Rh7AG246800

Acetylornithine deacetylase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0005490
Physical Location & Seq
Reverse (-)
24336459 .. 24341241
4783 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG246800.1

Sequence Viewer

Length: 1077 bp
ATGGCTTCCTCCACCACCGACGACCTCAAGAAAACCCTCGGCGACCTCGACAAGGACTCCTTCATATCCCTCCTCTCCAAGCTCATCGGCGAGGCCAAGTTCGTCCAGAACAACCCCCCTGACCTCATTCCTCAGGAGGACCGAGTCGTCAAGCACGTGCTCGCCTCTCTCTTGCCCCTTAGCACCACCACCGGCGGCGGACCCCTCCTCATCAATCACGTGACTTACCACCCCGGCAGGGGCAACGTGATTGTGGAGTACCCGGGGACTGTGCCCGGGAAAGTGCTGTCCTTTGTGGGGTGTCACATGGACGTCGTCACTGCCAATCCTGATGACTGGGAATTTGATCCCTTCTCCTTGAGCATTGATGGGGACAAACTGCGTGGCCGAGGCACCACTGATTGCTTAGGGCATGTTGCACTTGTAACTGAGCTCATGAGAAGGCTGGCGCAGACAAAACCAAAATTGAAGTCAACTGTGGCAGTTGTCTTGATAGCAAATGAAGAGAATTCTTCCATTGCAGGAGTTGGTGTGGATGCACTTGTGAAGGATGGGCTACTCAACAAGCTAAAGGATGGTCCTTTGTTTTGGATAGATACAGCAGATAAACAACCATGCATTGGTACTGGTGGATCGATACCTTGGAAGCTTCATGTGACTGGGAAGCTTTTTCACAGTGGTTTACCGCACAAGGCTATAAACCCTTTGGAGCTAGCTATGGAAGCACTGAAGGAGATCCAATCTCGGTTCTATAGAGATTTTCCTCCCCATGATAAGGAAAAGGTGTATGGATATGCAACACCATCAACCATGAAACCAACTCAATGGAAATATCCAGGTGGTGGAATAAATCAAATTCCTTTTGAGTGTACAATTTCAGGAGATGTCAGGTTAACTCCATTCTACAACGTTACGGATGTGATGAAAAAGCTTCAAGAATATGTGGATGACATTAATGAAAACATAACAAAGCTAGACTCACGAGGTCCAGTTTCAAAGTATGTCCTGCCTGATGAAAACTTACGGGGAAGGTGCTCTCTCTCTCTCTCTCTCTCTCTCTCGGATGATATTTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

358

Amino Acids

39.22

Weight (kDa)

6.0

Isoelectric Point (pI)

26.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M28 PF04389 82 - 171 9.2e-06 Peptidase family M28
Peptidase_M20 PF01546 99 - 190 9.9e-16 Peptidase family M20/M25/M40
M20_dimer PF07687 207 - 321 1.7e-14 Peptidase dimerisation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 146
AatII GACGTC 1 cut(s) 315
AccB1I GGYRCC 1 cut(s) 392
AccB7I CCANNNNNTGG 2 cut(s) 620, 842
AciI CCGC 3 cut(s) 195, 198, 686
AclI AACGTT 1 cut(s) 909
AclWI GGATC 3 cut(s) 341, 640, 730
AcoI YGGCCR 1 cut(s) 385
AcsI RAATTY 3 cut(s) 341, 508, 855
AcuI CTGAAG 1 cut(s) 749
AcvI CACGTG 2 cut(s) 157, 220
AcyI GRCGYC 1 cut(s) 312
AfaI GTAC 3 cut(s) 260, 625, 871
AfiI CCNNNNNNNGG 7 cut(s) 52, 238, 239, 297, 620, 775, 842
AgsI TTSAA 3 cut(s) 469, 935, 996
AjnI CCWGG 1 cut(s) 835
AluBI AGCT 9 cut(s) 82, 433, 568, 649, 667, 712, 716, 931, 973
AluI AGCT 9 cut(s) 82, 433, 568, 649, 667, 712, 716, 931, 973
Alw21I GWGCWC 3 cut(s) 162, 435, 1037
AlwI GGATC 3 cut(s) 341, 640, 730
Ama87I CYCGRG 2 cut(s) 262, 275
AoxI GGCC 2 cut(s) 93, 385
ApoI RAATTY 3 cut(s) 341, 508, 855
ArsI GACNNNNNNTTYG 4 cut(s) 326, 358, 455, 487
AseI ATTAAT 1 cut(s) 954
AspLEI GCGC 1 cut(s) 451
AspS9I GGNCC 4 cut(s) 139, 200, 578, 986
AsuC2I CCSGG 5 cut(s) 234, 263, 264, 276, 277
AsuNHI GCTAGC 1 cut(s) 712
AvaI CYCGRG 2 cut(s) 262, 275
AvaII GGWCC 4 cut(s) 139, 200, 578, 986
AxyI CCTNAGG 1 cut(s) 132
BaeGI GKGCMC 1 cut(s) 276
BanI GGYRCC 1 cut(s) 392
BanII GRGCYC 1 cut(s) 435
BauI CACGAG 1 cut(s) 981
BbrPI CACGTG 2 cut(s) 157, 220
Bbv12I GWGCWC 3 cut(s) 162, 435, 1037
BccI CCATC 4 cut(s) 362, 545, 569, 811
BciT130I CCWGG 1 cut(s) 837
BcnI CCSGG 5 cut(s) 234, 263, 264, 276, 277
BfaI CTAG 2 cut(s) 713, 974
BfmI CTRYAG 1 cut(s) 751
BisI GCNGC 1 cut(s) 196
BlsI GCNGC 1 cut(s) 197
Bme1390I CCNGG 6 cut(s) 234, 263, 264, 276, 277, 837
Bme18I GGWCC 4 cut(s) 139, 200, 578, 986
BmeT110I CYCGRG 2 cut(s) 262, 275
BmgT120I GGNCC 4 cut(s) 139, 200, 578, 986
BmiI GGNNCC 2 cut(s) 202, 394
BmrFI CCNGG 6 cut(s) 234, 263, 264, 276, 277, 837
BmrI ACTGGG 2 cut(s) 346, 669
BmsI GCATC 1 cut(s) 526
BmtI GCTAGC 1 cut(s) 716
BmuI ACTGGG 2 cut(s) 346, 669
Bpu10I CCTNAGC 2 cut(s) 179, 406
BpuEI CTTGAG 2 cut(s) 11, 379
BpuMI CCSGG 5 cut(s) 234, 263, 264, 276, 277
Bsa29I ATCGAT 1 cut(s) 635
BsaAI YACGTR 2 cut(s) 157, 220
BsaHI GRCGYC 1 cut(s) 312
BsaJI CCNNGG 7 cut(s) 37, 232, 262, 263, 275, 388, 641
BsaXI ACNNNNNCTCC 4 cut(s) 41, 71, 516, 546
Bsc4I CCNNNNNNNGG 7 cut(s) 52, 238, 239, 297, 620, 775, 842
Bse118I RCCGGY 1 cut(s) 191
Bse1I ACTGG 4 cut(s) 341, 631, 664, 989
Bse21I CCTNAGG 1 cut(s) 132
Bse3DI GCAATG 1 cut(s) 516
BseBI CCWGG 1 cut(s) 837
BseCI ATCGAT 1 cut(s) 635
BseDI CCNNGG 7 cut(s) 37, 232, 262, 263, 275, 388, 641
