pycom06g02740

Acetylornithine deacetylase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0005490
Physical Location & Seq
Reverse (-)
3285918 .. 3288536
2619 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g02740.10

Sequence Viewer

Length: 1017 bp
ATGGACGTCGTCACTGCTAATCCCGAAGACTGGGAATTTGATCCATTCTCATTGAGCATCGAAGGAGATAAACTTTGTGGCCGTGGAACCACTGATTGCTTGGGTCATGTTGCACTTGTAACTGAGCTCATGAGAAGGCTGGCTGAGACAAAGCCAAAATTACAGTCAACTGTGGTTGCAGTCTTTATAGCAAATGAAGAGAATTCTTCCATTTCAGGAGTTGGTGTGGATGCACTCGTGAAGGATGGGCTACTCAGTAAGCTAAAGGATGGTCCTCTGTTTTGGATTGACACGGCAGATAAACAACCTTGCATCGGTACTGGTGGTATGATACCTTGGAAGCTTCATGTGACTGGGAAGCTTTTTCATAGTGGTTTACCACACAAGGCTATAAATCCTTTGGAGCTAGCTATGGAAGCACTGAAAGAGATCCAGTTGCGGTTCTATAGAGATTTTCCTCCACATCCCAAGGAAGAGGCCTACGGATTTGCAACACCGTCAACCATGAAGCCAACTCAATGGACTTATCCAGGTGGTGGAATAAATCAAATTCCGGCTGAATGCACAATTTCAGGAGATGTCAGGTTAACTCCCTTCTACAACGTTCAGGATGTTATGGGAAAGCTTCAAGAATACGTGGATGATATTAACGAAAACATAGGAAAGGTAGAGTCACGAGGTCCAGTTTCAAAGTATGTCCTACCAGATGAAAACTTAAGGGGAAGTCTTACATTAAGTTTCAACGAGGCCACGTCTGGAGTTGCTTGTGATCTGAACTCCCTTGGATTCCATGTATTGTGTAAAGCTACTGAAGAGATTGTTGGTCATGTAAAACCGTACTCAATTACTGGAAGTTTACCTCTCATTCGAGAATTACAGGATGAAGGATTCGATGTTCAAACTGCTGGCTATGGCTTGATGGCAACATACCATGCCAGGAACGAGTACTGCCTTTTTACGGACATGAGCCAAGGCTACCAGGTGTTCATCAGCGTGATCGCTCAACTAGAAGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

339

Amino Acids

37.18

Weight (kDa)

4.88

Isoelectric Point (pI)

