Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0008543

Physical Location & Seq

Genomic Coordinates Forward (+)

28393215 .. 28399891

Gene Structure 6677 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG299300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2673 bp

ATGAAAATCTATGTTGGTTACCTGCTCTATGTTTGTTATTGCAGGTTTCACCCGCTTTCAGAGTTTGATGAGGGGAAGAGAAGTTGCAGAAGGAGACTTGCGGGGCATAACAGGCGAAGAAGGAAAACCCAGCCTGAGGATGTTACCTCAAGGCTCACTATCCCTGGAGATGGGGATAACAAAACTAGTGGAAATTTGGATATTGTCAACTTGTTAGCTGCTATAACTCGTCCACAGGGGAAAAATGATGTCCGAACTACCAACGGCTCGTCGGTACTGGACAGAGAGCAGCTCCTTCAGATTCTTAGTAAGATAAATTCATTGCCTTTGCCAGTAGACCTTGCTGCCAAGTTGCCGAATCTCGGAAATTTAAATTGGAAAGCTTCAGACCTACTTTCTTTAGATCTTCAAAACAAACTGAATGGAAAAACATCTGCGTCAACCATGGACTTGATTACTGTTCTTTCAGCTACTCTAGCAGCACCTTCTTCTGACACACTTGCTATGTTATCTCAAAAGAGCAGTCAGAGTAGTGACAGTGAGAAAACTAAGTTAACATGCTCTGACCAGGCAGCTGGTCCTAATTTGCAGAAGAGGCCTCCTCAAGAGTTTCATTCAGCTGGGGGAGAGAGAAGTAGTACTAGCTACCAGTCTCCTACAGAAGATTCAGACTGCCAGGTTCAAGAGACTCGAGTCAAATTACCTTTACAGCTATTCAGCTCCTCACCTGAGGATGACAGTCCACCAAAACTGGCTTCTTCCAGAAAGTATTTCTCTTCAGACAGTAGTAATCGCACAGAGGAGAGGTCTCCATCATCGTCACCTCCTGTAATGCAAACACTGTTTCCAATGAAGAGTATGGCAGACACTGTCAAGTCGGAGAAACTTTCAATAAGCAAAGATTTGAATGTGAACCTGGACTCTAGCATGAACGGTGGTAGTAACTTGCCTTTTGATCTTTTTCGAGGGCCAAATAGAGGAGCTGTCAGCTCCTCCATTCAAAATTTTCCACCCCAAGCTGGCTATACATCTTCTAGTTCTGATCATTCACCGTCTAGCTTGAATTCTGATCCTCAGGATCGTACTGGAAGAATACTGTTTAAACTATTTGATAAGGATCCGAGTCAGTTACCAGGGACATTGCGGACACAGGTATACAGTTGGCTTTCTAACAGTCCGTCTGAAATGGAGAGCTACATAAGGCCTGGCTGTGTGGTCCTATCAGTTTATGTGTCAATGTCATTTGCTGCCTGGGAGCATCTTGAAGAAAACCTGGTCCAACGTGTCAGTTCTTTAATACAAAGTTCAGATTCTGATTTTTGGAGAAGTGGAAGGTTTTTAGTAAATACAGGGAGGCAATTAGCTTCTCATAAAGATGGAAAGATTCGTCTATGCAAAGCCTGGACAACATTTAGTTCACCAGAGTTAATCTCTGTGTCCCCTTTGGCTGTCGTGGGCGGGCAAAAAACCTCTCTTTCAATAAGGGGTAGAAATCTGACTAATCTTGGCACCAAGATTCATTGCACGTATATGGGTGGTTACACATCAAAGGAAGTTGGAACAACATATCATGGAACCGAGTATGATGAGATAAATTTGGGAAGTTTTCAAATTCATGATGCATCTCCCGGTGTTCTAGGTCGTTGTTTCATAGAGGTGGAAAATGGTTTCAAGGGAAACAGCTTTCCTGTGATCATAGCTGATGCTACAATCTGTAGCGAATTGAATCTCATTGAGTCTGAGTTTGATGGGGAGACAAAGGTATGCAGTGCAATTTCAGAAGATGAAAATCATGATTATGGGCGGCCCAGGTCAAGGGAGGAAGTCCTTCACTTTCTGAACGAGCTAGGATGGCTCTTCCAAAGGAAAAAGATCTCTTCCATGTTTCAAGGGTCCGGCTACTCTCTTAGCCGTTTCAAATTTTTACTCACATTCACTGTTGAGAGAGACTGTTGTACTTTGGTGAAAACACTTCTAGACATATTGGTAAATTTCGATGGGAATGAGCTATCAAGAGAGTCATTGGGGATGCTGTCAGATGTCCAGCTGTTAAACCGGGCTGTAAAAAGGAGGTGCAGGAAGATGATTGACTTGCTTATTAATTATTCTGTGATTAGCAGTGACAAGAGATACATTTTTCCTCCAAATCTTGCTGGACCTGGTGGCTTGACACCTCTTCATTTGGCTGCTTCTTTGTCAAATTCGGAGGATATGATTGATGCTTTGACGAATGATCCACAGGAGATCGGATTGAACTGCTGGCATTCCCTTTTGGATGGTAATGGGCAGTCTCCATATGCTTATGCTATGATGAGGAATAATTACTCTTACAACAATCTGGTGGTACGCAAACTTACTGACAGAAGAAATAGTCAGGTTACCTTAACAATTGGAAATGAGATAGACCAAACCCATATGGCGATGGAGCTGGAGCGTAGGACAAGTATCCAATTCAGACAAGGTAGCAGATCATGTGCCAAATGCGCTGTTGCAGCAACAAAATACACTAGGAGGGTTCCTGGTGCTCAAGGCTTGCTTCAGCGTCCATTCATTCATTCTATGCTTGCCATAGCTGCTGTTTGTGTTTGTGTCTGCTTGTTCTTGAGAGGTTCCCCAGACATTGGCTCAGTTGCTCCTTTCAAGTGGGAGAATTTGGATTTTGGCACAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009605 GO:0009607 GO:0009617 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0097159 GO:0098542 GO:0140110 GO:1901363 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SBP

