Rroxscaffold_3G00254340

Oxysterol-binding protein-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0001060
Physical Location & Seq
Reverse (-)
48489137 .. 48498063
8927 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00254340.1

Sequence Viewer

Length: 1980 bp
ATGCGAGTGAAGGAGATGCACCCGCTCTGCTGTATAACGCTGGAGAGCGCCGGCATCGGCGACCAGTCGCCTGACGCGTCGTCGCTGTCGAGGACGCGGAGCTTGCCGGCGAGTCTGGCGACGGCTTCGCTCGGATCTGCCGGCAATGCAGGACGGCAGGCGGGATCTGAGGCCACCGTCGCCGGAGTTCTCCACAAGTGGACCAATTACGGCAAGGGATGGAGATCCAGGTGGTTCCTGCTGCGAAACGGCGTCCTCTCCTACGCCAAGATTCGGCTGCCGGAGAATCTCAACCTCCTGAACCCAAACGACGACGTTCACGTCATCGGCGAGATCTCGACTCGGACCACGCTCCGGCTTTCGAGGATTGACAGCGGGAGTATCGGGCGACGGAAGCACCAGAAAACCGTTGGAATCGTCCACCTCAAGCAGATTTCATCCTTCAGAGAAAGCAAGTCGGATGATCGGAAGTTTTACATATTTACTGCTACAAAGACTCTTCATTTAAGGACTAATTCAAAGAGAGACCGGGCGGCTTGGTTGCAAGCTTTGGCGTCAACCCGGAGTCTATTTCCACTGAGATCGTTGAATGATAATCTCTCTCTTGTACAAACGGATTTATCTATATCTACTGACAGACTAAAGAGCCGCCTACTTGAAGAGGGAACCAGTGAGAACACTGTGAAGGATTGTGAGCAGATAATGCTCTCTGAATTCTCTCAATTACAAGGACAGCTCAAGGTTCTGTGCAAAGAACGGTCCAATTTGTTCGACACATTAAGACAGTTGGAGGCAGCTAACTTTGAAGCTGAAGCCTCTGGAATTCACGATGGTGAATACCAACTGACGAAGCATGAGTTTTCCAGTTTGCGGCAGGGAAAATATAGTGAATGCAGCACAACTGAATCATCTGACGATATTGAGAAACAGGAGCTCGAGGAAGTGTCAGACGAAGATGAATTGTCATTTTTTGACACAAAAGAGTATTTTACTGAACCAAACATAAGTTGCGGGTCCGTGCAAGTTGTAAATAACACAAATAAGATCAACAAACCTCGAAGTCAATTTAGTAATGTTGAGGAGATGCACACAGAAAAGGAAATTAATGATGTTAGATATCCACACATTGAAAGGAGAAAAGAGCTTCCTGTTCCAGTTGAGAAGGAGAAAGGAGTCAGCCTTTGGTCCATGATTAAAGACAATGTGGGAAAGGATCTCACTCGAGTTTGTCTCCCTGTGTATTTTAATGAGCCAATATCATCTCTTCAGAAGTGTTGTGAGGACATGGAGTACTCGTATCTTTTGGATCGGGCATATGAGTATGGAAAAATGGGGAATAGTCTCCAAAGGATTCTAAATGTTGCTGCATTTGCGGTTTCTGGTTATGCATCATCGGAAGGGCGGCACTGTAAGCCATTCAATCCTTTGTTAGGTGAAACTTATGAAGCCGACTATCCAGATAAAGGAATTCGCTTCTTCTCTGAAAAGCAATCTCCGGTCAAAATTTTGGGGCGATCAATTCAGCTTGACCCTGTTGGAGTTCTAAGCGTGGAGTTTGATGATGGCGAAATTTTCCAGTGGAGCAAGGTCCATGGATTTGTTGAAGATGTCGTGGGGAAAAAGGTTGCCACGCTATTTGGGAAGTGGGATGACAGCATGTATTATGTTAATGGTGATGTGGGTGGAAAGCCAAATCCATCAGATGCTTCCTTATTGTGGAAAGGAAGTAAACCCCCTAATATCACACGGTACAACTTAACATCGTTCGCTATCACACTGAACGAGCTAACACCTGGACTGCAGTCGAGGAAATTACAAGAAAATGGGTGGAAACCCAAATGGTTTGAGAGAGAGGGTGAAGATGGACCTTTCCGCTATGTTGGGGGCTATTGGGAATCACGGAAACAGGGTAAATGGGATGAGTGCCCAAACATTTTTGGTGAATTTGATGAAGGCCTTGATACATTAGAAGGGTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Oxysterol_BP PH_11

