pycom06g09740

Probable zinc-ribbon domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
OG0008950
Physical Location & Seq
Forward (+)
15065542 .. 15068654
3113 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2484 bp
ATGGATTTAAAGGGAGGTAGAGGAAAAGAGAGAGTTTTCAGAAAAAGAAATGATGAGTCGATTAGTGGTAGTTCATCAAGAACAGACAGCAAAAAGGTTATGGTTGATAATTTCTCTGGAGATGAGATTGAAATGAACGTGAGTAGGTGTATGTCTGTAGTTTCAAGTGTAGAAGATATTTCGGCCCCCTTAATGAATTTTGCTGGGTCAGTGAGATCAAGGGAAAGTATGGACCAGTTTCGAGGTGTAGAAAGAGATCGGTTTGATGGGTTTTACGTGAGCCCTATGGTCGGGGCTCAGCGTGGAAGACTGCCAACTTCTGCTTATCCTGACGAGGGGCCTTCAACCTACGAGGTAGACTCTTTTGATGGTACGAGTGAAGTTGAAAATTTAGAGCAGAATCGAGCGGATCTTCTGAGGAAGTTGGATGAGCTGAAGGAGAAACTGTGCAGATCTTATGATGTGGCAGATAAACCAAGGGAACCGGTTCCTATGGAGAGGAGTAGAAGGCCGCCTGATCCTTATGGTGACCTGATAACTTGTACTCTTTCGATGCAGCCTTACGCTGTGGACGAGCAGATGACAAGACCCCCTTACTTCAACAATAGCCATGGACCTGTAACTTTTACGGATCATCATAATATGGTTATGCAGCAGAAGAACTTTCCTTCTCAAAGGCATCCATGGAATGTGATTCCAGAAAATGAGGATCCGTCTCAGCAACAAATGAAACGGAGGCCTCCCCATCATCCACTTCAATACACAAGACCACCACCTAACGAAAAATTTATGGGACGGCACATGGAATTCAATGCAAATCCACATGAAAACGCTTCTCACTCACCCGCTTGCTCTTGTTCAGGCTGCTACAACCCAAATTGGGTAGCTACACCCCAAGTCCCGCTTGATGATTTTGGAAATCGAAGGGTTCCAAAAGCTCCGATTAATTTGAATTCCAACCACCATGTCAATCCTGTTATGTTTCTGCCACGTGATTATAATCCACGACATGCTAGTCCTCCTCCATTGCACATAAGGTGGCAAAGTGATTCAGAACCAAGAACCGCTATGGCAATCAATAGGCGTGGACGAATCTTCCATCCTGTAGCAGGTGGTGCCCCATTCATCACATGCTTTTGGTGCTTTGAAATACTGAAACTGCCGAGAAAACTTGAAAATACGAATAAGAATCAGTCAAAACTGCAGTGTGGTTCCTGTTCAACTGTTATCTCACTTGAAATCAAGAACAAAAAGCTCTTTACTTCTAAAGATTCCAAGCAACAATCTTCTGAGGTTGGTCAAAGTTCTAATGAGGCATTAAAAGGCAGCGTTTTAAGTCTTCATGGTAGTCGGAATGCAGGTGACACCAAATCCCCCTGTGATGATTTAGATCATTCTGATCAAACCTTGCCATTCATTGACACCGAAGACAATTTACCGACAGAAGATCAGAAGCTGGACATGGATGAATCTGAGAAGAGGCGAGGTCCTACTTCGACATCTTCCATCCCTTCCAAGGAGGAGGGGGAGGAGGAGATATCAGATTGTGTGATCGCTCGGCTGGACATGGATGAATTTGTGAAGAGGCAAGGTCTTACTTTGACATCTTCCGTCCCTTCCAAGGAGGGGGAGGAGATATCAGATTGTGTGATCGCAAATACAGACGTTTCTGGCTCTGCTGAGTTGCCAACAAAAGAGTCCTTTTCTCCAAAGCGTCCAGGTTCACCTCTCTGGGAGCAGCCTGGTAGTTCTAAACATACAGTAAGCAGAGCCGAGAAGGGAAATGACAGTGACTGCAAGAACCAAGACAAGGCACTCTTTAGAAAGATCGCTTCTCGACAGAATTCTGTGAAAGATAGTTCAGTGGAAACCAATGTGGATGTTTCTTACAATGAATATCTTAATACCAACATTTCTAAAGACTCTGCAGAGGGAAGAAAAGAACAAGATCCCCCCAAAATCGGCAAGGGTGCAGATTCCTTATTGGTGGGTCTCATAAAAAAGAGCTCTAGAGATGTCTCAAAATCTAACCAAGGTGTGGAGAAAACAAGGCCTACTGTTTTTATTAACGGGCAACCTATTCCGGATCATGTTGTTAGGAAAGCTGAAATGCTCGCTGGCCCGATTCGACCTGGAGATTATTGGTATGATTTCAGAGCCGGATTCTGGGGTGTGATGGGCCAAGCTTGCCTCGGCATAATTCCTCCTTTTATTGAAGAATTCAATTACCCCATTCCAACAAATTGTGCTGCTGGCAATACCGGTGTCTATGTAAACGGGAGAGAGCTACATCAGAGAGATTTGGACCTGCTTGCAGGGAGAGGACTACCAACTACAAGAGAGAAATTTTATGTCGTCGAAATGTCTGGGAGAGTGGTGGATGAGGACTCAGGGGAAGATTTAAAAAGCCTCGGCAAACTTGCCCCTACAATTGAGAAGGCAAAGCGTGGATTTGGCATGAAGGTCCCCAGAATGGTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zinc_ribbon_12

Protein Analysis

828

Amino Acids

92.5

Weight (kDa)

6.31

Isoelectric Point (pI)

52.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zn_ribbon_12 PF11331 370 - 414 1.7e-19 EDR4 zinc-ribbon domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 999
AarI CACCTGC 2 cut(s) 1100, 1349
AasI GACNNNNNNGTC 1 cut(s) 1014
Acc36I ACCTGC 3 cut(s) 1100, 1349, 2316
AccB1I GGYRCC 1 cut(s) 1115
AccB7I CCANNNNNTGG 1 cut(s) 2038
AccBSI CCGCTC 1 cut(s) 407
AccI GTMKAC 1 cut(s) 357
AccIII TCCGGA 1 cut(s) 2083
AciI CCGC 5 cut(s) 407, 512, 846, 902, 1065
AclWI GGATC 7 cut(s) 417, 512, 639, 704, 717, 1943, 2094
AcsI RAATTY 9 cut(s) 196, 388, 785, 806, 952, 1574, 1843, 2219, 2345
AcuI CTGAAG 1 cut(s) 455
AcvI CACGTG 1 cut(s) 992
AfaI GTAC 2 cut(s) 373, 544
AgeI ACCGGT 2 cut(s) 484, 2261
AjnI CCWGG 3 cut(s) 1717, 1741, 2131
AluBI AGCT 9 cut(s) 433, 887, 938, 1255, 1456, 2007, 2105, 2186, 2287
AluI AGCT 9 cut(s) 433, 887, 938, 1255, 1456, 2007, 2105, 2186, 2287
Alw21I GWGCWC 1 cut(s) 2009
Alw26I GTCTC 3 cut(s) 720, 1997, 2023
AlwI GGATC 7 cut(s) 417, 512, 639, 704, 717, 1943, 2094
AlwNI CAGNNNCTG 2 cut(s) 1456, 1794
Aor13HI TCCGGA 1 cut(s) 2083
AoxI GGCC 7 cut(s) 183, 338, 509, 737, 2051, 2119, 2179
ApeKI GCWGC 6 cut(s) 556, 652, 864, 1326, 1738, 2249
ApoI RAATTY 9 cut(s) 196, 388, 785, 806, 952, 1574, 1843, 2219, 2345
AseI ATTAAT 1 cut(s) 945
AsiGI ACCGGT 2 cut(s) 484, 2261
Asp700I GAANNNNTTC 1 cut(s) 486
AspS9I GGNCC 9 cut(s) 184, 232, 338, 614, 1487, 2120, 2179, 2305, 2464
AsuHPI GGTGA 4 cut(s) 539, 834, 1373, 1716
AvaII GGWCC 5 cut(s) 232, 614, 1487, 2305, 2464
BaeGI GKGCMC 1 cut(s) 1120
BamHI GGATCC 1 cut(s) 709
