WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G50970 |
| fragaria_vesca | FvH4_5g09480 |
| malus_domestica | MD06G1130900.v1.1 MD14G1147500.v1.1 |
| prunus_persica | Prupe.5G142100_v2.0.a1 Prupe.5G142100_v2.0.a1 Prupe.5G142100_v2.0.a1 Prupe.5G142100_v2.0.a1 Prupe.5G142100_v2.0.a1 Prupe.5G142100_v2.0.a1 |
| pyrus_communis | pycom06g12250 pycom14g12220 |
| rosa_chinensis | RchiOBHm_Chr1g0373351 RchiOBHm_Chr7g0188721 |
| rosa_laevigata | RLG00000004667 |
| rosa_multiflora | Rmu_sc0003854.1_g000005 |
| rosa_roxburghii | Rroxscaffold_3G00266100 |
| rosa_rugosa | Rorug06G0493100 |
| rosa_samantha | Rh2BG475900 Rh2DG440100 Rh2DG484600 Rh7AG097900 Rh7DG099700 |
| rosa_wichuraiana | Rw7G008430 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1097 |
| Acc65I | GGTACC | 1 cut(s) | 1496 |
| AccB1I | GGYRCC | 1 cut(s) | 1496 |
| AccBSI | CCGCTC | 1 cut(s) | 1223 |
| AccII | CGCG | 2 cut(s) | 165, 189 |
| AciI | CCGC | 9 cut(s) | 51, 54, 86, 163, 181, 187, 303, 1118, 1223 |
| AclWI | GGATC | 2 cut(s) | 1031, 1507 |
| AcoI | YGGCCR | 1 cut(s) | 869 |
| AcsI | RAATTY | 2 cut(s) | 559, 608 |
| AcuI | CTGAAG | 1 cut(s) | 32 |
| AcyI | GRCGYC | 1 cut(s) | 268 |
| AfaI | GTAC | 1 cut(s) | 1498 |
| AfeI | AGCGCT | 1 cut(s) | 7 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 308, 861 |
| AgsI | TTSAA | 8 cut(s) | 567, 581, 587, 614, 1001, 1343, 1588, 1642 |
| AjnI | CCWGG | 2 cut(s) | 884, 1463 |
| AluBI | AGCT | 8 cut(s) | 134, 211, 470, 657, 757, 1366, 1448, 1592 |
| AluI | AGCT | 8 cut(s) | 134, 211, 470, 657, 757, 1366, 1448, 1592 |
| Alw21I | GWGCWC | 2 cut(s) | 490, 1570 |
| Alw26I | GTCTC | 3 cut(s) | 196, 1103, 1473 |
| AlwI | GGATC | 2 cut(s) | 1031, 1507 |
| Aor51HI | AGCGCT | 1 cut(s) | 7 |
| AoxI | GGCC | 2 cut(s) | 869, 1461 |
| ApeKI | GCWGC | 2 cut(s) | 65, 1363 |
| ApoI | RAATTY | 2 cut(s) | 559, 608 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 621, 653 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 562, 730 |
| Asp718I | GGTACC | 1 cut(s) | 1496 |
| AspLEI | GCGC | 2 cut(s) | 8, 336 |
| AsuC2I | CCSGG | 1 cut(s) | 1186 |
| AsuHPI | GGTGA | 2 cut(s) | 88, 291 |
| BaeGI | GKGCMC | 1 cut(s) | 743 |
| BalI | TGGCCA | 1 cut(s) | 871 |
| BanI | GGYRCC | 1 cut(s) | 1496 |
| Bbv12I | GWGCWC | 2 cut(s) | 490, 1570 |
| BbvI | GCAGC | 2 cut(s) | 77, 1375 |
| BccI | CCATC | 7 cut(s) | 76, 444, 508, 773, 861, 890, 923 |
| BceAI | ACGGC | 3 cut(s) | 64, 115, 1492 |
