Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0003847

Physical Location & Seq

Genomic Coordinates Reverse (-)

13413339 .. 13421559

Gene Structure 8221 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g08300.19

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2946 bp

ATGGCTCGGTTGGTTCTGCCATGCAAGTGCTCTGCTTTTGTGAGAACCAGTCTTTTGGGTTTGATCTCATCTGCTCCTCTTCAGTGTACCAGTCGTGTTAGATTGTTGGGGAATTCAGTCAAAAGGCTTTCCAGATACAAGCGCTTTCTTACTTTGGAGGCCACGTGTTCAAGGAATTATCGCTTTCCATATACTGCATTACCTAGGGACAAACAAGGGAGCAGGAGGCTAATCTGTTCAGTTGCCACAGAAAGCTTGCCAGATCAAGTTGACGAATCCAAAATGGCTGCACCAAAAGAAATATTTTTGAAGGATTACAAAATGCCTGACTACTACTTTGACTCGGTGGATTTGGACTTTTCGCTGGGTGAGGAGAAAACAATTGTTGGTTCAAAAATATGTGTCTTCCCCAGGGTTGAAGGATCTTCTTCCCCATTGGTTCTGGATGGAACAGATCTTAAATTACTCTCAGTTCGGATCAACGGCAAGGATTTAAAGGAGGAGGATTACAACTTGGATTCACGCCATTTGACACTAAAATCGCTACCTAGCGGGGCATTTACTTTGGAAATTTTAACAGAGATGTATCCCCAGAAGAACACATCATTAGAGGGACTTTACAAGTCATCCGGGAATTTCTGCACCCAGTGTGAAGCTGAGGGTTTTCGTAAAATTACATTCTATCAGGACCGTCCTGATATAATGGCAAAGTATACATGCCGCATTGAAGCTGATAAATCGTTATACCCAGTGTTGTTGTCCAATGGAAATCTCAGAGAGCAGGGAGACCTAGAGGGTAATAGACATTATGCTCTTTGGGTGGATCCCTTCAAGAAACCCTGCTACTTGTTTGCTTTGGTTGCTGGACAGCTCGAGAGCAGAGATGACACATTTATTACTCATTCAGGTCGAAAAGTGGCTTTGAGGATTTGGACCCCTGCTCAAGATGTAGCAAAAACAGCACATGCCATGTATTCACTTAAGGCTGCTATGAAATGGGATGAGGATGTTTTTGGTCTCGAGTATGATCTGGATCTCTTCAACATTGTGGCTGTTCCAGATTTTAACATGGGAGCTATGGAAAACAAGAGTTTGAATATATTCAATTCCAAACTTGTCTTGGCATCTCCAGAAACTGCTTCCGATGCAGACTATGCAGCCATCTTGGGTGTTATTGGCCATGAGTATTTCCATAACTGGACTGGCAACAGAGTGACATGTCGTGATTGGTTTCAACTTAGCCTGAAGGAGGGTCTAACTGTTTTCCGTGATCAGGAATTTTCATCTGATATGGGGAGTCGCCCTGTAAAGCGGATTTCTGATGTTTCCAAACTTAGAAATTATCAGTTTCCACAGGATGCTGGCCCCATGGCTCATCCCGTGCGGCCACATTCTTACATCAAGATGGATAACTTCTATACAGTGACGGTGTATGAAAAGGGAGCTGAAGTAGTCAGAATGTACAAAACCTTACTTGGAAGTCAAGGTTTCCGAAATGGCATGGATCTTTACTTCAAGAGACATGATGGACAAGCTGTAACCTGTGAAGACTTTTATGCTGCCATGCGAGATGCTAATAATGCAGATTTTGCTAATTTCTTATTATGGTACTCCCAAGCTGGGACCCCAATTGTTAAAGTTGCATCCTCTTATAATGCTGAGGCCCGTACTTTTTCTTTGAAGTTTAGTCAAGAGGTGCCACCAACTCCAGGGCAACCCATTAAAGAACCCATGTTCATTCCCGTGGCAGTAGGTTTACTTGACTCAACTGGCAAGGAGGTGCCTCTGTCCTCTGTGCATCATGATGGGATAGTGCAGTCTATTGCTAACAATGGTCAGCCAGTCTACACCACAGTTCTTAGAGTAACAAAGAAAGAAGAAGAGTTCATCTTCTCTGATGTATCCGAACGACCGATTCCATCTCTGCTCCGGGGCTATAGTGCACCTATTCGTCTGGAAACCGATCTCACAGATAGTGATCTCTTTTTACTCCTTGCTTATGATTCCGACAAATTCAACCGCTGGGAGGCTGGACAAGTGCTGGCACGTAAGCTGATGCTTAATTTGGTTGCTGATTTCCAACAAAACAAACCTTTGGTTTTGAATCCGAAGTTTGTGCTTGGGCTCAGAAGCATACTGTCCGACTTAAGCTTGGATAAAGAATTTGTGGCAAAGGCAATAAGTCTCCCCGGTGAAGGAGAAATAATGGACATGATGGAAGTTGCAGATCCTGATGCTGTTCATGCTGTTCGTTCTTTTATCAGGAAGCAGCTAGCCCATGAACTGAAAGCAGAGCTTCTGAGCACAGTTGAAAACAACAGGAGCTCAGAAGAGTATGTGTTTGACCACCCCAATTTGTCCAGGCGTGCTCTTAAGAATATTGCTCTTGCATATCTTGCATCGCTCGAGGATTCAAAGTGTACTGAGCTTGTGCTAAATGAGTACAAGACTGCCACAAACATGACTGAGCAGTTTGCAGCTTTGGCAGCCTTAGCACAAAACCCTGGTAAAACTCGTGATGATATTCTGGCCGACTTCTATGGCAAATGGAAGGAGGACTATTTGGTTTTGAATAAATGGTTTCAACTTCAAGCCATGTCAAACATTCCTGGCAATGTTGAGAATGTGCGGAACCTCTTAAGCCACCCTGCATTTGACTTGCGCAATCCAAACAAGGTGTACTCACTCATTGGAGGTTTCTGTGGCTCTCCTGTTAATTTCCATGCAAACGATGGGTCAGGCTACAAGTTTTTGGGAGAAATTGTGATGCAATTAGATCAAATAAACCCTCAGGTGGCCTCCCGCATGGTGTCAGCCTTCTCCAGGTGGAGGCGCTATGATGAAACCCGGCAAAACCTTGCCAAAGCACAACTGGAGAAGATATTGTCTGCCAATGGACTGTCAGAAAACGTGTTTGAGATCGCGTCCAAGAGTTTGGCCGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009987 GO:0016020 GO:0016787 GO:0019538 GO:0033218 GO:0034641 GO:0042277 GO:0042802 GO:0043167 GO:0043169 GO:0043170 GO:0043171 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0070006 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00480 ko01100 map00480 map01100

