Rh7BG241800

Acetylornithine deacetylase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0005490
Physical Location & Seq
Reverse (-)
21326961 .. 21331916
4956 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG241800.1

Sequence Viewer

Length: 945 bp
ATGGCTTCCTCCACCACCGACGACCTCAAGAAAACCCTCGGCGACCTCGACAAGGACTCCTTCATATCCCTCCTCTCCAAGCTCATCGGCGAGGCCAAGTTCGTCCAGAACAACCCCCCCGACCTCATTCCTCAGGAGGACCGAGTCGTCAAGCACGTGCTCGCCTCTCTCTTGCCCCTTAGCACCACCACCGGCGGCGGACCCCTCCTCATCAATCACGTGACTTACCACCCCGGCAGGGGCAACGTGATTGTGGAGTACCCGGGGACTGTGCCCGGGAAAGTGCTGTCCTTTGTGGGGTGCCACATGGACGTCGTCACTGCCAATCCTGATGACTGGGAATTTGATCCCTTCTCCTTGAGCATTGATGGGGACAAACTGCGTGGCCGAGGCACCACTGATTGCTTAGGGCATGTTGCACTTGTAACTGAGCTCATGAGAAGGCTGGCGCAGACAAAACCAAAACTGAAGTCAACTGTGGTAGTTGTCTTGATAGCAAATGAAGAGAATTCTTCCATTGCAGGAGTTGGTGTGGATGCACTTGTGAAGGATGGGCTACTCAATAAGCTAAAGGATGGTCCTTTGTATTGGATAGATACAGCAGATAAACAACCATGCATTGGTACTGGTGGATCGATACCTTGGAAGCTTCATGTGACTGGGAAGCTTTTTCACAGTGGTTTACCGCACAAGGCTATAAACCCTTTGGAGCTAGCTATGGAAGCACTGAAGGAGATCCAATCGCGGTTCTATAGAGATTTTCCTCCCCATGATAAGGAAAAGGTGTATGGATATGCAACACCATCAACCATGAAGCCAACTCAATGGAAATGTAAGTTTCCAGGGCTTAAGCTTATGATGAACATGTTAAGAAAATGCTTTTACCATCCACGACGTTTTTCGTTTCCCAGATCCAGGAGGTGGAATAAATCAAATTCCTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00220 ko01100 ko01110 ko01130 ko01210 ko01230 map00220 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
M20_dimer Peptidase_M20 Peptidase_M28

Protein Analysis

314

Amino Acids

34.89

Weight (kDa)

9.22

Isoelectric Point (pI)

