pycom06g04210

Pentatricopeptide repeat-containing protein At4g16835

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0015809
Physical Location & Seq
Reverse (-)
5286905 .. 5288932
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2028 bp
ATGGCAAATCTTAGAAACACAAAACCACAACCGTGGTTGGTGTCCAAAATTTTCCCACCAACCAAACACCAAACCGCCCCGCTCTCCACCTTCACAATCCAAAACCCTCATTCCAATCCAAACAAAGAAGCTCTTCCCGCCAACTTCCCCTCCTGCCCACCACAACAAACCCACTTGGCGTCAACCAGTAACAGTTTCTGCAATCAATCTAAACCGTTTGATCAACGTGAGTTTGGTGATGTCATTAAGTCAAATAAGATGATCACCAGCTACATTCGAGCTGGAGATTTAGATTCTGCTCTTGGGGTGTTCGAGAAGATGACGGTAAGGACGACAGTTACTTGGAATTCGATTTTATCCGGGTATGCGAAAACACCGGGGAAAATGAAAGAAGCCTGTGAGGTGTTCGAGAAATGTCCTGAACCAGACTCTTGTTCGTATAATATTATGTTGGCTTGTCATTTGCACAATTTGGATGTTGATGCTACTTTGAATTTCTTTCATAAGATGCCTGTTAAGGACACGGTGTCCTGGAATACTATGATATCGGGTTTTGCTGAAAACGGGAAGATGAGGGAAGCTCGTGAGCTGTTTTCGGTGATGCCAGAGAAGAACAGTGTCTCGTGGAGTGCAATGATTTCGGGGTATGTGAAATGTGGGGATTTGGACATGGCTGTGGAGTTGTTTGAGGTGGCACCGGTTAAGAGTGTTGTGGCGTGGACTGCTATGGTTACAGGGTATATGAAGTTTGGGAAGATTGAATTGGCCGAGAAATTGTTTAGAGATATGCCAGTGAAAAATTTAGTATCTTGGAATGCTATGATATCAGGTTATGTTGAAAATTGTCGAGCTGAAGAGGGTTTGAAAATTTTTAGGTCAATGATCGGAGATGGGGTTAGGCCAAACCCGTCAAGTTTAAGTAGTGTTCTACTGGGTTGCAGTAACCTATCAGCATTGAAGATGGGTAAGCAAGTGCATCAGCTGGTTTATAAATTTCAGTTATATAATGATACAACTGCAGGGACCTCTTTGGTTAGCATGTATTGTAAGTGTGGTAATTTGGAGGATGCTTGGAAATTGTTCATTGACATGGAACGAAAGGACGTTGTTACTTGGAATGCAATGGTTGCTGGTTATGCTCAGCATGGAGCAGGTCTTAAAGCTTTGCAGTTGTTTGATCAGATGAGGAATGAGGGAAAAGAGCCAGATTGGATAACGTTTGTTGCTGTGTTAATGGCTTGCAACCATGCAGGATTAGTGGATCTTGGGGTTCGGTATTTTGATTCGATGGCAAGGGATTACGGAGTTGAAGCAAAGCCAGACCACTATACGTGTATGGTAGACCTTCTTGGTCGAGCTGGTAGGCTAGTTGAAGCTGTGGATCTGATTAAGAAAATGCCATTTGAACCACATTCTGCCATTTTTGGAACTCTTTTGGGTGCTTGTCGGATCCACAAGAACTTAGAGCTAGCTGAGTTTGCTGCCAAGAAATTGCTCGATCTTGATCCAGCGAGTGCAGCTGGATATGTTCAACTTGCTAATGTTTATGCTGCAACAAACAGATGGGACCATGTTGCGAAGGTCCGGCGATTGATGAAAGAAAATAGGGTAGTGAAGACACCTGGGTATAGTTGGATTGAGGTGCAGAGTGTAGTGCATGAGTTCAGATCAGGTGATAGAGCACATCCAGAGTTGCCATCTATACACGAAAAACTATTTGAGCTCGATCGCAAAATGAAGTTGGCAGGCTATGTTCCAGATCTTGAATTTGCATTACATGATGTCGGGGAAGAGCAGAAACAGCAACTTCTGTTATGGCACAGCGAAAAACTAGCAATTGCATTCGGGCTTATAAAAGTGCCGTTAGGAAGCCCTATTCGCATCTTCAAAAACTTGAGAATATGCGGGGATTGCCATCGTGCCACCAAGTATGTATCAGCAATTGAAAAAAGGGAAATAATAGTTAGAGATACCACAAGGTTTCATCATTTCAGAAATGGGGTTTGTTCTTGTGGAGATTACTGGTAA