Pfam Domains

Protein Families

DUF3458 DUF3458_C Peptidase_M1

Protein Analysis

982

Amino Acids

110.5

Weight (kDa)

6.31

Isoelectric Point (pI)

41.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003847)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63770 AT1G63770 AT1G63770 AT1G63770 AT1G63770 AT1G63770 AT1G63770
fragaria_vesca	FvH4_5g02730 FvH4_5g02730 FvH4_5g02730 FvH4_5g02730 FvH4_5g02730 FvH4_5g02730
malus_domestica	MD06G1086400.v1.1 MD14G1107600.v1.1
prunus_persica	Prupe.5G103000_v2.0.a1 Prupe.5G103000_v2.0.a1 Prupe.5G103100_v2.0.a1
pyrus_communis	pycom06g08300 pycom14g10260
rosa_chinensis	RchiOBHm_Chr7g0197201
rosa_laevigata	RLG00000003953
rosa_multiflora	Rmu_co8293827.1_g000001 Rmu_co8437137.1_g000001 Rmu_ssc0000465.1_g000015 Rmu_ssc0000465.1_g000016
rosa_roxburghii	Rroxscaffold_3G00258600
rosa_rugosa	Rorug07G0038500.1 Rorug07G0038600
rosa_samantha	Rh7AG163200 Rh7BG165200 Rh7CG171200 Rh7DG164600
rosa_wichuraiana	Rw7G014250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1653
Acc16I	TGCGCA	1 cut(s)	2663
AccB1I	GGYRCC	2 cut(s)	1696, 1780
AccI	GTMKAC	2 cut(s)	713, 1845
AccII	CGCG	1 cut(s)	2924
AciI	CCGC	8 cut(s)	552, 721, 1312, 1384, 2020, 2629, 2803, 2940
AclWI	GGATC	7 cut(s)	430, 485, 818, 831, 1041, 1512, 2222
AcoI	YGGCCR	4 cut(s)	1177, 1385, 2529, 2937
AcsI	RAATTY	6 cut(s)	112, 570, 634, 1277, 2012, 2162
AcuI	CTGAAG	3 cut(s)	65, 1265, 1467
AcvI	CACGTG	1 cut(s)	165
AdeI	CACNNNGTG	1 cut(s)	648
AfaI	GTAC	7 cut(s)	88, 1463, 1610, 1669, 2422, 2444, 2681
AfeI	AGCGCT	1 cut(s)	143
AfiI	CCNNNNNNNGG	9 cut(s)	1249, 1273, 1620, 1709, 2026, 2195, 2794, 2823, 2829
AflII	CTTAAG	4 cut(s)	980, 2146, 2372, 2638
AflIII	ACRYGT	3 cut(s)	164, 1217, 2910
AjnI	CCWGG	6 cut(s)	410, 1708, 2360, 2503, 2608, 2822
Alw21I	GWGCWC	5 cut(s)	32, 1945, 2306, 2327, 2371
Alw26I	GTCTC	4 cut(s)	780, 1022, 1513, 2189
Alw44I	GTGCAC	1 cut(s)	1941
AlwI	GGATC	7 cut(s)	430, 485, 818, 831, 1041, 1512, 2222
AlwNI	CAGNNNCTG	2 cut(s)	1136, 2231
Ama87I	CYCGRG	3 cut(s)	872, 1019, 2405
Aor51HI	AGCGCT	1 cut(s)	143
AoxI	GGCC	8 cut(s)	159, 1177, 1363, 1385, 1662, 2529, 2796, 2937
ApaLI	GTGCAC	1 cut(s)	1941
ApeKI	GCWGC	7 cut(s)	287, 986, 1157, 1559, 2269, 2477, 2486
ApoI	RAATTY	6 cut(s)	112, 570, 634, 1277, 2012, 2162
ArsI	GACNNNNNNTTYG	4 cut(s)	320, 352, 2720, 2752
Asp700I	GAANNNNTTC	1 cut(s)	1100
AspA2I	CCTAGG	1 cut(s)	203
AspLEI	GCGC	3 cut(s)	144, 2664, 2835
AspS9I	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