BanI GGYRCC 1 cut(s) 1115
BanII GRGCYC 3 cut(s) 284, 298, 2009
BarI GAAGNNNNNNTAC 2 cut(s) 1419, 1451
BbrPI CACGTG 1 cut(s) 992
BbsI GAAGAC 3 cut(s) 313, 1331, 1434
Bbv12I GWGCWC 1 cut(s) 2009
BbvI GCAGC 6 cut(s) 568, 664, 851, 1338, 1750, 2236
BccI CCATC 6 cut(s) 260, 362, 753, 1107, 1514, 2170
BceAI ACGGC 1 cut(s) 812
BciT130I CCWGG 3 cut(s) 1719, 1743, 2133
BclI TGATCA 1 cut(s) 1399
BcoDI GTCTC 3 cut(s) 720, 1997, 2023
BfaI CTAG 2 cut(s) 1014, 2010
BfmI CTRYAG 4 cut(s) 156, 1104, 1202, 1926
BfuAI ACCTGC 3 cut(s) 1100, 1349, 2316
BglII AGATCT 1 cut(s) 452
BisI GCNGC 7 cut(s) 512, 557, 653, 865, 1327, 1739, 2250
BlpI GCTNAGC 1 cut(s) 297
BlsI GCNGC 7 cut(s) 513, 558, 654, 866, 1328, 1740, 2251
Bme1390I CCNGG 3 cut(s) 1719, 1743, 2133
Bme18I GGWCC 5 cut(s) 232, 614, 1487, 2305, 2464
BmgT120I GGNCC 9 cut(s) 184, 232, 338, 614, 1487, 2120, 2179, 2305, 2464
BmiI GGNNCC 9 cut(s) 186, 339, 483, 489, 711, 930, 1117, 1213, 2466
BmrFI CCNGG 3 cut(s) 1719, 1743, 2133
BmsI GCATC 2 cut(s) 543, 688
BpiI GAAGAC 3 cut(s) 313, 1331, 1434
BplI GAGNNNNNCTC 2 cut(s) 344, 376
BpmI CTGGAG 2 cut(s) 138, 2154
Bpu1102I GCTNAGC 1 cut(s) 297
BsaAI YACGTR 2 cut(s) 277, 992
BsaBI GATNNNNATC 2 cut(s) 999, 1389
BsaI GGTCTC 1 cut(s) 1997
BsaJI CCNNGG 8 cut(s) 476, 610, 683, 1515, 1620, 2032, 2191, 2410
BsaWI WCCGGW 3 cut(s) 484, 2083, 2261
BsaXI ACNNNNNCTCC 2 cut(s) 431, 461
Bse118I RCCGGY 2 cut(s) 484, 2261
Bse1I ACTGG 1 cut(s) 235
Bse3DI GCAATG 1 cut(s) 1025
Bse8I GATNNNNATC 2 cut(s) 999, 1389
BseAI TCCGGA 1 cut(s) 2083
BseBI CCWGG 3 cut(s) 1719, 1743, 2133
BseDI CCNNGG 8 cut(s) 476, 610, 683, 1515, 1620, 2032, 2191, 2410
BseGI GGATG 9 cut(s) 433, 679, 748, 1099, 1471, 1506, 1576, 1885, 2386
BseJI GATNNNNATC 2 cut(s) 999, 1389
BseMI GCAATG 1 cut(s) 1025
BseMII CTCAG 7 cut(s) 311, 407, 731, 1281, 1464, 1671, 2403
BseNI ACTGG 1 cut(s) 235
BseRI GAGGAG 6 cut(s) 514, 1011, 1535, 1544, 1547, 1646
BseSI GKGCMC 1 cut(s) 1120
BseXI GCAGC 6 cut(s) 568, 664, 851, 1338, 1750, 2236
BseYI CCCAGC 1 cut(s) 203
BsgI GTGCAG 2 cut(s) 469, 1992
BshFI GGCC 7 cut(s) 185, 340, 511, 739, 2053, 2121, 2181
BshNI GGYRCC 1 cut(s) 1115
BshTI ACCGGT 2 cut(s) 484, 2261
BsiHKAI GWGCWC 1 cut(s) 2009
