Rorug07G0112600

Acetylornithine deacetylase-like

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
8800534 .. 8807419
6886 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0112600.1

Sequence Viewer

Length: 4494 bp
ATGGCAGCTTCGGAGCAGCCCCAGGAAGTTGTCTCATGGCTCAGAGCCCTACCCGTAGCTCCGGAGTACCACCCTACTTGGGCCGAGTTCCAAGATCCGATTGCCTACATTTTCAAGATCGAGAAGGAGGCTTCCAAGTATGGAATCTGCAAAATCGTGCCGCCGGTGCCGCCCGCTCCGAAGAAAACAGCAATTGCTAATCTCAACAAGTCTCTGGTGGCGCGTGGTGGGCCTTCGGTTGGAAAAGGCCCCAAGGCCCTGCCCACATTCACTACCCGGCAGCAGCAGATCGGGTTCTGCCCCCGGAAGGCCCGCCCCGTGCAGAGACCCGTCTGGCAGAGCGGCGAGCACTACACATTCAACCAATTCGAGGCCAAGGCCAAGAGCTTTGAGAAGAGCTACTTGAAGAAGCGGAGGAAGAAGGGAGGCCTGAACCCTCTGGATATCGAGACCCTTTACTGGAAAGCCACTGTGGACAAGCCCTTTTCCGTTGAGTACGCCAATGACATGCCCGGCTCGGCTTTCGTGCCGCTGAGCAGCAAGAAGAGTGGCGCCAGCACTAGCAGGGAGGCAGGGGATGGCGTCACGCTGGGAGAGACGGCCTGGAATATGAGGGGGGTTTCGAGGTCGAGAGGGTCTCTGTTGAGGTTTATGAAGGAGGAGATTCCCGGGGTTACGTGTCCAATGGTGTATGTGGCCATGATGTTCAGCTGGTTTGCTTGGCACGTGGAGGATCATGACTTGCATAGCTTGAATTATCTGCATTTGGGGGCAGGGAAGACTTGGTATGGCGTGCCCAGGGAGGCTGCCGTCGCGTTCGAGGAGGTGGTCAGAGTTCAGGGGTATGGAGGAGAGATCAATCCTCTTGTTACATTTGCGACGCTTGGTGAGAAGACCACCGTGATGTCACCTGAAGTCTTTATTAGTTCAGGGATTCCATGCTGCAGGTTAGTGCAAAATGCTGGGGAATTTGTTGTCACTTTTCCAAGAGCCTATCACACTGGATTCAGTCACGGATTTAATTGTGGGGAGGCAGCCAACATTGCAACTCCTGAGTGGTTGAGGGTTGCCAATGATGCTGCTGTCCGACGAGCTTCAATCAATTATCCTCCTATGGTGTCTCATTTTCAGTTACTTTATGATCTTGCTCTAGCATTATGTTCAAGAACGCCTGTGCGCAATAGTGCTGAACCTCGAAGTTCTCGACTAAAAGATAAGAAAAAGGGTGAAGGAGAAACAGTAGTTAAAGGTTTATTTGTGAAGAATGTCATTCAGAACAATGAGCTGCTTCATGTTCTTGGAAAAGGGTCGTCAATTGTACTTCTACCACAGAGTTCTTCAGACATTTCTGTTTGTTCAAAATTACGTGTTGGTTCACAGTTAAGAGTAAACCCTGATGATCTCATGATAGACGGGAAGCAGGGAATCCAGCAGGTAAAAGGGTTGTATTCAGTGAAAGGAAAACTTGCATCTTTATGTGACAGTAGCCACCATCCCTCATTAAATGCAAATGGCAATGCAAGTACTCCTTCTAAGATGTTGAACATGAGCGCTAAAAGAGAAAGTAATGTTGAAGGCGAAGGGTTGTCAGATCAGAGACTATTTTCTTGTGTTACATGTGGAATTTTGAGCTTTTCATGTGTTGCTATAATTCAACCAAGAGAAGCAGCAGCCAGATATCTCATGTCAGCAGATCGTAGTTTTTTCAACGATTGGGCTGTTGATTGTGAGCCTATCCAGGTTGCAAATGGAGATCCAAATAGTTCAAAGAAAGGTCCCTGTACAGAAACAGGATTGATGCAAAAGAGTACCCATGATGGTTTATATGATGTGCCCGTTCAGTCTGCTGATTATAGAAATCAGATCACAGATCCAATCAATGAAGTTGATTCAAATACTGAAATGCACAGAGATACTAATGCGCTTGGGCTATTAGCTTTGACCTATGGAGATTCATCTGACTCGGAGGAAGATCAGGCTGAACCAGATGTTCCTGTTTGTCGTGACGAAACAAACTTGTCAGACTGTTCTTTGGAAGGTAGATATGAGTATAAAAGTGCTAGTCCTCCTTTGAGAGACTCTTATGGAGGTACAGCTGGGGTTCACAGTCCAACTTCACCAGGATTTGATTGTGGTAATGAACTCCCGACTGTTGATGGCAATGGGGAAAATAGACGTGAAGCAACTAATTTCAAGGATAATGGTCATCAATATATTGACTGTTCTGTTGATCTTGACACAAATAATCTTGCTTTGACAAAGACAAATGGTTTGGCGGGTACATCTATAGATCCAGTAAAGGTTTCATATTCTGGCTCCCCAGATGCATTTGACGTTCAACCAACACGATTTGGTCAGGCCACTTTACCGAAAGAGAGTACAGGCACATCATTTTTTCCAGGATGTGACCAGGATTCTTCTAGAATGCATGTGTTCTGCCTTGAGCATGCTGTAGAGGTTGAGCAGCAGCTCCGTTCATTTGGAGGTGCCCATATATTACTCCTTTGTCATCCAGACTATCCGCGGATAGTGGATGAAGCAAAAGAAATAGCAGAAGAACTGGGAGTAAATTATCCCTGGAATGATATGGTATTCAGGGATGCCACCAGGGAGGATGAGGAGAGGATTCAGTCAGCTCTGGATAGTGAGGAAGCCATTGCTGGGAATGGAGACTGGGCTGTAAAGATGGGGATCAATCTCTTCTACAGTGCCAGCCTTAGCCGCTCTCATCTTTATAGTAAGCAGATGCCATACAATTCTGTTATATACAATGCATTTGGTCGTAGTTCTCCAGCTAGCTCGCCTGCAGGACCTGAGGTCTGTGGGAGGAGGCCTGCCAAACAGAAAAAGATAGTGGTAGGGAAATGGTGCGGTAAAGTTTGGATGTCAAATCAAGTTCATCCCTTCTTAATAAAAAGGGATCATGAAGAGAAAAAAGTAGAGCTAGAACAGAGGAGGTTCCATGATTCAGCAATGCCAGATGAGAAGCTTGATGAAAAATCAGAAAGCACACGCAAAACTGAGAAAAGTATGGTGACTAAACAGTATTCTAGGAAGAGGAAAATGACTGTAGAGGGTGGGACAACCAAGAAAGCAAAATGTCCTGATGCAGTTTCTGCTCATTCAGTAGATGATAATTCCCATCAGCAGCAGAAGAGGTTTCTCAAGAACAAGCAAGCCAAATATATAGAGAGTGGTCCAACCAAGAAAGCAAAGTTTACTGAGACGGAAGATGCAGTGTCAGGTGATTCAATGGAAGATGATTTCCGTCAGCAAAATAGGAGGACTCTTCGAAGCGAGCAAGCCAAGTATATTGAGGGAGATGATGATGTTTCAGATGATTCAATGGGAGTTGATTCTCATCAGCAGCAGAGGCGGATTGCTAAAAGTAAGCAAGCAAAGTATATTGCCAGAGATTTCTCTATGTTGTCAGATGACTCAGTTGGAGTGAATTCTGATCATCAGCAGAGGCGGGTTGCTGAAAGTAATGCCAGGGAGTTCTCTGCGGTTTCAGATGATTCGCTTGAGGAAAATATCCATCAGCTGCATAGGAGGTCACTTAGACGCAACAAAGGTAAATGCATTGGGAGAGGAAATTTGACTTCACAAAATCGTCACGGGGTTAGTTCTCATCAGCAACAAAGGAGGACTTCTAAAAGCAAGCAGGCCAAAATTGTGGAGAGAGAAGATGCAGCTCTGGATGACACACCGGACGATAATGCTGCACTGCAGCTTAAGAGTTTCCGAGGCAGGCAAATAAAACCAGAGACCGTTCAGCAAAAGAAACAGGAAACTCCTCGCCGTGTGAAGCAAGGCTCCCGCCGTCTTCAAGAAACCCAGCAAAAGACTCCCAGGATCCAAAATAATCAATCTGAACAAAACACCGTTGATGTAAATGCTGAGGAACCAGAAGGTGGGCCTAGCACGCGACTTAGAAAAAGACCTCCAAAAGAGCAGCCAGAAACCGGTAGGAAAAAGGCAAAAGAGCAGCCAGAAACCGGAAGGAAAAAGGCAAGAGAGCAGCAACAAACTGGTAGGATAAAGGTAAACACTGCTTTAGCTGTGAAGACAAAGAATGCTTCAGCTCGGAAGGGAAAGAATGCTCCAGCAGTGAGGGAAGAGGAAGCAGAATACTTGTGTGACGTTGAGGGGTGCACCATGAGTTTTGGCACGAAACAAGAGCTAAATCTCCACAAGAAAAACGTGTGTCCAGTCAAGGGGTGTGGAAAGAAATTCTTCTCGCACAAGTATCTGGTGCAACATCGTCGAGTTCATGAGGATGACCGCCCCCTTCGGTGCCCTTGGAAGGGATGCAAGATGACATTCAAGTGGGCATGGGCTCGGACTGAGCACATTAGGGTACACACAGGTGCCCGTCCCTACGTGTGTGCAGAGCCAGGGTGTGGGCAGACCTTCCGGTTTGTGTCAGATTTCAGCCGTCATAAGCGGAAGACTGGGCATTCGGTAAAGAAAGGTAAGGGGCGATCGCGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