Protein Analysis

890

Amino Acids

98.49

Weight (kDa)

8.35

Isoelectric Point (pI)

54.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SBP	PF03110	15 - 42	1.5e-08	SBP domain
Ig_SPL7	PF26102	472 - 576	6.2e-35	SPL7-like, immunoglobulin-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008543)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20980 AT1G76580 AT1G76580 AT1G76580
fragaria_vesca	FvH4_5g26510 FvH4_5g26510 FvH4_5g26510 FvH4_5g26510
malus_domestica	MD00G1031600.v1.1 MD06G1001500.v1.1
prunus_persica	Prupe.5G002300_v2.0.a1
pyrus_communis	pycom06g00160 pycom16g26290
rosa_chinensis	RchiOBHm_Chr7g0217411
rosa_laevigata	RLG00000002479
rosa_multiflora	Rmu_sc0000145.1_g000013
rosa_roxburghii	Rroxscaffold_3G00242100
rosa_rugosa	Rorug07G0169000
rosa_samantha	Rh7AG308600 Rh7BG299300 Rh7CG328000 Rh7DG307900
rosa_wichuraiana	Rw7G026170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	30, 33
AccB1I	GGYRCC	1 cut(s)	1508
AccB7I	CCANNNNNTGG	1 cut(s)	2621
AccI	GTMKAC	2 cut(s)	336, 1155
AciI	CCGC	5 cut(s)	53, 101, 1144, 1458, 1804
AclWI	GGATC	5 cut(s)	1064, 1086, 1112, 1125, 2228
AcuI	CTGAAG	4 cut(s)	281, 369, 762, 2522
AfaI	GTAC	5 cut(s)	276, 640, 1084, 1957, 2346
AfiI	CCNNNNNNNGG	7 cut(s)	136, 170, 362, 977, 1019, 1815, 2621
AflIII	ACRYGT	1 cut(s)	1282
AhlI	ACTAGT	1 cut(s)	185
AjuI	GAANNNNNNNTTGG	4 cut(s)	358, 390, 739, 771
Alw21I	GWGCWC	1 cut(s)	2527
Alw26I	GTCTC	7 cut(s)	88, 657, 680, 813, 1748, 1941, 2295
AlwI	GGATC	5 cut(s)	1064, 1086, 1112, 1125, 2228
AlwNI	CAGNNNCTG	2 cut(s)	869, 1313
Ama87I	CYCGRG	1 cut(s)	690
AoxI	GGCC	4 cut(s)	596, 968, 1202, 1805
ApeKI	GCWGC	9 cut(s)	218, 289, 344, 479, 572, 1247, 2186, 2492, 2573
ArsI	GACNNNNNNTTYG	2 cut(s)	508, 540
AseI	ATTAAT	1 cut(s)	2100
Asp700I	GAANNNNTTC	1 cut(s)	1827
AspLEI	GCGC	1 cut(s)	2486
AspS9I	GGNCC	7 cut(s)	578, 968, 1216, 1276, 1806, 1893, 2156
AsuC2I	CCSGG	2 cut(s)	1629, 2057
AsuHPI	GGTGA	6 cut(s)	41, 717, 813, 1041, 1410, 1975
AvaI	CYCGRG	1 cut(s)	690
AvaII	GGWCC	5 cut(s)	578, 1216, 1276, 1893, 2156
AxyI	CCTNAGG	3 cut(s)	135, 729, 1074
BamHI	GGATCC	1 cut(s)	1117
BanI	GGYRCC	1 cut(s)	1508
Bbv12I	GWGCWC	1 cut(s)	2527
