Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0001060

Physical Location & Seq

Genomic Coordinates Forward (+)

9528671 .. 9536801

Gene Structure 8131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g06180.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGCGGGTCAAAGAGATGCACCCGCTCTGCTGCATCACGCTCGAGAGCGCGGGTCTCGGTGACCAGTCGCCGGACATGCCGCTCGCCCGGACCCGGAGCCTTCCAGCGAGTCTGGCCGCGGCGCAGGTCCGATCTGACGGCAATGCCGCCGTCGGGGCATCGGGATCTGAGGCCACCGTAGCCGGAGTCCTCCACAAGTGGACGAATTACAGCAAGGGGTGGAGATCCAGGTGGTTCCTCCTCCGCAACGGCGTCCTCTCCTACACCAAGATACGACGACCCGAAACGCTGAGCCTGTTGACCCCAAACGACGACGTTCGACTCATTGGCGAGATCGATCCACTCACCGACTTTCCCGGATGGACAGCGGGACCGGAAGGCGGAGCAACAAGCCCCCGAAAAACGTTGGAATCGTCCACCTCAAGAGCACAGGTGGATAATGGGCTGGGGGGTGGGGGTTTCATAGGATTGAAGATCTCATCCTTCAGAGAAAGCAAGTCTGACGATCGGAAGTTTTACATATTTACTGCTACAAAGACCCTTCATTTAAGGACCAATTCAAAGAGCGAGCGGGCGGCTTGGCTACAAGCTTTGGTCTCAACTCGGAGTCTTTTTCCTCATAGATCCTTGAATGATAACCTCTCTCTTGTACCAACTGACTTATCTGTATCAACCGAAAGACTGAAAAAGCGCCTGCTTGAAGAAGGAACCGGTGAGGGCGTTGTACAGGATTGCGAGCAGATAATGCTCTCGGAATTCTCTCAATTACATGGACAGCTGAAGGCAGCCAATTATGAAGCTGAAGCCTCTGGAATTCATGATGGGGAATACCAATTGACGAAGCATGAGTTTTCCAGTTTGGGACAAGGAAAATATAGTGAGTGCAGCACAACTGAGTCATCTGACGATATTGAGAAACAAGAGCACGAGGAAGTGTCAGATGAAGACGAAATGCCATTTCATGATACACAAGAGTATTTCACTGAACCCATCATTAGTTGTGGGTCTATGAAAGGAGTGGTCACTAACAGTAATAAGAAAAGTGACGCTCAAAGTCAATCTAATAAAGGTGAGGAGACGCAAACTGAGAAGGAAGTTCACGATTATAAATACCCACATGTTGAAAGGAGAAAAGAGCTTCCCACTCCAGTTGAGAAGGAGAAGGGGGTCAGCCTTTGGTCTATGATTAAAGACAATGTGGGAAAGGATCTCACTCGAGTATGCCTTCCTGTGTACTTTAATGAGCCAATATCATCTCTTCAGAAGTGCTGTGAGGATTTGGAGTACTCGTATCTTTTGGACCGTGCATATGAGTATGGGAAAATGGGAAACAGTCTCCAAAGGGTTCTAAATGTTGCTGCATTTGCTGTTTCTGGATATGCATCATCTGTAGGGCGGCACTGCAAGCCATTCAATCCCTTGTTAGGGGAAACTTATGAAGCTGACTATCCTGATAAAGGAATTCGCTTCTTCTCCGAAAAGGTTAGTCACCATCCAACACTCATTGCCTGCCATTGTGAAGGTAGAGGGTGGAAGTTCTGGGCTGACAGCAATATCCGCACAAAATTTTGGGGGCGATCAATTCAGCTTGACCCTGTTGGAGTTCTGAGCTTGCAGTTTGACGATGGTGAAATTTTCCAGTGGAGCAAGGTCACAACAAGCATATATAATCTAATTCTTGGTAAAGTGTATTGTGATCACCATGGTACAATGCATATACGTGGTAATCGTCAGCATTCATGCAAACTGAAGTTCAAAGAGCAATCGATTCTTGACCGAAATCCTCACCAGGTCCATGGATTTGTGGAAGATGTCATGGGGAAAAAGGTTGCTACGTTATTTGGGAAGTGGGATGAAAGCATGCATTATGTTAATGGTGATGGGAGTGGCAAGTTAAATCCTTCAGATGCTTCGTTGTTGTGGAAAAGTAGTAAACCTCCTAATGTCACACGATACAACTTAACGTCATTCGCAATGACACTGAATGAGCTAACACCTGGACTGCAGGAGAAGCTCCCACCCACCGATTCCAGGCTCAGGCCAGACCAACGGCATCTGGAGAATGGAGAGTACGAAAAGGCAAATGCAGAGAAACAGCGGCTGGAAAAAAGGCAAAGAATGTCGAGGAAACTACAAGAAAACGGGTGGAAACCCAGGTGGTTCGAGAGAGAAGGTGAAGATGAACCTTTCCGCTATGTTGGTGGCTATTGGGAAACACGGAAGCAGGGAAAATGGGATGAATGCCCAGACATTTTTGGTGAATTTAACGAAGGCCTTGATGAGCAAACAGAAGGGTCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Oxysterol_BP PH_11

Protein Analysis

767

Amino Acids

86.54

Weight (kDa)

6.08

Isoelectric Point (pI)

46.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001060)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G12460 AT4G12460 AT4G12460 AT4G12460 AT4G12460 AT4G12460 AT4G12460 AT4G12460 AT4G12460 AT4G22540 AT4G22540 AT4G22540 AT4G22540 AT4G22540 AT4G22540
fragaria_vesca	FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160 FvH4_5g00160
malus_domestica	MD04G1086100.v1.1 MD06G1062300.v1.1
prunus_persica	Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1 Prupe.5G073700_v2.0.a1
pyrus_communis	pycom04g07760 pycom06g06180
rosa_chinensis	RchiOBHm_Chr2g0121881 RchiOBHm_Chr4g0403491 RchiOBHm_Chr7g0202721
rosa_laevigata	RLG00000003576
rosa_multiflora	Rmu_sc0002158.1_g000010
rosa_roxburghii	Rroxscaffold_3G00254340
rosa_rugosa	Rorug07G0072700 Rorug07G0072800 Rorug07G0072900
rosa_samantha	Rh2CG338500 Rh7AG200200 Rh7BG200800 Rh7CG211700
rosa_wichuraiana	Rw7G017520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1107
Acc36I	ACCTGC	1 cut(s)	115
AccBSI	CCGCTC	3 cut(s)	25, 82, 571
AccII	CGCG	2 cut(s)	50, 119
AclI	AACGTT	1 cut(s)	404
AclWI	GGATC	5 cut(s)	172, 219, 332, 618, 1215
AcoI	YGGCCR	1 cut(s)	114
AcsI	RAATTY	6 cut(s)	755, 813, 1461, 1565, 1632, 2261
AcuI	CTGAAG	6 cut(s)	469, 800, 822, 1244, 1769, 1887
AcyI	GRCGYC	1 cut(s)	252
AfaI	GTAC	6 cut(s)	651, 726, 1235, 1286, 1708, 2072
AfiI	CCNNNNNNNGG	9 cut(s)	70, 93, 153, 380, 1424, 1425, 1457, 2031, 2037
AflIII	ACRYGT	1 cut(s)	1117
AgeI	ACCGGT	1 cut(s)	710
AgsI	TTSAA	7 cut(s)	472, 561, 631, 701, 1124, 1414, 1756
AjnI	CCWGG	5 cut(s)	227, 1788, 1996, 2030, 2153