BseGI GGATG 6 cut(s) 541, 556, 580, 922, 952, 1069
BseLI CCNNNNNNNGG 7 cut(s) 52, 238, 239, 297, 620, 775, 842
BseMI GCAATG 1 cut(s) 516
BseMII CTCAG 2 cut(s) 146, 420
BseNI ACTGG 4 cut(s) 341, 631, 664, 989
BseRI GAGGAG 2 cut(s) 62, 197
BseSI GKGCMC 1 cut(s) 276
BshFI GGCC 2 cut(s) 95, 387
BshNI GGYRCC 1 cut(s) 392
BshVI ATCGAT 1 cut(s) 635
BsiHKAI GWGCWC 3 cut(s) 162, 435, 1037
BsiHKCI CYCGRG 2 cut(s) 262, 275
BsiSI CCGG 4 cut(s) 192, 234, 263, 276
BslFI GGGAC 2 cut(s) 280, 386
BslI CCNNNNNNNGG 7 cut(s) 52, 238, 239, 297, 620, 775, 842
BsmFI GGGAC 2 cut(s) 280, 386
BsnI GGCC 2 cut(s) 95, 387
BsoBI CYCGRG 2 cut(s) 262, 275
Bsp1286I GDGCHC 4 cut(s) 162, 276, 435, 1037
Bsp1407I TGTACA 1 cut(s) 869
Bsp143I GATC 3 cut(s) 346, 632, 735
BspACI CCGC 3 cut(s) 195, 198, 686
BspANI GGCC 2 cut(s) 95, 387
BspCNI CTCAG 2 cut(s) 145, 421
BspDI ATCGAT 1 cut(s) 635
BspHI TCATGA 1 cut(s) 435
BspLI GGNNCC 2 cut(s) 202, 394
BspOI GCTAGC 1 cut(s) 716
BspPI GGATC 3 cut(s) 341, 640, 730
BspT107I GGYRCC 1 cut(s) 392
BsrDI GCAATG 1 cut(s) 516
BsrFI RCCGGY 1 cut(s) 191
BsrGI TGTACA 1 cut(s) 869
BsrI ACTGG 4 cut(s) 341, 631, 664, 989
BssAI RCCGGY 1 cut(s) 191
BssECI CCNNGG 7 cut(s) 37, 232, 262, 263, 275, 388, 641
BssMI GATC 3 cut(s) 346, 632, 735
BssNI GRCGYC 1 cut(s) 312
BssSI CACGAG 1 cut(s) 981
BssT1I CCWWGG 1 cut(s) 641
Bst2BI CACGAG 1 cut(s) 981
Bst2UI CCWGG 1 cut(s) 837
Bst4CI ACNGT 3 cut(s) 271, 478, 677
Bst6I CTCTTC 1 cut(s) 498
BstACI GRCGYC 1 cut(s) 312
BstAUI TGTACA 1 cut(s) 869
BstBAI YACGTR 2 cut(s) 157, 220
BstC8I GCNNGC 3 cut(s) 162, 447, 714
BstDEI CTNAG 4 cut(s) 132, 179, 406, 429
BstENI CCTNNNNNAGG 1 cut(s) 50
BstF5I GGATG 6 cut(s) 541, 556, 580, 922, 952, 1069
BstHHI GCGC 1 cut(s) 451
BstKTI GATC 3 cut(s) 349, 635, 738
BstMBI GATC 3 cut(s) 346, 632, 735
BstMWI GCNNNNNNNGC 1 cut(s) 722
BstNI CCWGG 1 cut(s) 837
BstNSI RCATGY 1 cut(s) 416
BstSCI CCNGG 6 cut(s) 232, 261, 262, 274, 275, 835
BstSFI CTRYAG 1 cut(s) 751
BstSLI GKGCMC 1 cut(s) 276
BstX2I RGATCY 1 cut(s) 735
BstXI CCANNNNNNTGG 1 cut(s) 825
BstYI RGATCY 1 cut(s) 735
Bsu15I ATCGAT 1 cut(s) 635
Bsu36I CCTNAGG 1 cut(s) 132
BsuRI GGCC 2 cut(s) 95, 387
BsuTUI ATCGAT 1 cut(s) 635
BtsCI GGATG 6 cut(s) 541, 556, 580, 922, 952, 1069
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 4 cut(s) 318, 396, 682, 725
Cac8I GCNNGC 3 cut(s) 162, 447, 714
CciI TCATGA 1 cut(s) 435
CfoI GCGC 1 cut(s) 451
Cfr10I RCCGGY 1 cut(s) 191
Cfr13I GGNCC 4 cut(s) 139, 200, 578, 986
Cfr9I CCCGGG 2 cut(s) 262, 275
ClaI ATCGAT 1 cut(s) 635
Csp6I GTAC 3 cut(s) 259, 624, 870
CspCI CAANNNNNGTGG 2 cut(s) 364, 399
CviAII CATG 7 cut(s) 307, 413, 436, 615, 653, 770, 811
CviQI GTAC 3 cut(s) 259, 624, 870
DdeI CTNAG 4 cut(s) 132, 179, 406, 429
DpnI GATC 3 cut(s) 348, 634, 737