Protein Analysis

676

Amino Acids

75.88

Weight (kDa)

8.47

Isoelectric Point (pI)

41.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 173 - 205 8.2e-08 PPR repeat family
PPR_1 PF12854 174 - 201 1.2e-06 PPR repeat
PPR PF01535 176 - 205 2.5e-08 PPR repeat
PPR PF01535 207 - 230 1.5e-06 PPR repeat
PPR_2 PF13041 236 - 267 5.1e-06 PPR repeat family
PPR PF01535 238 - 267 9.2e-06 PPR repeat
PPR_2 PF13041 267 - 314 4.4e-08 PPR repeat family
PPR PF01535 269 - 299 8.1e-07 PPR repeat
PPR PF01535 342 - 368 6.9e-06 PPR repeat
PPR_2 PF13041 367 - 414 3.7e-11 PPR repeat family
PPR PF01535 370 - 399 6.6e-07 PPR repeat
E_motif PF20431 485 - 547 2e-18 E motif
DYW_deaminase PF14432 583 - 675 1.1e-43 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015809)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16835
fragaria_vesca FvH4_5g20040
malus_domestica MD04G1050300.v1.1 MD06G1049600.v1.1
prunus_persica Prupe.5G060100_v2.0.a1
pyrus_communis pycom06g04210
rosa_chinensis RchiOBHm_Chr7g0204911
rosa_laevigata RLG00000003422
rosa_multiflora Rmu_co8139782.1_g000001 Rmu_co8234171.1_g000001 Rmu_sc0002180.1_g000004
rosa_roxburghii Rroxscaffold_3G00252680
rosa_rugosa Rorug07G0086500
rosa_samantha Rh7BG214100
rosa_wichuraiana Rw7G018830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 990, 1853
Acc36I ACCTGC 1 cut(s) 1142
AccB1I GGYRCC 1 cut(s) 694
AccBSI CCGCTC 1 cut(s) 82
AccI GTMKAC 1 cut(s) 1341
AciI CCGC 4 cut(s) 75, 80, 138, 1905
AclI AACGTT 1 cut(s) 1217
AclWI GGATC 5 cut(s) 1269, 1389, 1444, 1457, 1499
AcoI YGGCCR 1 cut(s) 765
AcsI RAATTY 7 cut(s) 48, 346, 493, 799, 867, 992, 1766
AcuI CTGAAG 1 cut(s) 873
AcyI GRCGYC 1 cut(s) 179
AflIII ACRYGT 1 cut(s) 1331
AgeI ACCGGT 1 cut(s) 697
AhdI GACNNNNNGTC 1 cut(s) 526
AjnI CCWGG 2 cut(s) 530, 1621
AjuI GAANNNNNNNTTGG 2 cut(s) 746, 778