| BciT130I | CCWGG | 2 cut(s) | 886, 1465 |
| BciVI | GTATCC | 2 cut(s) | 862, 1051 |
| BclI | TGATCA | 2 cut(s) | 751, 1084 |
| BcnI | CCSGG | 1 cut(s) | 1186 |
| BcoDI | GTCTC | 3 cut(s) | 196, 1103, 1473 |
| BfaI | CTAG | 9 cut(s) | 291, 306, 375, 459, 483, 510, 654, 819, 956 |
| BfoI | RGCGCY | 1 cut(s) | 9 |
| BfuI | GTATCC | 2 cut(s) | 862, 1051 |
| BglII | AGATCT | 1 cut(s) | 958 |
| BisI | GCNGC | 4 cut(s) | 52, 55, 66, 1364 |
| BlsI | GCNGC | 4 cut(s) | 53, 56, 67, 1365 |
| Bme1390I | CCNGG | 3 cut(s) | 886, 1186, 1465 |
| BmiI | GGNNCC | 2 cut(s) | 1498, 1601 |
| BmrFI | CCNGG | 3 cut(s) | 886, 1186, 1465 |
| BmrI | ACTGGG | 1 cut(s) | 737 |
| BmsI | GCATC | 6 cut(s) | 163, 394, 898, 1105, 1237, 1285 |
| BmuI | ACTGGG | 1 cut(s) | 737 |
| BpmI | CTGGAG | 2 cut(s) | 456, 1455 |
| BpuEI | CTTGAG | 2 cut(s) | 474, 685 |
| BpuMI | CCSGG | 1 cut(s) | 1186 |
| Bsa29I | ATCGAT | 2 cut(s) | 1455, 1507 |
| BsaAI | YACGTR | 1 cut(s) | 1665 |
| BsaHI | GRCGYC | 1 cut(s) | 268 |
| BsaI | GGTCTC | 1 cut(s) | 1473 |
| BsaJI | CCNNGG | 2 cut(s) | 810, 1049 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 176, 206 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 308, 861 |
| Bse1I | ACTGG | 4 cut(s) | 473, 743, 768, 1078 |
| Bse3DI | GCAATG | 1 cut(s) | 1142 |
| BseBI | CCWGG | 2 cut(s) | 886, 1465 |
| BseCI | ATCGAT | 2 cut(s) | 1455, 1507 |
| BseDI | CCNNGG | 2 cut(s) | 810, 1049 |
| BseGI | GGATG | 4 cut(s) | 436, 889, 1120, 1194 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 308, 861 |
| BseMI | GCAATG | 1 cut(s) | 1142 |
| BseMII | CTCAG | 4 cut(s) | 221, 1379, 1454, 1568 |
| BseNI | ACTGG | 4 cut(s) | 473, 743, 768, 1078 |
| BseRI | GAGGAG | 2 cut(s) | 104, 107 |
| BseSI | GKGCMC | 1 cut(s) | 743 |
| BseXI | GCAGC | 2 cut(s) | 77, 1375 |
| Bsh1236I | CGCG | 2 cut(s) | 165, 189 |
| BshFI | GGCC | 2 cut(s) | 871, 1463 |
| BshNI | GGYRCC | 1 cut(s) | 1496 |
| BshVI | ATCGAT | 2 cut(s) | 1455, 1507 |
| BsiHKAI | GWGCWC | 2 cut(s) | 490, 1570 |
| BsiSI | CCGG | 2 cut(s) | 1185, 1218 |
| BslFI | GGGAC | 4 cut(s) | 557, 610, 623, 1363 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 308, 861 |
| BsmAI | GTCTC | 3 cut(s) | 196, 1103, 1473 |
| BsmBI | CGTCTC | 2 cut(s) | 196, 1103 |
| BsmFI | GGGAC | 4 cut(s) | 557, 610, 623, 1363 |
| BsmI | GAATGC | 1 cut(s) | 1159 |
| BsnI | GGCC | 2 cut(s) | 871, 1463 |
| Bso31I | GGTCTC | 1 cut(s) | 1473 |