36.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 9
AccB7I CCANNNNNTGG 1 cut(s) 536
AciI CCGC 1 cut(s) 439
AclI AACGTT 1 cut(s) 603
AclWI GGATC 2 cut(s) 35, 424
AcoI YGGCCR 1 cut(s) 79
AcsI RAATTY 3 cut(s) 35, 202, 549
AcuI CTGAAG 1 cut(s) 831
AcyI GRCGYC 1 cut(s) 6
AfaI GTAC 3 cut(s) 319, 839, 947
AfiI CCNNNNNNNGG 4 cut(s) 30, 314, 536, 958
AflII CTTAAG 1 cut(s) 715
AgsI TTSAA 4 cut(s) 629, 690, 742, 899
AjiI CACGTC 1 cut(s) 753
AjnI CCWGG 3 cut(s) 529, 935, 978
AjuI GAANNNNNNNTTGG 2 cut(s) 804, 836
AloI GAACNNNNNNTCC 2 cut(s) 879, 911
AluBI AGCT 8 cut(s) 127, 262, 343, 361, 406, 410, 625, 806
AluI AGCT 8 cut(s) 127, 262, 343, 361, 406, 410, 625, 806
Alw21I GWGCWC 1 cut(s) 129
Alw26I GTCTC 1 cut(s) 140
AlwI GGATC 2 cut(s) 35, 424
AoxI GGCC 3 cut(s) 79, 477, 747
ApoI RAATTY 3 cut(s) 35, 202, 549
ArsI GACNNNNNNTTYG 4 cut(s) 20, 52, 149, 181
AspS9I GGNCC 2 cut(s) 272, 680
AsuNHI GCTAGC 1 cut(s) 406
AvaII GGWCC 2 cut(s) 272, 680
BanII GRGCYC 1 cut(s) 129
BauI CACGAG 2 cut(s) 236, 675
BbsI GAAGAC 1 cut(s) 33
Bbv12I GWGCWC 1 cut(s) 129
BccI CCATC 3 cut(s) 239, 263, 913
BceAI ACGGC 2 cut(s) 66, 309
BciT130I CCWGG 3 cut(s) 531, 937, 980
BcoDI GTCTC 1 cut(s) 140
BfaI CTAG 2 cut(s) 407, 1007
BfmI CTRYAG 1 cut(s) 445
BfrI CTTAAG 1 cut(s) 715
BmcAI AGTACT 1 cut(s) 947
Bme1390I CCNGG 3 cut(s) 531, 937, 980
Bme18I GGWCC 2 cut(s) 272, 680
BmgBI CACGTC 1 cut(s) 753
BmgT120I GGNCC 2 cut(s) 272, 680
BmiI GGNNCC 1 cut(s) 88
BmrFI CCNGG 3 cut(s) 531, 937, 980
BmrI ACTGGG 2 cut(s) 40, 363
BmsI GCATC 3 cut(s) 66, 220, 321
BmtI GCTAGC 1 cut(s) 410
BmuI ACTGGG 2 cut(s) 40, 363
BpiI GAAGAC 1 cut(s) 33
BpmI CTGGAG 1 cut(s) 777
BsaAI YACGTR 1 cut(s) 637
BsaHI GRCGYC 1 cut(s) 6
BsaJI CCNNGG 5 cut(s) 82, 335, 468, 781, 970
BsaXI ACNNNNNCTCC 2 cut(s) 210, 240
Bsc4I CCNNNNNNNGG 4 cut(s) 30, 314, 536, 958
Bse1I ACTGG 6 cut(s) 35, 325, 358, 433, 683, 853
BseBI CCWGG 3 cut(s) 531, 937, 980
BseDI CCNNGG 5 cut(s) 82, 335, 468, 781, 970
BseGI GGATG 7 cut(s) 235, 250, 274, 463, 616, 646, 886
BseLI CCNNNNNNNGG 4 cut(s) 30, 314, 536, 958
BseMII CTCAG 3 cut(s) 114, 135, 268
BseNI ACTGG 6 cut(s) 35, 325, 358, 433, 683, 853
BshFI GGCC 3 cut(s) 81, 479, 749
BsiHKAI GWGCWC 1 cut(s) 129
BsiSI CCGG 1 cut(s) 554