AsuC2I	CCSGG	4 cut(s)	631, 1931, 2190, 2848
AsuHPI	GGTGA	2 cut(s)	380, 2204
AsuNHI	GCTAGC	1 cut(s)	2272
AvaI	CYCGRG	3 cut(s)	872, 1019, 2405
AvaII	GGWCC	3 cut(s)	688, 933, 1623
AvrII	CCTAGG	1 cut(s)	203
AxyI	CCTNAGG	1 cut(s)	2790
BaeGI	GKGCMC	1 cut(s)	1945
BalI	TGGCCA	1 cut(s)	1179
BamHI	GGATCC	1 cut(s)	823
BanI	GGYRCC	2 cut(s)	1696, 1780
BanII	GRGCYC	2 cut(s)	2127, 2327
BauI	CACGAG	1 cut(s)	2514
BbrPI	CACGTG	1 cut(s)	165
BbsI	GAAGAC	2 cut(s)	397, 1554
Bbv12I	GWGCWC	5 cut(s)	32, 1945, 2306, 2327, 2371
BbvCI	CCTCAGC	2 cut(s)	657, 1659
BbvI	GCAGC	7 cut(s)	274, 973, 1169, 1546, 2281, 2489, 2498
BccI	CCATC	8 cut(s)	440, 1169, 1399, 1520, 1799, 1927, 2209, 2726
BceAI	ACGGC	1 cut(s)	499
BcgI	CGANNNNNNTGC	2 cut(s)	2098, 2132
BciT130I	CCWGG	6 cut(s)	412, 1710, 2362, 2505, 2610, 2824
BciVI	GTATCC	2 cut(s)	597, 1912
BclI	TGATCA	1 cut(s)	1270
BcnI	CCSGG	4 cut(s)	631, 1931, 2190, 2848
BcoDI	GTCTC	4 cut(s)	780, 1022, 1513, 2189
BfaI	CTAG	4 cut(s)	204, 549, 791, 2273
BfmI	CTRYAG	1 cut(s)	1936
BfoI	RGCGCY	2 cut(s)	145, 2836
BfrI	CTTAAG	4 cut(s)	980, 2146, 2372, 2638
BfuI	GTATCC	2 cut(s)	597, 1912
BglII	AGATCT	1 cut(s)	454
BlnI	CCTAGG	1 cut(s)	203
Bme18I	GGWCC	3 cut(s)	688, 933, 1623
BmeT110I	CYCGRG	3 cut(s)	872, 1019, 2405
BmgT120I	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
BmiI	GGNNCC	8 cut(s)	825, 935, 1366, 1624, 1625, 1698, 1782, 2633
BmrI	ACTGGG	2 cut(s)	640, 743
BmtI	GCTAGC	1 cut(s)	2276
BmuI	ACTGGG	2 cut(s)	640, 743
BpiI	GAAGAC	2 cut(s)	397, 1554
BpmI	CTGGAG	4 cut(s)	1113, 1692, 2806, 2894
Bpu10I	CCTNAGC	3 cut(s)	657, 1659, 2491
BpuEI	CTTGAG	1 cut(s)	927
BpuMI	CCSGG	4 cut(s)	631, 1931, 2190, 2848
BsaAI	YACGTR	2 cut(s)	165, 2048
BsaBI	GATNNNNATC	2 cut(s)	1032, 1977
BsaI	GGTCTC	2 cut(s)	780, 1022
BsaJI	CCNNGG	9 cut(s)	203, 410, 411, 1368, 1709, 1743, 1930, 2188, 2503
BsaXI	ACNNNNNCTCC	6 cut(s)	149, 179, 1434, 1464, 2748, 2778
Bsc4I	CCNNNNNNNGG	9 cut(s)	1249, 1273, 1620, 1709, 2026, 2195, 2794, 2823, 2829
Bse1I	ACTGG	9 cut(s)	48, 90, 646, 749, 1202, 1207, 1774, 1841, 2877
Bse21I	CCTNAGG	1 cut(s)	2790
Bse3DI	GCAATG	1 cut(s)	2620
Bse8I	GATNNNNATC	2 cut(s)	1032, 1977
BseBI	CCWGG	6 cut(s)	412, 1710, 2362, 2505, 2610, 2824
BseDI	CCNNGG	9 cut(s)	203, 410, 411, 1368, 1709, 1743, 1930, 2188, 2503
BseGI	GGATG	7 cut(s)	451, 626, 1006, 1012, 1363, 1375, 1643
BseJI	GATNNNNATC	2 cut(s)	1032, 1977
BseLI	CCNNNNNNNGG	9 cut(s)	1249, 1273, 1620, 1709, 2026, 2195, 2794, 2823, 2829
BseMI	GCAATG	1 cut(s)	2620