| Bsp1286I | GDGCHC | 3 cut(s) | 490, 743, 1570 |
| BspACI | CCGC | 9 cut(s) | 51, 54, 86, 163, 181, 187, 303, 1118, 1223 |
| BspANI | GGCC | 2 cut(s) | 871, 1463 |
| BspCNI | CTCAG | 4 cut(s) | 220, 1380, 1453, 1567 |
| BspDI | ATCGAT | 2 cut(s) | 1455, 1507 |
| BspFNI | CGCG | 2 cut(s) | 165, 189 |
| BspLI | GGNNCC | 2 cut(s) | 1498, 1601 |
| BspPI | GGATC | 2 cut(s) | 1031, 1507 |
| BspQI | GCTCTTC | 1 cut(s) | 1255 |
| BspT107I | GGYRCC | 1 cut(s) | 1496 |
| BspTNI | GGTCTC | 1 cut(s) | 1473 |
| BsrBI | CCGCTC | 1 cut(s) | 1223 |
| BsrDI | GCAATG | 1 cut(s) | 1142 |
| BsrI | ACTGG | 4 cut(s) | 473, 743, 768, 1078 |
| BssECI | CCNNGG | 2 cut(s) | 810, 1049 |
| BssNI | GRCGYC | 1 cut(s) | 268 |
| BssT1I | CCWWGG | 2 cut(s) | 810, 1049 |
| Bst2UI | CCWGG | 2 cut(s) | 886, 1465 |
| Bst4CI | ACNGT | 2 cut(s) | 368, 448 |
| Bst6I | CTCTTC | 3 cut(s) | 221, 1255, 1337 |
| BstACI | GRCGYC | 1 cut(s) | 268 |
| BstBAI | YACGTR | 1 cut(s) | 1665 |
| BstC8I | GCNNGC | 1 cut(s) | 688 |
| BstDEI | CTNAG | 5 cut(s) | 207, 833, 1388, 1440, 1554 |
| BstF5I | GGATG | 4 cut(s) | 436, 889, 1120, 1194 |
| BstFNI | CGCG | 2 cut(s) | 165, 189 |
| BstH2I | RGCGCY | 1 cut(s) | 9 |
| BstHHI | GCGC | 2 cut(s) | 8, 336 |
| BstMAI | GTCTC | 3 cut(s) | 196, 1103, 1473 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 140, 687, 1360 |
| BstNI | CCWGG | 2 cut(s) | 886, 1465 |
| BstSCI | CCNGG | 3 cut(s) | 884, 1184, 1463 |
| BstSLI | GKGCMC | 1 cut(s) | 743 |
| BstUI | CGCG | 2 cut(s) | 165, 189 |
| BstV1I | GCAGC | 2 cut(s) | 77, 1375 |
| BstX2I | RGATCY | 1 cut(s) | 958 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1412 |
| BstYI | RGATCY | 1 cut(s) | 958 |
| Bsu15I | ATCGAT | 2 cut(s) | 1455, 1507 |
| BsuI | GTATCC | 2 cut(s) | 862, 1051 |
| BsuRI | GGCC | 2 cut(s) | 871, 1463 |
| BsuTUI | ATCGAT | 2 cut(s) | 1455, 1507 |
| BtgZI | GCGATG | 1 cut(s) | 140 |
| BtsCI | GGATG | 4 cut(s) | 436, 889, 1120, 1194 |
| BtsI | GCAGTG | 2 cut(s) | 1087, 1438 |
| BtsIMutI | CAGTG | 5 cut(s) | 750, 775, 1071, 1087, 1438 |
| Cac8I | GCNNGC | 1 cut(s) | 688 |
| CfoI | GCGC | 2 cut(s) | 8, 336 |
| ClaI | ATCGAT | 2 cut(s) | 1455, 1507 |
| CseI | GACGC | 3 cut(s) | 178, 276, 1360 |
| Csp6I | GTAC | 1 cut(s) | 1497 |
| CviAII | CATG | 8 cut(s) | 666, 1013, 1088, 1297, 1336, 1355, 1406, 1608 |
| CviQI | GTAC | 1 cut(s) | 1497 |
| DdeI | CTNAG | 5 cut(s) | 207, 833, 1388, 1440, 1554 |