1497

Amino Acids

166.94

Weight (kDa)

9.03

Isoelectric Point (pI)

50.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjN PF02375 21 - 54 1.9e-15 jmjN domain
JmjC PF02373 230 - 347 1.2e-34 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1178
Acc36I ACCTGC 2 cut(s) 936, 1423
AccB1I GGYRCC 5 cut(s) 166, 551, 2486, 4296, 4370
AccB7I CCANNNNNTGG 2 cut(s) 3914, 4403
AccBSI CCGCTC 3 cut(s) 176, 342, 2724
AccII CGCG 5 cut(s) 223, 815, 2524, 3928, 4489
AccIII TCCGGA 1 cut(s) 61
AclWI GGATC 9 cut(s) 89, 741, 1748, 1865, 2285, 2699, 2928, 3850, 3863
AcoI YGGCCR 1 cut(s) 696
AcsI RAATTY 5 cut(s) 968, 1623, 3451, 3595, 4232
AcuI CTGAAG 3 cut(s) 933, 1323, 4065
AcvI CACGTG 1 cut(s) 727
AcyI GRCGYC 2 cut(s) 552, 582
AfeI AGCGCT 1 cut(s) 1552
AflII CTTAAG 1 cut(s) 3734
AflIII ACRYGT 5 cut(s) 677, 1366, 1616, 4203, 4383
AgeI ACCGGT 1 cut(s) 3965
AhdI GACNNNNNGTC 1 cut(s) 2816
AjiI CACGTC 1 cut(s) 2177
AleI CACNNNNGTG 1 cut(s) 4368
Alw21I GWGCWC 3 cut(s) 351, 4157, 4353
Alw44I GTGCAC 1 cut(s) 4153
AlwI GGATC 9 cut(s) 89, 741, 1748, 1865, 2285, 2699, 2928, 3850, 3863
AlwNI CAGNNNCTG 2 cut(s) 2813, 3116
Ama87I CYCGRG 1 cut(s) 668
Aor13HI TCCGGA 1 cut(s) 61
Aor51HI AGCGCT 1 cut(s) 1552
ApaLI GTGCAC 1 cut(s) 4153
ApoI RAATTY 5 cut(s) 968, 1623, 3451, 3595, 4232
ArsI GACNNNNNNTTYG 4 cut(s) 2254, 2286, 4444, 4476
AsiGI ACCGGT 1 cut(s) 3965
AsiSI GCGATCGC 1 cut(s) 4487
Asp700I GAANNNNTTC 1 cut(s) 4235
AspLEI GCGC 5 cut(s) 223, 554, 1179, 1553, 1924
AspS9I GGNCC 9 cut(s) 81, 230, 248, 256, 310, 1775, 2810, 3197, 3917
AsuC2I CCSGG 5 cut(s) 277, 304, 513, 669, 670
AsuHPI GGTGA 6 cut(s) 899, 900, 1238, 2109, 3046, 3257
AsuII TTCGAA 1 cut(s) 3292
AsuNHI GCTAGC 1 cut(s) 2795
AvaI CYCGRG 1 cut(s) 668
AvaII GGWCC 3 cut(s) 1775, 2810, 3197
AxyI CCTNAGG 1 cut(s) 2814
BaeGI GKGCMC 6 cut(s) 798, 1836, 2491, 4157, 4301, 4375
BalI TGGCCA 1 cut(s) 698
BamHI GGATCC 1 cut(s) 3855
BanI GGYRCC 5 cut(s) 166, 551, 2486, 4296, 4370
BanII GRGCYC 2 cut(s) 49, 4342
BbrPI CACGTG 1 cut(s) 727
BbsI GAAGAC 5 cut(s) 785, 899, 3818, 4073, 4457
Bbv12I GWGCWC 3 cut(s) 351, 4157, 4353
BbvCI CCTCAGC 1 cut(s) 3900
BccI CCATC 7 cut(s) 572, 1500, 1811, 2150, 2680, 3150, 3546