BbvI	GCAGC	9 cut(s)	205, 301, 331, 491, 584, 1234, 2173, 2504, 2560
BccI	CCATC	8 cut(s)	164, 820, 1370, 1742, 1845, 1991, 2270, 2416
BceAI	ACGGC	2 cut(s)	280, 1896
BciVI	GTATCC	1 cut(s)	2456
BclI	TGATCA	2 cut(s)	1042, 1692
BcnI	CCSGG	2 cut(s)	1629, 2057
BcoDI	GTCTC	7 cut(s)	88, 657, 680, 813, 1748, 1941, 2295
BcuI	ACTAGT	1 cut(s)	185
BfmI	CTRYAG	2 cut(s)	657, 1714
BfuAI	ACCTGC	2 cut(s)	30, 33
BfuI	GTATCC	1 cut(s)	2456
BglII	AGATCT	2 cut(s)	403, 1872
BmcAI	AGTACT	1 cut(s)	640
Bme18I	GGWCC	5 cut(s)	578, 1216, 1276, 1893, 2156
BmeT110I	CYCGRG	1 cut(s)	690
BmgT120I	GGNCC	7 cut(s)	578, 968, 1216, 1276, 1806, 1893, 2156
BmiI	GGNNCC	6 cut(s)	1119, 1510, 1576, 1894, 2517, 2611
BmsI	GCATC	6 cut(s)	1267, 1609, 1631, 1693, 2019, 2209
BoxI	GACNNNNGTC	1 cut(s)	692
BplI	GAGNNNNNCTC	6 cut(s)	276, 308, 586, 618, 1415, 1447
BpmI	CTGGAG	2 cut(s)	186, 2450
BpuEI	CTTGAG	4 cut(s)	133, 588, 2511, 2623
BpuMI	CCSGG	2 cut(s)	1629, 2057
BsaAI	YACGTR	1 cut(s)	1527
BsaBI	GATNNNNATC	2 cut(s)	1116, 1788
BsaI	GGTCTC	1 cut(s)	813
BsaJI	CCNNGG	5 cut(s)	163, 444, 1133, 1251, 1808
Bsc4I	CCNNNNNNNGG	7 cut(s)	136, 170, 362, 977, 1019, 1815, 2621
Bse1I	ACTGG	5 cut(s)	282, 332, 649, 756, 1090
Bse21I	CCTNAGG	3 cut(s)	135, 729, 1074
Bse3DI	GCAATG	3 cut(s)	320, 1139, 1519
Bse8I	GATNNNNATC	2 cut(s)	1116, 1788
BseDI	CCNNGG	5 cut(s)	163, 444, 1133, 1251, 1808
BseGI	GGATG	5 cut(s)	145, 739, 1856, 2034, 2281
BseJI	GATNNNNATC	2 cut(s)	1116, 1788
BseLI	CCNNNNNNNGG	7 cut(s)	136, 170, 362, 977, 1019, 1815, 2621
BseMI	GCAATG	3 cut(s)	320, 1139, 1519
BseMII	CTCAG	5 cut(s)	126, 720, 1088, 1731, 2640
BseNI	ACTGG	5 cut(s)	282, 332, 649, 756, 1090
BseRI	GAGGAG	5 cut(s)	591, 712, 815, 982, 993
BseXI	GCAGC	9 cut(s)	205, 301, 331, 491, 584, 1234, 2173, 2504, 2560
BseYI	CCCAGC	2 cut(s)	129, 620
BsgI	GTGCAG	1 cut(s)	2095
BshFI	GGCC	4 cut(s)	598, 970, 1204, 1807
BshNI	GGYRCC	1 cut(s)	1508
BsiHKAI	GWGCWC	1 cut(s)	2527
BsiHKCI	CYCGRG	1 cut(s)	690
BsiSI	CCGG	3 cut(s)	1629, 1896, 2056
BslFI	GGGAC	2 cut(s)	1150, 1423
BslI	CCNNNNNNNGG	7 cut(s)	136, 170, 362, 977, 1019, 1815, 2621
BsmAI	GTCTC	7 cut(s)	88, 657, 680, 813, 1748, 1941, 2295
BsmFI	GGGAC	2 cut(s)	1150, 1423