| DraI | TTTAAA | 1 cut(s) | 360 |
| EaeI | YGGCCR | 1 cut(s) | 869 |
| Eam1104I | CTCTTC | 3 cut(s) | 221, 1255, 1337 |
| EarI | CTCTTC | 3 cut(s) | 221, 1255, 1337 |
| EciI | GGCGGA | 1 cut(s) | 101 |
| Eco130I | CCWWGG | 2 cut(s) | 810, 1049 |
| Eco147I | AGGCCT | 1 cut(s) | 1463 |
| Eco31I | GGTCTC | 1 cut(s) | 1473 |
| Eco32I | GATATC | 2 cut(s) | 1381, 1528 |
| Eco47III | AGCGCT | 1 cut(s) | 7 |
| Eco57I | CTGAAG | 1 cut(s) | 32 |
| EcoRII | CCWGG | 2 cut(s) | 884, 1463 |
| EcoRV | GATATC | 2 cut(s) | 1381, 1528 |
| EcoT14I | CCWWGG | 2 cut(s) | 810, 1049 |
| EcoT22I | ATGCAT | 2 cut(s) | 1161, 1298 |
| ErhI | CCWWGG | 2 cut(s) | 810, 1049 |
| Esp3I | CGTCTC | 2 cut(s) | 196, 1103 |
| FaeI | CATG | 8 cut(s) | 669, 1016, 1091, 1300, 1339, 1358, 1409, 1611 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 718, 750 |
| FaqI | GGGAC | 4 cut(s) | 557, 610, 623, 1363 |
| FatI | CATG | 8 cut(s) | 665, 1012, 1087, 1296, 1335, 1354, 1405, 1607 |
| FauI | CCCGC | 2 cut(s) | 170, 310 |
| FbaI | TGATCA | 2 cut(s) | 751, 1084 |
| Fnu4HI | GCNGC | 4 cut(s) | 52, 55, 66, 1364 |
| FokI | GGATG | 4 cut(s) | 423, 876, 1127, 1201 |
| Fsp4HI | GCNGC | 4 cut(s) | 52, 55, 66, 1364 |
| FspBI | CTAG | 9 cut(s) | 291, 306, 375, 459, 483, 510, 654, 819, 956 |
| GlaI | GCGC | 2 cut(s) | 7, 335 |
| GluI | GCNGC | 4 cut(s) | 52, 55, 66, 1364 |
| GsuI | CTGGAG | 2 cut(s) | 456, 1455 |
| HaeII | RGCGCY | 1 cut(s) | 9 |
| HaeIII | GGCC | 2 cut(s) | 871, 1463 |
| HapII | CCGG | 2 cut(s) | 1185, 1218 |
| HgaI | GACGC | 3 cut(s) | 178, 276, 1360 |
| HhaI | GCGC | 2 cut(s) | 8, 336 |
| Hin1I | GRCGYC | 1 cut(s) | 268 |
| Hin1II | CATG | 8 cut(s) | 669, 1016, 1091, 1300, 1339, 1358, 1409, 1611 |
| Hin6I | GCGC | 2 cut(s) | 6, 334 |
| HinP1I | GCGC | 2 cut(s) | 6, 334 |
| HincII | GTYRAC | 3 cut(s) | 234, 288, 790 |
| HindII | GTYRAC | 3 cut(s) | 234, 288, 790 |
| HinfI | GANTC | 2 cut(s) | 938, 1436 |
| HpaI | GTTAAC | 1 cut(s) | 234 |
| HpaII | CCGG | 2 cut(s) | 1185, 1218 |
| HphI | GGTGA | 2 cut(s) | 88, 291 |
| Hpy166II | GTNNAC | 7 cut(s) | 172, 234, 288, 299, 649, 790, 1652 |
| Hpy188I | TCNGA | 9 cut(s) | 12, 147, 1281, 1370, 1385, 1452, 1532, 1575, 1636 |
| Hpy188III | TCNNGA | 6 cut(s) | 375, 587, 893, 956, 1102, 1472 |
| Hpy8I | GTNNAC | 7 cut(s) | 172, 234, 288, 299, 649, 790, 1652 |
| Hpy99I | CGWCG | 1 cut(s) | 270 |
| HpyAV | CCTTC | 2 cut(s) | 1560, 1625 |
| HpyCH4III | ACNGT | 2 cut(s) | 368, 448 |