BceAI ACGGC 5 cut(s) 615, 794, 3786, 3807, 4422
BcgI CGANNNNNNTGC 4 cut(s) 3704, 3738, 4247, 4281
BclI TGATCA 1 cut(s) 3457
BcnI CCSGG 5 cut(s) 277, 304, 513, 669, 670
BfaI CTAG 8 cut(s) 561, 1151, 2061, 2421, 2796, 2945, 3051, 3921
BfmI CTRYAG 7 cut(s) 943, 2286, 2451, 2704, 2805, 3069, 3728
BfoI RGCGCY 2 cut(s) 555, 1554
BfrI CTTAAG 1 cut(s) 3734
BfuAI ACCTGC 2 cut(s) 936, 1423
BlpI GCTNAGC 1 cut(s) 533
BmcAI AGTACT 1 cut(s) 1525
Bme18I GGWCC 3 cut(s) 1775, 2810, 3197
BmeRI GACNNNNNGTC 1 cut(s) 2816
BmeT110I CYCGRG 1 cut(s) 668
BmgBI CACGTC 1 cut(s) 2177
BmgT120I GGNCC 9 cut(s) 81, 230, 248, 256, 310, 1775, 2810, 3197, 3917
BmrI ACTGGG 3 cut(s) 2570, 2683, 4464
BmtI GCTAGC 1 cut(s) 2799
BmuI ACTGGG 3 cut(s) 2570, 2683, 4464
BpiI GAAGAC 5 cut(s) 785, 899, 3818, 4073, 4457
BplI GAGNNNNNCTC 2 cut(s) 622, 654
BpmI CTGGAG 2 cut(s) 2775, 4089
Bpu10I CCTNAGC 2 cut(s) 2717, 3900
Bpu1102I GCTNAGC 1 cut(s) 533
Bpu14I TTCGAA 1 cut(s) 3292
BpuEI CTTGAG 3 cut(s) 2462, 3149, 3545
BpuMI CCSGG 5 cut(s) 277, 304, 513, 669, 670
BsaAI YACGTR 4 cut(s) 678, 727, 1367, 4384
BsaBI GATNNNNATC 2 cut(s) 2690, 3360
BsaHI GRCGYC 2 cut(s) 552, 582
BsaI GGTCTC 4 cut(s) 319, 443, 642, 3761
BsaWI WCCGGW 5 cut(s) 61, 3709, 3965, 3998, 4416
BsaXI ACNNNNNCTCC 2 cut(s) 1224, 1254
Bse118I RCCGGY 2 cut(s) 163, 3965
Bse1I ACTGG 8 cut(s) 464, 1006, 2294, 2565, 2678, 4036, 4211, 4459
Bse21I CCTNAGG 1 cut(s) 2814
Bse3DI GCAATG 5 cut(s) 1041, 1522, 2167, 2655, 2979
Bse8I GATNNNNATC 2 cut(s) 2690, 3360
BseAI TCCGGA 1 cut(s) 61
BseJI GATNNNNATC 2 cut(s) 2690, 3360
BseMI GCAATG 5 cut(s) 1041, 1522, 2167, 2655, 2979
BseMII CTCAG 9 cut(s) 55, 524, 1044, 2805, 3012, 3213, 3453, 3891, 4338
BseNI ACTGG 8 cut(s) 464, 1006, 2294, 2565, 2678, 4036, 4211, 4459
BseRI GAGGAG 7 cut(s) 674, 836, 864, 2633, 2842, 2968, 3786
BseSI GKGCMC 6 cut(s) 798, 1836, 2491, 4157, 4301, 4375
BseYI CCCAGC 5 cut(s) 589, 962, 2096, 2660, 3837
BsgI GTGCAG 3 cut(s) 341, 3708, 4410
Bsh1236I CGCG 5 cut(s) 223, 815, 2524, 3928, 4489
Bsh1285I CGRYCG 1 cut(s) 4487
BshNI GGYRCC 5 cut(s) 166, 551, 2486, 4296, 4370
BshTI ACCGGT 1 cut(s) 3965
BsiEI CGRYCG 1 cut(s) 4487
BsiHKAI GWGCWC 3 cut(s) 351, 4157, 4353
BsiHKCI CYCGRG 1 cut(s) 668
BslFI GGGAC 3 cut(s) 1761, 3094, 4362
BsmBI CGTCTC 2 cut(s) 590, 3218
BsmFI GGGAC 3 cut(s) 1761, 3094, 4362
BsmI GAATGC 4 cut(s) 2430, 4081, 4105, 4459