Protein Analysis

659

Amino Acids

74.45

Weight (kDa)

5.89

Isoelectric Point (pI)

49.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PH PF00169 61 - 186 5.2e-09 PH domain
PH_11 PF15413 66 - 185 3.7e-08 Pleckstrin homology domain
Oxysterol_BP PF01237 393 - 496 1.4e-40 Oxysterol-binding protein
Oxysterol_BP PF01237 518 - 599 1.2e-09 Oxysterol-binding protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 320
AccBSI CCGCTC 1 cut(s) 25
AccII CGCG 2 cut(s) 77, 97
AclWI GGATC 5 cut(s) 142, 172, 219, 1221, 1314
AcsI RAATTY 6 cut(s) 713, 822, 1467, 1503, 1569, 1943
AcuI CTGAAG 3 cut(s) 427, 831, 1250
AcyI GRCGYC 2 cut(s) 252, 554
AfaI GTAC 3 cut(s) 609, 1292, 1751
AfiI CCNNNNNNNGG 6 cut(s) 273, 354, 870, 1430, 1463, 1716
AflIII ACRYGT 1 cut(s) 75
AgsI TTSAA 7 cut(s) 519, 589, 659, 806, 1130, 1420, 1604
AhdI GACNNNNNGTC 1 cut(s) 79
AjiI CACGTC 1 cut(s) 322
AjnI CCWGG 2 cut(s) 227, 1792
AleI CACNNNNGTG 1 cut(s) 831
AluBI AGCT 9 cut(s) 102, 548, 736, 797, 809, 934, 1144, 1525, 1786
AluI AGCT 9 cut(s) 102, 548, 736, 797, 809, 934, 1144, 1525, 1786
Alw21I GWGCWC 1 cut(s) 936
Alw26I GTCTC 3 cut(s) 519, 1235, 1346
AlwI GGATC 5 cut(s) 142, 172, 219, 1221, 1314
Ama87I CYCGRG 2 cut(s) 935, 1221
AoxI GGCC 2 cut(s) 171, 1954
ApeKI GCWGC 5 cut(s) 241, 277, 794, 894, 1364
ApoI RAATTY 6 cut(s) 713, 822, 1467, 1503, 1569, 1943
AseI ATTAAT 1 cut(s) 1104
AspLEI GCGC 1 cut(s) 50
AspS9I GGNCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
AsuC2I CCSGG 2 cut(s) 530, 562
AsuHPI GGTGA 5 cut(s) 845, 1445, 1685, 1868, 1952
AvaI CYCGRG 2 cut(s) 935, 1221
AvaII GGWCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
BaeGI GKGCMC 1 cut(s) 1928
BanII GRGCYC 1 cut(s) 936
Bbv12I GWGCWC 1 cut(s) 936
BbvI GCAGC 5 cut(s) 228, 264, 806, 906, 1351
BccI CCATC 5 cut(s) 213, 824, 1556, 1705, 1856
BceAI ACGGC 4 cut(s) 138, 170, 226, 265
BciT130I CCWGG 2 cut(s) 229, 1794
BcnI CCSGG 2 cut(s) 530, 562
BcoDI GTCTC 3 cut(s) 519, 1235, 1346
BfmI CTRYAG 1 cut(s) 1799
BfoI RGCGCY 1 cut(s) 51
BglII AGATCT 1 cut(s) 333
BisI GCNGC 9 cut(s) 242, 278, 534, 649, 795, 872, 895, 1365, 1403
BlsI GCNGC 9 cut(s) 243, 279, 535, 650, 796, 873, 896, 1366, 1404
BmcAI AGTACT 1 cut(s) 1292
Bme1390I CCNGG 4 cut(s) 229, 530, 562, 1794
Bme18I GGWCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
BmeRI GACNNNNNGTC 1 cut(s) 79
BmeT110I CYCGRG 2 cut(s) 935, 1221
BmgBI CACGTC 1 cut(s) 322
BmgT120I GGNCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
BmiI GGNNCC 3 cut(s) 236, 667, 1015