AleI CACNNNNGTG 1 cut(s) 31
Alw21I GWGCWC 2 cut(s) 1684, 1725
Alw26I GTCTC 1 cut(s) 625
AlwI GGATC 5 cut(s) 1269, 1389, 1444, 1457, 1499
AlwNI CAGNNNCTG 1 cut(s) 198
AoxI GGCC 2 cut(s) 765, 899
ApeKI GCWGC 3 cut(s) 1481, 1517, 1550
ApoI RAATTY 7 cut(s) 48, 346, 493, 799, 867, 992, 1766
AsiGI ACCGGT 1 cut(s) 697
Asp700I GAANNNNTTC 2 cut(s) 132, 1079
AspS9I GGNCC 3 cut(s) 1023, 1567, 1582
AsuC2I CCSGG 2 cut(s) 361, 378
AsuHPI GGTGA 4 cut(s) 248, 256, 610, 1685
AsuNHI GCTAGC 1 cut(s) 1468
AvaII GGWCC 3 cut(s) 1023, 1567, 1582
BamHI GGATCC 1 cut(s) 1449
BanI GGYRCC 1 cut(s) 694
BanII GRGCYC 1 cut(s) 1725
BauI CACGAG 2 cut(s) 582, 622
BbsI GAAGAC 1 cut(s) 1622
Bbv12I GWGCWC 2 cut(s) 1684, 1725
BbvI GCAGC 3 cut(s) 1468, 1529, 1537
BccI CCATC 6 cut(s) 884, 955, 1282, 1557, 1705, 1923
BceAI ACGGC 1 cut(s) 1846
BcgI CGANNNNNNTGC 2 cut(s) 621, 655
BciT130I CCWGG 2 cut(s) 532, 1623
BclI TGATCA 3 cut(s) 220, 261, 1177
BcnI CCSGG 2 cut(s) 361, 378
BcoDI GTCTC 1 cut(s) 625
BfaI CTAG 3 cut(s) 1367, 1469, 1832
BfmI CTRYAG 1 cut(s) 1017
BfuAI ACCTGC 1 cut(s) 1142
BglII AGATCT 1 cut(s) 1759
BisI GCNGC 3 cut(s) 1482, 1518, 1551
BlpI GCTNAGC 1 cut(s) 1140
BlsI GCNGC 3 cut(s) 1483, 1519, 1552
Bme1390I CCNGG 4 cut(s) 361, 378, 532, 1623
Bme18I GGWCC 3 cut(s) 1023, 1567, 1582
BmeRI GACNNNNNGTC 1 cut(s) 526
BmgT120I GGNCC 3 cut(s) 1023, 1567, 1582
BmiI GGNNCC 4 cut(s) 696, 1024, 1451, 1568
BmrFI CCNGG 4 cut(s) 361, 378, 532, 1623
BmrI ACTGGG 1 cut(s) 941
BmsI GCATC 6 cut(s) 472, 498, 591, 985, 1057, 1890
BmtI GCTAGC 1 cut(s) 1472
BmuI ACTGGG 1 cut(s) 941
BpiI GAAGAC 1 cut(s) 1622
BplI GAGNNNNNCTC 2 cut(s) 565, 597
BpmI CTGGAG 1 cut(s) 303
Bpu1102I GCTNAGC 1 cut(s) 1140
BpuEI CTTGAG 1 cut(s) 1915
BpuMI CCSGG 2 cut(s) 361, 378
BsaAI YACGTR 1 cut(s) 1332
BsaBI GATNNNNATC 2 cut(s) 1503, 1914
BsaHI GRCGYC 1 cut(s) 179
BsaJI CCNNGG 3 cut(s) 32, 377, 1622
BsaWI WCCGGW 1 cut(s) 697
BsaXI ACNNNNNCTCC 4 cut(s) 134, 164, 879, 909
Bse118I RCCGGY 1 cut(s) 697
Bse1I ACTGG 4 cut(s) 186, 791, 936, 2027
Bse3DI GCAATG 2 cut(s) 639, 1128