Bso31I GGTCTC 4 cut(s) 319, 443, 642, 3761
BsoBI CYCGRG 1 cut(s) 668
Bsp119I TTCGAA 1 cut(s) 3292
Bsp13I TCCGGA 1 cut(s) 61
Bsp1407I TGTACA 1 cut(s) 1781
Bsp1720I GCTNAGC 1 cut(s) 533
Bsp68I TCGCGA 1 cut(s) 4489
BspCNI CTCAG 9 cut(s) 54, 525, 1045, 2806, 3013, 3214, 3452, 3892, 4339
BspEI TCCGGA 1 cut(s) 61
BspFNI CGCG 5 cut(s) 223, 815, 2524, 3928, 4489
BspHI TCATGA 4 cut(s) 736, 1404, 2923, 4273
BspMAI CTGCAG 3 cut(s) 947, 2809, 3732
BspMI ACCTGC 2 cut(s) 936, 1423
BspOI GCTAGC 1 cut(s) 2799
BspPI GGATC 9 cut(s) 89, 741, 1748, 1865, 2285, 2699, 2928, 3850, 3863
BspQI GCTCTTC 1 cut(s) 389
BspT104I TTCGAA 1 cut(s) 3292
BspT107I GGYRCC 5 cut(s) 166, 551, 2486, 4296, 4370
BspTI CTTAAG 1 cut(s) 3734
BspTNI GGTCTC 4 cut(s) 319, 443, 642, 3761
BsrBI CCGCTC 3 cut(s) 176, 342, 2724
BsrDI GCAATG 5 cut(s) 1041, 1522, 2167, 2655, 2979
BsrFI RCCGGY 2 cut(s) 163, 3965
BsrGI TGTACA 1 cut(s) 1781
BsrI ACTGG 8 cut(s) 464, 1006, 2294, 2565, 2678, 4036, 4211, 4459
BssAI RCCGGY 2 cut(s) 163, 3965
BssNI GRCGYC 2 cut(s) 552, 582
BssT1I CCWWGG 3 cut(s) 252, 375, 4301
Bst6I CTCTTC 8 cut(s) 389, 539, 2705, 2922, 3050, 3149, 3294, 4113
BstACI GRCGYC 2 cut(s) 552, 582
BstAFI CTTAAG 1 cut(s) 3734
BstAPI GCANNNNNTGC 1 cut(s) 3116
BstAUI TGTACA 1 cut(s) 1781
BstBAI YACGTR 4 cut(s) 678, 727, 1367, 4384
BstBI TTCGAA 1 cut(s) 3292
BstDSI CCRYGG 1 cut(s) 2522
BstFNI CGCG 5 cut(s) 223, 815, 2524, 3928, 4489
BstH2I RGCGCY 2 cut(s) 555, 1554
BstHHI GCGC 5 cut(s) 223, 554, 1179, 1553, 1924
BstMCI CGRYCG 1 cut(s) 4487
BstNSI RCATGY 4 cut(s) 511, 1620, 2432, 2450
BstSFI CTRYAG 7 cut(s) 943, 2286, 2451, 2704, 2805, 3069, 3728
BstSLI GKGCMC 6 cut(s) 798, 1836, 2491, 4157, 4301, 4375
BstUI CGCG 5 cut(s) 223, 815, 2524, 3928, 4489
BstV2I GAAGAC 5 cut(s) 785, 899, 3818, 4073, 4457
BstX2I RGATCY 5 cut(s) 94, 1753, 1870, 2290, 3855
BstXI CCANNNNNNTGG 1 cut(s) 3676
BstYI RGATCY 5 cut(s) 94, 1753, 1870, 2290, 3855
Bsu36I CCTNAGG 1 cut(s) 2814
BtgI CCRYGG 1 cut(s) 2522
BtrI CACGTC 1 cut(s) 2177
BtsI GCAGTG 4 cut(s) 3243, 3725, 4050, 4116
BtsIMutI CAGTG 8 cut(s) 468, 999, 1458, 2713, 3243, 3725, 4050, 4116
BtuMI TCGCGA 1 cut(s) 4489
BveI ACCTGC 2 cut(s) 936, 1423
CaiI CAGNNNCTG 2 cut(s) 2813, 3116
CciI TCATGA 4 cut(s) 736, 1404, 2923, 4273
CfoI GCGC 5 cut(s) 223, 554, 1179, 1553, 1924
Cfr10I RCCGGY 2 cut(s) 163, 3965