BsmI	GAATGC	1 cut(s)	2263
BsnI	GGCC	4 cut(s)	598, 970, 1204, 1807
Bso31I	GGTCTC	1 cut(s)	813
BsoBI	CYCGRG	1 cut(s)	690
Bsp1286I	GDGCHC	1 cut(s)	2527
Bsp19I	CCATGG	1 cut(s)	444
BspACI	CCGC	5 cut(s)	53, 101, 1144, 1458, 1804
BspANI	GGCC	4 cut(s)	598, 970, 1204, 1807
BspCNI	CTCAG	5 cut(s)	127, 721, 1087, 1732, 2639
BspHI	TCATGA	2 cut(s)	1615, 1792
BspLI	GGNNCC	6 cut(s)	1119, 1510, 1576, 1894, 2517, 2611
BspMI	ACCTGC	2 cut(s)	30, 33
BspPI	GGATC	5 cut(s)	1064, 1086, 1112, 1125, 2228
BspQI	GCTCTTC	1 cut(s)	1862
BspT107I	GGYRCC	1 cut(s)	1508
BspTNI	GGTCTC	1 cut(s)	813
BsrDI	GCAATG	3 cut(s)	320, 1139, 1519
BsrI	ACTGG	5 cut(s)	282, 332, 649, 756, 1090
BssECI	CCNNGG	5 cut(s)	163, 444, 1133, 1251, 1808
BssNAI	GTATAC	1 cut(s)	1156
BssT1I	CCWWGG	1 cut(s)	444
Bst1107I	GTATAC	1 cut(s)	1156
Bst6I	CTCTTC	7 cut(s)	71, 587, 781, 848, 1862, 1882, 2181
BstBAI	YACGTR	1 cut(s)	1527
BstC8I	GCNNGC	5 cut(s)	1021, 1460, 2261, 2534, 2565
BstDEI	CTNAG	8 cut(s)	135, 305, 549, 729, 1074, 1740, 1907, 2626
BstDSI	CCRYGG	1 cut(s)	444
BstEII	GGTNACC	2 cut(s)	17, 2377
BstF5I	GGATG	5 cut(s)	145, 739, 1856, 2034, 2281
BstHHI	GCGC	1 cut(s)	2486
BstMAI	GTCTC	7 cut(s)	88, 657, 680, 813, 1748, 1941, 2295
BstMWI	GCNNNNNNNGC	7 cut(s)	112, 476, 595, 1852, 2483, 2492, 2573
BstNSI	RCATGY	1 cut(s)	561
BstPAI	GACNNNNGTC	1 cut(s)	692
BstPI	GGTNACC	2 cut(s)	17, 2377
BstSFI	CTRYAG	2 cut(s)	657, 1714
BstV1I	GCAGC	9 cut(s)	205, 301, 331, 491, 584, 1234, 2173, 2504, 2560
BstX2I	RGATCY	3 cut(s)	403, 1117, 1872
BstXI	CCANNNNNNTGG	1 cut(s)	575
BstYI	RGATCY	3 cut(s)	403, 1117, 1872
BstZ17I	GTATAC	1 cut(s)	1156
Bsu36I	CCTNAGG	3 cut(s)	135, 729, 1074
BsuI	GTATCC	1 cut(s)	2456
BsuRI	GGCC	4 cut(s)	598, 970, 1204, 1807
BtgI	CCRYGG	1 cut(s)	444
BtgZI	GCGATG	1 cut(s)	2435
BtsCI	GGATG	5 cut(s)	145, 739, 1856, 2034, 2281
BtsI	GCAGTG	2 cut(s)	1774, 2125
BtsIMutI	CAGTG	6 cut(s)	544, 839, 867, 1774, 1935, 2125
BveI	ACCTGC	2 cut(s)	30, 33
Cac8I	GCNNGC	5 cut(s)	1021, 1460, 2261, 2534, 2565
CaiI	CAGNNNCTG	2 cut(s)	869, 1313
CciI	TCATGA	2 cut(s)	1615, 1792
CfoI	GCGC	1 cut(s)	2486
Cfr13I	GGNCC	7 cut(s)	578, 968, 1216, 1276, 1806, 1893, 2156
CseI	GACGC	2 cut(s)	426, 2531
