Rorug07G0072700

Oxysterol-binding protein-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0001060
Physical Location & Seq
Reverse (-)
5561782 .. 5565292
3511 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0072700.1

Sequence Viewer

Length: 1659 bp
ATGGCGATCGCCGCACCTCCGTCCACTCCGACCTTCTCCGCCTCCTTCCGCCCCACTCGCACCCACTCGCCTCCCTCCTTCACGCGCTTCCCTTCCATCTTCTCCCACATCAACAAGCCTCACCCCACCCCTGCTCGCCGCCTCACCCTCTCCGCCCGCCTCAACTCCTCCGTCTCGCCGGACAACGGCGACCTCCAGGGCGAGCTCTTCCACGGATTCTCCCCCCAGCGCCGCGGCAGGGGATCGCCGGTCTTCGTCACCATGCCGGTCGACTCGGTCGACCCGCTCAACGGCCAGGTGCGCCGCCGCAAGACGATGAGCCAGTCGTTCAAGGCGCTGGTCGCAGCCGGAGTCGACGGCGTGGTGATGGAGGTGTGGTGGGGAATCGTGGAGAGGGATCAGCCTGGGCTTTACAATTGGCGGGGCTACCTGGCGATTGTGGAGCTAGCGAAACGGTGCGGATTGAAGGTCCGGGCCGTCCTGGGGTTTCATCAGTGCGGCACTGGCCAAGGGGACCCTCATTGGATTCCCCTTCCTCTGTGGGTACTTGATGAGATTGATAAAGATCCAGATTTAGCATATTCTGATAGATTTGGAAGAAGAAATACGGAATACATTTCACTCGGGTGTGACAGCCTTCCTGTCTTGCGAGGGCGTTCACCACTCCAAGCATATGCAGATTTTATGAGAAGCTTCAGAGACACTTTTAAACATTTCATTGGTGTCATCATAATAGGAATTCAAATTGGAATGGGTCCTGCTGGTGAATTAAGATATCCTTCTTGCCCTACTCAGAAGCTAACATCAGCTTGGCGGACTCGTGAGCTAGGAGAGTTTCAGTGCTATGATAAGTATATGCTCGCATCTCTTAATGCACGTGCTAGGGAGATCGGTATGCCTGAATGGGGAAATGGGGGCCCTATTGGTGCTTCCAATTTGATGCAGAACCCTGAAGAAACAAAGTTTTTCAGAAGTGATAATGGGTCGTGGAACACATCTTATGGTACATTTTTTCTTGAATGGTATTCAGGAATGCTGCTTTTGCATGGAGAAAGGCTATGCAGGGAAGCTGAGGCCATTTTTTGGGGTACAAAAGCTAATACGTCAGCAAAAGTAGCTGGGTTGCACTGGCATTATCTCTCTCAGTCTCATCCATCAGAGTTGACAGCTGGTTATTACAACACATCAACAAGAGATGGATATTTGCCAATTGCTCGCATGTTTGCTAGGTATGGGTTTAGTTTGTGCTGCCCATGTTTTGACTTGCAAGATCTGGATGAGAAGCAGATGAATCCAGTTAGTAGCCCGGAAGGTTTTCTCAGACAACTTCTCTCAGCTGCTAGGGTGTGTGACATACCTGTAGAGGGTGAACCTTCTGCAGCCAGTTTGGATGATAAATCGTTCCAGCAGGTGGTGAAGATGTCAAAGTATTACTCCTATGGTCTAGAAAAGCCCTCCTTCTCGTTCAACTTTGTGAGGATGGATAAGAATATGTTTGAGTTGCATAATTGGGTTCGCTTTACTCGTTTTGTGAGGCAAATGTCGGATGTCAATATTTTTCGAGCCAAGCTAGATGTTGATGCAATGGCAGATTCACGTCGGTTTTCCACTTCCGTTTCAGATGTTGCAAAATTCGGAATGGCTTCTGCATATTGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oxysterol_BP PH_11

Protein Analysis

552

Amino Acids

62.2

Weight (kDa)

8.92

Isoelectric Point (pI)

45.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_14 PF01373 85 - 509 5.9e-117 Glycosyl hydrolase family 14