AluBI	AGCT	9 cut(s)	590, 778, 800, 1138, 1442, 1588, 1611, 1990, 2014
AluI	AGCT	9 cut(s)	590, 778, 800, 1138, 1442, 1588, 1611, 1990, 2014
Alw21I	GWGCWC	2 cut(s)	430, 927
Alw26I	GTCTC	4 cut(s)	59, 601, 1070, 1340
AlwI	GGATC	5 cut(s)	172, 219, 332, 618, 1215
AlwNI	CAGNNNCTG	1 cut(s)	2101
Ama87I	CYCGRG	2 cut(s)	41, 1215
AoxI	GGCC	4 cut(s)	114, 171, 2039, 2272
ApeKI	GCWGC	4 cut(s)	30, 785, 885, 1358
ApoI	RAATTY	6 cut(s)	755, 813, 1461, 1565, 1632, 2261
AsiGI	ACCGGT	1 cut(s)	710
AspLEI	GCGC	3 cut(s)	50, 124, 693
AspS9I	GGNCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
AsuC2I	CCSGG	3 cut(s)	88, 94, 357
AvaI	CYCGRG	2 cut(s)	41, 1215
AvaII	GGWCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
BauI	CACGAG	1 cut(s)	926
BbsI	GAAGAC	1 cut(s)	951
Bbv12I	GWGCWC	2 cut(s)	430, 927
BbvI	GCAGC	4 cut(s)	17, 797, 897, 1345
BccI	CCATC	6 cut(s)	354, 815, 998, 1500, 1619, 1874
BceAI	ACGGC	4 cut(s)	134, 154, 265, 2066
BcgI	CGANNNNNNTGC	2 cut(s)	22, 56
BciT130I	CCWGG	5 cut(s)	229, 1790, 1998, 2032, 2155
BclI	TGATCA	1 cut(s)	1696
BcnI	CCSGG	3 cut(s)	88, 94, 357
BcoDI	GTCTC	4 cut(s)	59, 601, 1070, 1340
BfmI	CTRYAG	2 cut(s)	1389, 2003
BfoI	RGCGCY	1 cut(s)	694
BfuAI	ACCTGC	1 cut(s)	115
BglI	GCCNNNNNGGC	1 cut(s)	155
BglII	AGATCT	1 cut(s)	474
BlpI	GCTNAGC	1 cut(s)	290
BmcAI	AGTACT	1 cut(s)	1286
Bme1390I	CCNGG	8 cut(s)	88, 94, 229, 357, 1790, 1998, 2032, 2155
Bme18I	GGWCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
BmeT110I	CYCGRG	2 cut(s)	41, 1215
BmgT120I	GGNCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
BmiI	GGNNCC	6 cut(s)	92, 98, 236, 372, 709, 2296
BmrFI	CCNGG	8 cut(s)	88, 94, 229, 357, 1790, 1998, 2032, 2155
BmsI	GCATC	6 cut(s)	6, 42, 167, 1391, 1897, 2062
BpiI	GAAGAC	1 cut(s)	951
BpmI	CTGGAG	2 cut(s)	1131, 2078
Bpu10I	CCTNAGC	1 cut(s)	2036
Bpu1102I	GCTNAGC	1 cut(s)	290
BpuEI	CTTGAG	1 cut(s)	406
BpuMI	CCSGG	3 cut(s)	88, 94, 357
Bsa29I	ATCGAT	2 cut(s)	336, 1766
BsaAI	YACGTR	1 cut(s)	1721
BsaBI	GATNNNNATC	1 cut(s)	1381
BsaHI	GRCGYC	1 cut(s)	252
BsaI	GGTCTC	2 cut(s)	59, 601
BsaJI	CCNNGG	4 cut(s)	117, 1702, 1795, 2153
BsaWI	WCCGGW	2 cut(s)	373, 710
BsaXI	ACNNNNNCTCC	2 cut(s)	1274, 1304