BslI CCNNNNNNNGG 4 cut(s) 30, 314, 536, 958
BsmAI GTCTC 1 cut(s) 140
BsmI GAATGC 1 cut(s) 566
BsnI GGCC 3 cut(s) 81, 479, 749
Bsp1286I GDGCHC 1 cut(s) 129
Bsp143I GATC 4 cut(s) 40, 429, 769, 996
BspACI CCGC 1 cut(s) 439
BspANI GGCC 3 cut(s) 81, 479, 749
BspCNI CTCAG 3 cut(s) 115, 136, 267
BspHI TCATGA 1 cut(s) 129
BspLI GGNNCC 1 cut(s) 88
BspOI GCTAGC 1 cut(s) 410
BspPI GGATC 2 cut(s) 35, 424
BspTI CTTAAG 1 cut(s) 715
BsrI ACTGG 6 cut(s) 35, 325, 358, 433, 683, 853
BssECI CCNNGG 5 cut(s) 82, 335, 468, 781, 970
BssMI GATC 4 cut(s) 40, 429, 769, 996
BssNI GRCGYC 1 cut(s) 6
BssSI CACGAG 2 cut(s) 236, 675
BssT1I CCWWGG 4 cut(s) 335, 468, 781, 970
Bst2BI CACGAG 2 cut(s) 236, 675
Bst2UI CCWGG 3 cut(s) 531, 937, 980
Bst4CI ACNGT 4 cut(s) 165, 172, 498, 837
Bst6I CTCTTC 3 cut(s) 192, 468, 807
BstACI GRCGYC 1 cut(s) 6
BstAFI CTTAAG 1 cut(s) 715
BstBAI YACGTR 1 cut(s) 637
BstC8I GCNNGC 3 cut(s) 141, 408, 907
BstDEI CTNAG 3 cut(s) 123, 144, 254
BstDSI CCRYGG 1 cut(s) 82
BstF5I GGATG 7 cut(s) 235, 250, 274, 463, 616, 646, 886
BstKTI GATC 4 cut(s) 43, 432, 772, 999
BstMAI GTCTC 1 cut(s) 140
BstMBI GATC 4 cut(s) 40, 429, 769, 996
BstMWI GCNNNNNNNGC 1 cut(s) 416
BstNI CCWGG 3 cut(s) 531, 937, 980
BstSCI CCNGG 3 cut(s) 529, 935, 978
BstSFI CTRYAG 1 cut(s) 445
BstV2I GAAGAC 1 cut(s) 33
BstX2I RGATCY 1 cut(s) 429
BstXI CCANNNNNNTGG 1 cut(s) 519
BstYI RGATCY 1 cut(s) 429
BsuRI GGCC 3 cut(s) 81, 479, 749
BtgI CCRYGG 1 cut(s) 82
BtrI CACGTC 1 cut(s) 753
BtsCI GGATG 7 cut(s) 235, 250, 274, 463, 616, 646, 886
BtsI GCAGTG 1 cut(s) 12
BtsIMutI CAGTG 3 cut(s) 12, 90, 419
Cac8I GCNNGC 3 cut(s) 141, 408, 907
CciI TCATGA 1 cut(s) 129
Cfr13I GGNCC 2 cut(s) 272, 680
CsiI ACCWGGT 1 cut(s) 978
Csp6I GTAC 3 cut(s) 318, 838, 946
CviAII CATG 8 cut(s) 107, 130, 347, 505, 791, 827, 932, 964
CviQI GTAC 3 cut(s) 318, 838, 946
DdeI CTNAG 3 cut(s) 123, 144, 254
DpnI GATC 4 cut(s) 42, 431, 771, 998
DpnII GATC 4 cut(s) 40, 429, 769, 996
EaeI YGGCCR 1 cut(s) 79
Eam1104I CTCTTC 3 cut(s) 192, 468, 807
EarI CTCTTC 3 cut(s) 192, 468, 807
Ecl136II GAGCTC 1 cut(s) 127
Eco130I CCWWGG 4 cut(s) 335, 468, 781, 970
Eco147I AGGCCT 1 cut(s) 479
Eco24I GRGCYC 1 cut(s) 129
Eco47I GGWCC 2 cut(s) 272, 680
Eco53kI GAGCTC 1 cut(s) 127