DpnII GATC 3 cut(s) 346, 632, 735
DrdI GACNNNNNNGTC 1 cut(s) 146
DseDI GACNNNNNNGTC 1 cut(s) 146
EaeI YGGCCR 1 cut(s) 385
Eam1104I CTCTTC 1 cut(s) 498
EarI CTCTTC 1 cut(s) 498
EciI GGCGGA 1 cut(s) 213
Ecl136II GAGCTC 1 cut(s) 433
Eco130I CCWWGG 1 cut(s) 641
Eco24I GRGCYC 1 cut(s) 435
Eco47I GGWCC 4 cut(s) 139, 200, 578, 986
Eco53kI GAGCTC 1 cut(s) 433
Eco57I CTGAAG 1 cut(s) 749
Eco72I CACGTG 2 cut(s) 157, 220
Eco81I CCTNAGG 1 cut(s) 132
Eco88I CYCGRG 2 cut(s) 262, 275
EcoICRI GAGCTC 1 cut(s) 433
EcoNI CCTNNNNNAGG 1 cut(s) 50
EcoRI GAATTC 1 cut(s) 508
EcoRII CCWGG 1 cut(s) 835
EcoT14I CCWWGG 1 cut(s) 641
EcoT22I ATGCAT 1 cut(s) 620
EcoT38I GRGCYC 1 cut(s) 435
ErhI CCWWGG 1 cut(s) 641
FaeI CATG 7 cut(s) 310, 416, 439, 618, 656, 773, 814
FalI AAGNNNNNCTT 2 cut(s) 44, 76
FaqI GGGAC 2 cut(s) 280, 386
FatI CATG 7 cut(s) 306, 412, 435, 614, 652, 769, 810
Fnu4HI GCNGC 1 cut(s) 196
FokI GGATG 5 cut(s) 548, 563, 587, 929, 959
FriOI GRGCYC 1 cut(s) 435
Fsp4HI GCNGC 1 cut(s) 196
FspBI CTAG 2 cut(s) 713, 974
GlaI GCGC 1 cut(s) 450
GluI GCNGC 1 cut(s) 196
HaeIII GGCC 2 cut(s) 95, 387
HapII CCGG 4 cut(s) 192, 234, 263, 276
HhaI GCGC 1 cut(s) 451
Hin1I GRCGYC 1 cut(s) 312
Hin1II CATG 7 cut(s) 310, 416, 439, 618, 656, 773, 814
Hin6I GCGC 1 cut(s) 449
HinP1I GCGC 1 cut(s) 449
HincII GTYRAC 2 cut(s) 474, 894
HindII GTYRAC 2 cut(s) 474, 894
HindIII AAGCTT 3 cut(s) 647, 665, 929
HinfI GANTC 3 cut(s) 56, 144, 977
HpaI GTTAAC 1 cut(s) 894
HpaII CCGG 4 cut(s) 192, 234, 263, 276
Hpy166II GTNNAC 4 cut(s) 474, 683, 870, 894
Hpy188I TCNGA 1 cut(s) 1063
Hpy188III TCNNGA 9 cut(s) 28, 106, 134, 329, 436, 490, 879, 935, 981
Hpy8I GTNNAC 4 cut(s) 474, 683, 870, 894
Hpy99I CGWCG 2 cut(s) 23, 317
HpyAV CCTTC 6 cut(s) 70, 361, 435, 541, 724, 1023
HpyCH4III ACNGT 3 cut(s) 271, 478, 677
HpyCH4IV ACGT 5 cut(s) 156, 219, 246, 312, 909
HpyCH4V TGCA 5 cut(s) 419, 521, 539, 618, 797
HpyF10VI GCNNNNNNNGC 1 cut(s) 722
HpyF3I CTNAG 4 cut(s) 132, 179, 406, 429
HpySE526I ACGT 5 cut(s) 156, 219, 246, 312, 909
Hsp92I GRCGYC 1 cut(s) 312
Hsp92II CATG 7 cut(s) 310, 416, 439, 618, 656, 773, 814
HspAI GCGC 1 cut(s) 449
KspAI GTTAAC 1 cut(s) 894
Kzo9I GATC 3 cut(s) 346, 632, 735
LmnI GCTCC 1 cut(s) 709
LweI GCATC 1 cut(s) 526
MaeI CTAG 2 cut(s) 713, 974
MaeII ACGT 5 cut(s) 156, 219, 246, 312, 909
MaeIII GTNAC 6 cut(s) 220, 302, 316, 424, 655, 910
MalI GATC 3 cut(s) 348, 634, 737
MboI GATC 3 cut(s) 346, 632, 735
MboII GAAGA 2 cut(s) 504, 515
MflI RGATCY 1 cut(s) 735
MhlI GDGCHC 4 cut(s) 162, 276, 435, 1037
MluCI AATT 5 cut(s) 341, 464, 508, 855, 873
MlyI GAGTC 3 cut(s) 50, 153, 971
Mph1103I ATGCAT 1 cut(s) 620
MseI TTAA 2 cut(s) 893, 954
MspI CCGG 4 cut(s) 192, 234, 263, 276