Bsc4I	CCNNNNNNNGG	9 cut(s)	70, 93, 153, 380, 1424, 1425, 1457, 2031, 2037
Bse118I	RCCGGY	1 cut(s)	710
Bse1I	ACTGG	4 cut(s)	64, 855, 1148, 1639
Bse3DI	GCAATG	3 cut(s)	148, 1503, 1980
Bse8I	GATNNNNATC	1 cut(s)	1381
BseBI	CCWGG	5 cut(s)	229, 1790, 1998, 2032, 2155
BseCI	ATCGAT	2 cut(s)	336, 1766
BseDI	CCNNGG	4 cut(s)	117, 1702, 1795, 2153
BseGI	GGATG	5 cut(s)	365, 479, 1492, 1858, 2242
BseJI	GATNNNNATC	1 cut(s)	1381
BseLI	CCNNNNNNNGG	9 cut(s)	70, 93, 153, 380, 1424, 1425, 1457, 2031, 2037
BseMI	GCAATG	3 cut(s)	148, 1503, 1980
BseMII	CTCAG	6 cut(s)	159, 281, 885, 1077, 1598, 2050
BseNI	ACTGG	4 cut(s)	64, 855, 1148, 1639
BseRI	GAGGAG	2 cut(s)	230, 1088
BseXI	GCAGC	4 cut(s)	17, 797, 897, 1345
BseYI	CCCAGC	1 cut(s)	445
BsgI	GTGCAG	1 cut(s)	904
Bsh1236I	CGCG	2 cut(s)	50, 119
Bsh1285I	CGRYCG	1 cut(s)	508
BshFI	GGCC	4 cut(s)	116, 173, 2041, 2274
BshTI	ACCGGT	1 cut(s)	710
BshVI	ATCGAT	2 cut(s)	336, 1766
BsiEI	CGRYCG	1 cut(s)	508
BsiHKAI	GWGCWC	2 cut(s)	430, 927
BsiHKCI	CYCGRG	2 cut(s)	41, 1215
BsiSI	CCGG	7 cut(s)	71, 88, 94, 183, 357, 374, 711
BslFI	GGGAC	2 cut(s)	384, 876
BslI	CCNNNNNNNGG	9 cut(s)	70, 93, 153, 380, 1424, 1425, 1457, 2031, 2037
BsmAI	GTCTC	4 cut(s)	59, 601, 1070, 1340
BsmBI	CGTCTC	1 cut(s)	1070
BsmFI	GGGAC	2 cut(s)	384, 876
BsmI	GAATGC	2 cut(s)	1735, 2246
BsnI	GGCC	4 cut(s)	116, 173, 2041, 2274
Bso31I	GGTCTC	2 cut(s)	59, 601
BsoBI	CYCGRG	2 cut(s)	41, 1215
Bsp1286I	GDGCHC	2 cut(s)	430, 927
Bsp1407I	TGTACA	1 cut(s)	724
Bsp1720I	GCTNAGC	1 cut(s)	290
Bsp19I	CCATGG	2 cut(s)	1702, 1795
BspANI	GGCC	4 cut(s)	116, 173, 2041, 2274
BspCNI	CTCAG	6 cut(s)	160, 282, 886, 1078, 1599, 2049
BspDI	ATCGAT	2 cut(s)	336, 1766
BspFNI	CGCG	2 cut(s)	50, 119
BspHI	TCATGA	2 cut(s)	817, 961
BspLI	GGNNCC	6 cut(s)	92, 98, 236, 372, 709, 2296
BspMAI	CTGCAG	1 cut(s)	2007
BspMI	ACCTGC	1 cut(s)	115
BspPI	GGATC	5 cut(s)	172, 219, 332, 618, 1215
BspTNI	GGTCTC	2 cut(s)	59, 601
BsrBI	CCGCTC	3 cut(s)	25, 82, 571
BsrDI	GCAATG	3 cut(s)	148, 1503, 1980
BsrFI	RCCGGY	1 cut(s)	710
BsrGI	TGTACA	1 cut(s)	724
BsrI	ACTGG	4 cut(s)	64, 855, 1148, 1639
BssAI	RCCGGY	1 cut(s)	710
BssECI	CCNNGG	4 cut(s)	117, 1702, 1795, 2153