| HpyCH4IV | ACGT | 2 cut(s) | 33, 1664 |
| HpyCH4V | TGCA | 3 cut(s) | 1147, 1159, 1296 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 140, 687, 1360 |
| HpyF3I | CTNAG | 5 cut(s) | 207, 833, 1388, 1440, 1554 |
| HpySE526I | ACGT | 2 cut(s) | 33, 1664 |
| Hsp92I | GRCGYC | 1 cut(s) | 268 |
| Hsp92II | CATG | 8 cut(s) | 669, 1016, 1091, 1300, 1339, 1358, 1409, 1611 |
| HspAI | GCGC | 2 cut(s) | 6, 334 |
| KpnI | GGTACC | 1 cut(s) | 1500 |
| Ksp22I | TGATCA | 2 cut(s) | 751, 1084 |
| KspAI | GTTAAC | 1 cut(s) | 234 |
| LguI | GCTCTTC | 1 cut(s) | 1255 |
| LmnI | GCTCC | 5 cut(s) | 331, 475, 1220, 1371, 1605 |
| Lsp1109I | GCAGC | 2 cut(s) | 77, 1375 |
| LweI | GCATC | 6 cut(s) | 163, 394, 898, 1105, 1237, 1285 |
| MaeI | CTAG | 9 cut(s) | 291, 306, 375, 459, 483, 510, 654, 819, 956 |
| MaeII | ACGT | 2 cut(s) | 33, 1664 |
| MaeIII | GTNAC | 5 cut(s) | 692, 763, 988, 1069, 1319 |
| MbiI | CCGCTC | 1 cut(s) | 1223 |
| MflI | RGATCY | 1 cut(s) | 958 |
| MhlI | GDGCHC | 3 cut(s) | 490, 743, 1570 |
| MlsI | TGGCCA | 1 cut(s) | 871 |
| MluCI | AATT | 6 cut(s) | 246, 478, 559, 608, 632, 1233 |
| MluNI | TGGCCA | 1 cut(s) | 871 |
| MlyI | GAGTC | 1 cut(s) | 932 |
| MmeI | TCCRAC | 1 cut(s) | 1393 |
| MnlI | CCTC | 9 cut(s) | 22, 82, 85, 188, 222, 1011, 1020, 1048, 1383 |
| Mox20I | TGGCCA | 1 cut(s) | 871 |
| Mph1103I | ATGCAT | 2 cut(s) | 1161, 1298 |
| MroXI | GAANNNNTTC | 2 cut(s) | 562, 730 |
| MscI | TGGCCA | 1 cut(s) | 871 |
| MseI | TTAA | 7 cut(s) | 233, 249, 359, 477, 1029, 1272, 1326 |
| MslI | CAYNNNNRTG | 2 cut(s) | 360, 894 |
| Msp20I | TGGCCA | 1 cut(s) | 871 |
| MspI | CCGG | 2 cut(s) | 1185, 1218 |
| MspR9I | CCNGG | 3 cut(s) | 886, 1186, 1465 |
| Mva1269I | GAATGC | 1 cut(s) | 1159 |
| MvaI | CCWGG | 2 cut(s) | 886, 1465 |
| MvnI | CGCG | 2 cut(s) | 165, 189 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 140, 687, 1360 |
| NciI | CCSGG | 1 cut(s) | 1186 |
| NlaIII | CATG | 8 cut(s) | 669, 1016, 1091, 1300, 1339, 1358, 1409, 1611 |
| NlaIV | GGNNCC | 2 cut(s) | 1498, 1601 |
| NmeAIII | GCCGAG | 1 cut(s) | 808 |
| NmuCI | GTSAC | 4 cut(s) | 692, 763, 1069, 1319 |
| NsiI | ATGCAT | 2 cut(s) | 1161, 1298 |
| PceI | AGGCCT | 1 cut(s) | 1463 |
| PciSI | GCTCTTC | 1 cut(s) | 1255 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 54 |
| PctI | GAATGC | 1 cut(s) | 1159 |
| PdmI | GAANNNNTTC | 2 cut(s) | 562, 730 |
| PfeI | GAWTC | 1 cut(s) | 1436 |