BseNI	ACTGG	9 cut(s)	48, 90, 646, 749, 1202, 1207, 1774, 1841, 2877
BseRI	GAGGAG	3 cut(s)	66, 386, 515
BseSI	GKGCMC	1 cut(s)	1945
BseXI	GCAGC	7 cut(s)	274, 973, 1169, 1546, 2281, 2489, 2498
BseYI	CCCAGC	3 cut(s)	364, 1619, 2022
BsgI	GTGCAG	3 cut(s)	273, 625, 1835
Bsh1236I	CGCG	1 cut(s)	2924
Bsh1285I	CGRYCG	1 cut(s)	1913
BshFI	GGCC	8 cut(s)	161, 1179, 1365, 1387, 1664, 2531, 2798, 2939
BshNI	GGYRCC	2 cut(s)	1696, 1780
BsiEI	CGRYCG	1 cut(s)	1913
BsiHKAI	GWGCWC	5 cut(s)	32, 1945, 2306, 2327, 2371
BsiHKCI	CYCGRG	3 cut(s)	872, 1019, 2405
BsiSI	CCGG	4 cut(s)	630, 1930, 2190, 2848
BslFI	GGGAC	3 cut(s)	221, 627, 1636
BslI	CCNNNNNNNGG	9 cut(s)	1249, 1273, 1620, 1709, 2026, 2195, 2794, 2823, 2829
BsmAI	GTCTC	4 cut(s)	780, 1022, 1513, 2189
BsmFI	GGGAC	3 cut(s)	221, 627, 1636
BsnI	GGCC	8 cut(s)	161, 1179, 1365, 1387, 1664, 2531, 2798, 2939
Bso31I	GGTCTC	2 cut(s)	780, 1022
BsoBI	CYCGRG	3 cut(s)	872, 1019, 2405
Bsp1286I	GDGCHC	6 cut(s)	32, 1945, 2127, 2306, 2327, 2371
Bsp1407I	TGTACA	1 cut(s)	1461
Bsp19I	CCATGG	1 cut(s)	1368
BspACI	CCGC	8 cut(s)	552, 721, 1312, 1384, 2020, 2629, 2803, 2940
BspANI	GGCC	8 cut(s)	161, 1179, 1365, 1387, 1664, 2531, 2798, 2939
BspFNI	CGCG	1 cut(s)	2924
BspHI	TCATGA	1 cut(s)	1801
BspLI	GGNNCC	8 cut(s)	825, 935, 1366, 1624, 1625, 1698, 1782, 2633
BspOI	GCTAGC	1 cut(s)	2276
BspPI	GGATC	7 cut(s)	430, 485, 818, 831, 1041, 1512, 2222
BspT107I	GGYRCC	2 cut(s)	1696, 1780
BspTI	CTTAAG	4 cut(s)	980, 2146, 2372, 2638
BspTNI	GGTCTC	2 cut(s)	780, 1022
BsrDI	GCAATG	1 cut(s)	2620
BsrGI	TGTACA	1 cut(s)	1461
BsrI	ACTGG	9 cut(s)	48, 90, 646, 749, 1202, 1207, 1774, 1841, 2877
BssECI	CCNNGG	9 cut(s)	203, 410, 411, 1368, 1709, 1743, 1930, 2188, 2503
BssNAI	GTATAC	1 cut(s)	714
BssSI	CACGAG	1 cut(s)	2514
BssT1I	CCWWGG	2 cut(s)	203, 1368
Bst1107I	GTATAC	1 cut(s)	714
Bst2BI	CACGAG	1 cut(s)	2514
Bst2UI	CCWGG	6 cut(s)	412, 1710, 2362, 2505, 2610, 2824
Bst4CI	ACNGT	8 cut(s)	692, 1261, 1423, 1429, 1855, 2139, 2308, 2901
Bst6I	CTCTTC	4 cut(s)	84, 1043, 1875, 2325
BstAFI	CTTAAG	4 cut(s)	980, 2146, 2372, 2638
BstAPI	GCANNNNNTGC	3 cut(s)	1154, 1589, 2396
BstAUI	TGTACA	1 cut(s)	1461
BstBAI	YACGTR	2 cut(s)	165, 2048
BstC8I	GCNNGC	5 cut(s)	257, 1363, 2043, 2274, 2367
BstDSI	CCRYGG	2 cut(s)	1368, 1743
BstENI	CCTNNNNNAGG	2 cut(s)	1247, 2821
BstF5I	GGATG	7 cut(s)	451, 626, 1006, 1012, 1363, 1375, 1643
BstFNI	CGCG	1 cut(s)	2924
BstH2I	RGCGCY	2 cut(s)	145, 2836
BstHHI	GCGC	3 cut(s)	144, 2664, 2835
BstMAI	GTCTC	4 cut(s)	780, 1022, 1513, 2189
BstMCI	CGRYCG	1 cut(s)	1913