BssNI	GRCGYC	1 cut(s)	252
BssSI	CACGAG	1 cut(s)	926
BssT1I	CCWWGG	2 cut(s)	1702, 1795
Bst2BI	CACGAG	1 cut(s)	926
Bst2UI	CCWGG	5 cut(s)	229, 1790, 1998, 2032, 2155
Bst4CI	ACNGT	4 cut(s)	178, 1031, 1304, 1334
Bst6I	CTCTTC	1 cut(s)	1263
BstACI	GRCGYC	1 cut(s)	252
BstAPI	GCANNNNNTGC	1 cut(s)	745
BstAUI	TGTACA	1 cut(s)	724
BstBAI	YACGTR	1 cut(s)	1721
BstC8I	GCNNGC	9 cut(s)	84, 569, 573, 695, 737, 1406, 1510, 1613, 1862
BstDEI	CTNAG	6 cut(s)	168, 290, 894, 1086, 1607, 2036
BstDSI	CCRYGG	3 cut(s)	117, 1702, 1795
BstEII	GGTNACC	1 cut(s)	59
BstENI	CCTNNNNNAGG	1 cut(s)	1455
BstF5I	GGATG	5 cut(s)	365, 479, 1492, 1858, 2242
BstFNI	CGCG	2 cut(s)	50, 119
BstH2I	RGCGCY	1 cut(s)	694
BstHHI	GCGC	3 cut(s)	50, 124, 693
BstMAI	GTCTC	4 cut(s)	59, 601, 1070, 1340
BstMCI	CGRYCG	1 cut(s)	508
BstMWI	GCNNNNNNNGC	9 cut(s)	76, 113, 155, 179, 745, 1364, 1405, 1557, 2011
BstNI	CCWGG	5 cut(s)	229, 1790, 1998, 2032, 2155
BstNSI	RCATGY	3 cut(s)	79, 1121, 1864
BstPI	GGTNACC	1 cut(s)	59
BstSCI	CCNGG	8 cut(s)	86, 92, 227, 355, 1788, 1996, 2030, 2153
BstSFI	CTRYAG	2 cut(s)	1389, 2003
BstUI	CGCG	2 cut(s)	50, 119
BstV1I	GCAGC	4 cut(s)	17, 797, 897, 1345
BstV2I	GAAGAC	1 cut(s)	951
BstX2I	RGATCY	5 cut(s)	164, 224, 474, 623, 1207
BstXI	CCANNNNNNTGG	1 cut(s)	1796
BstYI	RGATCY	5 cut(s)	164, 224, 474, 623, 1207
Bsu15I	ATCGAT	2 cut(s)	336, 1766
BsuRI	GGCC	4 cut(s)	116, 173, 2041, 2274
BsuTUI	ATCGAT	2 cut(s)	336, 1766
BtgI	CCRYGG	3 cut(s)	117, 1702, 1795
BtsCI	GGATG	5 cut(s)	365, 479, 1492, 1858, 2242
BtsI	GCAGTG	1 cut(s)	1399
BtsIMutI	CAGTG	4 cut(s)	981, 1399, 1646, 1979
BveI	ACCTGC	1 cut(s)	115
Cac8I	GCNNGC	9 cut(s)	84, 569, 573, 695, 737, 1406, 1510, 1613, 1862
CaiI	CAGNNNCTG	1 cut(s)	2101
CciI	TCATGA	2 cut(s)	817, 961
CfoI	GCGC	3 cut(s)	50, 124, 693
Cfr10I	RCCGGY	1 cut(s)	710
Cfr13I	GGNCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
Cfr42I	CCGCGG	1 cut(s)	120
ClaI	ATCGAT	2 cut(s)	336, 1766
CseI	GACGC	3 cut(s)	241, 1055, 1087
CsiI	ACCWGGT	1 cut(s)	1788
Csp6I	GTAC	6 cut(s)	650, 725, 1234, 1285, 1707, 2071
CspAI	ACCGGT	1 cut(s)	710
CspCI	CAANNNNNGTGG	2 cut(s)	1132, 1167
CviQI	GTAC	6 cut(s)	650, 725, 1234, 1285, 1707, 2071