Bse8I GATNNNNATC 2 cut(s) 1503, 1914
BseBI CCWGG 2 cut(s) 532, 1623
BseDI CCNNGG 3 cut(s) 32, 377, 1622
BseGI GGATG 3 cut(s) 481, 1072, 1684
BseJI GATNNNNATC 2 cut(s) 1503, 1914
BseMI GCAATG 2 cut(s) 639, 1128
BseMII CTCAG 2 cut(s) 1154, 1464
BseNI ACTGG 4 cut(s) 186, 791, 936, 2027
BseXI GCAGC 3 cut(s) 1468, 1529, 1537
BsgI GTGCAG 2 cut(s) 1536, 1664
Bsh1285I CGRYCG 1 cut(s) 1729
BshFI GGCC 2 cut(s) 767, 901
BshNI GGYRCC 1 cut(s) 694
BshTI ACCGGT 1 cut(s) 697
BsiEI CGRYCG 1 cut(s) 1729
BsiHKAI GWGCWC 2 cut(s) 1684, 1725
BsiSI CCGG 4 cut(s) 360, 377, 698, 1585
BslFI GGGAC 2 cut(s) 1036, 1580
BsmAI GTCTC 1 cut(s) 625
BsmFI GGGAC 2 cut(s) 1036, 1580
BsmI GAATGC 3 cut(s) 820, 1123, 1841
BsnI GGCC 2 cut(s) 767, 901
Bsp1286I GDGCHC 2 cut(s) 1684, 1725
Bsp1720I GCTNAGC 1 cut(s) 1140
BspACI CCGC 4 cut(s) 75, 80, 138, 1905
BspANI GGCC 2 cut(s) 767, 901
BspCNI CTCAG 2 cut(s) 1153, 1465
BspLI GGNNCC 4 cut(s) 696, 1024, 1451, 1568
BspMAI CTGCAG 1 cut(s) 1021
BspMI ACCTGC 1 cut(s) 1142
BspOI GCTAGC 1 cut(s) 1472
BspPI GGATC 5 cut(s) 1269, 1389, 1444, 1457, 1499
BspQI GCTCTTC 2 cut(s) 138, 1785
BspT107I GGYRCC 1 cut(s) 694
BsrBI CCGCTC 1 cut(s) 82
BsrDI GCAATG 2 cut(s) 639, 1128
BsrFI RCCGGY 1 cut(s) 697
BsrI ACTGG 4 cut(s) 186, 791, 936, 2027
BssAI RCCGGY 1 cut(s) 697
BssECI CCNNGG 3 cut(s) 32, 377, 1622
BssNI GRCGYC 1 cut(s) 179
BssSI CACGAG 2 cut(s) 582, 622
Bst2BI CACGAG 2 cut(s) 582, 622
Bst2UI CCWGG 2 cut(s) 532, 1623
Bst4CI ACNGT 7 cut(s) 33, 194, 216, 325, 337, 526, 617
Bst6I CTCTTC 3 cut(s) 138, 849, 1785
BstACI GRCGYC 1 cut(s) 179
BstAPI GCANNNNNTGC 1 cut(s) 1127
BstBAI YACGTR 1 cut(s) 1332
BstC8I GCNNGC 3 cut(s) 1240, 1470, 1747
BstDEI CTNAG 4 cut(s) 11, 1140, 1462, 1473
BstDSI CCRYGG 1 cut(s) 32
BstF5I GGATG 3 cut(s) 481, 1072, 1684
BstMAI GTCTC 1 cut(s) 625
BstMCI CGRYCG 1 cut(s) 1729
BstMWI GCNNNNNNNGC 9 cut(s) 137, 722, 1127, 1136, 1478, 1517, 1801, 1878, 1911
BstNI CCWGG 2 cut(s) 532, 1623
BstNSI RCATGY 1 cut(s) 1042
BstSCI CCNGG 4 cut(s) 359, 376, 530, 1621
BstSFI CTRYAG 1 cut(s) 1017
BstV1I GCAGC 3 cut(s) 1468, 1529, 1537