Cfr13I GGNCC 9 cut(s) 81, 230, 248, 256, 310, 1775, 2810, 3197, 3917
Cfr42I CCGCGG 1 cut(s) 2525
Cfr9I CCCGGG 1 cut(s) 668
CseI GACGC 3 cut(s) 571, 889, 3573
CspAI ACCGGT 1 cut(s) 3965
CspCI CAANNNNNGTGG 6 cut(s) 59, 94, 529, 564, 4204, 4239
DinI GGCGCC 1 cut(s) 553
DriI GACNNNNNGTC 1 cut(s) 2816
EaeI YGGCCR 1 cut(s) 696
Eam1104I CTCTTC 8 cut(s) 389, 539, 2705, 2922, 3050, 3149, 3294, 4113
Eam1105I GACNNNNNGTC 1 cut(s) 2816
EarI CTCTTC 8 cut(s) 389, 539, 2705, 2922, 3050, 3149, 3294, 4113
EciI GGCGGA 1 cut(s) 3391
Eco130I CCWWGG 3 cut(s) 252, 375, 4301
Eco147I AGGCCT 2 cut(s) 429, 2833
Eco24I GRGCYC 2 cut(s) 49, 4342
Eco31I GGTCTC 4 cut(s) 319, 443, 642, 3761
Eco32I GATATC 2 cut(s) 445, 1679
Eco47I GGWCC 3 cut(s) 1775, 2810, 3197
Eco47III AGCGCT 1 cut(s) 1552
Eco57I CTGAAG 3 cut(s) 933, 1323, 4065
Eco72I CACGTG 1 cut(s) 727
Eco81I CCTNAGG 1 cut(s) 2814
Eco88I CYCGRG 1 cut(s) 668
EcoO109I RGGNCCY 4 cut(s) 248, 256, 1775, 2810
EcoRI GAATTC 1 cut(s) 3451
EcoRV GATATC 2 cut(s) 445, 1679
EcoT14I CCWWGG 3 cut(s) 252, 375, 4301
EcoT22I ATGCAT 4 cut(s) 2329, 2430, 2776, 3584
EcoT38I GRGCYC 2 cut(s) 49, 4342
EgeI GGCGCC 1 cut(s) 553
EheI GGCGCC 1 cut(s) 553
ErhI CCWWGG 3 cut(s) 252, 375, 4301
Esp3I CGTCTC 2 cut(s) 590, 3218
FaqI GGGAC 3 cut(s) 1761, 3094, 4362
FauI CCCGC 5 cut(s) 181, 320, 2269, 3465, 3827
FbaI TGATCA 1 cut(s) 3457
FriOI GRGCYC 2 cut(s) 49, 4342
FspBI CTAG 8 cut(s) 561, 1151, 2061, 2421, 2796, 2945, 3051, 3921
FspI TGCGCA 1 cut(s) 1178
GlaI GCGC 5 cut(s) 222, 553, 1178, 1552, 1923
GsaI CCCAGC 5 cut(s) 593, 966, 2100, 2664, 3841
GsuI CTGGAG 2 cut(s) 2775, 4089
HaeII RGCGCY 2 cut(s) 555, 1554
HgaI GACGC 3 cut(s) 571, 889, 3573
HhaI GCGC 5 cut(s) 223, 554, 1179, 1553, 1924
Hin1I GRCGYC 2 cut(s) 552, 582
Hin6I GCGC 5 cut(s) 221, 552, 1177, 1551, 1922
HinP1I GCGC 5 cut(s) 221, 552, 1177, 1551, 1922
HindIII AAGCTT 1 cut(s) 2987
HphI GGTGA 6 cut(s) 899, 900, 1238, 2109, 3046, 3257
Hpy166II GTNNAC 8 cut(s) 475, 1376, 1390, 2104, 3219, 4048, 4155, 4363
Hpy8I GTNNAC 8 cut(s) 475, 1376, 1390, 2104, 3219, 4048, 4155, 4363
Hpy99I CGWCG 4 cut(s) 815, 883, 1092, 4269
HpyCH4IV ACGT 8 cut(s) 677, 726, 1366, 2176, 2334, 4143, 4203, 4383
HpySE526I ACGT 8 cut(s) 677, 726, 1366, 2176, 2334, 4143, 4203, 4383
Hsp92I GRCGYC 2 cut(s) 552, 582
HspAI GCGC 5 cut(s) 221, 552, 1177, 1551, 1922