CsiI	ACCWGGT	2 cut(s)	1272, 2158
Csp6I	GTAC	5 cut(s)	275, 639, 1083, 1956, 2345
CspCI	CAANNNNNGTGG	2 cut(s)	169, 204
CviAII	CATG	8 cut(s)	445, 558, 928, 1571, 1616, 1793, 1882, 2472
CviQI	GTAC	5 cut(s)	275, 639, 1083, 1956, 2345
DdeI	CTNAG	8 cut(s)	135, 305, 549, 729, 1074, 1740, 1907, 2626
DraI	TTTAAA	2 cut(s)	372, 1102
Eam1104I	CTCTTC	7 cut(s)	71, 587, 781, 848, 1862, 1882, 2181
EarI	CTCTTC	7 cut(s)	71, 587, 781, 848, 1862, 1882, 2181
Eco130I	CCWWGG	1 cut(s)	444
Eco147I	AGGCCT	2 cut(s)	598, 1204
Eco31I	GGTCTC	1 cut(s)	813
Eco47I	GGWCC	5 cut(s)	578, 1216, 1276, 1893, 2156
Eco57I	CTGAAG	4 cut(s)	281, 369, 762, 2522
Eco81I	CCTNAGG	3 cut(s)	135, 729, 1074
Eco88I	CYCGRG	1 cut(s)	690
Eco91I	GGTNACC	2 cut(s)	17, 2377
EcoO65I	GGTNACC	2 cut(s)	17, 2377
EcoRI	GAATTC	1 cut(s)	1063
EcoT14I	CCWWGG	1 cut(s)	444
EcoT22I	ATGCAT	1 cut(s)	1624
ErhI	CCWWGG	1 cut(s)	444
FaeI	CATG	8 cut(s)	448, 561, 931, 1574, 1619, 1796, 1885, 2475
FalI	AAGNNNNNCTT	2 cut(s)	2520, 2552
FaqI	GGGAC	2 cut(s)	1150, 1423
FatI	CATG	8 cut(s)	444, 557, 927, 1570, 1615, 1792, 1881, 2471
FauI	CCCGC	3 cut(s)	60, 94, 1451
FauNDI	CATATG	2 cut(s)	2296, 2415
FbaI	TGATCA	2 cut(s)	1042, 1692
FblI	GTMKAC	2 cut(s)	336, 1155
FokI	GGATG	5 cut(s)	152, 746, 1863, 2041, 2288
GlaI	GCGC	1 cut(s)	2485
GsaI	CCCAGC	2 cut(s)	133, 624
GsuI	CTGGAG	2 cut(s)	186, 2450
HaeIII	GGCC	4 cut(s)	598, 970, 1204, 1807
HapII	CCGG	3 cut(s)	1629, 1896, 2056
HgaI	GACGC	2 cut(s)	426, 2531
HhaI	GCGC	1 cut(s)	2486
Hin1II	CATG	8 cut(s)	448, 561, 931, 1574, 1619, 1796, 1885, 2475
Hin6I	GCGC	1 cut(s)	2484
HinP1I	GCGC	1 cut(s)	2484
HincII	GTYRAC	3 cut(s)	208, 441, 555
HindII	GTYRAC	3 cut(s)	208, 441, 555
HindIII	AAGCTT	1 cut(s)	381
HpaI	GTTAAC	1 cut(s)	555
HpaII	CCGG	3 cut(s)	1629, 1896, 2056
HphI	GGTGA	6 cut(s)	41, 717, 813, 1041, 1410, 1975
Hpy166II	GTNNAC	9 cut(s)	208, 233, 337, 441, 555, 743, 913, 1156, 1418
Hpy8I	GTNNAC	9 cut(s)	208, 233, 337, 441, 555, 743, 913, 1156, 1418
Hpy99I	CGWCG	1 cut(s)	274
HpyAV	CCTTC	6 cut(s)	84, 114, 305, 495, 1326, 1838
HpyCH4IV	ACGT	2 cut(s)	1282, 1526
HpyF10VI	GCNNNNNNNGC	7 cut(s)	112, 476, 595, 1852, 2483, 2492, 2573