MspR9I CCNGG 6 cut(s) 234, 263, 264, 276, 277, 837
MvaI CCWGG 1 cut(s) 837
MwoI GCNNNNNNNGC 1 cut(s) 722
NciI CCSGG 5 cut(s) 234, 263, 264, 276, 277
NdeII GATC 3 cut(s) 346, 632, 735
NheI GCTAGC 1 cut(s) 712
NlaIII CATG 7 cut(s) 310, 416, 439, 618, 656, 773, 814
NlaIV GGNNCC 2 cut(s) 202, 394
NmeAIII GCCGAG 2 cut(s) 18, 413
NmuCI GTSAC 4 cut(s) 220, 302, 316, 655
NsiI ATGCAT 1 cut(s) 620
NspI RCATGY 1 cut(s) 416
PagI TCATGA 1 cut(s) 435
PcsI WCGNNNNNNNCGW 2 cut(s) 45, 153
PflFI GACNNNGTC 2 cut(s) 143, 314
PflMI CCANNNNNTGG 2 cut(s) 620, 842
PkrI GCNGC 1 cut(s) 197
PleI GAGTC 3 cut(s) 50, 152, 971
PmaCI CACGTG 2 cut(s) 157, 220
PmlI CACGTG 2 cut(s) 157, 220
PpsI GAGTC 3 cut(s) 50, 152, 971
Ppu21I YACGTR 2 cut(s) 157, 220
PshBI ATTAAT 1 cut(s) 954
Psp124BI GAGCTC 1 cut(s) 435
Psp1406I AACGTT 1 cut(s) 909
Psp6I CCWGG 1 cut(s) 835
PspCI CACGTG 2 cut(s) 157, 220
PspGI CCWGG 1 cut(s) 835
PspN4I GGNNCC 2 cut(s) 202, 394
PspPI GGNCC 4 cut(s) 139, 200, 578, 986
PsuI RGATCY 1 cut(s) 735
PsyI GACNNNGTC 2 cut(s) 143, 314
RsaI GTAC 3 cut(s) 260, 625, 871
RsaNI GTAC 3 cut(s) 259, 624, 870
SacI GAGCTC 1 cut(s) 435
SaqAI TTAA 2 cut(s) 893, 954
SatI GCNGC 1 cut(s) 196
Sau3AI GATC 3 cut(s) 346, 632, 735
Sau96I GGNCC 4 cut(s) 139, 200, 578, 986
SchI GAGTC 3 cut(s) 50, 153, 971
ScrFI CCNGG 6 cut(s) 234, 263, 264, 276, 277, 837
SduI GDGCHC 4 cut(s) 162, 276, 435, 1037
SfaNI GCATC 1 cut(s) 526
SfcI CTRYAG 1 cut(s) 751
SgrAI CRCCGGYG 1 cut(s) 191
SinI GGWCC 4 cut(s) 139, 200, 578, 986
SmaI CCCGGG 2 cut(s) 264, 277
SmlI CTYRAG 2 cut(s) 26, 358
SmoI CTYRAG 2 cut(s) 26, 358
Sse9I AATT 5 cut(s) 341, 464, 508, 855, 873
SsiI CCGC 3 cut(s) 195, 198, 686
SspMI CTAG 2 cut(s) 713, 974
SstI GAGCTC 1 cut(s) 435
StyD4I CCNGG 6 cut(s) 232, 261, 262, 274, 275, 835
StyI CCWWGG 1 cut(s) 641
TaaI ACNGT 3 cut(s) 271, 478, 677
TaiI ACGT 5 cut(s) 159, 222, 249, 315, 912
TaqI TCGA 2 cut(s) 48, 635
TaqII GACCGA 1 cut(s) 156
TasI AATT 5 cut(s) 341, 464, 508, 855, 873
TatI WGTACW 1 cut(s) 869
TauI GCSGC 1 cut(s) 198
Tru1I TTAA 2 cut(s) 893, 954
Tru9I TTAA 2 cut(s) 893, 954
TscAI CASTG 4 cut(s) 325, 403, 682, 732
TseFI GTSAC 4 cut(s) 220, 302, 316, 655
Tsp45I GTSAC 4 cut(s) 220, 302, 316, 655
TspDTI ATGAA 7 cut(s) 52, 516, 641, 827, 938, 972, 1029
TspGWI ACGGA 1 cut(s) 929
TspMI CCCGGG 2 cut(s) 262, 275
TspRI CASTG 4 cut(s) 325, 403, 682, 732
Tth111I GACNNNGTC 2 cut(s) 143, 314
Van91I CCANNNNNTGG 2 cut(s) 620, 842
VpaK11BI GGWCC 4 cut(s) 139, 200, 578, 986
VspI ATTAAT 1 cut(s) 954
XagI CCTNNNNNAGG 1 cut(s) 50
XapI RAATTY 3 cut(s) 341, 508, 855
XceI RCATGY 1 cut(s) 416
XmaI CCCGGG 2 cut(s) 262, 275
XspI CTAG 2 cut(s) 713, 974
ZraI GACGTC 1 cut(s) 313
Zsp2I ATGCAT 1 cut(s) 620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.