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1399
Acc36I ACCTGC 1 cut(s) 1399
AccB7I CCANNNNNTGG 2 cut(s) 1083, 1411
AccBSI CCGCTC 1 cut(s) 286
AccI GTMKAC 3 cut(s) 270, 279, 354
AccII CGCG 2 cut(s) 85, 234
AclWI GGATC 3 cut(s) 250, 405, 560
AcoI YGGCCR 2 cut(s) 292, 505
AcsI RAATTY 2 cut(s) 738, 1631
AcuI CTGAAG 2 cut(s) 679, 972
AcvI CACGTG 1 cut(s) 878
AfaI GTAC 3 cut(s) 546, 1006, 1090
AfiI CCNNNNNNNGG 8 cut(s) 185, 238, 290, 483, 905, 1083, 1364, 1411
AgsI TTSAA 5 cut(s) 331, 466, 743, 1019, 1468
AjiI CACGTC 1 cut(s) 1598
AjnI CCWGG 5 cut(s) 195, 294, 403, 429, 480
AleI CACNNNNGTG 1 cut(s) 625
Alw21I GWGCWC 1 cut(s) 207
Alw26I GTCTC 3 cut(s) 178, 693, 1152
AlwI GGATC 3 cut(s) 250, 405, 560
Ama87I CYCGRG 1 cut(s) 623
AoxI GGCC 5 cut(s) 292, 474, 505, 916, 1074
ApaI GGGCCC 1 cut(s) 920
ApeKI GCWGC 5 cut(s) 344, 1036, 1248, 1337, 1379
ApoI RAATTY 2 cut(s) 738, 1631
AsiSI GCGATCGC 1 cut(s) 9
Asp700I GAANNNNTTC 2 cut(s) 1314, 1642
AspLEI GCGC 4 cut(s) 87, 231, 303, 337
AspS9I GGNCC 6 cut(s) 469, 474, 514, 755, 916, 917
AsuC2I CCSGG 2 cut(s) 473, 1307
AsuHPI GGTGA 8 cut(s) 113, 136, 250, 376, 651, 776, 1379, 1426
AsuNHI GCTAGC 1 cut(s) 445
AvaI CYCGRG 1 cut(s) 623
AvaII GGWCC 3 cut(s) 469, 514, 755
BaeGI GKGCMC 1 cut(s) 920
BalI TGGCCA 1 cut(s) 507
BanII GRGCYC 2 cut(s) 207, 920
BarI GAAGNNNNNNTAC 2 cut(s) 589, 621
BauI CACGAG 1 cut(s) 819
BbrPI CACGTG 1 cut(s) 878
BbsI GAAGAC 1 cut(s) 244
Bbv12I GWGCWC 1 cut(s) 207
BbvCI CCTCAGC 1 cut(s) 1071
BbvI GCAGC 5 cut(s) 356, 1023, 1235, 1324, 1391
BccI CCATC 5 cut(s) 104, 361, 1162, 1190, 1474
BceAI ACGGC 4 cut(s) 202, 307, 373, 461
BciT130I CCWGG 5 cut(s) 197, 296, 405, 431, 482
BcnI CCSGG 2 cut(s) 473, 1307
BcoDI GTCTC 3 cut(s) 178, 693, 1152
BfaI CTAG 7 cut(s) 446, 827, 882, 1227, 1341, 1445, 1571
BfmI CTRYAG 2 cut(s) 1359, 1377
BfoI RGCGCY 2 cut(s) 232, 338
BfuAI ACCTGC 1 cut(s) 1399
BglII AGATCT 1 cut(s) 1270
Bme1390I CCNGG 7 cut(s) 197, 296, 405, 431, 473, 482, 1307
Bme18I GGWCC 3 cut(s) 469, 514, 755
BmeT110I CYCGRG 1 cut(s) 623
BmgBI CACGTC 1 cut(s) 1598
BmgT120I GGNCC 6 cut(s) 469, 474, 514, 755, 916, 917
BmiI GGNNCC 5 cut(s) 515, 516, 756, 917, 918