BstNI	CCWGG	6 cut(s)	412, 1710, 2362, 2505, 2610, 2824
BstNSI	RCATGY	3 cut(s)	720, 968, 1221
BstSFI	CTRYAG	1 cut(s)	1936
BstSLI	GKGCMC	1 cut(s)	1945
BstUI	CGCG	1 cut(s)	2924
BstV1I	GCAGC	7 cut(s)	274, 973, 1169, 1546, 2281, 2489, 2498
BstV2I	GAAGAC	2 cut(s)	397, 1554
BstX2I	RGATCY	6 cut(s)	422, 454, 823, 1033, 1504, 2227
BstXI	CCANNNNNNTGG	2 cut(s)	55, 2935
BstYI	RGATCY	6 cut(s)	422, 454, 823, 1033, 1504, 2227
BstZ17I	GTATAC	1 cut(s)	714
Bsu36I	CCTNAGG	1 cut(s)	2790
BsuI	GTATCC	2 cut(s)	597, 1912
BsuRI	GGCC	8 cut(s)	161, 1179, 1365, 1387, 1664, 2531, 2798, 2939
BtgI	CCRYGG	2 cut(s)	1368, 1743
BtgZI	GCGATG	1 cut(s)	2385
BtsCI	GGATG	7 cut(s)	451, 626, 1006, 1012, 1363, 1375, 1643
BtsIMutI	CAGTG	4 cut(s)	89, 653, 756, 1428
Cac8I	GCNNGC	5 cut(s)	257, 1363, 2043, 2274, 2367
CaiI	CAGNNNCTG	2 cut(s)	1136, 2231
CciI	TCATGA	1 cut(s)	1801
CfoI	GCGC	3 cut(s)	144, 2664, 2835
Cfr13I	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
CseI	GACGC	1 cut(s)	2913
Csp6I	GTAC	7 cut(s)	87, 1462, 1609, 1668, 2421, 2443, 2680
CviQI	GTAC	7 cut(s)	87, 1462, 1609, 1668, 2421, 2443, 2680
DraI	TTTAAA	1 cut(s)	495
DraIII	CACNNNGTG	1 cut(s)	648
EaeI	YGGCCR	4 cut(s)	1177, 1385, 2529, 2937
Eam1104I	CTCTTC	4 cut(s)	84, 1043, 1875, 2325
EarI	CTCTTC	4 cut(s)	84, 1043, 1875, 2325
Ecl136II	GAGCTC	1 cut(s)	2325
Eco130I	CCWWGG	2 cut(s)	203, 1368
Eco24I	GRGCYC	2 cut(s)	2127, 2327
Eco31I	GGTCTC	2 cut(s)	780, 1022
Eco47I	GGWCC	3 cut(s)	688, 933, 1623
Eco47III	AGCGCT	1 cut(s)	143
Eco53kI	GAGCTC	1 cut(s)	2325
Eco57I	CTGAAG	3 cut(s)	65, 1265, 1467
Eco72I	CACGTG	1 cut(s)	165
Eco81I	CCTNAGG	1 cut(s)	2790
Eco88I	CYCGRG	3 cut(s)	872, 1019, 2405
EcoICRI	GAGCTC	1 cut(s)	2325
EcoNI	CCTNNNNNAGG	2 cut(s)	1247, 2821
EcoO109I	RGGNCCY	1 cut(s)	1623
EcoRI	GAATTC	1 cut(s)	112
EcoRII	CCWGG	6 cut(s)	410, 1708, 2360, 2503, 2608, 2822
EcoT14I	CCWWGG	2 cut(s)	203, 1368
EcoT38I	GRGCYC	2 cut(s)	2127, 2327
ErhI	CCWWGG	2 cut(s)	203, 1368
FalI	AAGNNNNNCTT	2 cut(s)	2280, 2312
FaqI	GGGAC	3 cut(s)	221, 627, 1636
FauI	CCCGC	2 cut(s)	545, 2810
FbaI	TGATCA	1 cut(s)	1270
FblI	GTMKAC	2 cut(s)	713, 1845
FokI	GGATG	7 cut(s)	458, 613, 1013, 1019, 1362, 1370, 1630
FriOI	GRGCYC	2 cut(s)	2127, 2327
FspBI	CTAG	4 cut(s)	204, 549, 791, 2273
FspI	TGCGCA	1 cut(s)	2663
GlaI	GCGC	3 cut(s)	143, 2663, 2834
GsaI	CCCAGC	3 cut(s)	368, 1623, 2026
GsuI	CTGGAG	4 cut(s)	1113, 1692, 2806, 2894
HaeII	RGCGCY	2 cut(s)	145, 2836
HaeIII	GGCC	8 cut(s)	161, 1179, 1365, 1387, 1664, 2531, 2798, 2939