29.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peptidase_M28 PF04389 82 - 171 2.6e-06 Peptidase family M28
Peptidase_M20 PF01546 99 - 188 8e-16 Peptidase family M20/M25/M40
M20_dimer PF07687 207 - 250 1.3e-06 Peptidase dimerisation domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 146
AatII GACGTC 1 cut(s) 315
AccB1I GGYRCC 2 cut(s) 300, 392
AccB7I CCANNNNNTGG 2 cut(s) 620, 921
AccII CGCG 1 cut(s) 745
AciI CCGC 4 cut(s) 195, 198, 686, 745
AclWI GGATC 4 cut(s) 341, 640, 730, 906
AcoI YGGCCR 1 cut(s) 385
AcsI RAATTY 3 cut(s) 341, 508, 934
AcuI CTGAAG 2 cut(s) 488, 749
AcvI CACGTG 2 cut(s) 157, 220
AcyI GRCGYC 1 cut(s) 312
AfaI GTAC 2 cut(s) 260, 625
AfiI CCNNNNNNNGG 8 cut(s) 52, 238, 239, 297, 620, 775, 915, 921
AflII CTTAAG 1 cut(s) 848
AflIII ACRYGT 1 cut(s) 864
AjnI CCWGG 2 cut(s) 841, 914
AluBI AGCT 8 cut(s) 82, 433, 568, 649, 667, 712, 716, 853
AluI AGCT 8 cut(s) 82, 433, 568, 649, 667, 712, 716, 853
Alw21I GWGCWC 2 cut(s) 162, 435
AlwI GGATC 4 cut(s) 341, 640, 730, 906
Ama87I CYCGRG 2 cut(s) 262, 275
AoxI GGCC 2 cut(s) 93, 385
ApoI RAATTY 3 cut(s) 341, 508, 934
ArsI GACNNNNNNTTYG 4 cut(s) 326, 358, 455, 487
AspLEI GCGC 1 cut(s) 451
AspS9I GGNCC 3 cut(s) 139, 200, 578
AsuC2I CCSGG 5 cut(s) 234, 263, 264, 276, 277
AsuNHI GCTAGC 1 cut(s) 712
AvaI CYCGRG 2 cut(s) 262, 275
AvaII GGWCC 3 cut(s) 139, 200, 578
AxyI CCTNAGG 1 cut(s) 132
BaeGI GKGCMC 1 cut(s) 276
BanI GGYRCC 2 cut(s) 300, 392
BanII GRGCYC 1 cut(s) 435
BbrPI CACGTG 2 cut(s) 157, 220
Bbv12I GWGCWC 2 cut(s) 162, 435
BccI CCATC 5 cut(s) 362, 545, 569, 811, 894
BciT130I CCWGG 2 cut(s) 843, 916
BcnI CCSGG 5 cut(s) 234, 263, 264, 276, 277
BfaI CTAG 1 cut(s) 713
BfmI CTRYAG 1 cut(s) 751
BfrI CTTAAG 1 cut(s) 848
BisI GCNGC 1 cut(s) 196
BlsI GCNGC 1 cut(s) 197
Bme1390I CCNGG 7 cut(s) 234, 263, 264, 276, 277, 843, 916
Bme18I GGWCC 3 cut(s) 139, 200, 578
BmeT110I CYCGRG 2 cut(s) 262, 275
BmgT120I GGNCC 3 cut(s) 139, 200, 578
BmiI GGNNCC 3 cut(s) 202, 302, 394
BmrFI CCNGG 7 cut(s) 234, 263, 264, 276, 277, 843, 916
BmrI ACTGGG 2 cut(s) 346, 669
BmsI GCATC 1 cut(s) 526
BmtI GCTAGC 1 cut(s) 716
BmuI ACTGGG 2 cut(s) 346, 669
Bpu10I CCTNAGC 2 cut(s) 179, 406
BpuEI CTTGAG 2 cut(s) 11, 379
BpuMI CCSGG 5 cut(s) 234, 263, 264, 276, 277
Bsa29I ATCGAT 1 cut(s) 635
BsaAI YACGTR 2 cut(s) 157, 220
BsaHI GRCGYC 1 cut(s) 312
BsaJI CCNNGG 8 cut(s) 37, 232, 262, 263, 275, 388, 641, 842
BsaXI ACNNNNNCTCC 4 cut(s) 41, 71, 516, 546
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 238, 239, 297, 620, 775, 915, 921
Bse118I RCCGGY 1 cut(s) 191
Bse1I ACTGG 3 cut(s) 341, 631, 664
Bse21I CCTNAGG 1 cut(s) 132
Bse3DI GCAATG 1 cut(s) 516
BseBI CCWGG 2 cut(s) 843, 916
BseCI ATCGAT 1 cut(s) 635