BmrFI CCNGG 7 cut(s) 197, 296, 405, 431, 473, 482, 1307
BmsI GCATC 3 cut(s) 872, 930, 1570
BmtI GCTAGC 1 cut(s) 449
BpiI GAAGAC 1 cut(s) 244
BpmI CTGGAG 1 cut(s) 179
Bpu10I CCTNAGC 1 cut(s) 1071
BpuMI CCSGG 2 cut(s) 473, 1307
BsaAI YACGTR 1 cut(s) 878
BsaBI GATNNNNATC 1 cut(s) 564
BsaJI CCNNGG 6 cut(s) 196, 211, 232, 404, 481, 508
BsaXI ACNNNNNCTCC 4 cut(s) 203, 233, 362, 392
Bsc4I CCNNNNNNNGG 8 cut(s) 185, 238, 290, 483, 905, 1083, 1364, 1411
Bse118I RCCGGY 2 cut(s) 247, 265
Bse1I ACTGG 5 cut(s) 322, 508, 1133, 1295, 1383
Bse3DI GCAATG 1 cut(s) 1590
Bse8I GATNNNNATC 1 cut(s) 564
BseBI CCWGG 5 cut(s) 197, 296, 405, 431, 482
BseDI CCNNGG 6 cut(s) 196, 211, 232, 404, 481, 508
BseGI GGATG 5 cut(s) 1150, 1282, 1396, 1485, 1552
BseJI GATNNNNATC 1 cut(s) 564
BseLI CCNNNNNNNGG 8 cut(s) 185, 238, 290, 483, 905, 1083, 1364, 1411
BseMI GCAATG 1 cut(s) 1590
BseMII CTCAG 5 cut(s) 806, 1062, 1157, 1333, 1347
BseNI ACTGG 5 cut(s) 322, 508, 1133, 1295, 1383
BseRI GAGGAG 1 cut(s) 157
BseSI GKGCMC 1 cut(s) 920
BseXI GCAGC 5 cut(s) 356, 1023, 1235, 1324, 1391
BseYI CCCAGC 2 cut(s) 225, 1118
Bsh1236I CGCG 2 cut(s) 85, 234
Bsh1285I CGRYCG 3 cut(s) 9, 270, 279
BshFI GGCC 5 cut(s) 294, 476, 507, 918, 1076
BsiEI CGRYCG 3 cut(s) 9, 270, 279
BsiHKAI GWGCWC 1 cut(s) 207
BsiHKCI CYCGRG 1 cut(s) 623
BsiSI CCGG 6 cut(s) 179, 248, 266, 348, 472, 1307
BslFI GGGAC 1 cut(s) 527
BslI CCNNNNNNNGG 8 cut(s) 185, 238, 290, 483, 905, 1083, 1364, 1411
BsmAI GTCTC 3 cut(s) 178, 693, 1152
BsmBI CGTCTC 1 cut(s) 178
BsmFI GGGAC 1 cut(s) 527
BsmI GAATGC 1 cut(s) 1038
BsnI GGCC 5 cut(s) 294, 476, 507, 918, 1076
BsoBI CYCGRG 1 cut(s) 623
Bsp120I GGGCCC 1 cut(s) 916
Bsp1286I GDGCHC 2 cut(s) 207, 920
Bsp143I GATC 6 cut(s) 6, 242, 397, 565, 888, 1270
BspANI GGCC 5 cut(s) 294, 476, 507, 918, 1076
BspCNI CTCAG 5 cut(s) 805, 1063, 1156, 1332, 1346
BspFNI CGCG 2 cut(s) 85, 234
BspLI GGNNCC 5 cut(s) 515, 516, 756, 917, 918
BspMAI CTGCAG 1 cut(s) 1381
BspMI ACCTGC 1 cut(s) 1399
BspOI GCTAGC 1 cut(s) 449
BspPI GGATC 3 cut(s) 250, 405, 560
BspQI GCTCTTC 1 cut(s) 212
BsrBI CCGCTC 1 cut(s) 286
BsrDI GCAATG 1 cut(s) 1590
BsrFI RCCGGY 2 cut(s) 247, 265
BsrI ACTGG 5 cut(s) 322, 508, 1133, 1295, 1383
BssAI RCCGGY 2 cut(s) 247, 265