| PkrI | GCNGC | 4 cut(s) | 53, 56, 67, 1365 |
| PleI | GAGTC | 1 cut(s) | 932 |
| PpsI | GAGTC | 1 cut(s) | 932 |
| Ppu21I | YACGTR | 1 cut(s) | 1665 |
| PsiI | TTATAA | 1 cut(s) | 1097 |
| Psp6I | CCWGG | 2 cut(s) | 884, 1463 |
| PspGI | CCWGG | 2 cut(s) | 884, 1463 |
| PspN4I | GGNNCC | 2 cut(s) | 1498, 1601 |
| PsuI | RGATCY | 1 cut(s) | 958 |
| RsaI | GTAC | 1 cut(s) | 1498 |
| RsaNI | GTAC | 1 cut(s) | 1497 |
| RseI | CAYNNNNRTG | 2 cut(s) | 360, 894 |
| SapI | GCTCTTC | 1 cut(s) | 1255 |
| SaqAI | TTAA | 7 cut(s) | 233, 249, 359, 477, 1029, 1272, 1326 |
| SatI | GCNGC | 4 cut(s) | 52, 55, 66, 1364 |
| SchI | GAGTC | 1 cut(s) | 932 |
| ScrFI | CCNGG | 3 cut(s) | 886, 1186, 1465 |
| SduI | GDGCHC | 3 cut(s) | 490, 743, 1570 |
| SfaNI | GCATC | 6 cut(s) | 163, 394, 898, 1105, 1237, 1285 |
| SmiI | ATTTAAAT | 1 cut(s) | 360 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 360, 894 |
| SmlI | CTYRAG | 2 cut(s) | 489, 700 |
| SmoI | CTYRAG | 2 cut(s) | 489, 700 |
| Sse9I | AATT | 6 cut(s) | 246, 478, 559, 608, 632, 1233 |
| SseBI | AGGCCT | 1 cut(s) | 1463 |
| SsiI | CCGC | 9 cut(s) | 51, 54, 86, 163, 181, 187, 303, 1118, 1223 |
| SspMI | CTAG | 9 cut(s) | 291, 306, 375, 459, 483, 510, 654, 819, 956 |
| StuI | AGGCCT | 1 cut(s) | 1463 |
| StyD4I | CCNGG | 3 cut(s) | 884, 1184, 1463 |
| StyI | CCWWGG | 2 cut(s) | 810, 1049 |
| SwaI | ATTTAAAT | 1 cut(s) | 360 |
| TaaI | ACNGT | 2 cut(s) | 368, 448 |
| TaiI | ACGT | 2 cut(s) | 36, 1667 |
| TaqI | TCGA | 7 cut(s) | 150, 259, 265, 392, 1455, 1507, 1524 |
| TasI | AATT | 6 cut(s) | 246, 478, 559, 608, 632, 1233 |
| TauI | GCSGC | 2 cut(s) | 54, 57 |
| TfiI | GAWTC | 1 cut(s) | 1436 |
| Tru1I | TTAA | 7 cut(s) | 233, 249, 359, 477, 1029, 1272, 1326 |
| Tru9I | TTAA | 7 cut(s) | 233, 249, 359, 477, 1029, 1272, 1326 |
| TscAI | CASTG | 5 cut(s) | 750, 775, 1078, 1087, 1438 |
| TseFI | GTSAC | 4 cut(s) | 692, 763, 1069, 1319 |
| TseI | GCWGC | 2 cut(s) | 65, 1363 |
| Tsp45I | GTSAC | 4 cut(s) | 692, 763, 1069, 1319 |
| TspDTI | ATGAA | 4 cut(s) | 397, 551, 1152, 1324 |
| TspGWI | ACGGA | 3 cut(s) | 41, 619, 1127 |
| TspRI | CASTG | 5 cut(s) | 750, 775, 1078, 1087, 1438 |
| XapI | RAATTY | 2 cut(s) | 559, 608 |
| XbaI | TCTAGA | 2 cut(s) | 374, 955 |
| XmnI | GAANNNNTTC | 2 cut(s) | 562, 730 |
| XspI | CTAG | 9 cut(s) | 291, 306, 375, 459, 483, 510, 654, 819, 956 |
| Zsp2I | ATGCAT | 2 cut(s) | 1161, 1298 |