HapII	CCGG	4 cut(s)	630, 1930, 2190, 2848
HgaI	GACGC	1 cut(s)	2913
HhaI	GCGC	3 cut(s)	144, 2664, 2835
Hin6I	GCGC	3 cut(s)	142, 2662, 2833
HinP1I	GCGC	3 cut(s)	142, 2662, 2833
HincII	GTYRAC	1 cut(s)	271
HindII	GTYRAC	1 cut(s)	271
HindIII	AAGCTT	2 cut(s)	253, 2149
HinfI	GANTC	9 cut(s)	275, 341, 518, 1297, 1763, 1915, 2003, 2104, 2411
HpaII	CCGG	4 cut(s)	630, 1930, 2190, 2848
HphI	GGTGA	2 cut(s)	380, 2204
Hpy166II	GTNNAC	8 cut(s)	87, 271, 714, 1757, 1846, 1943, 2421, 2680
Hpy8I	GTNNAC	8 cut(s)	87, 271, 714, 1757, 1846, 1943, 2421, 2680
HpyAV	CCTTC	7 cut(s)	304, 413, 838, 1240, 2189, 2545, 2827
HpyCH4III	ACNGT	8 cut(s)	692, 1261, 1423, 1429, 1855, 2139, 2308, 2901
HpyCH4IV	ACGT	3 cut(s)	164, 2047, 2910
HpySE526I	ACGT	3 cut(s)	164, 2047, 2910
HspAI	GCGC	3 cut(s)	142, 2662, 2833
KflI	GGGWCCC	1 cut(s)	1623
Ksp22I	TGATCA	1 cut(s)	1270
LmnI	GCTCC	6 cut(s)	79, 219, 1073, 1442, 1932, 2322
Lsp1109I	GCAGC	7 cut(s)	274, 973, 1169, 1546, 2281, 2489, 2498
MaeI	CTAG	4 cut(s)	204, 549, 791, 2273
MaeII	ACGT	3 cut(s)	164, 2047, 2910
MaeIII	GTNAC	4 cut(s)	1213, 1423, 1537, 1864
MfeI	CAATTG	2 cut(s)	381, 1629
MflI	RGATCY	6 cut(s)	422, 454, 823, 1033, 1504, 2227
MhlI	GDGCHC	6 cut(s)	32, 1945, 2127, 2306, 2327, 2371
MlsI	TGGCCA	1 cut(s)	1179
MluNI	TGGCCA	1 cut(s)	1179
MlyI	GAGTC	3 cut(s)	335, 1306, 1757
MmeI	TCCRAC	3 cut(s)	2031, 2104, 2166
Mox20I	TGGCCA	1 cut(s)	1179
MroXI	GAANNNNTTC	1 cut(s)	1100
MscI	TGGCCA	1 cut(s)	1179
MslI	CAYNNNNRTG	5 cut(s)	25, 1403, 1742, 1803, 2459
Msp20I	TGGCCA	1 cut(s)	1179
MspA1I	CMGCKG	1 cut(s)	2022
MspCI	CTTAAG	4 cut(s)	980, 2146, 2372, 2638
MspI	CCGG	4 cut(s)	630, 1930, 2190, 2848
MunI	CAATTG	2 cut(s)	381, 1629
MvaI	CCWGG	6 cut(s)	412, 1710, 2362, 2505, 2610, 2824
MvnI	CGCG	1 cut(s)	2924
NciI	CCSGG	4 cut(s)	631, 1931, 2190, 2848
NcoI	CCATGG	1 cut(s)	1368
NheI	GCTAGC	1 cut(s)	2272
NlaIV	GGNNCC	8 cut(s)	825, 935, 1366, 1624, 1625, 1698, 1782, 2633
NmuCI	GTSAC	2 cut(s)	1213, 1423
NsbI	TGCGCA	1 cut(s)	2663
NspI	RCATGY	3 cut(s)	720, 968, 1221
PaeR7I	CTCGAG	3 cut(s)	872, 1019, 2405
PagI	TCATGA	1 cut(s)	1801
PasI	CCCWGGG	1 cut(s)	411
PciI	ACATGT	1 cut(s)	1217
PdmI	GAANNNNTTC	1 cut(s)	1100
PfeI	GAWTC	6 cut(s)	275, 518, 1915, 2003, 2104, 2411
PfoI	TCCNGGA	1 cut(s)	629
PleI	GAGTC	3 cut(s)	335, 1305, 1757
PmaCI	CACGTG	1 cut(s)	165
PmlI	CACGTG	1 cut(s)	165
PpsI	GAGTC	3 cut(s)	335, 1305, 1757
Ppu21I	YACGTR	2 cut(s)	165, 2048
PpuMI	RGGWCCY	1 cut(s)	1623
PscI	ACATGT	1 cut(s)	1217
PsiI	TTATAA	1 cut(s)	1653
Psp124BI	GAGCTC	1 cut(s)	2327