Eco57I CTGAAG 1 cut(s) 831
EcoICRI GAGCTC 1 cut(s) 127
EcoRI GAATTC 1 cut(s) 202
EcoRII CCWGG 3 cut(s) 529, 935, 978
EcoT14I CCWWGG 4 cut(s) 335, 468, 781, 970
EcoT38I GRGCYC 1 cut(s) 129
ErhI CCWWGG 4 cut(s) 335, 468, 781, 970
FaeI CATG 8 cut(s) 110, 133, 350, 508, 794, 830, 935, 967
FatI CATG 8 cut(s) 106, 129, 346, 504, 790, 826, 931, 963
FokI GGATG 7 cut(s) 242, 257, 281, 450, 623, 653, 893
FriOI GRGCYC 1 cut(s) 129
FspBI CTAG 2 cut(s) 407, 1007
GsuI CTGGAG 1 cut(s) 777
HaeIII GGCC 3 cut(s) 81, 479, 749
HapII CCGG 1 cut(s) 554
Hin1I GRCGYC 1 cut(s) 6
Hin1II CATG 8 cut(s) 110, 133, 350, 508, 794, 830, 935, 967
HincII GTYRAC 3 cut(s) 168, 501, 588
HindII GTYRAC 3 cut(s) 168, 501, 588
HindIII AAGCTT 3 cut(s) 341, 359, 623
HinfI GANTC 3 cut(s) 671, 786, 888
HpaI GTTAAC 1 cut(s) 588
HpaII CCGG 1 cut(s) 554
Hpy166II GTNNAC 5 cut(s) 168, 377, 501, 588, 857
Hpy188I TCNGA 1 cut(s) 774
Hpy8I GTNNAC 5 cut(s) 168, 377, 501, 588, 857
Hpy99I CGWCG 1 cut(s) 11
HpyAV CCTTC 5 cut(s) 56, 129, 235, 604, 878
HpyCH4III ACNGT 4 cut(s) 165, 172, 498, 837
HpyCH4IV ACGT 4 cut(s) 6, 603, 636, 752
HpyCH4V TGCA 6 cut(s) 113, 179, 233, 312, 491, 564
HpyF10VI GCNNNNNNNGC 1 cut(s) 416
HpyF3I CTNAG 3 cut(s) 123, 144, 254
HpySE526I ACGT 4 cut(s) 6, 603, 636, 752
Hsp92I GRCGYC 1 cut(s) 6
Hsp92II CATG 8 cut(s) 110, 133, 350, 508, 794, 830, 935, 967
KspAI GTTAAC 1 cut(s) 588
Kzo9I GATC 4 cut(s) 40, 429, 769, 996
LmnI GCTCC 1 cut(s) 403
LweI GCATC 3 cut(s) 66, 220, 321
MabI ACCWGGT 1 cut(s) 978
MaeI CTAG 2 cut(s) 407, 1007
MaeII ACGT 4 cut(s) 6, 603, 636, 752
MaeIII GTNAC 4 cut(s) 10, 118, 349, 672
MalI GATC 4 cut(s) 42, 431, 771, 998
MboI GATC 4 cut(s) 40, 429, 769, 996
MboII GAAGA 5 cut(s) 38, 198, 209, 485, 824
MflI RGATCY 1 cut(s) 429
MhlI GDGCHC 1 cut(s) 129
MluCI AATT 7 cut(s) 35, 158, 202, 549, 567, 843, 872
MlyI GAGTC 1 cut(s) 680
MnlI CCTC 6 cut(s) 285, 468, 469, 671, 739, 870
MseI TTAA 4 cut(s) 587, 648, 716, 734
MslI CAYNNNNRTG 1 cut(s) 992
MspCI CTTAAG 1 cut(s) 715
MspI CCGG 1 cut(s) 554
MspR9I CCNGG 3 cut(s) 531, 937, 980
Mva1269I GAATGC 1 cut(s) 566
MvaI CCWGG 3 cut(s) 531, 937, 980
MwoI GCNNNNNNNGC 1 cut(s) 416
NdeII GATC 4 cut(s) 40, 429, 769, 996
NheI GCTAGC 1 cut(s) 406