BseDI CCNNGG 8 cut(s) 37, 232, 262, 263, 275, 388, 641, 842
BseGI GGATG 4 cut(s) 541, 556, 580, 886
BseLI CCNNNNNNNGG 8 cut(s) 52, 238, 239, 297, 620, 775, 915, 921
BseMI GCAATG 1 cut(s) 516
BseMII CTCAG 2 cut(s) 146, 420
BseNI ACTGG 3 cut(s) 341, 631, 664
BseRI GAGGAG 2 cut(s) 62, 197
BseSI GKGCMC 1 cut(s) 276
Bsh1236I CGCG 1 cut(s) 745
BshFI GGCC 2 cut(s) 95, 387
BshNI GGYRCC 2 cut(s) 300, 392
BshVI ATCGAT 1 cut(s) 635
BsiHKAI GWGCWC 2 cut(s) 162, 435
BsiHKCI CYCGRG 2 cut(s) 262, 275
BsiSI CCGG 4 cut(s) 192, 234, 263, 276
BslFI GGGAC 2 cut(s) 280, 386
BslI CCNNNNNNNGG 8 cut(s) 52, 238, 239, 297, 620, 775, 915, 921
BsmFI GGGAC 2 cut(s) 280, 386
BsnI GGCC 2 cut(s) 95, 387
BsoBI CYCGRG 2 cut(s) 262, 275
Bsp1286I GDGCHC 3 cut(s) 162, 276, 435
Bsp143I GATC 4 cut(s) 346, 632, 735, 911
BspACI CCGC 4 cut(s) 195, 198, 686, 745
BspANI GGCC 2 cut(s) 95, 387
BspCNI CTCAG 2 cut(s) 145, 421
BspDI ATCGAT 1 cut(s) 635
BspFNI CGCG 1 cut(s) 745
BspHI TCATGA 1 cut(s) 435
BspLI GGNNCC 3 cut(s) 202, 302, 394
BspOI GCTAGC 1 cut(s) 716
BspPI GGATC 4 cut(s) 341, 640, 730, 906
BspT107I GGYRCC 2 cut(s) 300, 392
BspTI CTTAAG 1 cut(s) 848
BsrDI GCAATG 1 cut(s) 516
BsrFI RCCGGY 1 cut(s) 191
BsrI ACTGG 3 cut(s) 341, 631, 664
BssAI RCCGGY 1 cut(s) 191
BssECI CCNNGG 8 cut(s) 37, 232, 262, 263, 275, 388, 641, 842
BssMI GATC 4 cut(s) 346, 632, 735, 911
BssNI GRCGYC 1 cut(s) 312
BssT1I CCWWGG 1 cut(s) 641
Bst2UI CCWGG 2 cut(s) 843, 916
Bst4CI ACNGT 3 cut(s) 271, 478, 677
Bst6I CTCTTC 1 cut(s) 498
BstACI GRCGYC 1 cut(s) 312
BstAFI CTTAAG 1 cut(s) 848
BstBAI YACGTR 2 cut(s) 157, 220
BstC8I GCNNGC 3 cut(s) 162, 447, 714
BstDEI CTNAG 4 cut(s) 132, 179, 406, 429
BstENI CCTNNNNNAGG 1 cut(s) 50
BstF5I GGATG 4 cut(s) 541, 556, 580, 886
BstFNI CGCG 1 cut(s) 745
BstHHI GCGC 1 cut(s) 451
BstKTI GATC 4 cut(s) 349, 635, 738, 914
BstMBI GATC 4 cut(s) 346, 632, 735, 911
BstMWI GCNNNNNNNGC 1 cut(s) 722
BstNI CCWGG 2 cut(s) 843, 916
BstNSI RCATGY 2 cut(s) 416, 868
BstSCI CCNGG 7 cut(s) 232, 261, 262, 274, 275, 841, 914
BstSFI CTRYAG 1 cut(s) 751
BstSLI GKGCMC 1 cut(s) 276
BstUI CGCG 1 cut(s) 745
BstX2I RGATCY 2 cut(s) 735, 911
BstXI CCANNNNNNTGG 1 cut(s) 825
BstYI RGATCY 2 cut(s) 735, 911
Bsu15I ATCGAT 1 cut(s) 635
Bsu36I CCTNAGG 1 cut(s) 132
BsuRI GGCC 2 cut(s) 95, 387
BsuTUI ATCGAT 1 cut(s) 635
BtsCI GGATG 4 cut(s) 541, 556, 580, 886
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 4 cut(s) 318, 396, 682, 725
Cac8I GCNNGC 3 cut(s) 162, 447, 714
CciI TCATGA 1 cut(s) 435
CfoI GCGC 1 cut(s) 451
Cfr10I RCCGGY 1 cut(s) 191
Cfr13I GGNCC 3 cut(s) 139, 200, 578
Cfr9I CCCGGG 2 cut(s) 262, 275
ClaI ATCGAT 1 cut(s) 635
Csp6I GTAC 2 cut(s) 259, 624
CspCI CAANNNNNGTGG 2 cut(s) 364, 399
CviAII CATG 8 cut(s) 307, 413, 436, 615, 653, 770, 811, 865