BsiSI CCGG 4 cut(s) 485, 2084, 2160, 2262
BslFI GGGAC 4 cut(s) 807, 884, 1598, 2450
BsmAI GTCTC 3 cut(s) 720, 1997, 2023
BsmBI CGTCTC 1 cut(s) 720
BsmFI GGGAC 4 cut(s) 807, 884, 1598, 2450
BsmI GAATGC 1 cut(s) 1360
BsnI GGCC 7 cut(s) 185, 340, 511, 739, 2053, 2121, 2181
Bso31I GGTCTC 1 cut(s) 1997
Bsp1286I GDGCHC 4 cut(s) 284, 298, 1120, 2009
Bsp13I TCCGGA 1 cut(s) 2083
Bsp1720I GCTNAGC 1 cut(s) 297
Bsp19I CCATGG 2 cut(s) 610, 683
BspACI CCGC 5 cut(s) 407, 512, 846, 902, 1065
BspANI GGCC 7 cut(s) 185, 340, 511, 739, 2053, 2121, 2181
BspCNI CTCAG 7 cut(s) 310, 408, 730, 1282, 1465, 1672, 2402
BspEI TCCGGA 1 cut(s) 2083
BspLI GGNNCC 9 cut(s) 186, 339, 483, 489, 711, 930, 1117, 1213, 2466
BspMAI CTGCAG 2 cut(s) 1206, 1930
BspMI ACCTGC 3 cut(s) 1100, 1349, 2316
BspPI GGATC 7 cut(s) 417, 512, 639, 704, 717, 1943, 2094
BspT107I GGYRCC 1 cut(s) 1115
BspTNI GGTCTC 1 cut(s) 1997
BsrBI CCGCTC 1 cut(s) 407
BsrDI GCAATG 1 cut(s) 1025
BsrFI RCCGGY 2 cut(s) 484, 2261
BsrI ACTGG 1 cut(s) 235
BssAI RCCGGY 2 cut(s) 484, 2261
BssECI CCNNGG 8 cut(s) 476, 610, 683, 1515, 1620, 2032, 2191, 2410
BssT1I CCWWGG 6 cut(s) 476, 610, 683, 1515, 1620, 2032
Bst2UI CCWGG 3 cut(s) 1719, 1743, 2133
Bst4CI ACNGT 5 cut(s) 447, 1225, 1762, 1790, 2059
Bst6I CTCTTC 2 cut(s) 1472, 1577
BstAPI GCANNNNNTGC 1 cut(s) 1115
BstBAI YACGTR 2 cut(s) 277, 992
BstC8I GCNNGC 6 cut(s) 850, 2115, 2119, 2188, 2254, 2313
BstDEI CTNAG 7 cut(s) 297, 416, 717, 1290, 1473, 1680, 2389
BstDSI CCRYGG 2 cut(s) 610, 683
BstEII GGTNACC 1 cut(s) 527
BstENI CCTNNNNNAGG 1 cut(s) 1107
BstF5I GGATG 9 cut(s) 433, 679, 748, 1099, 1471, 1506, 1576, 1885, 2386
BstMAI GTCTC 3 cut(s) 720, 1997, 2023
BstMWI GCNNNNNNNGC 3 cut(s) 1115, 1140, 2187
BstNI CCWGG 3 cut(s) 1719, 1743, 2133
BstNSI RCATGY 2 cut(s) 1013, 1134
BstPI GGTNACC 1 cut(s) 527
BstSCI CCNGG 3 cut(s) 1717, 1741, 2131
BstSFI CTRYAG 4 cut(s) 156, 1104, 1202, 1926
BstSLI GKGCMC 1 cut(s) 1120
BstV1I GCAGC 6 cut(s) 568, 664, 851, 1338, 1750, 2236
BstV2I GAAGAC 3 cut(s) 313, 1331, 1434
BstX2I RGATCY 4 cut(s) 409, 452, 709, 1948
BstYI RGATCY 4 cut(s) 409, 452, 709, 1948
BsuRI GGCC 7 cut(s) 185, 340, 511, 739, 2053, 2121, 2181
BtgI CCRYGG 2 cut(s) 610, 683
BtsCI GGATG 9 cut(s) 433, 679, 748, 1099, 1471, 1506, 1576, 1885, 2386