DdeI	CTNAG	6 cut(s)	168, 290, 894, 1086, 1607, 2036
EaeI	YGGCCR	1 cut(s)	114
Eam1104I	CTCTTC	1 cut(s)	1263
EarI	CTCTTC	1 cut(s)	1263
EciI	GGCGGA	1 cut(s)	396
Eco130I	CCWWGG	2 cut(s)	1702, 1795
Eco147I	AGGCCT	1 cut(s)	2274
Eco31I	GGTCTC	2 cut(s)	59, 601
Eco47I	GGWCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
Eco57I	CTGAAG	6 cut(s)	469, 800, 822, 1244, 1769, 1887
Eco88I	CYCGRG	2 cut(s)	41, 1215
Eco91I	GGTNACC	1 cut(s)	59
EcoNI	CCTNNNNNAGG	1 cut(s)	1455
EcoO109I	RGGNCCY	1 cut(s)	2295
EcoO65I	GGTNACC	1 cut(s)	59
EcoRI	GAATTC	3 cut(s)	755, 813, 1461
EcoRII	CCWGG	5 cut(s)	227, 1788, 1996, 2030, 2153
EcoT14I	CCWWGG	2 cut(s)	1702, 1795
EcoT22I	ATGCAT	3 cut(s)	1384, 1716, 1866
ErhI	CCWWGG	2 cut(s)	1702, 1795
Esp3I	CGTCTC	1 cut(s)	1070
FaqI	GGGAC	2 cut(s)	384, 876
FauI	CCCGC	4 cut(s)	30, 43, 361, 564
FauNDI	CATATG	1 cut(s)	1309
FbaI	TGATCA	1 cut(s)	1696
FokI	GGATG	5 cut(s)	372, 466, 1479, 1865, 2249
GlaI	GCGC	3 cut(s)	49, 123, 692
GsaI	CCCAGC	1 cut(s)	449
GsuI	CTGGAG	2 cut(s)	1131, 2078
HaeII	RGCGCY	1 cut(s)	694
HaeIII	GGCC	4 cut(s)	116, 173, 2041, 2274
HapII	CCGG	7 cut(s)	71, 88, 94, 183, 357, 374, 711
HgaI	GACGC	3 cut(s)	241, 1055, 1087
HhaI	GCGC	3 cut(s)	50, 124, 693
Hin1I	GRCGYC	1 cut(s)	252
Hin6I	GCGC	3 cut(s)	48, 122, 691
HinP1I	GCGC	3 cut(s)	48, 122, 691
HincII	GTYRAC	1 cut(s)	300
HindII	GTYRAC	1 cut(s)	300
HindIII	AAGCTT	1 cut(s)	588
HinfI	GANTC	8 cut(s)	109, 186, 321, 410, 607, 896, 1768, 2027
HpaII	CCGG	7 cut(s)	71, 88, 94, 183, 357, 374, 711
Hpy166II	GTNNAC	6 cut(s)	201, 300, 417, 1099, 1234, 1934
Hpy8I	GTNNAC	6 cut(s)	201, 300, 417, 1099, 1234, 1934
Hpy99I	CGWCG	4 cut(s)	155, 279, 314, 317
HpyCH4III	ACNGT	4 cut(s)	178, 1031, 1304, 1334
HpyCH4IV	ACGT	5 cut(s)	315, 404, 1720, 1835, 1964
HpyF10VI	GCNNNNNNNGC	9 cut(s)	76, 113, 155, 179, 745, 1364, 1405, 1557, 2011
HpyF3I	CTNAG	6 cut(s)	168, 290, 894, 1086, 1607, 2036
HpySE526I	ACGT	5 cut(s)	315, 404, 1720, 1835, 1964
Hsp92I	GRCGYC	1 cut(s)	252
HspAI	GCGC	3 cut(s)	48, 122, 691
Ksp22I	TGATCA	1 cut(s)	1696
KspI	CCGCGG	1 cut(s)	120
LmnI	GCTCC	4 cut(s)	96, 383, 1644, 2019
Lsp1109I	GCAGC	4 cut(s)	17, 797, 897, 1345
LweI	GCATC	6 cut(s)	6, 42, 167, 1391, 1897, 2062