CviQI GTAC 2 cut(s) 259, 624
DdeI CTNAG 4 cut(s) 132, 179, 406, 429
DpnI GATC 4 cut(s) 348, 634, 737, 913
DpnII GATC 4 cut(s) 346, 632, 735, 911
DrdI GACNNNNNNGTC 1 cut(s) 146
DseDI GACNNNNNNGTC 1 cut(s) 146
EaeI YGGCCR 1 cut(s) 385
Eam1104I CTCTTC 1 cut(s) 498
EarI CTCTTC 1 cut(s) 498
EciI GGCGGA 1 cut(s) 213
Ecl136II GAGCTC 1 cut(s) 433
Eco130I CCWWGG 1 cut(s) 641
Eco24I GRGCYC 1 cut(s) 435
Eco47I GGWCC 3 cut(s) 139, 200, 578
Eco53kI GAGCTC 1 cut(s) 433
Eco57I CTGAAG 2 cut(s) 488, 749
Eco72I CACGTG 2 cut(s) 157, 220
Eco81I CCTNAGG 1 cut(s) 132
Eco88I CYCGRG 2 cut(s) 262, 275
EcoICRI GAGCTC 1 cut(s) 433
EcoNI CCTNNNNNAGG 1 cut(s) 50
EcoRI GAATTC 1 cut(s) 508
EcoRII CCWGG 2 cut(s) 841, 914
EcoT14I CCWWGG 1 cut(s) 641
EcoT22I ATGCAT 1 cut(s) 620
EcoT38I GRGCYC 1 cut(s) 435
ErhI CCWWGG 1 cut(s) 641
FaeI CATG 8 cut(s) 310, 416, 439, 618, 656, 773, 814, 868
FalI AAGNNNNNCTT 2 cut(s) 44, 76
FaqI GGGAC 2 cut(s) 280, 386
FatI CATG 8 cut(s) 306, 412, 435, 614, 652, 769, 810, 864
Fnu4HI GCNGC 1 cut(s) 196
FokI GGATG 4 cut(s) 548, 563, 587, 873
FriOI GRGCYC 1 cut(s) 435
Fsp4HI GCNGC 1 cut(s) 196
FspBI CTAG 1 cut(s) 713
GlaI GCGC 1 cut(s) 450
GluI GCNGC 1 cut(s) 196
HaeIII GGCC 2 cut(s) 95, 387
HapII CCGG 4 cut(s) 192, 234, 263, 276
HhaI GCGC 1 cut(s) 451
Hin1I GRCGYC 1 cut(s) 312
Hin1II CATG 8 cut(s) 310, 416, 439, 618, 656, 773, 814, 868
Hin6I GCGC 1 cut(s) 449
HinP1I GCGC 1 cut(s) 449
HincII GTYRAC 1 cut(s) 474
HindII GTYRAC 1 cut(s) 474
HindIII AAGCTT 3 cut(s) 647, 665, 851
HinfI GANTC 2 cut(s) 56, 144
HpaII CCGG 4 cut(s) 192, 234, 263, 276
Hpy166II GTNNAC 2 cut(s) 474, 683
Hpy188III TCNNGA 6 cut(s) 28, 106, 134, 329, 436, 490
Hpy8I GTNNAC 2 cut(s) 474, 683
Hpy99I CGWCG 3 cut(s) 23, 317, 897
HpyAV CCTTC 5 cut(s) 70, 361, 435, 541, 724
HpyCH4III ACNGT 3 cut(s) 271, 478, 677
HpyCH4IV ACGT 5 cut(s) 156, 219, 246, 312, 895
HpyCH4V TGCA 5 cut(s) 419, 521, 539, 618, 797
HpyF10VI GCNNNNNNNGC 1 cut(s) 722
HpyF3I CTNAG 4 cut(s) 132, 179, 406, 429
HpySE526I ACGT 5 cut(s) 156, 219, 246, 312, 895
Hsp92I GRCGYC 1 cut(s) 312
Hsp92II CATG 8 cut(s) 310, 416, 439, 618, 656, 773, 814, 868
HspAI GCGC 1 cut(s) 449
Kzo9I GATC 4 cut(s) 346, 632, 735, 911
LmnI GCTCC 1 cut(s) 709
LweI GCATC 1 cut(s) 526
MaeI CTAG 1 cut(s) 713
MaeII ACGT 5 cut(s) 156, 219, 246, 312, 895
MaeIII GTNAC 4 cut(s) 220, 316, 424, 655
MalI GATC 4 cut(s) 348, 634, 737, 913
MboI GATC 4 cut(s) 346, 632, 735, 911
MboII GAAGA 2 cut(s) 504, 515
MflI RGATCY 2 cut(s) 735, 911
MhlI GDGCHC 3 cut(s) 162, 276, 435
MluCI AATT 3 cut(s) 341, 508, 934
MlyI GAGTC 2 cut(s) 50, 153
Mph1103I ATGCAT 1 cut(s) 620
MseI TTAA 2 cut(s) 849, 869
MspCI CTTAAG 1 cut(s) 848
MspI CCGG 4 cut(s) 192, 234, 263, 276