BtsI GCAGTG 1 cut(s) 1211
BtsIMutI CAGTG 4 cut(s) 216, 1211, 1795, 1869
BveI ACCTGC 3 cut(s) 1100, 1349, 2316
Cac8I GCNNGC 6 cut(s) 850, 2115, 2119, 2188, 2254, 2313
CaiI CAGNNNCTG 2 cut(s) 1456, 1794
Cfr10I RCCGGY 2 cut(s) 484, 2261
Cfr13I GGNCC 9 cut(s) 184, 232, 338, 614, 1487, 2120, 2179, 2305, 2464
CseI GACGC 1 cut(s) 1703
Csp6I GTAC 2 cut(s) 372, 543
CspAI ACCGGT 2 cut(s) 484, 2261
CspCI CAANNNNNGTGG 2 cut(s) 1066, 1101
CviQI GTAC 2 cut(s) 372, 543
DdeI CTNAG 7 cut(s) 297, 416, 717, 1290, 1473, 1680, 2389
DraI TTTAAA 2 cut(s) 9, 2403
DrdI GACNNNNNNGTC 1 cut(s) 1014
DseDI GACNNNNNNGTC 1 cut(s) 1014
Eam1104I CTCTTC 2 cut(s) 1472, 1577
EarI CTCTTC 2 cut(s) 1472, 1577
Ecl136II GAGCTC 1 cut(s) 2007
Eco130I CCWWGG 6 cut(s) 476, 610, 683, 1515, 1620, 2032
Eco147I AGGCCT 2 cut(s) 739, 2053
Eco24I GRGCYC 3 cut(s) 284, 298, 2009
Eco31I GGTCTC 1 cut(s) 1997
Eco32I GATATC 2 cut(s) 1539, 1638
Eco47I GGWCC 5 cut(s) 232, 614, 1487, 2305, 2464
Eco53kI GAGCTC 1 cut(s) 2007
Eco57I CTGAAG 1 cut(s) 455
Eco72I CACGTG 1 cut(s) 992
Eco91I GGTNACC 1 cut(s) 527
EcoICRI GAGCTC 1 cut(s) 2007
EcoNI CCTNNNNNAGG 1 cut(s) 1107
EcoO109I RGGNCCY 3 cut(s) 338, 1487, 2464
EcoO65I GGTNACC 1 cut(s) 527
EcoRI GAATTC 4 cut(s) 806, 952, 1843, 2219
EcoRII CCWGG 3 cut(s) 1717, 1741, 2131
EcoRV GATATC 2 cut(s) 1539, 1638
EcoT14I CCWWGG 6 cut(s) 476, 610, 683, 1515, 1620, 2032
EcoT38I GRGCYC 3 cut(s) 284, 298, 2009
ErhI CCWWGG 6 cut(s) 476, 610, 683, 1515, 1620, 2032
Esp3I CGTCTC 1 cut(s) 720
FalI AAGNNNNNCTT 6 cut(s) 577, 609, 888, 920, 1802, 1834
FaqI GGGAC 4 cut(s) 807, 884, 1598, 2450
FauI CCCGC 2 cut(s) 853, 909
FbaI TGATCA 1 cut(s) 1399
FblI GTMKAC 1 cut(s) 357
Fnu4HI GCNGC 7 cut(s) 512, 557, 653, 865, 1327, 1739, 2250
FokI GGATG 9 cut(s) 440, 666, 735, 1086, 1478, 1493, 1583, 1892, 2393
FriOI GRGCYC 3 cut(s) 284, 298, 2009
Fsp4HI GCNGC 7 cut(s) 512, 557, 653, 865, 1327, 1739, 2250
FspBI CTAG 2 cut(s) 1014, 2010
GluI GCNGC 7 cut(s) 512, 557, 653, 865, 1327, 1739, 2250
GsaI CCCAGC 1 cut(s) 207
GsuI CTGGAG 2 cut(s) 138, 2154
HaeIII GGCC 7 cut(s) 185, 340, 511, 739, 2053, 2121, 2181
HapII CCGG 4 cut(s) 485, 2084, 2160, 2262
HgaI GACGC 1 cut(s) 1703
HindIII AAGCTT 1 cut(s) 2184