BssECI CCNNGG 6 cut(s) 196, 211, 232, 404, 481, 508
BssMI GATC 6 cut(s) 6, 242, 397, 565, 888, 1270
BssSI CACGAG 1 cut(s) 819
BssT1I CCWWGG 1 cut(s) 508
Bst2BI CACGAG 1 cut(s) 819
Bst2UI CCWGG 5 cut(s) 197, 296, 405, 431, 482
Bst4CI ACNGT 1 cut(s) 456
Bst6I CTCTTC 1 cut(s) 212
BstBAI YACGTR 1 cut(s) 878
BstC8I GCNNGC 6 cut(s) 136, 157, 203, 447, 861, 1216
BstDEI CTNAG 5 cut(s) 792, 1071, 1143, 1319, 1333
BstDSI CCRYGG 2 cut(s) 211, 232
BstF5I GGATG 5 cut(s) 1150, 1282, 1396, 1485, 1552
BstFNI CGCG 2 cut(s) 85, 234
BstH2I RGCGCY 2 cut(s) 232, 338
BstHHI GCGC 4 cut(s) 87, 231, 303, 337
BstKTI GATC 6 cut(s) 9, 245, 400, 568, 891, 1273
BstMAI GTCTC 3 cut(s) 178, 693, 1152
BstMBI GATC 6 cut(s) 6, 242, 397, 565, 888, 1270
BstMCI CGRYCG 3 cut(s) 9, 270, 279
BstMWI GCNNNNNNNGC 7 cut(s) 11, 57, 300, 341, 504, 1042, 1115
BstNI CCWGG 5 cut(s) 197, 296, 405, 431, 482
BstNSI RCATGY 1 cut(s) 1222
BstSCI CCNGG 7 cut(s) 195, 294, 403, 429, 471, 480, 1305
BstSFI CTRYAG 2 cut(s) 1359, 1377
BstSLI GKGCMC 1 cut(s) 920
BstUI CGCG 2 cut(s) 85, 234
BstV1I GCAGC 5 cut(s) 356, 1023, 1235, 1324, 1391
BstV2I GAAGAC 1 cut(s) 244
BstX2I RGATCY 2 cut(s) 565, 1270
BstYI RGATCY 2 cut(s) 565, 1270
BsuRI GGCC 5 cut(s) 294, 476, 507, 918, 1076
BtgI CCRYGG 2 cut(s) 211, 232
BtrI CACGTC 1 cut(s) 1598
BtsCI GGATG 5 cut(s) 1150, 1282, 1396, 1485, 1552
BtsIMutI CAGTG 4 cut(s) 500, 501, 845, 1126
BveI ACCTGC 1 cut(s) 1399
Cac8I GCNNGC 6 cut(s) 136, 157, 203, 447, 861, 1216
CfoI GCGC 4 cut(s) 87, 231, 303, 337
Cfr10I RCCGGY 2 cut(s) 247, 265
Cfr13I GGNCC 6 cut(s) 469, 474, 514, 755, 916, 917
Cfr42I CCGCGG 1 cut(s) 235
Csp6I GTAC 3 cut(s) 545, 1005, 1089
CviAII CATG 4 cut(s) 262, 1046, 1219, 1254
CviQI GTAC 3 cut(s) 545, 1005, 1089
DdeI CTNAG 5 cut(s) 792, 1071, 1143, 1319, 1333
DpnI GATC 6 cut(s) 8, 244, 399, 567, 890, 1272
DpnII GATC 6 cut(s) 6, 242, 397, 565, 888, 1270
DraI TTTAAA 1 cut(s) 709
EaeI YGGCCR 2 cut(s) 292, 505
Eam1104I CTCTTC 1 cut(s) 212
EarI CTCTTC 1 cut(s) 212
EciI GGCGGA 4 cut(s) 28, 38, 142, 829
Ecl136II GAGCTC 1 cut(s) 205
Eco130I CCWWGG 1 cut(s) 508
Eco24I GRGCYC 2 cut(s) 207, 920
Eco32I GATATC 1 cut(s) 776
Eco47I GGWCC 3 cut(s) 469, 514, 755
Eco53kI GAGCTC 1 cut(s) 205