HpyF3I	CTNAG	8 cut(s)	135, 305, 549, 729, 1074, 1740, 1907, 2626
HpySE526I	ACGT	2 cut(s)	1282, 1526
Hsp92II	CATG	8 cut(s)	448, 561, 931, 1574, 1619, 1796, 1885, 2475
HspAI	GCGC	1 cut(s)	2484
Ksp22I	TGATCA	2 cut(s)	1042, 1692
KspAI	GTTAAC	1 cut(s)	555
LguI	GCTCTTC	1 cut(s)	1862
LmnI	GCTCC	8 cut(s)	297, 725, 980, 995, 1255, 2425, 2431, 2638
Lsp1109I	GCAGC	9 cut(s)	205, 301, 331, 491, 584, 1234, 2173, 2504, 2560
LweI	GCATC	6 cut(s)	1267, 1609, 1631, 1693, 2019, 2209
MabI	ACCWGGT	2 cut(s)	1272, 2158
MaeII	ACGT	2 cut(s)	1282, 1526
MaeIII	GTNAC	9 cut(s)	17, 142, 533, 819, 941, 1128, 1538, 2120, 2377
MfeI	CAATTG	1 cut(s)	2388
MflI	RGATCY	3 cut(s)	403, 1117, 1872
MhlI	GDGCHC	1 cut(s)	2527
MlyI	GAGTC	6 cut(s)	682, 702, 914, 1132, 1745, 2027
MmeI	TCCRAC	3 cut(s)	858, 1303, 1537
Mph1103I	ATGCAT	1 cut(s)	1624
MroXI	GAANNNNTTC	1 cut(s)	1827
MseI	TTAA	8 cut(s)	371, 554, 1101, 1295, 1427, 2051, 2100, 2384
MslI	CAYNNNNRTG	4 cut(s)	1374, 1529, 1655, 1797
MspA1I	CMGCKG	3 cut(s)	575, 620, 2047
MspI	CCGG	3 cut(s)	1629, 1896, 2056
MssI	GTTTAAAC	1 cut(s)	1102
MunI	CAATTG	1 cut(s)	2388
Mva1269I	GAATGC	1 cut(s)	2263
MwoI	GCNNNNNNNGC	7 cut(s)	112, 476, 595, 1852, 2483, 2492, 2573
NciI	CCSGG	2 cut(s)	1629, 2057
NcoI	CCATGG	1 cut(s)	444
NdeI	CATATG	2 cut(s)	2296, 2415
NlaIII	CATG	8 cut(s)	448, 561, 931, 1574, 1619, 1796, 1885, 2475
NlaIV	GGNNCC	6 cut(s)	1119, 1510, 1576, 1894, 2517, 2611
NmuCI	GTSAC	3 cut(s)	533, 819, 2120
NsiI	ATGCAT	1 cut(s)	1624
NspI	RCATGY	1 cut(s)	561
PaeR7I	CTCGAG	1 cut(s)	690
PagI	TCATGA	2 cut(s)	1615, 1792
PceI	AGGCCT	2 cut(s)	598, 1204
PciSI	GCTCTTC	1 cut(s)	1862
PctI	GAATGC	1 cut(s)	2263
PdmI	GAANNNNTTC	1 cut(s)	1827
PfeI	GAWTC	7 cut(s)	301, 358, 665, 1310, 1384, 1516, 1726
PflFI	GACNNNGTC	1 cut(s)	869
PflMI	CCANNNNNTGG	1 cut(s)	2621
PleI	GAGTC	6 cut(s)	682, 701, 914, 1131, 1744, 2026
PmeI	GTTTAAAC	1 cut(s)	1102
PpsI	GAGTC	6 cut(s)	682, 701, 914, 1131, 1744, 2026
Ppu21I	YACGTR	1 cut(s)	1527
PshAI	GACNNNNGTC	1 cut(s)	692
PshBI	ATTAAT	1 cut(s)	2100
PspEI	GGTNACC	2 cut(s)	17, 2377
PspFI	CCCAGC	2 cut(s)	129, 620
PspN4I	GGNNCC	6 cut(s)	1119, 1510, 1576, 1894, 2517, 2611
PspPI	GGNCC	7 cut(s)	578, 968, 1216, 1276, 1806, 1893, 2156