HpaII CCGG 4 cut(s) 485, 2084, 2160, 2262
HphI GGTGA 4 cut(s) 539, 834, 1373, 1716
Hpy166II GTNNAC 5 cut(s) 358, 571, 1088, 1724, 2275
Hpy188III TCNNGA 8 cut(s) 78, 117, 329, 698, 1243, 1836, 2010, 2084
Hpy8I GTNNAC 5 cut(s) 358, 571, 1088, 1724, 2275
Hpy99I CGWCG 1 cut(s) 2360
HpyCH4III ACNGT 5 cut(s) 447, 1225, 1762, 1790, 2059
HpyCH4IV ACGT 4 cut(s) 138, 276, 991, 1665
HpyF10VI GCNNNNNNNGC 3 cut(s) 1115, 1140, 2187
HpyF3I CTNAG 7 cut(s) 297, 416, 717, 1290, 1473, 1680, 2389
HpySE526I ACGT 4 cut(s) 138, 276, 991, 1665
Kpn2I TCCGGA 1 cut(s) 2083
Ksp22I TGATCA 1 cut(s) 1399
LmnI GCTCC 2 cut(s) 943, 1735
Lsp1109I GCAGC 6 cut(s) 568, 664, 851, 1338, 1750, 2236
LweI GCATC 2 cut(s) 543, 688
MaeI CTAG 2 cut(s) 1014, 2010
MaeII ACGT 4 cut(s) 138, 276, 991, 1665
MaeIII GTNAC 4 cut(s) 527, 619, 1361, 1790
MbiI CCGCTC 1 cut(s) 407
MfeI CAATTG 1 cut(s) 2430
MflI RGATCY 4 cut(s) 409, 452, 709, 1948
MhlI GDGCHC 4 cut(s) 284, 298, 1120, 2009
MlyI GAGTC 5 cut(s) 65, 353, 1706, 1916, 2381
MmeI TCCRAC 4 cut(s) 405, 981, 1331, 2261
MroI TCCGGA 1 cut(s) 2083
MroXI GAANNNNTTC 1 cut(s) 486
MseI TTAA 8 cut(s) 8, 191, 945, 1319, 1334, 1902, 2067, 2402
MspI CCGG 4 cut(s) 485, 2084, 2160, 2262
MspR9I CCNGG 3 cut(s) 1719, 1743, 2133
MunI CAATTG 1 cut(s) 2430
Mva1269I GAATGC 1 cut(s) 1360
MvaI CCWGG 3 cut(s) 1719, 1743, 2133
MwoI GCNNNNNNNGC 3 cut(s) 1115, 1140, 2187
NcoI CCATGG 2 cut(s) 610, 683
NlaIV GGNNCC 9 cut(s) 186, 339, 483, 489, 711, 930, 1117, 1213, 2466
NmeAIII GCCGAG 5 cut(s) 1188, 1537, 1798, 2172, 2391
NmuCI GTSAC 3 cut(s) 527, 1361, 1790
NspI RCATGY 2 cut(s) 1013, 1134
PaqCI CACCTGC 2 cut(s) 1100, 1349
PceI AGGCCT 2 cut(s) 739, 2053
PcsI WCGNNNNNNNCGW 1 cut(s) 570
PctI GAATGC 1 cut(s) 1360
PdmI GAANNNNTTC 1 cut(s) 486
PflMI CCANNNNNTGG 1 cut(s) 2038
PinAI ACCGGT 2 cut(s) 484, 2261
PkrI GCNGC 7 cut(s) 513, 558, 654, 866, 1328, 1740, 2251
PleI GAGTC 5 cut(s) 64, 353, 1705, 1916, 2381
PmaCI CACGTG 1 cut(s) 992
PmlI CACGTG 1 cut(s) 992
PpsI GAGTC 5 cut(s) 64, 353, 1705, 1916, 2381
Ppu21I YACGTR 2 cut(s) 277, 992
PpuMI RGGWCCY 2 cut(s) 1487, 2464
PshBI ATTAAT 1 cut(s) 945
PsiI TTATAA 1 cut(s) 999
Psp124BI GAGCTC 1 cut(s) 2009
Psp5II RGGWCCY 2 cut(s) 1487, 2464