KasI GGCGCC 1 cut(s) 551
Kpn2I TCCGGA 1 cut(s) 61
Ksp22I TGATCA 1 cut(s) 3457
KspI CCGCGG 1 cut(s) 2525
LguI GCTCTTC 1 cut(s) 389
LmnI GCTCC 7 cut(s) 13, 64, 181, 2321, 2475, 3821, 4108
MaeI CTAG 8 cut(s) 561, 1151, 2061, 2421, 2796, 2945, 3051, 3921
MaeII ACGT 8 cut(s) 677, 726, 1366, 2176, 2334, 4143, 4203, 4383
MbiI CCGCTC 3 cut(s) 176, 342, 2724
MfeI CAATTG 2 cut(s) 192, 1314
MflI RGATCY 5 cut(s) 94, 1753, 1870, 2290, 3855
MlsI TGGCCA 1 cut(s) 698
MluNI TGGCCA 1 cut(s) 698
Mly113I GGCGCC 1 cut(s) 552
MlyI GAGTC 5 cut(s) 1955, 2072, 3280, 3431, 3841
MmeI TCCRAC 5 cut(s) 220, 1111, 2135, 3224, 3424
Mox20I TGGCCA 1 cut(s) 698
Mph1103I ATGCAT 4 cut(s) 2329, 2430, 2776, 3584
MroI TCCGGA 1 cut(s) 61
MroXI GAANNNNTTC 1 cut(s) 4235
MscI TGGCCA 1 cut(s) 698
MseI TTAA 6 cut(s) 1020, 1245, 1382, 1502, 2909, 3735
MslI CAYNNNNRTG 5 cut(s) 902, 1474, 4278, 4327, 4368
Msp20I TGGCCA 1 cut(s) 698
MspA1I CMGCKG 5 cut(s) 532, 711, 2096, 2524, 3544
MspCI CTTAAG 1 cut(s) 3734
MunI CAATTG 2 cut(s) 192, 1314
Mva1269I GAATGC 4 cut(s) 2430, 4081, 4105, 4459
MvnI CGCG 5 cut(s) 223, 815, 2524, 3928, 4489
NarI GGCGCC 1 cut(s) 552
NciI CCSGG 5 cut(s) 277, 304, 513, 669, 670
NheI GCTAGC 1 cut(s) 2795
NmeAIII GCCGAG 2 cut(s) 109, 497
NruI TCGCGA 1 cut(s) 4489
NsbI TGCGCA 1 cut(s) 1178
NsiI ATGCAT 4 cut(s) 2329, 2430, 2776, 3584
NspI RCATGY 4 cut(s) 511, 1620, 2432, 2450
NspV TTCGAA 1 cut(s) 3292
OliI CACNNNNGTG 1 cut(s) 4368
PaeI GCATGC 1 cut(s) 2450
PagI TCATGA 4 cut(s) 736, 1404, 2923, 4273
PasI CCCWGGG 1 cut(s) 798
PceI AGGCCT 2 cut(s) 429, 2833
PciI ACATGT 1 cut(s) 1616
PciSI GCTCTTC 1 cut(s) 389
PcsI WCGNNNNNNNCGW 1 cut(s) 1201
PctI GAATGC 4 cut(s) 2430, 4081, 4105, 4459
PdmI GAANNNNTTC 1 cut(s) 4235
PflMI CCANNNNNTGG 2 cut(s) 3914, 4403
PfoI TCCNGGA 1 cut(s) 2398
PinAI ACCGGT 1 cut(s) 3965
Ple19I CGATCG 1 cut(s) 4487
PleI GAGTC 5 cut(s) 1955, 2072, 3280, 3431, 3841
PluTI GGCGCC 1 cut(s) 555
PmaCI CACGTG 1 cut(s) 727
PmlI CACGTG 1 cut(s) 727
PpsI GAGTC 5 cut(s) 1955, 2072, 3280, 3431, 3841
Ppu21I YACGTR 4 cut(s) 678, 727, 1367, 4384
PpuMI RGGWCCY 2 cut(s) 1775, 2810
PscI ACATGT 1 cut(s) 1616
Psp5II RGGWCCY 2 cut(s) 1775, 2810
PspCI CACGTG 1 cut(s) 727
PspFI CCCAGC 5 cut(s) 589, 962, 2096, 2660, 3837
PspPI GGNCC 9 cut(s) 81, 230, 248, 256, 310, 1775, 2810, 3197, 3917
PspPPI RGGWCCY 2 cut(s) 1775, 2810