BstV2I GAAGAC 1 cut(s) 1622
BstX2I RGATCY 4 cut(s) 1261, 1381, 1449, 1759
BstXI CCANNNNNNTGG 1 cut(s) 33
BstYI RGATCY 4 cut(s) 1261, 1381, 1449, 1759
BsuRI GGCC 2 cut(s) 767, 901
BtgI CCRYGG 1 cut(s) 32
BtsCI GGATG 3 cut(s) 481, 1072, 1684
BtsIMutI CAGTG 2 cut(s) 622, 798
BveI ACCTGC 1 cut(s) 1142
Cac8I GCNNGC 3 cut(s) 1240, 1470, 1747
CaiI CAGNNNCTG 1 cut(s) 198
Cfr10I RCCGGY 1 cut(s) 697
Cfr13I GGNCC 3 cut(s) 1023, 1567, 1582
CseI GACGC 1 cut(s) 168
CspAI ACCGGT 1 cut(s) 697
CviAII CATG 8 cut(s) 670, 1039, 1090, 1145, 1247, 1571, 1658, 1778
DdeI CTNAG 4 cut(s) 11, 1140, 1462, 1473
DriI GACNNNNNGTC 1 cut(s) 526
EaeI YGGCCR 1 cut(s) 765
Eam1104I CTCTTC 3 cut(s) 138, 849, 1785
Eam1105I GACNNNNNGTC 1 cut(s) 526
EarI CTCTTC 3 cut(s) 138, 849, 1785
Ecl136II GAGCTC 1 cut(s) 1723
Eco24I GRGCYC 1 cut(s) 1725
Eco32I GATATC 2 cut(s) 546, 825
Eco47I GGWCC 3 cut(s) 1023, 1567, 1582
Eco53kI GAGCTC 1 cut(s) 1723
Eco57I CTGAAG 1 cut(s) 873
EcoICRI GAGCTC 1 cut(s) 1723
EcoO109I RGGNCCY 1 cut(s) 1023
EcoRI GAATTC 1 cut(s) 346
EcoRII CCWGG 2 cut(s) 530, 1621
EcoRV GATATC 2 cut(s) 546, 825
EcoT38I GRGCYC 1 cut(s) 1725
FaeI CATG 8 cut(s) 673, 1042, 1093, 1148, 1250, 1574, 1661, 1781
FalI AAGNNNNNCTT 2 cut(s) 117, 149
FaqI GGGAC 2 cut(s) 1036, 1580
FatI CATG 8 cut(s) 669, 1038, 1089, 1144, 1246, 1570, 1657, 1777
FauI CCCGC 3 cut(s) 87, 145, 1898
FbaI TGATCA 3 cut(s) 220, 261, 1177
FblI GTMKAC 1 cut(s) 1341
Fnu4HI GCNGC 3 cut(s) 1482, 1518, 1551
FokI GGATG 3 cut(s) 488, 1079, 1671
FriOI GRGCYC 1 cut(s) 1725
Fsp4HI GCNGC 3 cut(s) 1482, 1518, 1551
FspBI CTAG 3 cut(s) 1367, 1469, 1832
GluI GCNGC 3 cut(s) 1482, 1518, 1551
GsuI CTGGAG 1 cut(s) 303
HaeIII GGCC 2 cut(s) 767, 901
HapII CCGG 4 cut(s) 360, 377, 698, 1585
HgaI GACGC 1 cut(s) 168
Hin1I GRCGYC 1 cut(s) 179
Hin1II CATG 8 cut(s) 673, 1042, 1093, 1148, 1250, 1574, 1661, 1781
HincII GTYRAC 1 cut(s) 183
HindII GTYRAC 1 cut(s) 183
HindIII AAGCTT 1 cut(s) 1161
HinfI GANTC 3 cut(s) 293, 428, 1283
HpaII CCGG 4 cut(s) 360, 377, 698, 1585
HphI GGTGA 4 cut(s) 248, 256, 610, 1685