Eco57I CTGAAG 2 cut(s) 679, 972
Eco72I CACGTG 1 cut(s) 878
Eco88I CYCGRG 1 cut(s) 623
EcoICRI GAGCTC 1 cut(s) 205
EcoO109I RGGNCCY 4 cut(s) 514, 755, 916, 917
EcoRI GAATTC 1 cut(s) 738
EcoRII CCWGG 5 cut(s) 195, 294, 403, 429, 480
EcoRV GATATC 1 cut(s) 776
EcoT14I CCWWGG 1 cut(s) 508
EcoT38I GRGCYC 2 cut(s) 207, 920
ErhI CCWWGG 1 cut(s) 508
Esp3I CGTCTC 1 cut(s) 178
FaeI CATG 4 cut(s) 265, 1049, 1222, 1257
FalI AAGNNNNNCTT 4 cut(s) 763, 795, 1442, 1474
FaqI GGGAC 1 cut(s) 527
FatI CATG 4 cut(s) 261, 1045, 1218, 1253
FauI CCCGC 3 cut(s) 164, 291, 414
FauNDI CATATG 1 cut(s) 673
FblI GTMKAC 3 cut(s) 270, 279, 354
FokI GGATG 5 cut(s) 1137, 1289, 1403, 1492, 1559
FriOI GRGCYC 2 cut(s) 207, 920
FspBI CTAG 7 cut(s) 446, 827, 882, 1227, 1341, 1445, 1571
GlaI GCGC 4 cut(s) 86, 230, 302, 336
GsaI CCCAGC 2 cut(s) 229, 1122
GsuI CTGGAG 1 cut(s) 179
HaeII RGCGCY 2 cut(s) 232, 338
HaeIII GGCC 5 cut(s) 294, 476, 507, 918, 1076
HapII CCGG 6 cut(s) 179, 248, 266, 348, 472, 1307
HhaI GCGC 4 cut(s) 87, 231, 303, 337
Hin1II CATG 4 cut(s) 265, 1049, 1222, 1257
Hin6I GCGC 4 cut(s) 85, 229, 301, 335
HinP1I GCGC 4 cut(s) 85, 229, 301, 335
HincII GTYRAC 4 cut(s) 271, 280, 355, 1164
HindII GTYRAC 4 cut(s) 271, 280, 355, 1164
HindIII AAGCTT 1 cut(s) 691
HinfI GANTC 8 cut(s) 216, 272, 351, 384, 526, 817, 1291, 1592
HpaII CCGG 6 cut(s) 179, 248, 266, 348, 472, 1307
HphI GGTGA 8 cut(s) 113, 136, 250, 376, 651, 776, 1379, 1426
Hpy166II GTNNAC 7 cut(s) 24, 271, 280, 355, 659, 1164, 1370
Hpy188III TCNNGA 6 cut(s) 569, 821, 1016, 1029, 1274, 1445
Hpy8I GTNNAC 7 cut(s) 24, 271, 280, 355, 659, 1164, 1370
Hpy99I CGWCG 2 cut(s) 359, 1602
HpyCH4III ACNGT 1 cut(s) 456
HpyCH4IV ACGT 3 cut(s) 877, 1103, 1597
HpyF10VI GCNNNNNNNGC 7 cut(s) 11, 57, 300, 341, 504, 1042, 1115
HpyF3I CTNAG 5 cut(s) 792, 1071, 1143, 1319, 1333
HpySE526I ACGT 3 cut(s) 877, 1103, 1597
Hsp92II CATG 4 cut(s) 265, 1049, 1222, 1257
HspAI GCGC 4 cut(s) 85, 229, 301, 335
KflI GGGWCCC 1 cut(s) 514
KspI CCGCGG 1 cut(s) 235
Kzo9I GATC 6 cut(s) 6, 242, 397, 565, 888, 1270
LguI GCTCTTC 1 cut(s) 212
LmnI GCTCC 1 cut(s) 442
Lsp1109I GCAGC 5 cut(s) 356, 1023, 1235, 1324, 1391
LweI GCATC 3 cut(s) 872, 930, 1570