MabI	ACCWGGT	1 cut(s)	1788
MaeII	ACGT	5 cut(s)	315, 404, 1720, 1835, 1964
MaeIII	GTNAC	6 cut(s)	59, 1021, 1043, 1487, 1651, 1945
MbiI	CCGCTC	3 cut(s)	25, 82, 571
MboII	GAAGA	7 cut(s)	484, 713, 956, 1250, 1462, 1820, 2189
MfeI	CAATTG	1 cut(s)	833
MflI	RGATCY	5 cut(s)	164, 224, 474, 623, 1207
MhlI	GDGCHC	2 cut(s)	430, 927
MlyI	GAGTC	5 cut(s)	118, 195, 315, 616, 905
MmeI	TCCRAC	3 cut(s)	387, 1520, 1579
Mph1103I	ATGCAT	3 cut(s)	1384, 1716, 1866
MseI	TTAA	7 cut(s)	548, 1188, 1239, 1872, 1895, 1961, 2265
MslI	CAYNNNNRTG	1 cut(s)	1719
MspA1I	CMGCKG	4 cut(s)	119, 368, 778, 2098
MspI	CCGG	7 cut(s)	71, 88, 94, 183, 357, 374, 711
MspR9I	CCNGG	8 cut(s)	88, 94, 229, 357, 1790, 1998, 2032, 2155
MunI	CAATTG	1 cut(s)	833
Mva1269I	GAATGC	2 cut(s)	1735, 2246
MvaI	CCWGG	5 cut(s)	229, 1790, 1998, 2032, 2155
MvnI	CGCG	2 cut(s)	50, 119
MwoI	GCNNNNNNNGC	9 cut(s)	76, 113, 155, 179, 745, 1364, 1405, 1557, 2011
NciI	CCSGG	3 cut(s)	88, 94, 357
NcoI	CCATGG	2 cut(s)	1702, 1795
NdeI	CATATG	1 cut(s)	1309
NlaIV	GGNNCC	6 cut(s)	92, 98, 236, 372, 709, 2296
NmuCI	GTSAC	6 cut(s)	59, 1021, 1043, 1487, 1651, 1945
NsiI	ATGCAT	3 cut(s)	1384, 1716, 1866
NspI	RCATGY	3 cut(s)	79, 1121, 1864
PaeI	GCATGC	1 cut(s)	1864
PaeR7I	CTCGAG	2 cut(s)	41, 1215
PagI	TCATGA	2 cut(s)	817, 961
PceI	AGGCCT	1 cut(s)	2274
PciI	ACATGT	1 cut(s)	1117
PcsI	WCGNNNNNNNCGW	2 cut(s)	410, 1726
PctI	GAATGC	2 cut(s)	1735, 2246
PfeI	GAWTC	3 cut(s)	410, 1768, 2027
PfoI	TCCNGGA	1 cut(s)	355
PinAI	ACCGGT	1 cut(s)	710
Ple19I	CGATCG	1 cut(s)	508
PleI	GAGTC	5 cut(s)	117, 194, 315, 615, 904
PpsI	GAGTC	5 cut(s)	117, 194, 315, 615, 904
Ppu21I	YACGTR	1 cut(s)	1721
PpuMI	RGGWCCY	1 cut(s)	2295
PscI	ACATGT	1 cut(s)	1117
PsiI	TTATAA	1 cut(s)	1107
Psp1406I	AACGTT	1 cut(s)	404
Psp5II	RGGWCCY	1 cut(s)	2295
Psp6I	CCWGG	5 cut(s)	227, 1788, 1996, 2030, 2153
PspEI	GGTNACC	1 cut(s)	59
PspFI	CCCAGC	1 cut(s)	445
PspGI	CCWGG	5 cut(s)	227, 1788, 1996, 2030, 2153
PspN4I	GGNNCC	6 cut(s)	92, 98, 236, 372, 709, 2296
PspPI	GGNCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
PspPPI	RGGWCCY	1 cut(s)	2295
PspXI	VCTCGAGB	1 cut(s)	1215
PstI	CTGCAG	1 cut(s)	2007
PstNI	CAGNNNCTG	1 cut(s)	2101