PstI CTGCAG 3 cut(s) 947, 2809, 3732
PstNI CAGNNNCTG 2 cut(s) 2813, 3116
PsuI RGATCY 5 cut(s) 94, 1753, 1870, 2290, 3855
PvuI CGATCG 1 cut(s) 4487
PvuII CAGCTG 3 cut(s) 711, 2096, 3544
RgaI GCGATCGC 1 cut(s) 4487
RruI TCGCGA 1 cut(s) 4489
RseI CAYNNNNRTG 5 cut(s) 902, 1474, 4278, 4327, 4368
SacII CCGCGG 1 cut(s) 2525
SapI GCTCTTC 1 cut(s) 389
SaqAI TTAA 6 cut(s) 1020, 1245, 1382, 1502, 2909, 3735
Sau96I GGNCC 9 cut(s) 81, 230, 248, 256, 310, 1775, 2810, 3197, 3917
SbfI CCTGCAGG 1 cut(s) 2809
ScaI AGTACT 1 cut(s) 1525
SchI GAGTC 5 cut(s) 1955, 2072, 3280, 3431, 3841
SdaI CCTGCAGG 1 cut(s) 2809
SfaAI GCGATCGC 1 cut(s) 4487
SfcI CTRYAG 7 cut(s) 943, 2286, 2451, 2704, 2805, 3069, 3728
SfoI GGCGCC 1 cut(s) 553
Sfr303I CCGCGG 1 cut(s) 2525
SfuI TTCGAA 1 cut(s) 3292
SgfI GCGATCGC 1 cut(s) 4487
SgrAI CRCCGGYG 1 cut(s) 163
SgrBI CCGCGG 1 cut(s) 2525
SinI GGWCC 3 cut(s) 1775, 2810, 3197
SmaI CCCGGG 1 cut(s) 670
SmiMI CAYNNNNRTG 5 cut(s) 902, 1474, 4278, 4327, 4368
SmlI CTYRAG 4 cut(s) 2441, 3164, 3524, 3734
SmoI CTYRAG 4 cut(s) 2441, 3164, 3524, 3734
SphI GCATGC 1 cut(s) 2450
Sse8387I CCTGCAGG 1 cut(s) 2809
SseBI AGGCCT 2 cut(s) 429, 2833
SspDI GGCGCC 1 cut(s) 551
SspMI CTAG 8 cut(s) 561, 1151, 2061, 2421, 2796, 2945, 3051, 3921
StuI AGGCCT 2 cut(s) 429, 2833
StyI CCWWGG 3 cut(s) 252, 375, 4301
TaiI ACGT 8 cut(s) 680, 729, 1369, 2179, 2337, 4146, 4206, 4386
TatI WGTACW 4 cut(s) 1318, 1523, 1781, 2378
TauI GCSGC 5 cut(s) 163, 172, 345, 532, 2724
Tru1I TTAA 6 cut(s) 1020, 1245, 1382, 1502, 2909, 3735
Tru9I TTAA 6 cut(s) 1020, 1245, 1382, 1502, 2909, 3735
TscAI CASTG 8 cut(s) 475, 1006, 1458, 2713, 3243, 3732, 4057, 4116
TspGWI ACGGA 5 cut(s) 478, 1029, 2462, 3242, 3257
TspMI CCCGGG 1 cut(s) 668
TspRI CASTG 8 cut(s) 475, 1006, 1458, 2713, 3243, 3732, 4057, 4116
Van91I CCANNNNNTGG 2 cut(s) 3914, 4403
Vha464I CTTAAG 1 cut(s) 3734
VneI GTGCAC 1 cut(s) 4153
VpaK11BI GGWCC 3 cut(s) 1775, 2810, 3197
XapI RAATTY 5 cut(s) 968, 1623, 3451, 3595, 4232
XbaI TCTAGA 1 cut(s) 2420
XceI RCATGY 4 cut(s) 511, 1620, 2432, 2450
XcmI CCANNNNNNNNNTGG 1 cut(s) 1745
XmaI CCCGGG 1 cut(s) 668
XmnI GAANNNNTTC 1 cut(s) 4235
XspI CTAG 8 cut(s) 561, 1151, 2061, 2421, 2796, 2945, 3051, 3921
ZrmI AGTACT 1 cut(s) 1525
Zsp2I ATGCAT 4 cut(s) 2329, 2430, 2776, 3584
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.