Psp6I CCWGG 3 cut(s) 1717, 1741, 2131
PspCI CACGTG 1 cut(s) 992
PspEI GGTNACC 1 cut(s) 527
PspFI CCCAGC 1 cut(s) 203
PspGI CCWGG 3 cut(s) 1717, 1741, 2131
PspN4I GGNNCC 9 cut(s) 186, 339, 483, 489, 711, 930, 1117, 1213, 2466
PspPI GGNCC 9 cut(s) 184, 232, 338, 614, 1487, 2120, 2179, 2305, 2464
PspPPI RGGWCCY 2 cut(s) 1487, 2464
PstI CTGCAG 2 cut(s) 1206, 1930
PstNI CAGNNNCTG 2 cut(s) 1456, 1794
PsuI RGATCY 4 cut(s) 409, 452, 709, 1948
RsaI GTAC 2 cut(s) 373, 544
RsaNI GTAC 2 cut(s) 372, 543
SacI GAGCTC 1 cut(s) 2009
SaqAI TTAA 8 cut(s) 8, 191, 945, 1319, 1334, 1902, 2067, 2402
SatI GCNGC 7 cut(s) 512, 557, 653, 865, 1327, 1739, 2250
Sau96I GGNCC 9 cut(s) 184, 232, 338, 614, 1487, 2120, 2179, 2305, 2464
SchI GAGTC 5 cut(s) 65, 353, 1706, 1916, 2381
ScrFI CCNGG 3 cut(s) 1719, 1743, 2133
SduI GDGCHC 4 cut(s) 284, 298, 1120, 2009
SfaNI GCATC 2 cut(s) 543, 688
SfcI CTRYAG 4 cut(s) 156, 1104, 1202, 1926
SinI GGWCC 5 cut(s) 232, 614, 1487, 2305, 2464
SseBI AGGCCT 2 cut(s) 739, 2053
SsiI CCGC 5 cut(s) 407, 512, 846, 902, 1065
SspMI CTAG 2 cut(s) 1014, 2010
SstI GAGCTC 1 cut(s) 2009
StuI AGGCCT 2 cut(s) 739, 2053
StyD4I CCNGG 3 cut(s) 1717, 1741, 2131
StyI CCWWGG 6 cut(s) 476, 610, 683, 1515, 1620, 2032
TaaI ACNGT 5 cut(s) 447, 1225, 1762, 1790, 2059
TaiI ACGT 4 cut(s) 141, 279, 994, 1668
TaqI TCGA 9 cut(s) 59, 241, 403, 551, 922, 1496, 1837, 2128, 2358
TatI WGTACW 1 cut(s) 542
TauI GCSGC 1 cut(s) 514
Tru1I TTAA 8 cut(s) 8, 191, 945, 1319, 1334, 1902, 2067, 2402
Tru9I TTAA 8 cut(s) 8, 191, 945, 1319, 1334, 1902, 2067, 2402
TscAI CASTG 4 cut(s) 216, 1211, 1795, 1869
TseFI GTSAC 3 cut(s) 527, 1361, 1790
TseI GCWGC 6 cut(s) 556, 652, 864, 1326, 1738, 2249
Tsp45I GTSAC 3 cut(s) 527, 1361, 1790
TspGWI ACGGA 4 cut(s) 644, 702, 748, 1600
TspRI CASTG 4 cut(s) 216, 1211, 1795, 1869
Van91I CCANNNNNTGG 1 cut(s) 2038
VpaK11BI GGWCC 5 cut(s) 232, 614, 1487, 2305, 2464
VspI ATTAAT 1 cut(s) 945
XagI CCTNNNNNAGG 1 cut(s) 1107
XapI RAATTY 9 cut(s) 196, 388, 785, 806, 952, 1574, 1843, 2219, 2345
XbaI TCTAGA 1 cut(s) 2009
XceI RCATGY 2 cut(s) 1013, 1134
XmiI GTMKAC 1 cut(s) 357
XmnI GAANNNNTTC 1 cut(s) 486
XspI CTAG 2 cut(s) 1014, 2010
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.