MaeI CTAG 7 cut(s) 446, 827, 882, 1227, 1341, 1445, 1571
MaeII ACGT 3 cut(s) 877, 1103, 1597
MaeIII GTNAC 3 cut(s) 256, 629, 1349
MalI GATC 6 cut(s) 8, 244, 399, 567, 890, 1272
MbiI CCGCTC 1 cut(s) 286
MboI GATC 6 cut(s) 6, 242, 397, 565, 888, 1270
MboII GAAGA 7 cut(s) 91, 199, 244, 609, 612, 965, 1429
MfeI CAATTG 2 cut(s) 415, 1209
MflI RGATCY 2 cut(s) 565, 1270
MhlI GDGCHC 2 cut(s) 207, 920
MlsI TGGCCA 1 cut(s) 507
MluCI AATT 8 cut(s) 415, 738, 744, 767, 934, 1209, 1507, 1631
MluNI TGGCCA 1 cut(s) 507
MlyI GAGTC 3 cut(s) 266, 360, 811
MmeI TCCRAC 2 cut(s) 53, 1524
Mox20I TGGCCA 1 cut(s) 507
MroXI GAANNNNTTC 2 cut(s) 1314, 1642
MscI TGGCCA 1 cut(s) 507
MseI TTAA 3 cut(s) 708, 770, 870
MslI CAYNNNNRTG 1 cut(s) 625
Msp20I TGGCCA 1 cut(s) 507
MspA1I CMGCKG 3 cut(s) 234, 1169, 1337
MspI CCGG 6 cut(s) 179, 248, 266, 348, 472, 1307
MspR9I CCNGG 7 cut(s) 197, 296, 405, 431, 473, 482, 1307
MunI CAATTG 2 cut(s) 415, 1209
Mva1269I GAATGC 1 cut(s) 1038
MvaI CCWGG 5 cut(s) 197, 296, 405, 431, 482
MvnI CGCG 2 cut(s) 85, 234
MwoI GCNNNNNNNGC 7 cut(s) 11, 57, 300, 341, 504, 1042, 1115
NciI CCSGG 2 cut(s) 473, 1307
NdeI CATATG 1 cut(s) 673
NdeII GATC 6 cut(s) 6, 242, 397, 565, 888, 1270
NheI GCTAGC 1 cut(s) 445
NlaIII CATG 4 cut(s) 265, 1049, 1222, 1257
NlaIV GGNNCC 5 cut(s) 515, 516, 756, 917, 918
NmuCI GTSAC 3 cut(s) 256, 629, 1349
NspI RCATGY 1 cut(s) 1222
OliI CACNNNNGTG 1 cut(s) 625
PaqCI CACCTGC 1 cut(s) 1399
PciSI GCTCTTC 1 cut(s) 212
PcsI WCGNNNNNNNCGW 2 cut(s) 276, 1522
PctI GAATGC 1 cut(s) 1038
PdmI GAANNNNTTC 2 cut(s) 1314, 1642
PfeI GAWTC 5 cut(s) 216, 384, 526, 1291, 1592
PflFI GACNNNGTC 1 cut(s) 275
PflMI CCANNNNNTGG 2 cut(s) 1083, 1411
Ple19I CGATCG 1 cut(s) 9
PleI GAGTC 3 cut(s) 266, 359, 811
PmaCI CACGTG 1 cut(s) 878
PmlI CACGTG 1 cut(s) 878
PpsI GAGTC 3 cut(s) 266, 359, 811
Ppu21I YACGTR 1 cut(s) 878
PpuMI RGGWCCY 2 cut(s) 514, 755
Psp124BI GAGCTC 1 cut(s) 207
Psp5II RGGWCCY 2 cut(s) 514, 755
Psp6I CCWGG 5 cut(s) 195, 294, 403, 429, 480
PspCI CACGTG 1 cut(s) 878
PspFI CCCAGC 2 cut(s) 225, 1118
PspGI CCWGG 5 cut(s) 195, 294, 403, 429, 480
PspN4I GGNNCC 5 cut(s) 515, 516, 756, 917, 918
PspOMI GGGCCC 1 cut(s) 916
PspPI GGNCC 6 cut(s) 469, 474, 514, 755, 916, 917