BmrFI CCNGG 4 cut(s) 229, 530, 562, 1794
BmsI GCATC 5 cut(s) 6, 63, 1074, 1397, 1693
BoxI GACNNNNGTC 1 cut(s) 1801
BplI GAGNNNNNCTC 2 cut(s) 1215, 1247
BpmI CTGGAG 1 cut(s) 62
BpuEI CTTGAG 2 cut(s) 410, 722
BpuMI CCSGG 2 cut(s) 530, 562
BsaBI GATNNNNATC 1 cut(s) 223
BsaHI GRCGYC 2 cut(s) 252, 554
BsaI GGTCTC 1 cut(s) 519
BsaJI CCNNGG 1 cut(s) 1591
BsaWI WCCGGW 1 cut(s) 1495
BsaXI ACNNNNNCTCC 2 cut(s) 1280, 1310
Bsc4I CCNNNNNNNGG 6 cut(s) 273, 354, 870, 1430, 1463, 1716
Bse118I RCCGGY 3 cut(s) 50, 106, 140
Bse1I ACTGG 5 cut(s) 64, 669, 864, 1154, 1576
Bse3DI GCAATG 1 cut(s) 151
Bse8I GATNNNNATC 1 cut(s) 223
BseBI CCWGG 2 cut(s) 229, 1794
BseDI CCNNGG 1 cut(s) 1591
BseGI GGATG 5 cut(s) 224, 437, 466, 1654, 1924
BseJI GATNNNNATC 1 cut(s) 223
BseLI CCNNNNNNNGG 6 cut(s) 273, 354, 870, 1430, 1463, 1716
BseMI GCAATG 1 cut(s) 151
BseMII CTCAG 2 cut(s) 159, 569
BseNI ACTGG 5 cut(s) 64, 669, 864, 1154, 1576
BseRI GAGGAG 1 cut(s) 1094
BseSI GKGCMC 1 cut(s) 1928
BseXI GCAGC 5 cut(s) 228, 264, 806, 906, 1351
Bsh1236I CGCG 2 cut(s) 77, 97
BshFI GGCC 2 cut(s) 173, 1956
BsiHKAI GWGCWC 1 cut(s) 936
BsiHKCI CYCGRG 2 cut(s) 935, 1221
BsiSI CCGG 9 cut(s) 51, 107, 141, 183, 281, 355, 529, 562, 1496
BslI CCNNNNNNNGG 6 cut(s) 273, 354, 870, 1430, 1463, 1716
BsmAI GTCTC 3 cut(s) 519, 1235, 1346
BsmI GAATGC 1 cut(s) 896
BsnI GGCC 2 cut(s) 173, 1956
Bso31I GGTCTC 1 cut(s) 519
BsoBI CYCGRG 2 cut(s) 935, 1221
Bsp1286I GDGCHC 2 cut(s) 936, 1928
Bsp1407I TGTACA 1 cut(s) 607
Bsp19I CCATGG 1 cut(s) 1591
BspANI GGCC 2 cut(s) 173, 1956
BspCNI CTCAG 2 cut(s) 160, 570
BspFNI CGCG 2 cut(s) 77, 97
BspLI GGNNCC 3 cut(s) 236, 667, 1015
BspMAI CTGCAG 1 cut(s) 1803
BspPI GGATC 5 cut(s) 142, 172, 219, 1221, 1314
BspTNI GGTCTC 1 cut(s) 519
BsrBI CCGCTC 1 cut(s) 25
BsrDI GCAATG 1 cut(s) 151
BsrFI RCCGGY 3 cut(s) 50, 106, 140
BsrGI TGTACA 1 cut(s) 607
BsrI ACTGG 5 cut(s) 64, 669, 864, 1154, 1576
BssAI RCCGGY 3 cut(s) 50, 106, 140
BssECI CCNNGG 1 cut(s) 1591
BssNI GRCGYC 2 cut(s) 252, 554
BssT1I CCWWGG 1 cut(s) 1591
Bst2UI CCWGG 2 cut(s) 229, 1794
Bst4CI ACNGT 7 cut(s) 178, 409, 682, 759, 786, 1409, 1749
Bst6I CTCTTC 3 cut(s) 504, 654, 1269
BstACI GRCGYC 2 cut(s) 252, 554
BstAPI GCANNNNNTGC 1 cut(s) 703
BstAUI TGTACA 1 cut(s) 607
BstC8I GCNNGC 6 cut(s) 52, 104, 108, 142, 159, 546
BstDEI CTNAG 3 cut(s) 168, 578, 1544
BstDSI CCRYGG 1 cut(s) 1591
BstENI CCTNNNNNAGG 1 cut(s) 1428
BstF5I GGATG 5 cut(s) 224, 437, 466, 1654, 1924
BstFNI CGCG 2 cut(s) 77, 97