PspXI	VCTCGAGB	1 cut(s)	690
PstNI	CAGNNNCTG	2 cut(s)	869, 1313
PsuI	RGATCY	3 cut(s)	403, 1117, 1872
PsyI	GACNNNGTC	1 cut(s)	869
PvuII	CAGCTG	3 cut(s)	575, 620, 2047
RsaI	GTAC	5 cut(s)	276, 640, 1084, 1957, 2346
RsaNI	GTAC	5 cut(s)	275, 639, 1083, 1956, 2345
RseI	CAYNNNNRTG	4 cut(s)	1374, 1529, 1655, 1797
SapI	GCTCTTC	1 cut(s)	1862
SaqAI	TTAA	8 cut(s)	371, 554, 1101, 1295, 1427, 2051, 2100, 2384
Sau96I	GGNCC	7 cut(s)	578, 968, 1216, 1276, 1806, 1893, 2156
ScaI	AGTACT	1 cut(s)	640
SchI	GAGTC	6 cut(s)	682, 702, 914, 1132, 1745, 2027
SduI	GDGCHC	1 cut(s)	2527
SexAI	ACCWGGT	2 cut(s)	1272, 2158
SfaNI	GCATC	6 cut(s)	1267, 1609, 1631, 1693, 2019, 2209
SfcI	CTRYAG	2 cut(s)	657, 1714
Sfr274I	CTCGAG	1 cut(s)	690
SinI	GGWCC	5 cut(s)	578, 1216, 1276, 1893, 2156
SlaI	CTCGAG	1 cut(s)	690
SmiI	ATTTAAAT	1 cut(s)	372
SmiMI	CAYNNNNRTG	4 cut(s)	1374, 1529, 1655, 1797
SmlI	CTYRAG	5 cut(s)	148, 603, 690, 2526, 2602
SmoI	CTYRAG	5 cut(s)	148, 603, 690, 2526, 2602
SpeI	ACTAGT	1 cut(s)	185
SseBI	AGGCCT	2 cut(s)	598, 1204
SsiI	CCGC	5 cut(s)	53, 101, 1144, 1458, 1804
StuI	AGGCCT	2 cut(s)	598, 1204
StyI	CCWWGG	1 cut(s)	444
SwaI	ATTTAAAT	1 cut(s)	372
TaiI	ACGT	2 cut(s)	1285, 1529
TaqI	TCGA	3 cut(s)	691, 964, 1995
TatI	WGTACW	2 cut(s)	638, 1955
TauI	GCSGC	1 cut(s)	1807
TfiI	GAWTC	7 cut(s)	301, 358, 665, 1310, 1384, 1516, 1726
Tru1I	TTAA	8 cut(s)	371, 554, 1101, 1295, 1427, 2051, 2100, 2384
Tru9I	TTAA	8 cut(s)	371, 554, 1101, 1295, 1427, 2051, 2100, 2384
TscAI	CASTG	6 cut(s)	544, 846, 874, 1774, 1942, 2125
TseFI	GTSAC	3 cut(s)	533, 819, 2120
TseI	GCWGC	9 cut(s)	218, 289, 344, 479, 572, 1247, 2186, 2492, 2573
Tsp45I	GTSAC	3 cut(s)	533, 819, 2120
TspGWI	ACGGA	1 cut(s)	1167
TspRI	CASTG	6 cut(s)	544, 846, 874, 1774, 1942, 2125
Tth111I	GACNNNGTC	1 cut(s)	869
Van91I	CCANNNNNTGG	1 cut(s)	2621
VpaK11BI	GGWCC	5 cut(s)	578, 1216, 1276, 1893, 2156
VspI	ATTAAT	1 cut(s)	2100
XbaI	TCTAGA	1 cut(s)	1975
XceI	RCATGY	1 cut(s)	561
XhoI	CTCGAG	1 cut(s)	690
XmiI	GTMKAC	2 cut(s)	336, 1155
XmnI	GAANNNNTTC	1 cut(s)	1827
ZrmI	AGTACT	1 cut(s)	640
Zsp2I	ATGCAT	1 cut(s)	1624

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.