PspPPI RGGWCCY 2 cut(s) 514, 755
PstI CTGCAG 1 cut(s) 1381
PsuI RGATCY 2 cut(s) 565, 1270
PsyI GACNNNGTC 1 cut(s) 275
PvuI CGATCG 1 cut(s) 9
PvuII CAGCTG 2 cut(s) 1169, 1337
RgaI GCGATCGC 1 cut(s) 9
RsaI GTAC 3 cut(s) 546, 1006, 1090
RsaNI GTAC 3 cut(s) 545, 1005, 1089
RseI CAYNNNNRTG 1 cut(s) 625
SacI GAGCTC 1 cut(s) 207
SacII CCGCGG 1 cut(s) 235
SalI GTCGAC 3 cut(s) 269, 278, 353
SapI GCTCTTC 1 cut(s) 212
SaqAI TTAA 3 cut(s) 708, 770, 870
Sau3AI GATC 6 cut(s) 6, 242, 397, 565, 888, 1270
Sau96I GGNCC 6 cut(s) 469, 474, 514, 755, 916, 917
SchI GAGTC 3 cut(s) 266, 360, 811
ScrFI CCNGG 7 cut(s) 197, 296, 405, 431, 473, 482, 1307
SduI GDGCHC 2 cut(s) 207, 920
SfaAI GCGATCGC 1 cut(s) 9
SfaNI GCATC 3 cut(s) 872, 930, 1570
SfcI CTRYAG 2 cut(s) 1359, 1377
Sfr303I CCGCGG 1 cut(s) 235
SgfI GCGATCGC 1 cut(s) 9
SgrBI CCGCGG 1 cut(s) 235
SinI GGWCC 3 cut(s) 469, 514, 755
SmiMI CAYNNNNRTG 1 cut(s) 625
Sse9I AATT 8 cut(s) 415, 738, 744, 767, 934, 1209, 1507, 1631
SspI AATATT 1 cut(s) 1555
SspMI CTAG 7 cut(s) 446, 827, 882, 1227, 1341, 1445, 1571
SstI GAGCTC 1 cut(s) 207
StyD4I CCNGG 7 cut(s) 195, 294, 403, 429, 471, 480, 1305
StyI CCWWGG 1 cut(s) 508
TaaI ACNGT 1 cut(s) 456
TaiI ACGT 3 cut(s) 880, 1106, 1600
TaqI TCGA 4 cut(s) 270, 279, 354, 1561
TaqII GACCGA 1 cut(s) 265
TasI AATT 8 cut(s) 415, 738, 744, 767, 934, 1209, 1507, 1631
TauI GCSGC 7 cut(s) 14, 141, 234, 237, 306, 309, 501
TfiI GAWTC 5 cut(s) 216, 384, 526, 1291, 1592
Tru1I TTAA 3 cut(s) 708, 770, 870
Tru9I TTAA 3 cut(s) 708, 770, 870
TscAI CASTG 4 cut(s) 500, 508, 845, 1133
TseFI GTSAC 3 cut(s) 256, 629, 1349
TseI GCWGC 5 cut(s) 344, 1036, 1248, 1337, 1379
Tsp45I GTSAC 3 cut(s) 256, 629, 1349
TspDTI ATGAA 3 cut(s) 479, 706, 1304
TspGWI ACGGA 5 cut(s) 9, 160, 228, 623, 1603
TspRI CASTG 4 cut(s) 500, 508, 845, 1133
Tth111I GACNNNGTC 1 cut(s) 275
Van91I CCANNNNNTGG 2 cut(s) 1083, 1411
VpaK11BI GGWCC 3 cut(s) 469, 514, 755
XapI RAATTY 2 cut(s) 738, 1631
XbaI TCTAGA 1 cut(s) 1444
XceI RCATGY 1 cut(s) 1222
XmiI GTMKAC 3 cut(s) 270, 279, 354
XmnI GAANNNNTTC 2 cut(s) 1314, 1642
XspI CTAG 7 cut(s) 446, 827, 882, 1227, 1341, 1445, 1571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.