BstH2I RGCGCY 1 cut(s) 51
BstHHI GCGC 1 cut(s) 50
BstMAI GTCTC 3 cut(s) 519, 1235, 1346
BstMWI GCNNNNNNNGC 8 cut(s) 103, 116, 146, 179, 394, 703, 1370, 1411
BstNI CCWGG 2 cut(s) 229, 1794
BstNSI RCATGY 1 cut(s) 1660
BstPAI GACNNNNGTC 1 cut(s) 1801
BstSCI CCNGG 4 cut(s) 227, 528, 560, 1792
BstSFI CTRYAG 1 cut(s) 1799
BstSLI GKGCMC 1 cut(s) 1928
BstUI CGCG 2 cut(s) 77, 97
BstV1I GCAGC 5 cut(s) 228, 264, 806, 906, 1351
BstX2I RGATCY 5 cut(s) 134, 164, 224, 333, 1213
BstYI RGATCY 5 cut(s) 134, 164, 224, 333, 1213
BsuRI GGCC 2 cut(s) 173, 1956
BtgI CCRYGG 1 cut(s) 1591
BtrI CACGTC 1 cut(s) 322
BtsCI GGATG 5 cut(s) 224, 437, 466, 1654, 1924
BtsIMutI CAGTG 6 cut(s) 575, 676, 678, 1405, 1583, 1775
Cac8I GCNNGC 6 cut(s) 52, 104, 108, 142, 159, 546
CfoI GCGC 1 cut(s) 50
Cfr10I RCCGGY 3 cut(s) 50, 106, 140
Cfr13I GGNCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
CseI GACGC 5 cut(s) 66, 83, 103, 241, 543
Csp6I GTAC 3 cut(s) 608, 1291, 1750
CspCI CAANNNNNGTGG 2 cut(s) 1618, 1653
CviAII CATG 5 cut(s) 854, 1189, 1285, 1592, 1657
CviQI GTAC 3 cut(s) 608, 1291, 1750
DdeI CTNAG 3 cut(s) 168, 578, 1544
DrdI GACNNNNNNGTC 1 cut(s) 320
DriI GACNNNNNGTC 1 cut(s) 79
DseDI GACNNNNNNGTC 1 cut(s) 320
Eam1104I CTCTTC 3 cut(s) 504, 654, 1269
Eam1105I GACNNNNNGTC 1 cut(s) 79
EarI CTCTTC 3 cut(s) 504, 654, 1269
Ecl136II GAGCTC 1 cut(s) 934
Eco130I CCWWGG 1 cut(s) 1591
Eco147I AGGCCT 1 cut(s) 1956
Eco24I GRGCYC 1 cut(s) 936
Eco31I GGTCTC 1 cut(s) 519
Eco32I GATATC 1 cut(s) 1118
Eco47I GGWCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
Eco53kI GAGCTC 1 cut(s) 934
Eco57I CTGAAG 3 cut(s) 427, 831, 1250
Eco88I CYCGRG 2 cut(s) 935, 1221
EcoICRI GAGCTC 1 cut(s) 934
EcoNI CCTNNNNNAGG 1 cut(s) 1428
EcoRI GAATTC 3 cut(s) 713, 822, 1467
EcoRII CCWGG 2 cut(s) 227, 1792
EcoRV GATATC 1 cut(s) 1118
EcoT14I CCWWGG 1 cut(s) 1591
EcoT22I ATGCAT 1 cut(s) 1390
EcoT38I GRGCYC 1 cut(s) 936
ErhI CCWWGG 1 cut(s) 1591
FaeI CATG 5 cut(s) 857, 1192, 1288, 1595, 1660
FatI CATG 5 cut(s) 853, 1188, 1284, 1591, 1656
FauI CCCGC 4 cut(s) 30, 154, 368, 1004
FauNDI CATATG 1 cut(s) 1315
Fnu4HI GCNGC 9 cut(s) 242, 278, 534, 649, 795, 872, 895, 1365, 1403
FokI GGATG 5 cut(s) 231, 424, 473, 1661, 1931
FriOI GRGCYC 1 cut(s) 936
Fsp4HI GCNGC 9 cut(s) 242, 278, 534, 649, 795, 872, 895, 1365, 1403
GlaI GCGC 1 cut(s) 49
GluI GCNGC 9 cut(s) 242, 278, 534, 649, 795, 872, 895, 1365, 1403
GsuI CTGGAG 1 cut(s) 62
HaeII RGCGCY 1 cut(s) 51
HaeIII GGCC 2 cut(s) 173, 1956