NlaIII CATG 8 cut(s) 110, 133, 350, 508, 794, 830, 935, 967
NlaIV GGNNCC 1 cut(s) 88
NmuCI GTSAC 3 cut(s) 10, 349, 672
PagI TCATGA 1 cut(s) 129
PceI AGGCCT 1 cut(s) 479
PctI GAATGC 1 cut(s) 566
PfeI GAWTC 2 cut(s) 786, 888
PflFI GACNNNGTC 1 cut(s) 8
PflMI CCANNNNNTGG 1 cut(s) 536
PleI GAGTC 1 cut(s) 679
PpsI GAGTC 1 cut(s) 679
Ppu21I YACGTR 1 cut(s) 637
Psp124BI GAGCTC 1 cut(s) 129
Psp1406I AACGTT 1 cut(s) 603
Psp6I CCWGG 3 cut(s) 529, 935, 978
PspGI CCWGG 3 cut(s) 529, 935, 978
PspN4I GGNNCC 1 cut(s) 88
PspPI GGNCC 2 cut(s) 272, 680
PsuI RGATCY 1 cut(s) 429
PsyI GACNNNGTC 1 cut(s) 8
RsaI GTAC 3 cut(s) 319, 839, 947
RsaNI GTAC 3 cut(s) 318, 838, 946
RseI CAYNNNNRTG 1 cut(s) 992
SacI GAGCTC 1 cut(s) 129
SaqAI TTAA 4 cut(s) 587, 648, 716, 734
Sau3AI GATC 4 cut(s) 40, 429, 769, 996
Sau96I GGNCC 2 cut(s) 272, 680
ScaI AGTACT 1 cut(s) 947
SchI GAGTC 1 cut(s) 680
ScrFI CCNGG 3 cut(s) 531, 937, 980
SduI GDGCHC 1 cut(s) 129
SexAI ACCWGGT 1 cut(s) 978
SfaNI GCATC 3 cut(s) 66, 220, 321
SfcI CTRYAG 1 cut(s) 445
SinI GGWCC 2 cut(s) 272, 680
SmiMI CAYNNNNRTG 1 cut(s) 992
SmlI CTYRAG 1 cut(s) 715
SmoI CTYRAG 1 cut(s) 715
Sse9I AATT 7 cut(s) 35, 158, 202, 549, 567, 843, 872
SseBI AGGCCT 1 cut(s) 479
SsiI CCGC 1 cut(s) 439
SspMI CTAG 2 cut(s) 407, 1007
SstI GAGCTC 1 cut(s) 129
StuI AGGCCT 1 cut(s) 479
StyD4I CCNGG 3 cut(s) 529, 935, 978
StyI CCWWGG 4 cut(s) 335, 468, 781, 970
TaaI ACNGT 4 cut(s) 165, 172, 498, 837
TaiI ACGT 4 cut(s) 9, 606, 639, 755
TaqI TCGA 3 cut(s) 60, 868, 891
TasI AATT 7 cut(s) 35, 158, 202, 549, 567, 843, 872
TatI WGTACW 1 cut(s) 945
TfiI GAWTC 2 cut(s) 786, 888
Tru1I TTAA 4 cut(s) 587, 648, 716, 734
Tru9I TTAA 4 cut(s) 587, 648, 716, 734
TscAI CASTG 3 cut(s) 19, 97, 426
TseFI GTSAC 3 cut(s) 10, 349, 672
Tsp45I GTSAC 3 cut(s) 10, 349, 672
TspDTI ATGAA 7 cut(s) 210, 335, 356, 521, 723, 897, 976
TspGWI ACGGA 2 cut(s) 498, 974
TspRI CASTG 3 cut(s) 19, 97, 426
Tth111I GACNNNGTC 1 cut(s) 8
Van91I CCANNNNNTGG 1 cut(s) 536
Vha464I CTTAAG 1 cut(s) 715
VpaK11BI GGWCC 2 cut(s) 272, 680
XapI RAATTY 3 cut(s) 35, 202, 549
XcmI CCANNNNNNNNNTGG 1 cut(s) 97
XspI CTAG 2 cut(s) 407, 1007
ZraI GACGTC 1 cut(s) 7
ZrmI AGTACT 1 cut(s) 947
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.