cut(s)	1413, 2633
VpaK11BI	GGWCC	5 cut(s)	590, 1228, 1288, 1905, 2168
VspI	ATTAAT	1 cut(s)	2112
XbaI	TCTAGA	1 cut(s)	1987
XceI	RCATGY	1 cut(s)	573
XmiI	GTMKAC	2 cut(s)	348, 1167
XmnI	GAANNNNTTC	1 cut(s)	1839
XspI	CTAG	9 cut(s)	198, 488, 654, 936, 1047, 1068, 1649, 1859, 1988
ZrmI	AGTACT	1 cut(s)	652
Zsp2I	ATGCAT	1 cut(s)	1636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.