Psp5II	RGGWCCY	1 cut(s)	1623
Psp6I	CCWGG	6 cut(s)	410, 1708, 2360, 2503, 2608, 2822
PspCI	CACGTG	1 cut(s)	165
PspFI	CCCAGC	3 cut(s)	364, 1619, 2022
PspGI	CCWGG	6 cut(s)	410, 1708, 2360, 2503, 2608, 2822
PspN4I	GGNNCC	8 cut(s)	825, 935, 1366, 1624, 1625, 1698, 1782, 2633
PspPI	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
PspPPI	RGGWCCY	1 cut(s)	1623
PspXI	VCTCGAGB	1 cut(s)	2405
PstNI	CAGNNNCTG	2 cut(s)	1136, 2231
PsuI	RGATCY	6 cut(s)	422, 454, 823, 1033, 1504, 2227
RsaI	GTAC	7 cut(s)	88, 1463, 1610, 1669, 2422, 2444, 2681
RsaNI	GTAC	7 cut(s)	87, 1462, 1609, 1668, 2421, 2443, 2680
RseI	CAYNNNNRTG	5 cut(s)	25, 1403, 1742, 1803, 2459
SacI	GAGCTC	1 cut(s)	2327
Sau96I	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
SchI	GAGTC	3 cut(s)	335, 1306, 1757
SduI	GDGCHC	6 cut(s)	32, 1945, 2127, 2306, 2327, 2371
SfcI	CTRYAG	1 cut(s)	1936
Sfr274I	CTCGAG	3 cut(s)	872, 1019, 2405
SinI	GGWCC	3 cut(s)	688, 933, 1623
SlaI	CTCGAG	3 cut(s)	872, 1019, 2405
SmiMI	CAYNNNNRTG	5 cut(s)	25, 1403, 1742, 1803, 2459
SmlI	CTYRAG	8 cut(s)	872, 942, 980, 1019, 2146, 2372, 2405, 2638
SmoI	CTYRAG	8 cut(s)	872, 942, 980, 1019, 2146, 2372, 2405, 2638
SsiI	CCGC	8 cut(s)	552, 721, 1312, 1384, 2020, 2629, 2803, 2940
SspI	AATATT	2 cut(s)	303, 2380
SspMI	CTAG	4 cut(s)	204, 549, 791, 2273
SstI	GAGCTC	1 cut(s)	2327
StyI	CCWWGG	2 cut(s)	203, 1368
TaaI	ACNGT	8 cut(s)	692, 1261, 1423, 1429, 1855, 2139, 2308, 2901
TaiI	ACGT	3 cut(s)	167, 2050, 2913
TaqI	TCGA	4 cut(s)	873, 910, 1020, 2406
TaqII	GACCGA	1 cut(s)	1927
TatI	WGTACW	4 cut(s)	1461, 2420, 2442, 2679
TauI	GCSGC	3 cut(s)	723, 1387, 2942
TfiI	GAWTC	6 cut(s)	275, 518, 1915, 2003, 2104, 2411
TscAI	CASTG	4 cut(s)	89, 653, 756, 1428
TseFI	GTSAC	2 cut(s)	1213, 1423
TseI	GCWGC	7 cut(s)	287, 986, 1157, 1559, 2269, 2477, 2486
Tsp45I	GTSAC	2 cut(s)	1213, 1423
TspDTI	ATGAA	8 cut(s)	1007, 1272, 1449, 1726, 1876, 2231, 2295, 2856
TspGWI	ACGGA	1 cut(s)	1256
TspRI	CASTG	4 cut(s)	89, 653, 756, 1428
Vha464I	CTTAAG	4 cut(s)	980, 2146, 2372, 2638
VneI	GTGCAC	1 cut(s)	1941
VpaK11BI	GGWCC	3 cut(s)	688, 933, 1623
XagI	CCTNNNNNAGG	2 cut(s)	1247, 2821
XapI	RAATTY	6 cut(s)	112, 570, 634, 1277, 2012, 2162
XceI	RCATGY	3 cut(s)	720, 968, 1221
XcmI	CCANNNNNNNNNTGG	4 cut(s)	1117, 1199, 2729, 2869
XhoI	CTCGAG	3 cut(s)	872, 1019, 2405
XmaJI	CCTAGG	1 cut(s)	203
XmiI	GTMKAC	2 cut(s)	713, 1845
XmnI	GAANNNNTTC	1 cut(s)	1100
XspI	CTAG	4 cut(s)	204, 549, 791, 2273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.