Hpy166II GTNNAC 3 cut(s) 183, 720, 1342
Hpy188I TCNGA 6 cut(s) 887, 1182, 1386, 1449, 1667, 1994
Hpy188III TCNNGA 8 cut(s) 313, 409, 419, 584, 1502, 1688, 1757, 1763
Hpy8I GTNNAC 3 cut(s) 183, 720, 1342
HpyAV CCTTC 3 cut(s) 100, 1355, 1573
HpyCH4III ACNGT 7 cut(s) 33, 194, 216, 325, 337, 526, 617
HpyCH4IV ACGT 4 cut(s) 226, 1104, 1217, 1331
HpyF10VI GCNNNNNNNGC 9 cut(s) 137, 722, 1127, 1136, 1478, 1517, 1801, 1878, 1911
HpyF3I CTNAG 4 cut(s) 11, 1140, 1462, 1473
HpySE526I ACGT 4 cut(s) 226, 1104, 1217, 1331
Hsp92I GRCGYC 1 cut(s) 179
Hsp92II CATG 8 cut(s) 673, 1042, 1093, 1148, 1250, 1574, 1661, 1781
Ksp22I TGATCA 3 cut(s) 220, 261, 1177
LguI GCTCTTC 2 cut(s) 138, 1785
LmnI GCTCC 1 cut(s) 1148
Lsp1109I GCAGC 3 cut(s) 1468, 1529, 1537
LweI GCATC 6 cut(s) 472, 498, 591, 985, 1057, 1890
MaeI CTAG 3 cut(s) 1367, 1469, 1832
MaeII ACGT 4 cut(s) 226, 1104, 1217, 1331
MaeIII GTNAC 5 cut(s) 188, 337, 730, 941, 1108
MbiI CCGCTC 1 cut(s) 82
MfeI CAATTG 2 cut(s) 1836, 1941
MflI RGATCY 4 cut(s) 1261, 1381, 1449, 1759
MhlI GDGCHC 2 cut(s) 1684, 1725
MlyI GAGTC 1 cut(s) 422
MmeI TCCRAC 2 cut(s) 1427, 1613
MroXI GAANNNNTTC 2 cut(s) 132, 1079
MseI TTAA 7 cut(s) 246, 516, 702, 917, 1158, 1232, 1389
MslI CAYNNNNRTG 3 cut(s) 31, 674, 1088
MspA1I CMGCKG 2 cut(s) 982, 1520
MspI CCGG 4 cut(s) 360, 377, 698, 1585
MspR9I CCNGG 4 cut(s) 361, 378, 532, 1623
MunI CAATTG 2 cut(s) 1836, 1941
Mva1269I GAATGC 3 cut(s) 820, 1123, 1841
MvaI CCWGG 2 cut(s) 532, 1623
MwoI GCNNNNNNNGC 9 cut(s) 137, 722, 1127, 1136, 1478, 1517, 1801, 1878, 1911
NciI CCSGG 2 cut(s) 361, 378
NheI GCTAGC 1 cut(s) 1468
NlaIII CATG 8 cut(s) 673, 1042, 1093, 1148, 1250, 1574, 1661, 1781
NlaIV GGNNCC 4 cut(s) 696, 1024, 1451, 1568
NmeAIII GCCGAG 1 cut(s) 793
NspI RCATGY 1 cut(s) 1042
OliI CACNNNNGTG 1 cut(s) 31
PciSI GCTCTTC 2 cut(s) 138, 1785
PcsI WCGNNNNNNNCGW 1 cut(s) 329
PctI GAATGC 3 cut(s) 820, 1123, 1841
PdmI GAANNNNTTC 2 cut(s) 132, 1079
PfeI GAWTC 2 cut(s) 293, 1283
PfoI TCCNGGA 1 cut(s) 530
PinAI ACCGGT 1 cut(s) 697
PkrI GCNGC 3 cut(s) 1483, 1519, 1552