PsuI	RGATCY	5 cut(s)	164, 224, 474, 623, 1207
PvuI	CGATCG	1 cut(s)	508
PvuII	CAGCTG	1 cut(s)	778
RsaI	GTAC	6 cut(s)	651, 726, 1235, 1286, 1708, 2072
RsaNI	GTAC	6 cut(s)	650, 725, 1234, 1285, 1707, 2071
RseI	CAYNNNNRTG	1 cut(s)	1719
SacII	CCGCGG	1 cut(s)	120
SaqAI	TTAA	7 cut(s)	548, 1188, 1239, 1872, 1895, 1961, 2265
Sau96I	GGNCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
ScaI	AGTACT	1 cut(s)	1286
SchI	GAGTC	5 cut(s)	118, 195, 315, 616, 905
ScrFI	CCNGG	8 cut(s)	88, 94, 229, 357, 1790, 1998, 2032, 2155
SduI	GDGCHC	2 cut(s)	430, 927
SexAI	ACCWGGT	1 cut(s)	1788
SfaNI	GCATC	6 cut(s)	6, 42, 167, 1391, 1897, 2062
SfcI	CTRYAG	2 cut(s)	1389, 2003
Sfr274I	CTCGAG	2 cut(s)	41, 1215
Sfr303I	CCGCGG	1 cut(s)	120
SgrBI	CCGCGG	1 cut(s)	120
SinI	GGWCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
SlaI	CTCGAG	2 cut(s)	41, 1215
SmiMI	CAYNNNNRTG	1 cut(s)	1719
SmlI	CTYRAG	3 cut(s)	41, 421, 1215
SmoI	CTYRAG	3 cut(s)	41, 421, 1215
SphI	GCATGC	1 cut(s)	1864
SseBI	AGGCCT	1 cut(s)	2274
StuI	AGGCCT	1 cut(s)	2274
StyD4I	CCNGG	8 cut(s)	86, 92, 227, 355, 1788, 1996, 2030, 2153
StyI	CCWWGG	2 cut(s)	1702, 1795
TaaI	ACNGT	4 cut(s)	178, 1031, 1304, 1334
TaiI	ACGT	5 cut(s)	318, 407, 1723, 1838, 1967
TaqI	TCGA	7 cut(s)	42, 319, 336, 1216, 1766, 2123, 2163
TaqII	GACCGA	1 cut(s)	1791
TatI	WGTACW	3 cut(s)	724, 1233, 1284
TauI	GCSGC	7 cut(s)	82, 119, 122, 149, 578, 1399, 2101
TfiI	GAWTC	3 cut(s)	410, 1768, 2027
Tru1I	TTAA	7 cut(s)	548, 1188, 1239, 1872, 1895, 1961, 2265
Tru9I	TTAA	7 cut(s)	548, 1188, 1239, 1872, 1895, 1961, 2265
TscAI	CASTG	4 cut(s)	988, 1406, 1646, 1986
TseFI	GTSAC	6 cut(s)	59, 1021, 1043, 1487, 1651, 1945
TseI	GCWGC	4 cut(s)	30, 785, 885, 1358
Tsp45I	GTSAC	6 cut(s)	59, 1021, 1043, 1487, 1651, 1945
TspGWI	ACGGA	1 cut(s)	2233
TspRI	CASTG	4 cut(s)	988, 1406, 1646, 1986
VpaK11BI	GGWCC	7 cut(s)	90, 127, 371, 552, 1300, 1792, 2295
XagI	CCTNNNNNAGG	1 cut(s)	1455
XapI	RAATTY	6 cut(s)	755, 813, 1461, 1565, 1632, 2261
XceI	RCATGY	3 cut(s)	79, 1121, 1864
XhoI	CTCGAG	2 cut(s)	41, 1215
ZrmI	AGTACT	1 cut(s)	1286
Zsp2I	ATGCAT	3 cut(s)	1384, 1716, 1866

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.