MspR9I CCNGG 7 cut(s) 234, 263, 264, 276, 277, 843, 916
MvaI CCWGG 2 cut(s) 843, 916
MvnI CGCG 1 cut(s) 745
MwoI GCNNNNNNNGC 1 cut(s) 722
NciI CCSGG 5 cut(s) 234, 263, 264, 276, 277
NdeII GATC 4 cut(s) 346, 632, 735, 911
NheI GCTAGC 1 cut(s) 712
NlaIII CATG 8 cut(s) 310, 416, 439, 618, 656, 773, 814, 868
NlaIV GGNNCC 3 cut(s) 202, 302, 394
NmeAIII GCCGAG 2 cut(s) 18, 413
NmuCI GTSAC 3 cut(s) 220, 316, 655
NsiI ATGCAT 1 cut(s) 620
NspI RCATGY 2 cut(s) 416, 868
PagI TCATGA 1 cut(s) 435
PciI ACATGT 1 cut(s) 864
PcsI WCGNNNNNNNCGW 2 cut(s) 45, 153
PflFI GACNNNGTC 2 cut(s) 143, 314
PflMI CCANNNNNTGG 2 cut(s) 620, 921
PfoI TCCNGGA 1 cut(s) 914
PkrI GCNGC 1 cut(s) 197
PleI GAGTC 2 cut(s) 50, 152
PmaCI CACGTG 2 cut(s) 157, 220
PmlI CACGTG 2 cut(s) 157, 220
PpsI GAGTC 2 cut(s) 50, 152
Ppu21I YACGTR 2 cut(s) 157, 220
PscI ACATGT 1 cut(s) 864
Psp124BI GAGCTC 1 cut(s) 435
Psp6I CCWGG 2 cut(s) 841, 914
PspCI CACGTG 2 cut(s) 157, 220
PspGI CCWGG 2 cut(s) 841, 914
PspN4I GGNNCC 3 cut(s) 202, 302, 394
PspPI GGNCC 3 cut(s) 139, 200, 578
PsuI RGATCY 2 cut(s) 735, 911
PsyI GACNNNGTC 2 cut(s) 143, 314
RsaI GTAC 2 cut(s) 260, 625
RsaNI GTAC 2 cut(s) 259, 624
SacI GAGCTC 1 cut(s) 435
SaqAI TTAA 2 cut(s) 849, 869
SatI GCNGC 1 cut(s) 196
Sau3AI GATC 4 cut(s) 346, 632, 735, 911
Sau96I GGNCC 3 cut(s) 139, 200, 578
SchI GAGTC 2 cut(s) 50, 153
ScrFI CCNGG 7 cut(s) 234, 263, 264, 276, 277, 843, 916
SduI GDGCHC 3 cut(s) 162, 276, 435
SfaNI GCATC 1 cut(s) 526
SfcI CTRYAG 1 cut(s) 751
SgrAI CRCCGGYG 1 cut(s) 191
SinI GGWCC 3 cut(s) 139, 200, 578
SmaI CCCGGG 2 cut(s) 264, 277
SmlI CTYRAG 3 cut(s) 26, 358, 848
SmoI CTYRAG 3 cut(s) 26, 358, 848
Sse9I AATT 3 cut(s) 341, 508, 934
SsiI CCGC 4 cut(s) 195, 198, 686, 745
SspMI CTAG 1 cut(s) 713
SstI GAGCTC 1 cut(s) 435
StyD4I CCNGG 7 cut(s) 232, 261, 262, 274, 275, 841, 914
StyI CCWWGG 1 cut(s) 641
TaaI ACNGT 3 cut(s) 271, 478, 677
TaiI ACGT 5 cut(s) 159, 222, 249, 315, 898
TaqI TCGA 2 cut(s) 48, 635
TaqII GACCGA 1 cut(s) 156
TasI AATT 3 cut(s) 341, 508, 934
TauI GCSGC 1 cut(s) 198
Tru1I TTAA 2 cut(s) 849, 869
Tru9I TTAA 2 cut(s) 849, 869
TscAI CASTG 4 cut(s) 325, 403, 682, 732
TseFI GTSAC 3 cut(s) 220, 316, 655
Tsp45I GTSAC 3 cut(s) 220, 316, 655
TspDTI ATGAA 5 cut(s) 52, 516, 641, 827, 875
TspMI CCCGGG 2 cut(s) 262, 275
TspRI CASTG 4 cut(s) 325, 403, 682, 732
Tth111I GACNNNGTC 2 cut(s) 143, 314
Van91I CCANNNNNTGG 2 cut(s) 620, 921
Vha464I CTTAAG 1 cut(s) 848
VpaK11BI GGWCC 3 cut(s) 139, 200, 578
XagI CCTNNNNNAGG 1 cut(s) 50
XapI RAATTY 3 cut(s) 341, 508, 934
XceI RCATGY 2 cut(s) 416, 868
XmaI CCCGGG 2 cut(s) 262, 275
XspI CTAG 1 cut(s) 713
ZraI GACGTC 1 cut(s) 313
Zsp2I ATGCAT 1 cut(s) 620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.