Ple19I CGATCG 1 cut(s) 1729
PleI GAGTC 1 cut(s) 422
PpsI GAGTC 1 cut(s) 422
Ppu21I YACGTR 1 cut(s) 1332
PpuMI RGGWCCY 1 cut(s) 1023
PsiI TTATAA 2 cut(s) 990, 1853
Psp124BI GAGCTC 1 cut(s) 1725
Psp1406I AACGTT 1 cut(s) 1217
Psp5II RGGWCCY 1 cut(s) 1023
Psp6I CCWGG 2 cut(s) 530, 1621
PspGI CCWGG 2 cut(s) 530, 1621
PspN4I GGNNCC 4 cut(s) 696, 1024, 1451, 1568
PspPI GGNCC 3 cut(s) 1023, 1567, 1582
PspPPI RGGWCCY 1 cut(s) 1023
PstI CTGCAG 1 cut(s) 1021
PstNI CAGNNNCTG 1 cut(s) 198
PsuI RGATCY 4 cut(s) 1261, 1381, 1449, 1759
PvuI CGATCG 1 cut(s) 1729
PvuII CAGCTG 2 cut(s) 982, 1520
RseI CAYNNNNRTG 3 cut(s) 31, 674, 1088
SacI GAGCTC 1 cut(s) 1725
SapI GCTCTTC 2 cut(s) 138, 1785
SaqAI TTAA 7 cut(s) 246, 516, 702, 917, 1158, 1232, 1389
SatI GCNGC 3 cut(s) 1482, 1518, 1551
Sau96I GGNCC 3 cut(s) 1023, 1567, 1582
SchI GAGTC 1 cut(s) 422
ScrFI CCNGG 4 cut(s) 361, 378, 532, 1623
SduI GDGCHC 2 cut(s) 1684, 1725
SfaNI GCATC 6 cut(s) 472, 498, 591, 985, 1057, 1890
SfcI CTRYAG 1 cut(s) 1017
SinI GGWCC 3 cut(s) 1023, 1567, 1582
SmiMI CAYNNNNRTG 3 cut(s) 31, 674, 1088
SmlI CTYRAG 1 cut(s) 1894
SmoI CTYRAG 1 cut(s) 1894
SsiI CCGC 4 cut(s) 75, 80, 138, 1905
SspI AATATT 1 cut(s) 445
SspMI CTAG 3 cut(s) 1367, 1469, 1832
SstI GAGCTC 1 cut(s) 1725
StyD4I CCNGG 4 cut(s) 359, 376, 530, 1621
TaaI ACNGT 7 cut(s) 33, 194, 216, 325, 337, 526, 617
TaiI ACGT 4 cut(s) 229, 1107, 1220, 1334
TaqI TCGA 9 cut(s) 277, 312, 350, 408, 847, 1286, 1354, 1497, 1725
TfiI GAWTC 2 cut(s) 293, 1283
Tru1I TTAA 7 cut(s) 246, 516, 702, 917, 1158, 1232, 1389
Tru9I TTAA 7 cut(s) 246, 516, 702, 917, 1158, 1232, 1389
TscAI CASTG 2 cut(s) 622, 798
TseI GCWGC 3 cut(s) 1481, 1517, 1550
TspDTI ATGAA 7 cut(s) 401, 491, 758, 1072, 1610, 1751, 1973
TspGWI ACGGA 1 cut(s) 1317
TspRI CASTG 2 cut(s) 622, 798
VpaK11BI GGWCC 3 cut(s) 1023, 1567, 1582
XapI RAATTY 7 cut(s) 48, 346, 493, 799, 867, 992, 1766
XceI RCATGY 1 cut(s) 1042
XmiI GTMKAC 1 cut(s) 1341
XmnI GAANNNNTTC 2 cut(s) 132, 1079
XspI CTAG 3 cut(s) 1367, 1469, 1832
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.