HapII CCGG 9 cut(s) 51, 107, 141, 183, 281, 355, 529, 562, 1496
HgaI GACGC 5 cut(s) 66, 83, 103, 241, 543
HhaI GCGC 1 cut(s) 50
Hin1I GRCGYC 2 cut(s) 252, 554
Hin1II CATG 5 cut(s) 857, 1192, 1288, 1595, 1660
Hin6I GCGC 1 cut(s) 48
HinP1I GCGC 1 cut(s) 48
HincII GTYRAC 1 cut(s) 558
HindII GTYRAC 1 cut(s) 558
HindIII AAGCTT 1 cut(s) 546
HpaII CCGG 9 cut(s) 51, 107, 141, 183, 281, 355, 529, 562, 1496
HphI GGTGA 5 cut(s) 845, 1445, 1685, 1868, 1952
Hpy166II GTNNAC 5 cut(s) 201, 319, 421, 558, 1730
Hpy188III TCNNGA 5 cut(s) 298, 337, 819, 827, 1457
Hpy8I GTNNAC 5 cut(s) 201, 319, 421, 558, 1730
Hpy99I CGWCG 7 cut(s) 82, 85, 124, 182, 314, 317, 393
HpyAV CCTTC 7 cut(s) 4, 451, 679, 1156, 1391, 1946, 1964
HpyCH4III ACNGT 7 cut(s) 178, 409, 682, 759, 786, 1409, 1749
HpyCH4IV ACGT 2 cut(s) 315, 321
HpyF10VI GCNNNNNNNGC 8 cut(s) 103, 116, 146, 179, 394, 703, 1370, 1411
HpyF3I CTNAG 3 cut(s) 168, 578, 1544
HpySE526I ACGT 2 cut(s) 315, 321
Hsp92I GRCGYC 2 cut(s) 252, 554
Hsp92II CATG 5 cut(s) 857, 1192, 1288, 1595, 1660
HspAI GCGC 1 cut(s) 48
KroI GCCGGC 3 cut(s) 50, 106, 140
KroNI GCCGGC 3 cut(s) 52, 108, 142
LmnI GCTCC 4 cut(s) 99, 357, 931, 1581
Lsp1109I GCAGC 5 cut(s) 228, 264, 806, 906, 1351
LweI GCATC 5 cut(s) 6, 63, 1074, 1397, 1693
MaeII ACGT 2 cut(s) 315, 321
MbiI CCGCTC 1 cut(s) 25
MboII GAAGA 7 cut(s) 491, 671, 965, 1256, 1468, 1616, 1871
MflI RGATCY 5 cut(s) 134, 164, 224, 333, 1213
MhlI GDGCHC 2 cut(s) 936, 1928
MluI ACGCGT 1 cut(s) 75
MlyI GAGTC 5 cut(s) 121, 334, 490, 574, 1182
MmeI TCCRAC 4 cut(s) 391, 438, 768, 1516
Mph1103I ATGCAT 1 cut(s) 1390
MroNI GCCGGC 3 cut(s) 50, 106, 140
MseI TTAA 7 cut(s) 506, 779, 1104, 1194, 1245, 1668, 1757
MslI CAYNNNNRTG 1 cut(s) 831
MspA1I CMGCKG 1 cut(s) 375
MspI CCGG 9 cut(s) 51, 107, 141, 183, 281, 355, 529, 562, 1496
MspR9I CCNGG 4 cut(s) 229, 530, 562, 1794
Mva1269I GAATGC 1 cut(s) 896
MvaI CCWGG 2 cut(s) 229, 1794
MvnI CGCG 2 cut(s) 77, 97
MwoI GCNNNNNNNGC 8 cut(s) 103, 116, 146, 179, 394, 703, 1370, 1411
NaeI GCCGGC 3 cut(s) 52, 108, 142
NciI CCSGG 2 cut(s) 530, 562
NcoI CCATGG 1 cut(s) 1591
NdeI CATATG 1 cut(s) 1315
NgoMIV GCCGGC 3 cut(s) 50, 106, 140
NlaIII CATG 5 cut(s) 857, 1192, 1288, 1595, 1660
NlaIV GGNNCC 3 cut(s) 236, 667, 1015
NsiI ATGCAT 1 cut(s) 1390
NspI RCATGY 1 cut(s) 1660
OliI CACNNNNGTG 1 cut(s) 831
PaeR7I CTCGAG 2 cut(s) 935, 1221
PceI AGGCCT 1 cut(s) 1956
PcsI WCGNNNNNNNCGW 4 cut(s) 74, 86, 318, 327
PctI GAATGC 1 cut(s) 896
PdiI GCCGGC 3 cut(s) 52, 108, 142
