pycom06g09910

KAT8 regulatory NSL complex subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Reverse (-)
15219230 .. 15221061
1832 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 432 bp
ATGCCTTCATCACCGCCGTCAAAGCGCAGGCGAAGGAACCAGAGCAAAGACGAAACAGATAACCCGACAGCTGCATCTTCGTCCGCACTGGAGAAAGTATCCCTGTGGTGGTCTTTGCGCATGGTGCAGAATTTCCTTTTCTTTCTATATGTTATCACTTTACAAAGTTGTTACTACCATTTTATACGAGCTGCTTTCTTATGTTCTGCATCTCTTACATTTTTCGGGTTTGTATGCTACAATTACGCTTTTAGTAAAGATGGGCTTTGTCCATTGGAAAAGCTAGAAACTACTCGCAAGAAGATGAAATGCCTTAGTGATTTGCATGTCATTGATGGTGGCGGTCACTCCTTCAGGATTGGAAAGAAACATCTGCAAACCACTGGGTTATCCCAAGACGAAGCTGAAAATCTTGCTCTTCGAGCCATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

144

Amino Acids

16.28

Weight (kDa)

9.32

Isoelectric Point (pI)

65.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 119
AciI CCGC 3 cut(s) 14, 84, 342
AcsI RAATTY 1 cut(s) 130
AcuI CTGAAG 1 cut(s) 337
AfiI CCNNNNNNNGG 1 cut(s) 108
AluBI AGCT 4 cut(s) 71, 191, 283, 404
AluI AGCT 4 cut(s) 71, 191, 283, 404
ApeKI GCWGC 2 cut(s) 71, 191
ApoI RAATTY 1 cut(s) 130
AspLEI GCGC 2 cut(s) 27, 120
AsuHPI GGTGA 1 cut(s) 3
BbvI GCAGC 2 cut(s) 58, 178
BccI CCATC 2 cut(s) 254, 329
BciVI GTATCC 1 cut(s) 109
BfaI CTAG 1 cut(s) 284
BfuI GTATCC 1 cut(s) 109
BisI GCNGC 2 cut(s) 72, 192
BlsI GCNGC 2 cut(s) 73, 193
BmiI GGNNCC 1 cut(s) 38
BmrI ACTGGG 1 cut(s) 393
BmsI GCATC 2 cut(s) 83, 218
BmuI ACTGGG 1 cut(s) 393
BpmI CTGGAG 1 cut(s) 110
Bsc4I CCNNNNNNNGG 1 cut(s) 108
Bse1I ACTGG 2 cut(s) 93, 388
BseLI CCNNNNNNNGG 1 cut(s) 108
BseNI ACTGG 2 cut(s) 93, 388
BseXI GCAGC 2 cut(s) 58, 178
BsgI GTGCAG 1 cut(s) 146
BslI CCNNNNNNNGG 1 cut(s) 108
BspACI CCGC 3 cut(s) 14, 84, 342
BspLI GGNNCC 1 cut(s) 38
BspQI GCTCTTC 1 cut(s) 423
BsrI ACTGG 2 cut(s) 93, 388
Bst6I CTCTTC 1 cut(s) 423
BstC8I GCNNGC 1 cut(s) 29
BstDEI CTNAG 1 cut(s) 314
BstHHI GCGC 2 cut(s) 27, 120
BstMWI GCNNNNNNNGC 3 cut(s) 22, 124, 422
BstNSI RCATGY 1 cut(s) 329
BstV1I GCAGC 2 cut(s) 58, 178
BsuI GTATCC 1 cut(s) 109
BtsIMutI CAGTG 2 cut(s) 86, 381
Cac8I GCNNGC 1 cut(s) 29
CfoI GCGC 2 cut(s) 27, 120
CviAII CATG 2 cut(s) 121, 326
CviJI RGCY 6 cut(s) 71, 191, 265, 283, 404, 425
CviKI_1 RGCY 6 cut(s) 71, 191, 265, 283, 404, 425
DdeI CTNAG 1 cut(s) 314
Eam1104I CTCTTC 1 cut(s) 423
EarI CTCTTC 1 cut(s) 423
Eco57I CTGAAG 1 cut(s) 337
FaeI CATG 2 cut(s) 124, 329
FaiI YATR 9 cut(s) 122, 148, 150, 185, 202, 235, 327, 428, 430
FalI AAGNNNNNCTT 2 cut(s) 249, 281
FatI CATG 2 cut(s) 120, 325
Fnu4HI GCNGC 2 cut(s) 72, 192
Fsp4HI GCNGC 2 cut(s) 72, 192
FspBI CTAG 1 cut(s) 284
FspI TGCGCA 1 cut(s) 119
GlaI GCGC 2 cut(s) 26, 119
GluI GCNGC 2 cut(s) 72, 192
GsuI CTGGAG 1 cut(s) 110
HhaI GCGC 2 cut(s) 27, 120
Hin1II CATG 2 cut(s) 124, 329
Hin6I GCGC 2 cut(s) 25, 118
HinP1I GCGC 2 cut(s) 25, 118
HphI GGTGA 1 cut(s) 3
Hpy188III TCNNGA 1 cut(s) 355
HpyAV CCTTC 3 cut(s) 15, 27, 361
HpyCH4V TGCA 5 cut(s) 74, 127, 209, 325, 376
HpyF10VI GCNNNNNNNGC 3 cut(s) 22, 124, 422
HpyF3I CTNAG 1 cut(s) 314
Hsp92II CATG 2 cut(s) 124, 329
HspAI GCGC 2 cut(s) 25, 118
LguI GCTCTTC 1 cut(s) 423
LpnPI CCDG 6 cut(s) 13, 53, 74, 116, 340, 369
Lsp1109I GCAGC 2 cut(s) 58, 178
LweI GCATC 2 cut(s) 83, 218
MaeI CTAG 1 cut(s) 284
MaeIII GTNAC 2 cut(s) 170, 344
MboII GAAGA 3 cut(s) 69, 313, 410
MluCI AATT 2 cut(s) 130, 241
MspA1I CMGCKG 1 cut(s) 71
MwoI GCNNNNNNNGC 3 cut(s) 22, 124, 422
NlaIII CATG 2 cut(s) 124, 329
NlaIV GGNNCC 1 cut(s) 38
NmuCI GTSAC 1 cut(s) 344
NsbI TGCGCA 1 cut(s) 119
NspI RCATGY 1 cut(s) 329
PciSI GCTCTTC 1 cut(s) 423
PkrI GCNGC 2 cut(s) 73, 193
PspN4I GGNNCC 1 cut(s) 38
PvuII CAGCTG 1 cut(s) 71
SapI GCTCTTC 1 cut(s) 423
SatI GCNGC 2 cut(s) 72, 192
SetI ASST 4 cut(s) 73, 193, 285, 406
SfaNI GCATC 2 cut(s) 83, 218
Sse9I AATT 2 cut(s) 130, 241
SsiI CCGC 3 cut(s) 14, 84, 342
SspMI CTAG 1 cut(s) 284
TaqI TCGA 1 cut(s) 421
TasI AATT 2 cut(s) 130, 241
TscAI CASTG 2 cut(s) 93, 388
TseFI GTSAC 1 cut(s) 344
TseI GCWGC 2 cut(s) 71, 191
Tsp45I GTSAC 1 cut(s) 344
TspDTI ATGAA 1 cut(s) 320
TspRI CASTG 2 cut(s) 93, 388
XapI RAATTY 1 cut(s) 130
XceI RCATGY 1 cut(s) 329
XspI CTAG 1 cut(s) 284
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.