PfeI GAWTC 6 cut(s) 271, 286, 414, 905, 1351, 1895
PkrI GCNGC 9 cut(s) 243, 279, 535, 650, 796, 873, 896, 1366, 1404
PleI GAGTC 5 cut(s) 120, 334, 490, 573, 1181
PpsI GAGTC 5 cut(s) 120, 334, 490, 573, 1181
PshAI GACNNNNGTC 1 cut(s) 1801
PshBI ATTAAT 1 cut(s) 1104
Psp124BI GAGCTC 1 cut(s) 936
Psp6I CCWGG 2 cut(s) 227, 1792
PspGI CCWGG 2 cut(s) 227, 1792
PspN4I GGNNCC 3 cut(s) 236, 667, 1015
PspPI GGNCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
PspXI VCTCGAGB 2 cut(s) 935, 1221
PstI CTGCAG 1 cut(s) 1803
PsuI RGATCY 5 cut(s) 134, 164, 224, 333, 1213
RsaI GTAC 3 cut(s) 609, 1292, 1751
RsaNI GTAC 3 cut(s) 608, 1291, 1750
RseI CAYNNNNRTG 1 cut(s) 831
SacI GAGCTC 1 cut(s) 936
SaqAI TTAA 7 cut(s) 506, 779, 1104, 1194, 1245, 1668, 1757
SatI GCNGC 9 cut(s) 242, 278, 534, 649, 795, 872, 895, 1365, 1403
Sau96I GGNCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
ScaI AGTACT 1 cut(s) 1292
SchI GAGTC 5 cut(s) 121, 334, 490, 574, 1182
ScrFI CCNGG 4 cut(s) 229, 530, 562, 1794
SduI GDGCHC 2 cut(s) 936, 1928
SfaNI GCATC 5 cut(s) 6, 63, 1074, 1397, 1693
SfcI CTRYAG 1 cut(s) 1799
Sfr274I CTCGAG 2 cut(s) 935, 1221
SinI GGWCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
SlaI CTCGAG 2 cut(s) 935, 1221
SmiMI CAYNNNNRTG 1 cut(s) 831
SmlI CTYRAG 4 cut(s) 425, 737, 935, 1221
SmoI CTYRAG 4 cut(s) 425, 737, 935, 1221
SseBI AGGCCT 1 cut(s) 1956
SstI GAGCTC 1 cut(s) 936
StuI AGGCCT 1 cut(s) 1956
StyD4I CCNGG 4 cut(s) 227, 528, 560, 1792
StyI CCWWGG 1 cut(s) 1591
TaaI ACNGT 7 cut(s) 178, 409, 682, 759, 786, 1409, 1749
TaiI ACGT 2 cut(s) 318, 324
TaqI TCGA 8 cut(s) 89, 338, 362, 771, 936, 1057, 1222, 1805
TatI WGTACW 2 cut(s) 607, 1290
TauI GCSGC 4 cut(s) 536, 651, 874, 1405
TfiI GAWTC 6 cut(s) 271, 286, 414, 905, 1351, 1895
Tru1I TTAA 7 cut(s) 506, 779, 1104, 1194, 1245, 1668, 1757
Tru9I TTAA 7 cut(s) 506, 779, 1104, 1194, 1245, 1668, 1757
TscAI CASTG 6 cut(s) 582, 676, 685, 1412, 1583, 1782
TseI GCWGC 5 cut(s) 241, 277, 794, 894, 1364
TspDTI ATGAA 5 cut(s) 426, 491, 972, 1458, 1965
TspGWI ACGGA 4 cut(s) 406, 629, 1006, 1915
TspRI CASTG 6 cut(s) 582, 676, 685, 1412, 1583, 1782
VpaK11BI GGWCC 7 cut(s) 201, 345, 759, 1014, 1185, 1588, 1865
VspI ATTAAT 1 cut(s) 1104
XagI CCTNNNNNAGG 1 cut(s) 1428
XapI RAATTY 6 cut(s) 713, 822, 1467, 1503, 1569, 1943
XceI RCATGY 1 cut(s) 1660
XcmI CCANNNNNNNNNTGG 1 cut(s) 407
XhoI CTCGAG 2 cut(s) 935, 1221
ZrmI AGTACT 1 cut(s) 1292
Zsp2I ATGCAT 1 cut(s) 1390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.